FFCP PHASE1:Hg19::chr3:152881859..152881877,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:152881859..152881877,+ | |||
|coexpression_cluster_id=C4296 | |||
|description=CAGE_peak_at_chr3:152881859..152881877,+ | |description=CAGE_peak_at_chr3:152881859..152881877,+ | ||
|id=chr3:152881859..152881877,+ | |id=chr3:152881859..152881877,+ | ||
|ontology_enrichment_celltype=CL:0002009!1.55e-22!65;CL:0002194!8.78e-22!63;CL:0000576!8.78e-22!63;CL:0000040!8.78e-22!63;CL:0000559!8.78e-22!63;CL:0000839!4.53e-21!70;CL:0000557!1.23e-20!71;CL:0002057!9.06e-20!42;CL:0002031!3.05e-19!124;CL:0002087!3.87e-19!119;CL:0000766!4.15e-19!76;CL:0000738!6.92e-19!140;CL:0000860!7.03e-19!45;CL:0000037!3.86e-14!172;CL:0000566!3.86e-14!172;CL:0002032!2.68e-13!165;CL:0000837!2.68e-13!165;CL:0000763!1.13e-12!112;CL:0000049!1.13e-12!112;CL:0000988!1.99e-12!182;CL:0000063!8.36e-07!578 | |ontology_enrichment_celltype=CL:0002009!1.55e-22!65;CL:0002194!8.78e-22!63;CL:0000576!8.78e-22!63;CL:0000040!8.78e-22!63;CL:0000559!8.78e-22!63;CL:0000839!4.53e-21!70;CL:0000557!1.23e-20!71;CL:0002057!9.06e-20!42;CL:0002031!3.05e-19!124;CL:0002087!3.87e-19!119;CL:0000766!4.15e-19!76;CL:0000738!6.92e-19!140;CL:0000860!7.03e-19!45;CL:0000037!3.86e-14!172;CL:0000566!3.86e-14!172;CL:0002032!2.68e-13!165;CL:0000837!2.68e-13!165;CL:0000763!1.13e-12!112;CL:0000049!1.13e-12!112;CL:0000988!1.99e-12!182;CL:0000063!8.36e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.36e-31;39!CL:0000234;1.36e-31;39!CL:0000860;1.18e-29;33!CL:0002057;1.18e-29;33!CL:0000576;2.21e-24;48!CL:0000766;4.38e-18;69!CL:0000235;8.60e-09;6!CL:0000763;5.60e-08;100!CL:0002087;1.98e-07;104!CL:0000738;5.01e-07;136!CL:0002619;7.48e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.07e-44,59;CL:0000576,8.07e-44,59;CL:0000040,8.07e-44,59;CL:0000559,8.07e-44,59;CL:0000473,3.71e-43,48;CL:0000234,3.71e-43,48;CL:0002009,5.58e-42,61;CL:0000839,6.31e-40,66;CL:0000766,1.36e-37,72;CL:0000557,4.07e-37,67;CL:0000860,1.08e-35,42;CL:0002057,1.08e-35,42;CL:0002087,4.38e-29,115;CL:0002031,1.38e-28,120;CL:0000738,5.33e-26,136;CL:0000763,4.81e-22,108;CL:0000049,4.81e-22,108;CL:0002032,1.59e-19,161;CL:0000837,1.59e-19,161;CL:0000037,4.27e-19,168;CL:0000988,2.33e-17,177;CL:0000235,5.73e-09,6;CL:0002619,4.49e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.35e-27;42!CL:0000049;6.68e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.71e-17!80;UBERON:0001474!7.84e-17!86;UBERON:0002193!7.50e-16!112;UBERON:0002390!3.53e-15!102;UBERON:0003061!3.53e-15!102;UBERON:0004765!6.67e-14!101;UBERON:0001434!6.67e-14!101;UBERON:0002405!1.33e-10!115;UBERON:0002204!7.78e-09!167 | |ontology_enrichment_uberon=UBERON:0002371!1.71e-17!80;UBERON:0001474!7.84e-17!86;UBERON:0002193!7.50e-16!112;UBERON:0002390!3.53e-15!102;UBERON:0003061!3.53e-15!102;UBERON:0004765!6.67e-14!101;UBERON:0001434!6.67e-14!101;UBERON:0002405!1.33e-10!115;UBERON:0002204!7.78e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.68e-33,76;UBERON:0001474,6.10e-30,82;UBERON:0004765,1.53e-29,90;UBERON:0002405,7.64e-28,93;UBERON:0002390,5.47e-26,98;UBERON:0003061,5.47e-26,98;UBERON:0001434,2.77e-25,100;UBERON:0002193,5.69e-25,108;UBERON:0002204,8.69e-15,167;UBERON:0003081,2.72e-13,203;UBERON:0000926,2.46e-07,315;UBERON:0004120,2.46e-07,315;UBERON:0006603,2.46e-07,315 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0.247532705920093,0,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0.313454721478088,1.14494394852423,0.410623275218653,0,0.0764134057479513,0.0821005894499457,0.236132343941038,2.36018566109342,0.383829398097213,1.08371286321253,0.919421224478927,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,3.32397245119126,2.00544447470142,1.73608696572681,6.49354875295781,2.26725566213286,1.80302897343931,3.19876125315042,3.77875943688809,2.66842467306598,2.09186133215116,3.28934310417461,1.23882548358041,1.43846196161075,2.0492856522328,0.236482229888585,6.55016793399575,0,2.70852973188684,3.9530891303947,1.91034305040492,2.02251136000576,4.28517449319264,2.24650318953266,2.55734850319616,1.64925650093358,2.99195486432448,1.27867425159808,2.32167390902867,0,0.622822248995575,2.76373531782418,3.12889751052121,1.52032191293582,1.21079900526674,0.736555271975129,0.632924774881769,0.422510572623884,1.70083439972035,0.628975936525128,1.23561494261145,0.901061357049038,0.964353520182481,2.56511469367124,0.59675003159727,0.91332076882317,0,0.546138611262131,1.77901850772711,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0,0,0,1.58030450865046,0.590129310341499,3.14408610199332,0.616804496998528,0.167186495390678,0.32592226663359,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.541607727530031,0.768547918354051,0.650296737799391,0.822189523018381,0.552700035571697,0,0,0,0,0.566546713487831,0.383220493601921,0.68725489096526,0,0.637130828648193,1.95325036156926,0.950452044448374,0,0,0,0,0.821127996921047,1.20964045934839,1.60464117470104,0.579297615531196,0,0.670700859703636,0.383587685530591,0,0.50133791063589,0.434539556882471,0,0,0.850813354476611,0.443458794925128,0.087834785693126,0.0654895377488563,0,1.48313777113772,0.97364218096405,0.696518949197069,1.32957960518865,1.66943437013739,1.71598473234038,0,0.198762407366705,0.860234595106124,0,1.69592382577203,0,0.550236083880135,0,1.29208379584664,0.35576626268671,0.33472061276467,0,0.760272105718513,0.488124115096339,0.367663080345869,1.62028389576352,0.357198913136319,0,0.337834441449967,0,0,0.366403487860815,0,0,0.436094052142534,0,0.506522046658319,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0,0.61246251376468,0.491337269247072,0,0,0.989067717114227,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0.612975591598039,0,1.02088964844019,0,0.640672166455702,0,0,0,0,0.18611685633159,0.506328996723799,0,0,0.276149695926898,0,0,0.10075209822764,0.339121184620975,0.773043412653187,0.545492241181669,0.286804595389004,0,0.397589304964456,0.348581828608555,0.310983165046111,0.252320850875628,0.72995471815166,0,1.92972281457866,0,0,1.44375896333917,0.354920400119532,0.505754070234305,0.241011029883482,0.330881918197182,0,0.237270619111097,0.269662616320329,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0.368965315629341,0,1.20725313949488,1.1240175325762,0.402115889646523,1.01847289674383,0,0,1.44331342025273,0.695582429850461,0.234817388471643,0.433099343283221,0.462985512576611,0.380508304469197,0,1.71697232418975,5.17055712783534,0.936017060556951,1.63494278517601,2.81201501960331,0.16798212819886,0.425325291727159,0.985143749731331,0.581267877027924,0.766765358330422,0,0.176096868026452,0.414656231081544,0.720599767084807,0.12624243342638,1.0159663086747,0.381988425558278,0,0,0.514137463516618,1.50171528921959,1.42913216315289,0.112131084345361,0,0.66004457238855,0.258543431515556,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,1.50719688529793,0,0.199945982364114,2.43247561282381,2.51128545716063,8.43335757932127,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.985153801009636,1.2937654491571,1.02674429023799,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0.749007023947182,0,0,0,2.00068208423871,0.542530047399471,0.207970861530807,0.356857977594324,0.315404830067869,0.585707074963566,0,0,0,0,0,0.868836144680828,0,0,0.82707210449155,0.431428401637234,0.533637789017222,1.5156378572313,0,0.604780586659361,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.116210378459959,0.241718899183244,1.40354529212299,0.644566922551274,0.459257792658427,0.728364672026868,0.393373244878272,0.451199612907412,0.770153371044148,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,1.31555925987561,0.261435451024901,1.02580050046556,0,0,0.206082023295445,0.366277859273374,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0.580066775656914,0.170453254832202,0.356128142586949,0.991709492165869,0.576570202095319,0.255225424989168,0.50578890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|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0.247532705920093,0,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0.313454721478088,1.14494394852423,0.410623275218653,0,0.0764134057479513,0.0821005894499457,0.236132343941038,2.36018566109342,0.383829398097213,1.08371286321253,0.919421224478927,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,3.32397245119126,2.00544447470142,1.73608696572681,6.49354875295781,2.26725566213286,1.80302897343931,3.19876125315042,3.77875943688809,2.66842467306598,2.09186133215116,3.28934310417461,1.23882548358041,1.43846196161075,2.0492856522328,0.236482229888585,6.55016793399575,0,2.70852973188684,3.9530891303947,1.91034305040492,2.02251136000576,4.28517449319264,2.24650318953266,2.55734850319616,1.64925650093358,2.99195486432448,1.27867425159808,2.32167390902867,0,0.622822248995575,2.76373531782418,3.12889751052121,1.52032191293582,1.21079900526674,0.736555271975129,0.632924774881769,0.422510572623884,1.70083439972035,0.628975936525128,1.23561494261145,0.901061357049038,0.964353520182481,2.56511469367124,0.59675003159727,0.91332076882317,0,0.546138611262131,1.77901850772711,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0,0,0,1.58030450865046,0.590129310341499,3.14408610199332,0.616804496998528,0.167186495390678,0.32592226663359,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.541607727530031,0.768547918354051,0.650296737799391,0.822189523018381,0.552700035571697,0,0,0,0,0.566546713487831,0.383220493601921,0.68725489096526,0,0.637130828648193,1.95325036156926,0.950452044448374,0,0,0,0,0.821127996921047,1.20964045934839,1.60464117470104,0.579297615531196,0,0.670700859703636,0.383587685530591,0,0.50133791063589,0.434539556882471,0,0,0.850813354476611,0.443458794925128,0.087834785693126,0.0654895377488563,0,1.48313777113772,0.97364218096405,0.696518949197069,1.32957960518865,1.66943437013739,1.71598473234038,0,0.198762407366705,0.860234595106124,0,1.69592382577203,0,0.550236083880135,0,1.29208379584664,0.35576626268671,0.33472061276467,0,0.760272105718513,0.488124115096339,0.367663080345869,1.62028389576352,0.357198913136319,0,0.337834441449967,0,0,0.366403487860815,0,0,0.436094052142534,0,0.506522046658319,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0,0.61246251376468,0.491337269247072,0,0,0.989067717114227,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0.612975591598039,0,1.02088964844019,0,0.640672166455702,0,0,0,0,0.18611685633159,0.506328996723799,0,0,0.276149695926898,0,0,0.10075209822764,0.339121184620975,0.773043412653187,0.545492241181669,0.286804595389004,0,0.397589304964456,0.348581828608555,0.310983165046111,0.252320850875628,0.72995471815166,0,1.92972281457866,0,0,1.44375896333917,0.354920400119532,0.505754070234305,0.241011029883482,0.330881918197182,0,0.237270619111097,0.269662616320329,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0.368965315629341,0,1.20725313949488,1.1240175325762,0.402115889646523,1.01847289674383,0,0,1.44331342025273,0.695582429850461,0.234817388471643,0.433099343283221,0.462985512576611,0.380508304469197,0,1.71697232418975,5.17055712783534,0.936017060556951,1.63494278517601,2.81201501960331,0.16798212819886,0.425325291727159,0.985143749731331,0.581267877027924,0.766765358330422,0,0.176096868026452,0.414656231081544,0.720599767084807,0.12624243342638,1.0159663086747,0.381988425558278,0,0,0.514137463516618,1.50171528921959,1.42913216315289,0.112131084345361,0,0.66004457238855,0.258543431515556,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,1.50719688529793,0,0.199945982364114,2.43247561282381,2.51128545716063,8.43335757932127,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.985153801009636,1.2937654491571,1.02674429023799,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0.749007023947182,0,0,0,2.00068208423871,0.542530047399471,0.207970861530807,0.356857977594324,0.315404830067869,0.585707074963566,0,0,0,0,0,0.868836144680828,0,0,0.82707210449155,0.431428401637234,0.533637789017222,1.5156378572313,0,0.604780586659361,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.116210378459959,0.241718899183244,1.40354529212299,0.644566922551274,0.459257792658427,0.728364672026868,0.393373244878272,0.451199612907412,0.770153371044148,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,1.31555925987561,0.261435451024901,1.02580050046556,0,0,0.206082023295445,0.366277859273374,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0.580066775656914,0.170453254832202,0.356128142586949,0.991709492165869,0.576570202095319,0.255225424989168,0.50578890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| ||
|short_description=p@chr3:152881859..152881877,+ | |short_description=p@chr3:152881859..152881877,+ | ||
}} | }} |
Latest revision as of 17:14, 29 July 2015
Short description: | p@chr3:152881859..152881877, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:152881859..152881877, + |
Coexpression cluster: | C4296_Monocytederived_CD14_Macrophage_ductal_Basophils_cervical_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 8.07e-44 | 59 |
monocyte | 8.07e-44 | 59 |
monoblast | 8.07e-44 | 59 |
promonocyte | 8.07e-44 | 59 |
defensive cell | 3.71e-43 | 48 |
phagocyte | 3.71e-43 | 48 |
macrophage dendritic cell progenitor | 5.58e-42 | 61 |
myeloid lineage restricted progenitor cell | 6.31e-40 | 66 |
myeloid leukocyte | 1.36e-37 | 72 |
granulocyte monocyte progenitor cell | 4.07e-37 | 67 |
classical monocyte | 1.08e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-35 | 42 |
nongranular leukocyte | 4.38e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 1.38e-28 | 120 |
leukocyte | 5.33e-26 | 136 |
myeloid cell | 4.81e-22 | 108 |
common myeloid progenitor | 4.81e-22 | 108 |
hematopoietic oligopotent progenitor cell | 1.59e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-19 | 161 |
hematopoietic stem cell | 4.27e-19 | 168 |
hematopoietic cell | 2.33e-17 | 177 |
macrophage | 5.73e-09 | 6 |
adult endothelial progenitor cell | 4.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.68e-33 | 76 |
bone element | 6.10e-30 | 82 |
skeletal element | 1.53e-29 | 90 |
immune system | 7.64e-28 | 93 |
hematopoietic system | 5.47e-26 | 98 |
blood island | 5.47e-26 | 98 |
skeletal system | 2.77e-25 | 100 |
hemolymphoid system | 5.69e-25 | 108 |
musculoskeletal system | 8.69e-15 | 167 |
lateral plate mesoderm | 2.72e-13 | 203 |
mesoderm | 2.46e-07 | 315 |
mesoderm-derived structure | 2.46e-07 | 315 |
presumptive mesoderm | 2.46e-07 | 315 |