FFCP PHASE1:Hg19::chr20:49347538..49347547,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:49347538..49347547,- | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_at_chr20:49347538..49347547,- | |description=CAGE_peak_at_chr20:49347538..49347547,- | ||
|id=chr20:49347538..49347547,- | |id=chr20:49347538..49347547,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000239;4.09e-23;3!CL:1000615;4.09e-23;3!CL:0002306;4.09e-23;3!CL:1000507;6.56e-08;10!CL:1000494;6.56e-08;10!CL:0002681;8.38e-07;12!CL:0002584;8.38e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.09e-23,3;CL:1000615,4.09e-23,3;CL:0002306,4.09e-23,3;CL:1000507,6.56e-08,10;CL:1000494,6.56e-08,10;CL:0002681,8.38e-07,12;CL:0002584,8.38e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!1.50e-08!4;DOID:1612!1.50e-08!4 | |ontology_enrichment_disease=DOID:5093!1.50e-08!4;DOID:1612!1.50e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.40e-66;4!DOID:1612;2.40e-66;4!DOID:299;1.03e-11;25!DOID:7;2.44e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.40e-66,4;DOID:1612,2.40e-66,4;DOID:299,1.03e-11,25;DOID:7,6.60e-08,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.08e-27;10!UBERON:0001443;4.86e-25;11!UBERON:0006853;4.09e-23;3!UBERON:0007685;4.09e-23;3!UBERON:0004134;4.09e-23;3!UBERON:0004211;6.56e-08;10!UBERON:0009773;6.56e-08;10!UBERON:0001231;6.56e-08;10!UBERON:0004810;6.56e-08;10!UBERON:0000915;4.34e-07;52!UBERON:0001225;8.38e-07;12!UBERON:0008987;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.08e-27,10;UBERON:0001443,4.86e-25,11;UBERON:0006853,4.09e-23,3;UBERON:0007685,4.09e-23,3;UBERON:0004134,4.09e-23,3;UBERON:0004810,6.56e-08,10;UBERON:0001225,8.38e-07,12;UBERON:0008987,8.38e-07,12 | |||
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| ||
|short_description=p@chr20:49347538..49347547,- | |short_description=p@chr20:49347538..49347547,- | ||
}} | }} |
Latest revision as of 15:16, 28 July 2015
Short description: | p@chr20:49347538..49347547, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:49347538..49347547, - |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.09e-23 | 3 |
kidney cortex tubule cell | 4.09e-23 | 3 |
epithelial cell of proximal tubule | 4.09e-23 | 3 |
kidney tubule cell | 6.56e-08 | 10 |
nephron tubule epithelial cell | 6.56e-08 | 10 |
kidney cortical cell | 8.38e-07 | 12 |
renal cortical epithelial cell | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
breast | 2.08e-27 | 10 |
chest | 4.86e-25 | 11 |
renal cortex tubule | 4.09e-23 | 3 |
region of nephron tubule | 4.09e-23 | 3 |
proximal tubule | 4.09e-23 | 3 |
nephron tubule epithelium | 6.56e-08 | 10 |
cortex of kidney | 8.38e-07 | 12 |
renal parenchyma | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.40e-66 | 4 |
breast cancer | 2.40e-66 | 4 |
adenocarcinoma | 1.03e-11 | 25 |
disease of anatomical entity | 6.60e-08 | 39 |