FF:11306-117C1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005976 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005976 | ||
|accession_numbers=CAGE;DRX008177;DRR009049;DRZ000474;DRZ001859;DRZ011824;DRZ013209 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037136;DRR041502;DRZ007144 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000624 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000031 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr19:45971246..45971265,+!p1@FOSB!2.07!2043.66!FOSB;;chr1:25256756..25256774,-!p1@RUNX3!2.06!205.94!RUNX3;;chr2:157189180..157189290,-!p1@NR4A2!1.97!461.00!NR4A2;;chr10:8096631..8096660,+!p1@GATA3!1.97!109.65!GATA3;;chr14:75746722..75746777,+!p2@FOS!1.93!107.68!FOS;;chr3:63953435..63953499,+!p1@ATXN7!1.93!84.89!ATXN7;;chr5:133451294..133451310,+!p2@TCF7!1.92!82.53!TCF7;;chr7:50343634..50343717,+!p2@IKZF1!1.87!73.10!IKZF1;;chr5:133450365..133450444,+!p1@TCF7!1.86!307.33!TCF7;;chr19:54058073..54058088,+!p1@ZNF331!1.86!70.74!ZNF331;;chr2:192015701..192015743,-!p1@STAT4!1.83!90.00!STAT4;;chr10:8096772..8096787,+!p2@GATA3!1.83!78.21!GATA3;;chr15:60884706..60884743,-!p1@RORA!1.81!311.66!RORA;;chr14:75745523..75745537,+!p1@FOS!1.80!6940.57!FOS;;chr9:102584262..102584276,+!p1@NR4A3!1.79!131.27!NR4A3;;chr20:50159198..50159299,-!p1@NFATC2!1.76!82.14!NFATC2;;chr6:91006518..91006570,-!p1@BACH2!1.75!124.19!BACH2;;chrX:106960285..106960299,-!p1@TSC22D3!1.74!1359.42!TSC22D3;;chr19:54041669..54041697,+!p2@ZNF331!1.72!51.09!ZNF331;;chr9:3525727..3525828,-!p2@RFX3!1.69!117.51!RFX3;;chr2:231090433..231090469,+!p1@SP140!1.67!45.59!SP140;;chrY:21906594..21906622,-!p1@KDM5D!1.61!39.30!KDM5D;;chr3:71355163..71355209,-!p5@FOXP1!1.60!52.66!FOXP1;;chr19:16435625..16435682,+!p1@KLF2!1.58!1123.22!KLF2;;chr3:39195075..39195088,-!p1@CSRNP1!1.58!219.69!CSRNP1;;chr19:19729477..19729542,-!p1@PBX4!1.54!70.35!PBX4;;chr3:18486354..18486377,-!p2@SATB1!1.54!42.05!SATB1;;chr17:38020392..38020477,-!p1@IKZF3!1.54!33.80!IKZF3;;chr19:16435423..16435484,+!p5@KLF2!1.54!33.41!KLF2;;chr10:3824332..3824425,-!p4@KLF6!1.53!52.27!KLF6;;chr4:109087445..109087463,-!p1@LEF1!1.52!31.83!LEF1;;chr9:102584241..102584261,+!p4@NR4A3!1.50!46.77!NR4A3;;chrX:106960180..106960197,-!p2@TSC22D3!1.49!109.65!TSC22D3;;chr10:35484053..35484076,+!p1@CREM!1.48!71.53!CREM;;chr6:106546808..106546833,+!p3@PRDM1!1.48!36.55!PRDM1;;chr2:192015750..192015793,-!p2@STAT4!1.46!37.34!STAT4;;chr19:12902289..12902307,+!p1@JUNB!1.45!5871.97!JUNB;;chr1:59249688..59249703,-!p3@JUN!1.45!157.99!JUN;;chr7:50343895..50343936,+!p5@IKZF1!1.44!26.72!IKZF1;;chr3:71542615..71542644,-!p12@FOXP1!1.43!25.94!FOXP1;;chr9:117150254..117150271,-!p1@AKNA!1.42!67.99!AKNA;;chr6:391743..391759,+!p1@IRF4!1.42!25.15!IRF4;;chr7:104654718..104654741,+!p3@MLL5!1.41!35.76!MLL5;;chr12:72056800..72056834,+!p1@THAP2!1.41!33.41!THAP2;;chr8:123793988..123794016,+!p1@ZHX2!1.40!41.66!ZHX2;;chr2:157189617..157189667,-!p4@NR4A2!1.40!24.37!NR4A2;;chr9:102584128..102584144,+!p3@NR4A3!1.39!44.02!NR4A3;;chr14:35873947..35873965,-!p1@NFKBIA!1.38!1382.61!NFKBIA;;chr3:71542684..71542720,-!p18@FOXP1!1.38!23.19!FOXP1;;chr5:131826457..131826514,-!p1@IRF1!1.37!843.40!IRF1;;chr11:67007548..67007610,+!p3@KDM2A!1.37!161.53!KDM2A;;chr6:12009042..12009092,+!p6@HIVEP1!1.37!28.69!HIVEP1;;chr4:109090075..109090095,-!p2@LEF1!1.37!22.40!LEF1;;chr14:99738138..99738163,-!p1@BCL11B!1.37!22.40!BCL11B;;chr3:23986824..23986848,+!p2@NR1D2!1.36!119.08!NR1D2;;chr14:64971288..64971316,-!p2@ZBTB25!1.36!66.03!ZBTB25;;chr6:91006575..91006602,-!p2@BACH2!1.36!32.23!BACH2;;chr8:81397846..81397860,+!p3@ZBTB10!1.36!27.12!ZBTB10;;chr17:38497662..38497713,+!p4@RARA!1.36!25.15!RARA;;chr4:103422499..103422632,+!p1@NFKB1!1.35!429.56!NFKB1;;chrX:106960221..106960236,-!p3@TSC22D3!1.35!58.56!TSC22D3;;chr14:35872453..35872485,-!p2@NFKBIA!1.35!51.48!NFKBIA;;chr2:43453734..43453751,-!p1@ZFP36L2!1.34!2125.40!ZFP36L2;;chr15:60884747..60884774,-!p3@RORA!1.34!50.31!RORA;;chr2:97202480..97202499,+!p1@ARID5A!1.33!200.44!ARID5A;;chr19:54041645..54041661,+!p5@ZNF331!1.33!20.44!ZNF331;;chr20:51588873..51588953,+!p1@TSHZ2!1.32!26.33!TSHZ2;;chr3:71542651..71542683,-!p22@FOXP1!1.31!19.26!FOXP1;;chr1:59249707..59249727,-!p1@JUN!1.30!767.94!JUN;;chr7:104654690..104654704,+!p2@MLL5!1.30!36.94!MLL5;;chr8:81397820..81397836,+!p2@ZBTB10!1.29!23.19!ZBTB10;;chr5:133451347..133451358,+!p3@TCF7!1.29!18.47!TCF7;;chr18:46475696..46475713,-!p1@SMAD7!1.28!20.44!SMAD7;;chr7:17338324..17338341,+!p3@AHR!1.27!57.77!AHR;;chr1:91487774..91487802,-!p2@ZNF644!1.27!45.59!ZNF644;;chr1:45805693..45805718,+!p3@TOE1!1.27!37.34!TOE1;;chr14:64970670..64970712,-!p3@ZBTB25!1.27!37.34!ZBTB25;;chr17:45810594..45810608,+!p1@TBX21!1.26!17.29!TBX21;;chr2:231090471..231090504,+!p2@SP140!1.26!17.29!SP140;;chr18:77155922..77155939,+!p1@NFATC1!1.23!43.23!NFATC1;;chr14:99738059..99738086,-!p2@BCL11B!1.23!16.11!BCL11B;;chr4:103498623..103498650,+!p9@NFKB1!1.23!16.11!NFKB1;;chr10:3827389..3827408,-!p1@KLF6!1.22!1177.85!KLF6;;chr13:74707894..74707947,-!p6@KLF12!1.22!17.29!KLF12;;chr2:192015677..192015691,-!p3@STAT4!1.21!15.33!STAT4;;chr3:18487057..18487105,-!p4@SATB1!1.21!15.33!SATB1;;chr13:41240717..41240735,-!p2@FOXO1!1.20!99.43!FOXO1;;chr3:39195037..39195069,-!p2@CSRNP1!1.20!90.39!CSRNP1;;chr21:36421535..36421610,-!p2@RUNX1!1.20!52.27!RUNX1;;chr14:35874077..35874091,-!p8@NFKBIA!1.20!14.93!NFKBIA;;chr14:75988831..75988847,+!p2@BATF!1.20!14.93!BATF;;chr4:38665769..38665801,+!p2@KLF3!1.19!128.51!KLF3;;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| |expression_enrichment_score=chr19:45971246..45971265,+!p1@FOSB!2.07!2043.66!FOSB;;chr1:25256756..25256774,-!p1@RUNX3!2.06!205.94!RUNX3;;chr2:157189180..157189290,-!p1@NR4A2!1.97!461.00!NR4A2;;chr10:8096631..8096660,+!p1@GATA3!1.97!109.65!GATA3;;chr14:75746722..75746777,+!p2@FOS!1.93!107.68!FOS;;chr3:63953435..63953499,+!p1@ATXN7!1.93!84.89!ATXN7;;chr5:133451294..133451310,+!p2@TCF7!1.92!82.53!TCF7;;chr7:50343634..50343717,+!p2@IKZF1!1.87!73.10!IKZF1;;chr5:133450365..133450444,+!p1@TCF7!1.86!307.33!TCF7;;chr19:54058073..54058088,+!p1@ZNF331!1.86!70.74!ZNF331;;chr2:192015701..192015743,-!p1@STAT4!1.83!90.00!STAT4;;chr10:8096772..8096787,+!p2@GATA3!1.83!78.21!GATA3;;chr15:60884706..60884743,-!p1@RORA!1.81!311.66!RORA;;chr14:75745523..75745537,+!p1@FOS!1.80!6940.57!FOS;;chr9:102584262..102584276,+!p1@NR4A3!1.79!131.27!NR4A3;;chr20:50159198..50159299,-!p1@NFATC2!1.76!82.14!NFATC2;;chr6:91006518..91006570,-!p1@BACH2!1.75!124.19!BACH2;;chrX:106960285..106960299,-!p1@TSC22D3!1.74!1359.42!TSC22D3;;chr19:54041669..54041697,+!p2@ZNF331!1.72!51.09!ZNF331;;chr9:3525727..3525828,-!p2@RFX3!1.69!117.51!RFX3;;chr2:231090433..231090469,+!p1@SP140!1.67!45.59!SP140;;chrY:21906594..21906622,-!p1@KDM5D!1.61!39.30!KDM5D;;chr3:71355163..71355209,-!p5@FOXP1!1.60!52.66!FOXP1;;chr19:16435625..16435682,+!p1@KLF2!1.58!1123.22!KLF2;;chr3:39195075..39195088,-!p1@CSRNP1!1.58!219.69!CSRNP1;;chr19:19729477..19729542,-!p1@PBX4!1.54!70.35!PBX4;;chr3:18486354..18486377,-!p2@SATB1!1.54!42.05!SATB1;;chr17:38020392..38020477,-!p1@IKZF3!1.54!33.80!IKZF3;;chr19:16435423..16435484,+!p5@KLF2!1.54!33.41!KLF2;;chr10:3824332..3824425,-!p4@KLF6!1.53!52.27!KLF6;;chr4:109087445..109087463,-!p1@LEF1!1.52!31.83!LEF1;;chr9:102584241..102584261,+!p4@NR4A3!1.50!46.77!NR4A3;;chrX:106960180..106960197,-!p2@TSC22D3!1.49!109.65!TSC22D3;;chr10:35484053..35484076,+!p1@CREM!1.48!71.53!CREM;;chr6:106546808..106546833,+!p3@PRDM1!1.48!36.55!PRDM1;;chr2:192015750..192015793,-!p2@STAT4!1.46!37.34!STAT4;;chr19:12902289..12902307,+!p1@JUNB!1.45!5871.97!JUNB;;chr1:59249688..59249703,-!p3@JUN!1.45!157.99!JUN;;chr7:50343895..50343936,+!p5@IKZF1!1.44!26.72!IKZF1;;chr3:71542615..71542644,-!p12@FOXP1!1.43!25.94!FOXP1;;chr9:117150254..117150271,-!p1@AKNA!1.42!67.99!AKNA;;chr6:391743..391759,+!p1@IRF4!1.42!25.15!IRF4;;chr7:104654718..104654741,+!p3@MLL5!1.41!35.76!MLL5;;chr12:72056800..72056834,+!p1@THAP2!1.41!33.41!THAP2;;chr8:123793988..123794016,+!p1@ZHX2!1.40!41.66!ZHX2;;chr2:157189617..157189667,-!p4@NR4A2!1.40!24.37!NR4A2;;chr9:102584128..102584144,+!p3@NR4A3!1.39!44.02!NR4A3;;chr14:35873947..35873965,-!p1@NFKBIA!1.38!1382.61!NFKBIA;;chr3:71542684..71542720,-!p18@FOXP1!1.38!23.19!FOXP1;;chr5:131826457..131826514,-!p1@IRF1!1.37!843.40!IRF1;;chr11:67007548..67007610,+!p3@KDM2A!1.37!161.53!KDM2A;;chr6:12009042..12009092,+!p6@HIVEP1!1.37!28.69!HIVEP1;;chr4:109090075..109090095,-!p2@LEF1!1.37!22.40!LEF1;;chr14:99738138..99738163,-!p1@BCL11B!1.37!22.40!BCL11B;;chr3:23986824..23986848,+!p2@NR1D2!1.36!119.08!NR1D2;;chr14:64971288..64971316,-!p2@ZBTB25!1.36!66.03!ZBTB25;;chr6:91006575..91006602,-!p2@BACH2!1.36!32.23!BACH2;;chr8:81397846..81397860,+!p3@ZBTB10!1.36!27.12!ZBTB10;;chr17:38497662..38497713,+!p4@RARA!1.36!25.15!RARA;;chr4:103422499..103422632,+!p1@NFKB1!1.35!429.56!NFKB1;;chrX:106960221..106960236,-!p3@TSC22D3!1.35!58.56!TSC22D3;;chr14:35872453..35872485,-!p2@NFKBIA!1.35!51.48!NFKBIA;;chr2:43453734..43453751,-!p1@ZFP36L2!1.34!2125.40!ZFP36L2;;chr15:60884747..60884774,-!p3@RORA!1.34!50.31!RORA;;chr2:97202480..97202499,+!p1@ARID5A!1.33!200.44!ARID5A;;chr19:54041645..54041661,+!p5@ZNF331!1.33!20.44!ZNF331;;chr20:51588873..51588953,+!p1@TSHZ2!1.32!26.33!TSHZ2;;chr3:71542651..71542683,-!p22@FOXP1!1.31!19.26!FOXP1;;chr1:59249707..59249727,-!p1@JUN!1.30!767.94!JUN;;chr7:104654690..104654704,+!p2@MLL5!1.30!36.94!MLL5;;chr8:81397820..81397836,+!p2@ZBTB10!1.29!23.19!ZBTB10;;chr5:133451347..133451358,+!p3@TCF7!1.29!18.47!TCF7;;chr18:46475696..46475713,-!p1@SMAD7!1.28!20.44!SMAD7;;chr7:17338324..17338341,+!p3@AHR!1.27!57.77!AHR;;chr1:91487774..91487802,-!p2@ZNF644!1.27!45.59!ZNF644;;chr1:45805693..45805718,+!p3@TOE1!1.27!37.34!TOE1;;chr14:64970670..64970712,-!p3@ZBTB25!1.27!37.34!ZBTB25;;chr17:45810594..45810608,+!p1@TBX21!1.26!17.29!TBX21;;chr2:231090471..231090504,+!p2@SP140!1.26!17.29!SP140;;chr18:77155922..77155939,+!p1@NFATC1!1.23!43.23!NFATC1;;chr14:99738059..99738086,-!p2@BCL11B!1.23!16.11!BCL11B;;chr4:103498623..103498650,+!p9@NFKB1!1.23!16.11!NFKB1;;chr10:3827389..3827408,-!p1@KLF6!1.22!1177.85!KLF6;;chr13:74707894..74707947,-!p6@KLF12!1.22!17.29!KLF12;;chr2:192015677..192015691,-!p3@STAT4!1.21!15.33!STAT4;;chr3:18487057..18487105,-!p4@SATB1!1.21!15.33!SATB1;;chr13:41240717..41240735,-!p2@FOXO1!1.20!99.43!FOXO1;;chr3:39195037..39195069,-!p2@CSRNP1!1.20!90.39!CSRNP1;;chr21:36421535..36421610,-!p2@RUNX1!1.20!52.27!RUNX1;;chr14:35874077..35874091,-!p8@NFKBIA!1.20!14.93!NFKBIA;;chr14:75988831..75988847,+!p2@BATF!1.20!14.93!BATF;;chr4:38665769..38665801,+!p2@KLF3!1.19!128.51!KLF3;;chr2:97202991..97203043,+!p3@ARID5A!1.19!14.54!ARID5A;;chr14:75747250..75747267,+!p5@FOS!1.19!14.54!FOS;;chr20:56195474..56195506,-!p1@ZBP1!1.19!14.54!ZBP1;;chr10:104154246..104154347,+!p3@NFKB2!1.17!83.32!NFKB2;;chr6:143266297..143266356,-!p1@HIVEP2!1.17!66.42!HIVEP2;;chr10:3827371..3827386,-!p2@KLF6!1.16!111.62!KLF6;;chr2:208394817..208394834,+!p3@CREB1!1.16!53.45!CREB1;;chr9:102584278..102584285,+!p5@NR4A3!1.16!13.36!NR4A3;;chr14:75747296..75747329,+!p4@FOS!1.16!13.36!FOS;;chr17:37934365..37934387,-!p2@IKZF3!1.16!13.36!IKZF3;;chr11:67007611..67007622,+!p6@KDM2A!1.15!17.69!KDM2A;;chr2:157186630..157186686,-!p6@NR4A2!1.15!12.97!NR4A2;;chr6:106546834..106546850,+!p4@PRDM1!1.15!12.97!PRDM1;;chr2:61108695..61108753,+!p1@REL!1.14!88.43!REL;;chr10:35416142..35416169,+!p3@CREM!1.14!33.80!CREM;;chr11:67007522..67007533,+!p5@KDM2A!1.14!22.01!KDM2A;;chr7:106809470..106809481,+!p2@HBP1!1.14!18.08!HBP1;;chr11:128392273..128392308,-!p2@ETS1!1.13!53.45!ETS1;;chr3:5020939..5020952,+!p2@BHLHE40!1.13!38.91!BHLHE40;;chr14:35872926..35872951,-!p4@NFKBIA!1.13!17.69!NFKBIA;;chr10:3819310..3819325,-!p5@KLF6!1.13!16.51!KLF6;;chr16:79634595..79634620,-!p2@MAF!1.12!22.40!MAF;;chr20:51589835..51589848,+!p5@TSHZ2!1.12!12.18!TSHZ2;;chr19:45972203..45972226,+!p5@FOSB!1.11!11.79!FOSB;;chr19:45977697..45977713,+!p4@FOSB!1.11!11.79!FOSB;;chr7:50344289..50344323,+!p1@IKZF1!1.11!11.79!IKZF1;;chr15:31619326..31619390,+!p2@KLF13!1.10!134.80!KLF13;;chr1:59249645..59249656,-!p4@JUN!1.10!29.08!JUN;;chr3:39195139..39195150,-!p3@CSRNP1!1.10!14.93!CSRNP1;;chr3:71007344..71007348,-!p6@FOXP1!1.09!45.98!FOXP1;;chr8:81398444..81398472,+!p1@ZBTB10!1.09!45.59!ZBTB10;;chr6:157098579..157098634,+!p4@ARID1B!1.09!25.55!ARID1B;;chr5:142782823..142782854,-!p3@NR3C1!1.09!16.11!NR3C1;;chr19:45972701..45972774,+!p2@FOSB!1.09!15.33!FOSB;;chr7:50344251..50344288,+!p3@IKZF1!1.09!11.40!IKZF1;;chr4:109086281..109086319,-!p9@LEF1!1.09!11.40!LEF1;;chr4:149365827..149365870,-!p5@NR3C2!1.09!11.40!NR3C2;;chr14:99737850..99737852,-!p3@BCL11B!1.09!11.40!BCL11B;;chr17:56565257..56565283,-!p2@HSF5!1.09!11.40!HSF5;;chr19:18392422..18392440,-!p1@JUND!1.08!1518.59!JUND;;chrX:106960249..106960260,-!p5@TSC22D3!1.08!17.69!TSC22D3;;chr19:54041603..54041615,+!p10@ZNF331!1.08!11.00!ZNF331;;chr14:35872542..35872553,-!p10@NFKBIA!1.08!11.00!NFKBIA;;chr1:59249732..59249749,-!p2@JUN!1.07!129.69!JUN;;chr14:35872962..35873025,-!p3@NFKBIA!1.07!27.12!NFKBIA;;chr19:16435523..16435619,+!p2@KLF2!1.07!14.93!KLF2;;chr2:113057415..113057477,+!p3@ZC3H6!1.07!14.15!ZC3H6;;chr11:128392085..128392232,-!p1@ETS1!1.06!350.57!ETS1;;chr11:67007477..67007493,+!p2@KDM2A!1.06!89.21!KDM2A;;chr16:79634624..79634642,-!p1@MAF!1.06!42.05!MAF;;chr1:10754477..10754517,-!p1@CASZ1!1.06!17.69!CASZ1;;chr14:75988771..75988826,+!p1@BATF!1.06!14.15!BATF;;chr8:81397876..81397898,+!p5@ZBTB10!1.06!12.58!ZBTB10;;chr8:41909982..41910009,-!p2@KAT6A!1.06!11.79!KAT6A;;chr4:103498478..103498489,+!p12@NFKB1!1.06!10.61!NFKB1;;chr4:87927888..87927912,+!p18@AFF1!1.06!10.61!AFF1;;chr12:51158359..51158395,+!p4@ATF1!1.06!10.61!ATF1;;chr9:73028332..73028385,-!p3@KLF9!1.05!35.76!KLF9;;chr12:72056773..72056796,+!p3@THAP2!1.05!13.36!THAP2;;chr13:41593425..41593480,-!p1@ELF1!1.04!64.45!ELF1;;chr7:21467674..21467727,+!p1@SP4!1.04!40.09!SP4;;chr19:12721790..12721810,+!p2@ZNF791!1.04!27.90!ZNF791;;chr7:21467642..21467671,+!p2@SP4!1.04!23.19!SP4;;chr5:172483347..172483407,+!p1@C5orf41!1.03!73.49!CREBRF;;chr2:61108650..61108687,+!p2@REL!1.03!48.73!REL;;chr1:91487836..91487854,-!p3@ZNF644!1.03!22.40!ZNF644;;chr14:35872494..35872511,-!p5@NFKBIA!1.03!12.97!NFKBIA;;chr7:127032330..127032356,-!p3@ZNF800!1.03!12.58!ZNF800;;chr10:135121763..135121783,+!p5@ZNF511!1.03!9.83!ZNF511;;chr14:75746781..75746799,+!p6@FOS!1.03!9.83!FOS;;chr10:3827417..3827428,-!p3@KLF6!1.02!82.93!KLF6;;chr20:56195525..56195556,-!p2@ZBP1!1.02!9.43!ZBP1;;chr4:109088130..109088163,-!p13@LEF1!1.02!9.43!LEF1;;chrX:49121165..49121179,-!p1@FOXP3!1.02!9.43!FOXP3;;chr8:103668114..103668134,-!p5@KLF10!1.02!9.43!KLF10;;chr8:123793252..123793266,+!p10@ZHX2!1.02!9.43!ZHX2;;chr1:37940170..37940190,+!p1@ZC3H12A!1.01!117.12!ZC3H12A;;chr19:18391593..18391611,-!p6@JUND!1.01!15.33!JUND;;chr19:18391708..18391737,-!p7@JUND!1.01!14.15!JUND;;chr13:74708246..74708264,-!p8@KLF12!1.01!10.22!KLF12;;chr3:63898321..63898396,+!p3@ATXN7!1.00!21.22!ATXN7;;chr8:102218439..102218455,-!p3@ZNF706!1.00!9.04!ZNF706;;chr13:41240737..41240787,-!p1@FOXO1!0.99!106.51!FOXO1;;chr16:3313791..3313834,+!p2@ZNF263!0.99!20.04!ZNF263;;chr9:102584159..102584174,+!p2@NR4A3!0.99!16.11!NR4A3;;chr14:64971461..64971542,+!p1@ZBTB1!0.98!177.25!ZBTB1;;chr11:13299319..13299424,+!p1@ARNTL!0.98!88.43!ARNTL;;chr19:19779619..19779670,+!p1@ZNF101!0.98!24.76!ZNF101;;chr11:85375237..85375277,-!p4@CREBZF!0.98!9.83!CREBZF;;chr10:3824206..3824226,-!p10@KLF6!0.98!8.65!KLF6;;chr5:142814241..142814278,-!p12@NR3C1!0.98!8.65!NR3C1;;chr3:71179699..71179744,-!p2@FOXP1!0.97!63.67!FOXP1;;chr9:114287433..114287513,+!p1@ZNF483!0.97!22.40!ZNF483;;chr3:33482052..3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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988 | |||
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor2.CNhs11955.11306-117C1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor2.CNhs11955.11306-117C1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor2.CNhs11955.11306-117C1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor2.CNhs11955.11306-117C1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor2.CNhs11955.11306-117C1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11306-117C1 | |id=FF:11306-117C1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000031;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs11955 | |||
|library_id_phase_based=2:CNhs11955 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11306 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.CTTGTA.11306 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11306 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.CTTGTA.11306 | |||
|name=CD4+ T Cells, donor2 | |name=CD4+ T Cells, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11955,LSID836,release011,COMPLETED | |profile_hcage=CNhs11955,LSID836,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10009,,, | |profile_srnaseq=SRhi10009,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.56584809523657,0.338263665539428,0.927502661693766,0.764580386755391,0,0,0,0,0,0,0,0,0,0,0.143954471904592,0.251886688790383,0,0.896603258606506,0,0,0,0,0,0.519470873932467,0,0,0.653023481979043,0,0,0,0,0,0,0,0,0,0,0.143954471904592,0,0.722682006625193,0.525933711676111,0.143954471904592,0,0,0,0,0,0,0.354335995331971,0,0,0,0,0,-0.0196864440456356,0.143954471904592,0.595864039072255,0,0,0.559434424121265,0,0,0,0,0,0,0,0,0.338263665539428,0,1.39059328817087,0,0,0.526089043483321,0,0,0,0.229341524857976,0.071977235952296,0,0,0.071977235952296,0,0,-0.09859357904256,0,0,0,0.0693709642695228,0.822518498838637,0,0,0.169131832769714,0,0.558742700096656,0.672659137672116,0,0,0,0,0,0.071977235952296,0.143954471904592,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0.143954471904592,0,0,0.771803141776148,1.14161008473634,0.143954471904592,0,0.338263665539428,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.558742700096656,0.143954471904592,0,0.472032579926512,0,0,0,0,0,0,0,0,-0.103224403380973,0,-0.474086218752008,0.266763091034239,0.071977235952296,0.574155786915165,0.418132087133464,0,0.143954471904592,0,0,1.6571535695113,0,1.40426341273047,1.54156583547688,0,-0.128119866952565,0,-0.0504125515893149,0,0.526089043483321,0,0,0,0.311956539302117,0,-0.0483147167543182,-0.0683442610773682,0,0,0,0,0.0248345078305813,0,0.289398749763971,0.169166520466966,0,-0.496170552807322,0.518443290133983,0,0.133899868809168,0,-0.281572163678337,-0.608100679835177,0,0,0.331769731005545,0.282520405731477,0,0,-0.391044581551635,0,-0.0387534580779193,-0.248868050382253,0,0.0544056372674055,0,0,0.838544439071372,0,0,0,0,0,0.143954471904592,0,0,-0.0574934668214365,0.620455676327254,0.106600586100836,0,0,0,0.494165352014719,0,0,-0.373286155956567,-0.206781541392267,0.071932229144728,-0.138215108888895,0,-0.302389727009913,-0.086171396936116,-0.0424471883657515,0.0693709642695228,0.19086181616829,-0.0460272476452554,0,-0.09859357904256,-0.0934162287991516,0,0.220357863223009,-0.0175945734392948,-1.2314085082871,0.216895855473219,0,0,-0.0775089264793031,0.284782481717504,0,0.323283149964186,-0.0180821345502612,0.095147319451725,-0.67098743647571,-0.389322024820896,-0.479250981354933,-0.0277438131615222,-0.0395325284566706,0.199341598437767,0,-0.4215723249037,-0.0624525134408418,0,0,-0.0628766001249912,-0.0597459817843661,0.418612526637675,0,-0.145713796271552,0.0756102108272237,0,-0.573990670585616,0.0247952923000363,0,-0.0346114555193475,-0.00462144395624697,0,0,0.07921883226737,0,0,-0.074498405311916,0.640874261759036,0.817070707399389,0,0.147419162471267,-0.00745167963258415,0.379917899477394,0,0.487210413626223,0,-0.1541196804567,-0.159400178335077,0,-0.320606952500822,-0.358398203408685,-0.164990696339003,-0.0121165718340262,0.0855076450927667,0.600683153248618,0.370956237704024,0.0233987732505274,0.53417911868604,0,-0.0881268324752877,0.0441544838822997,0.150893949297974,0.912923405417906,0.0086291539273009,-0.255140878562391,0,0.0833235001982366,0,0.127154082244162,0.071977235952296,0.620473985110126,0.15242264884162,1.34134921947594,0.0498322053192495,0,0.234747211362294,-0.644176465869382,0,-0.182184206051982,0,0.143954471904592,-0.150367083334639,-0.697695966512583,0.0294586408574208,-0.138989456679195,0,-0.646125686485065,0,0,-0.22939793441518,0.884549205624165,0,-0.0577641290698913,0.229341524857976,0.323524007388978,-0.115971073434934,0.785980071757905,0,-0.645700337992725,0,0,-0.60592806381803,0,-0.147750744032121,0.272762701996565,-0.113116410789592,-0.108622809454255,0,0,0.769916507041047,0.472032579926512,-0.295982169851562,0,0,0.00200539219155935,-0.116628112990133,0,0.483146585150262,0,0,0,0,0,0,0,0,0,-0.0145047925841018,0.0554449033412633,0,0.130952390999241,0,0,0,0,0,0.196518692606796,0,0,-0.806350767061771,0.0157232803950717,-0.12301741567642,0,0.143954471904592,0.071977235952296,0,-0.215723402553475,0.370919224820441,0.472032579926512,0.27841552706008,0,0,0,0,0.252122675750217,0,0,0.071977235952296,0.125943344395192,0.55969831314686,0.509864720800076,0.251886688790383,0,0,1.20136380343964,0.143954471904592,0,0,0,0.646024704141279,0,0,-0.159897593459868,0,-0.0590145567917153,0.256681785992587,0,0.217606859678337,0.0840503319582204,-1.16566586874387,0,0,-0.261347131789888,0,0,0.0968385251030874,0,0.143954471904592,0,0,0,0.308714385100262,0,0.472032579926512,0.338263665539428,0.820124187416599,0,0,0,0,0,0,0,0,0.143954471904592,0,0,-0.00885704496715412,0.0517304152460815,0,0,0,0,0,0,0,-0.0241060230789031,0.062148505402799,0,0,0.0403142620130911,0,0,0.338263665539428,0,0,0.720064148975419,0,0,0,0,0,0.595864039072255,0,0.656778051334362,0,0,1.05712819358427,0,0,0.561182306877858,0,0.0196063449748663,0,0,0,0,0.0503139457498235,0,0,0,0,0,0,0.214944579503981,1.01583899835591,0,0.143954471904592,0,0,0,0.338263665539428,0,0.927502661693766,0,0.472032579926512,0,0,0.0300700981956147,0,0,0,-0.104796384789156,0,0.56584809523657,0,0.143954471904592,0,0,0,0,0.431309312769904,0.169131832769714,0,0,0,0,0,0,0,0,0,0.205139116778855,0,0,0,-0.312970387606763,0,-0.0295164096998591,0.0429684174981715,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0.25636424199908,0,0,0,0,0,0,0,0.26304452174166,0,0,0,0,0,0,0,0,0.617428770200524,0.143954471904592,0,0,0,0,0,0,0.15566071750038,0,0,0,0,0,0,0,0.519470873932467,0,0,1.32425411907326,0,0,0.0909969523368318,0,0,0,-0.215999604704413,-0.283220399823148,-0.025187642555139,0,0,0,-0.054385572482455,0,0,-0.0650738225586148,0.143954471904592,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0.071977235952296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896603258606506,0,0,0.143954471904592,0,0.617428770200524,0,0,0,0,0,0,0,0.26304452174166,0,0,0,0,0,0,0,0,0,0,0,0,0.338263665539428,0,0.574155786915165,0.24110906872201,0,0,0,0,0,0,0.513671485939103,0.472032579926512,0,0,0,0.143954471904592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705961603489267,0,0,0,0.197192003900668,0,0,0,0,0,0,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| |||
|rna_box=117 | |rna_box=117 | ||
|rna_catalog_number=3H100-23-10 | |rna_catalog_number=3H100-23-10 | ||
| Line 56: | Line 82: | ||
|rna_tube_id=117C1 | |rna_tube_id=117C1 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10009.CTTGTA | |||
|sample_age=57 | |sample_age=57 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.56655890480506e-226!GO:0043227;membrane-bound organelle;4.19754128443589e-197!GO:0043231;intracellular membrane-bound organelle;8.4163638208415e-197!GO:0043226;organelle;1.90364931063399e-185!GO:0043229;intracellular organelle;8.87175750879833e-185!GO:0005737;cytoplasm;4.62013765992835e-125!GO:0005634;nucleus;2.04307803396212e-118!GO:0044422;organelle part;1.16265341063597e-108!GO:0044446;intracellular organelle part;5.1586810354832e-107!GO:0043170;macromolecule metabolic process;1.08498454725077e-103!GO:0044237;cellular metabolic process;2.87903166454459e-99!GO:0044238;primary metabolic process;1.00231120013036e-95!GO:0032991;macromolecular complex;7.10867167923538e-86!GO:0044428;nuclear part;1.75900399343548e-82!GO:0043283;biopolymer metabolic process;1.0077224865301e-79!GO:0003723;RNA binding;3.02871467308312e-78!GO:0044444;cytoplasmic part;1.82901600682151e-76!GO:0030529;ribonucleoprotein complex;6.05544579787711e-76!GO:0010467;gene expression;1.21327466718895e-66!GO:0043233;organelle lumen;2.51484115282339e-66!GO:0031974;membrane-enclosed lumen;2.51484115282339e-66!GO:0005515;protein binding;1.72437450689368e-63!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.30052207130132e-62!GO:0031981;nuclear lumen;3.16924161133116e-53!GO:0006396;RNA processing;6.32380631170484e-52!GO:0003676;nucleic acid binding;6.47167024656748e-48!GO:0019538;protein metabolic process;7.84825986454192e-48!GO:0044267;cellular protein metabolic process;1.00993690206965e-46!GO:0016071;mRNA metabolic process;2.43692023553033e-46!GO:0033036;macromolecule localization;8.70173109915485e-46!GO:0044260;cellular macromolecule metabolic process;1.04954936851547e-45!GO:0006412;translation;8.5391223707675e-45!GO:0015031;protein transport;3.24530704776346e-44!GO:0043234;protein complex;2.55372235291458e-42!GO:0045184;establishment of protein localization;7.81886921054562e-42!GO:0008104;protein localization;2.17880843622464e-41!GO:0016070;RNA metabolic process;2.23072124598219e-40!GO:0008380;RNA splicing;9.66129797220231e-40!GO:0005739;mitochondrion;2.8336413908966e-39!GO:0005840;ribosome;9.18086691868897e-39!GO:0006397;mRNA processing;1.88330085473181e-38!GO:0005654;nucleoplasm;8.73865163815352e-34!GO:0003735;structural constituent of ribosome;2.65310214176622e-33!GO:0046907;intracellular transport;3.17179809827127e-33!GO:0006259;DNA metabolic process;1.22201083074691e-32!GO:0031090;organelle membrane;1.38973019114004e-32!GO:0009059;macromolecule biosynthetic process;2.73819695756017e-32!GO:0006886;intracellular protein transport;4.41471124066701e-32!GO:0031967;organelle envelope;8.92079678728525e-32!GO:0016043;cellular component organization and biogenesis;1.18925675790961e-31!GO:0031975;envelope;1.77682202000592e-31!GO:0033279;ribosomal subunit;3.66523474554783e-31!GO:0005681;spliceosome;8.93410418075476e-30!GO:0005829;cytosol;1.43541192529731e-29!GO:0044429;mitochondrial part;2.74793679332554e-29!GO:0006512;ubiquitin cycle;1.52515827997659e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.4480106702505e-28!GO:0000166;nucleotide binding;1.36061193706483e-27!GO:0044451;nucleoplasm part;1.64482141100669e-27!GO:0065003;macromolecular complex assembly;4.38448096683603e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.47790123325678e-26!GO:0006996;organelle organization and biogenesis;1.35488361004631e-25!GO:0022607;cellular component assembly;1.59045806507912e-24!GO:0044445;cytosolic part;5.76781223412099e-24!GO:0043412;biopolymer modification;7.57082101791657e-24!GO:0044249;cellular biosynthetic process;2.02176419516871e-23!GO:0009058;biosynthetic process;3.14429584812969e-23!GO:0051641;cellular localization;4.56768603314327e-23!GO:0051649;establishment of cellular localization;8.30820135916594e-23!GO:0012501;programmed cell death;2.52983836404958e-22!GO:0006915;apoptosis;3.06614635330985e-22!GO:0008219;cell death;1.40187431072051e-21!GO:0016265;death;1.40187431072051e-21!GO:0006464;protein modification process;4.68606809330398e-21!GO:0008134;transcription factor binding;4.97051123741141e-21!GO:0043687;post-translational protein modification;5.74087953733366e-21!GO:0050794;regulation of cellular process;7.15390827527612e-21!GO:0019941;modification-dependent protein catabolic process;2.2097779880092e-20!GO:0043632;modification-dependent macromolecule catabolic process;2.2097779880092e-20!GO:0051603;proteolysis involved in cellular protein catabolic process;2.36211001329569e-20!GO:0006511;ubiquitin-dependent protein catabolic process;2.47776111777471e-20!GO:0044265;cellular macromolecule catabolic process;2.87819676131091e-20!GO:0044257;cellular protein catabolic process;7.28764407946165e-20!GO:0006605;protein targeting;9.01688166514988e-20!GO:0032553;ribonucleotide binding;9.18764158813341e-20!GO:0032555;purine ribonucleotide binding;9.18764158813341e-20!GO:0005740;mitochondrial envelope;1.48478973559247e-19!GO:0016874;ligase activity;1.68057844703647e-19!GO:0017111;nucleoside-triphosphatase activity;2.18606584366897e-19!GO:0005730;nucleolus;2.29479270333229e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.81783157060986e-19!GO:0031966;mitochondrial membrane;2.84557108983695e-19!GO:0016462;pyrophosphatase activity;2.84557108983695e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;3.46146310202291e-19!GO:0006913;nucleocytoplasmic transport;3.53445854003477e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;5.7483575411881e-19!GO:0051169;nuclear transport;7.62067951447536e-19!GO:0043228;non-membrane-bound organelle;8.06985756194862e-19!GO:0043232;intracellular non-membrane-bound organelle;8.06985756194862e-19!GO:0051276;chromosome organization and biogenesis;1.39465505916514e-18!GO:0017076;purine nucleotide binding;1.44984765514624e-18!GO:0016604;nuclear body;2.3596849862294e-18!GO:0006323;DNA packaging;4.11594853988703e-18!GO:0019866;organelle inner membrane;5.14824896425153e-18!GO:0043285;biopolymer catabolic process;9.85113938628403e-18!GO:0022618;protein-RNA complex assembly;1.03337572175175e-17!GO:0019222;regulation of metabolic process;4.40379108838494e-17!GO:0007049;cell cycle;4.71778706563159e-17!GO:0005524;ATP binding;5.87811883638409e-17!GO:0032559;adenyl ribonucleotide binding;2.05702572953745e-16!GO:0006119;oxidative phosphorylation;2.28995441166498e-16!GO:0015934;large ribosomal subunit;2.62366497137137e-16!GO:0008135;translation factor activity, nucleic acid binding;4.27882591371837e-16!GO:0005743;mitochondrial inner membrane;7.05702568000057e-16!GO:0015935;small ribosomal subunit;7.18910934587608e-16!GO:0042981;regulation of apoptosis;1.29303331903562e-15!GO:0016607;nuclear speck;1.67660493323687e-15!GO:0043067;regulation of programmed cell death;1.90971467944696e-15!GO:0009057;macromolecule catabolic process;3.79292285402181e-15!GO:0030554;adenyl nucleotide binding;4.64279545921757e-15!GO:0006974;response to DNA damage stimulus;5.51180140887626e-15!GO:0050789;regulation of biological process;1.19446370925006e-14!GO:0031323;regulation of cellular metabolic process;1.38393946754156e-14!GO:0016887;ATPase activity;2.46647153197434e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.10132760446858e-14!GO:0030163;protein catabolic process;3.40055711649244e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.57154217671611e-14!GO:0044455;mitochondrial membrane part;5.01318473713721e-14!GO:0017038;protein import;7.9325126102075e-14!GO:0006350;transcription;8.18883860057106e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;9.99387861050128e-14!GO:0000375;RNA splicing, via transesterification reactions;9.99387861050128e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.99387861050128e-14!GO:0042623;ATPase activity, coupled;1.06738989597144e-13!GO:0016568;chromatin modification;1.14588315691752e-13!GO:0005635;nuclear envelope;2.80780770557451e-13!GO:0004386;helicase activity;3.53571531336881e-13!GO:0003712;transcription cofactor activity;6.16958157497022e-13!GO:0031965;nuclear membrane;9.91983152018367e-13!GO:0010468;regulation of gene expression;1.57077666861225e-12!GO:0012505;endomembrane system;1.58657611839431e-12!GO:0006281;DNA repair;2.2912611744037e-12!GO:0008639;small protein conjugating enzyme activity;2.65052154879668e-12!GO:0031980;mitochondrial lumen;2.70458808565471e-12!GO:0005759;mitochondrial matrix;2.70458808565471e-12!GO:0005694;chromosome;2.88908368787956e-12!GO:0044453;nuclear membrane part;2.96778649918343e-12!GO:0004842;ubiquitin-protein ligase activity;3.88228338923256e-12!GO:0006457;protein folding;4.06709930077996e-12!GO:0005746;mitochondrial respiratory chain;6.81290316760801e-12!GO:0022402;cell cycle process;7.23745795146283e-12!GO:0006333;chromatin assembly or disassembly;7.53468315630318e-12!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.92370024965279e-12!GO:0006366;transcription from RNA polymerase II promoter;8.18001338163544e-12!GO:0065004;protein-DNA complex assembly;9.36418698748247e-12!GO:0051726;regulation of cell cycle;1.08445162808822e-11!GO:0006793;phosphorus metabolic process;1.13519790181563e-11!GO:0006796;phosphate metabolic process;1.13519790181563e-11!GO:0000502;proteasome complex (sensu Eukaryota);1.26414516548373e-11!GO:0003743;translation initiation factor activity;1.40259866367911e-11!GO:0000074;regulation of progression through cell cycle;2.01659114974175e-11!GO:0044248;cellular catabolic process;2.01659114974175e-11!GO:0019787;small conjugating protein ligase activity;2.08725926422429e-11!GO:0006413;translational initiation;2.22626263896526e-11!GO:0050657;nucleic acid transport;2.58206005759858e-11!GO:0051236;establishment of RNA localization;2.58206005759858e-11!GO:0050658;RNA transport;2.58206005759858e-11!GO:0006403;RNA localization;3.01563725160834e-11!GO:0048523;negative regulation of cellular process;3.35539591712092e-11!GO:0008026;ATP-dependent helicase activity;3.6087754007372e-11!GO:0005643;nuclear pore;5.16899630450534e-11!GO:0006606;protein import into nucleus;6.4799260976235e-11!GO:0032774;RNA biosynthetic process;6.6717753416565e-11!GO:0050136;NADH dehydrogenase (quinone) activity;6.6717753416565e-11!GO:0003954;NADH dehydrogenase activity;6.6717753416565e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.6717753416565e-11!GO:0051170;nuclear import;6.71023377686812e-11!GO:0006446;regulation of translational initiation;6.846926978517e-11!GO:0006351;transcription, DNA-dependent;7.07718318651452e-11!GO:0044427;chromosomal part;1.67760033986409e-10!GO:0045449;regulation of transcription;2.3489934214752e-10!GO:0016310;phosphorylation;4.62268364520588e-10!GO:0008270;zinc ion binding;6.57484992629386e-10!GO:0042254;ribosome biogenesis and assembly;7.22391729980758e-10!GO:0051082;unfolded protein binding;7.91891515498646e-10!GO:0007243;protein kinase cascade;1.06167917473447e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.08388074352273e-09!GO:0048770;pigment granule;1.16746404055404e-09!GO:0042470;melanosome;1.16746404055404e-09!GO:0065007;biological regulation;1.18182564706397e-09!GO:0000785;chromatin;1.28227925975217e-09!GO:0048519;negative regulation of biological process;1.31740882674594e-09!GO:0042775;organelle ATP synthesis coupled electron transport;1.46711739597683e-09!GO:0042773;ATP synthesis coupled electron transport;1.46711739597683e-09!GO:0048193;Golgi vesicle transport;2.05440578399538e-09!GO:0051028;mRNA transport;2.11170304228091e-09!GO:0030964;NADH dehydrogenase complex (quinone);2.90003628057585e-09!GO:0045271;respiratory chain complex I;2.90003628057585e-09!GO:0005747;mitochondrial respiratory chain complex I;2.90003628057585e-09!GO:0009719;response to endogenous stimulus;2.99962402229444e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.76255464156114e-09!GO:0005794;Golgi apparatus;3.85894145913571e-09!GO:0016881;acid-amino acid ligase activity;5.57199294460089e-09!GO:0043566;structure-specific DNA binding;5.8739855913283e-09!GO:0046930;pore complex;6.6258515167225e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.96011832327427e-09!GO:0006355;regulation of transcription, DNA-dependent;7.40309552272216e-09!GO:0016563;transcription activator activity;7.6033145527052e-09!GO:0003713;transcription coactivator activity;7.77666203177584e-09!GO:0031324;negative regulation of cellular metabolic process;7.85200275306487e-09!GO:0065002;intracellular protein transport across a membrane;1.51316079005132e-08!GO:0016564;transcription repressor activity;1.65889129712311e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.65889129712311e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.87074018244646e-08!GO:0003697;single-stranded DNA binding;2.04929844782007e-08!GO:0032446;protein modification by small protein conjugation;2.45708540713472e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.78009182888207e-08!GO:0019829;cation-transporting ATPase activity;3.08201332159198e-08!GO:0045786;negative regulation of progression through cell cycle;3.14268918547716e-08!GO:0043069;negative regulation of programmed cell death;3.25620635197809e-08!GO:0008565;protein transporter activity;4.3271870784661e-08!GO:0043066;negative regulation of apoptosis;5.16574817793732e-08!GO:0016567;protein ubiquitination;5.3248201915607e-08!GO:0005768;endosome;5.76289145622357e-08!GO:0016192;vesicle-mediated transport;5.85509243498508e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.36956533554578e-08!GO:0006916;anti-apoptosis;6.48087548360513e-08!GO:0051246;regulation of protein metabolic process;8.54898324686138e-08!GO:0031497;chromatin assembly;9.93013927187105e-08!GO:0006334;nucleosome assembly;1.03215000548844e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.09627543507564e-07!GO:0007242;intracellular signaling cascade;1.16008617445953e-07!GO:0003677;DNA binding;1.28369433891743e-07!GO:0000151;ubiquitin ligase complex;1.28642235812739e-07!GO:0065009;regulation of a molecular function;1.31705604793391e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.44022595966295e-07!GO:0009892;negative regulation of metabolic process;1.67278177386526e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.79208388253736e-07!GO:0030532;small nuclear ribonucleoprotein complex;2.05241311396722e-07!GO:0019899;enzyme binding;2.1790511930817e-07!GO:0016072;rRNA metabolic process;2.55165723851782e-07!GO:0004674;protein serine/threonine kinase activity;3.18302485076877e-07!GO:0016481;negative regulation of transcription;3.22340443114404e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.365976809482e-07!GO:0006364;rRNA processing;3.54142890889041e-07!GO:0006399;tRNA metabolic process;3.55831146650705e-07!GO:0051168;nuclear export;3.72558793600103e-07!GO:0005761;mitochondrial ribosome;3.80294553522795e-07!GO:0000313;organellar ribosome;3.80294553522795e-07!GO:0051186;cofactor metabolic process;4.72682285801344e-07!GO:0016740;transferase activity;5.17455739190972e-07!GO:0016787;hydrolase activity;5.48256809909053e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.89234663571476e-07!GO:0043065;positive regulation of apoptosis;6.2651638649944e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.30442807031625e-07!GO:0009260;ribonucleotide biosynthetic process;8.51995628722294e-07!GO:0009259;ribonucleotide metabolic process;8.55356699505128e-07!GO:0043068;positive regulation of programmed cell death;9.19881367290869e-07!GO:0006917;induction of apoptosis;9.70191398448434e-07!GO:0044432;endoplasmic reticulum part;1.12629518580258e-06!GO:0046914;transition metal ion binding;1.23983284760971e-06!GO:0000278;mitotic cell cycle;1.27086680681594e-06!GO:0012502;induction of programmed cell death;1.55790598498267e-06!GO:0006260;DNA replication;1.86278817852675e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.15096902669313e-06!GO:0003724;RNA helicase activity;2.212185356384e-06!GO:0009152;purine ribonucleotide biosynthetic process;2.27461906951549e-06!GO:0015986;ATP synthesis coupled proton transport;2.4129433374843e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.4129433374843e-06!GO:0006164;purine nucleotide biosynthetic process;2.75351663507535e-06!GO:0009060;aerobic respiration;3.90115821032281e-06!GO:0005839;proteasome core complex (sensu Eukaryota);4.19650714446058e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.86141916274788e-06!GO:0006401;RNA catabolic process;5.06070071223975e-06!GO:0005783;endoplasmic reticulum;5.06070071223975e-06!GO:0009150;purine ribonucleotide metabolic process;6.22612267125669e-06!GO:0006402;mRNA catabolic process;6.52794522560568e-06!GO:0006163;purine nucleotide metabolic process;6.6618297096897e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.71422870238398e-06!GO:0000245;spliceosome assembly;7.23319765967646e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;7.26920961073216e-06!GO:0015399;primary active transmembrane transporter activity;7.26920961073216e-06!GO:0005789;endoplasmic reticulum membrane;1.04209826665967e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.06117365310042e-05!GO:0016363;nuclear matrix;1.09927772979133e-05!GO:0006754;ATP biosynthetic process;1.13649013337673e-05!GO:0006753;nucleoside phosphate metabolic process;1.13649013337673e-05!GO:0009142;nucleoside triphosphate biosynthetic process;1.28862085997134e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.28862085997134e-05!GO:0009056;catabolic process;1.33202496046517e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.38566541015378e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.38566541015378e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.38566541015378e-05!GO:0006732;coenzyme metabolic process;1.39228349739412e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.417895523124e-05!GO:0004298;threonine endopeptidase activity;1.52339763907858e-05!GO:0005813;centrosome;1.67121326694799e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.6800833782889e-05!GO:0045259;proton-transporting ATP synthase complex;1.78050673961354e-05!GO:0016779;nucleotidyltransferase activity;1.98446042737796e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.16195915834302e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.20908795690606e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.20908795690606e-05!GO:0008234;cysteine-type peptidase activity;3.13564072552715e-05!GO:0009199;ribonucleoside triphosphate metabolic process;3.136994441502e-05!GO:0003714;transcription corepressor activity;3.18030102207048e-05!GO:0043038;amino acid activation;3.39266441503982e-05!GO:0006418;tRNA aminoacylation for protein translation;3.39266441503982e-05!GO:0043039;tRNA aminoacylation;3.39266441503982e-05!GO:0048522;positive regulation of cellular process;3.90632350847961e-05!GO:0045333;cellular respiration;4.28296773451946e-05!GO:0046034;ATP metabolic process;4.30691576392745e-05!GO:0008186;RNA-dependent ATPase activity;4.42933213403963e-05!GO:0009141;nucleoside triphosphate metabolic process;4.42933213403963e-05!GO:0007005;mitochondrion organization and biogenesis;4.98326105773393e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.09337444551133e-05!GO:0009144;purine nucleoside triphosphate metabolic process;5.09337444551133e-05!GO:0005815;microtubule organizing center;5.25728586654536e-05!GO:0005793;ER-Golgi intermediate compartment;5.31116213979382e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.43981489929987e-05!GO:0003924;GTPase activity;5.88691986636957e-05!GO:0006417;regulation of translation;5.95021400325268e-05!GO:0005525;GTP binding;6.07720528218323e-05!GO:0051427;hormone receptor binding;6.20720431503183e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;7.53910585845637e-05!GO:0043492;ATPase activity, coupled to movement of substances;7.91486567418907e-05!GO:0007264;small GTPase mediated signal transduction;8.20249157929959e-05!GO:0048475;coated membrane;8.38671015340335e-05!GO:0030117;membrane coat;8.38671015340335e-05!GO:0006461;protein complex assembly;8.71645674863852e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;9.55433718832904e-05!GO:0003690;double-stranded DNA binding;0.000101643085139807!GO:0003729;mRNA binding;0.000104152497415955!GO:0006352;transcription initiation;0.000106099527063526!GO:0030120;vesicle coat;0.00011203774567284!GO:0030662;coated vesicle membrane;0.00011203774567284!GO:0051188;cofactor biosynthetic process;0.000113431179633776!GO:0060090;molecular adaptor activity;0.000115222031166474!GO:0035257;nuclear hormone receptor binding;0.000119476493895943!GO:0043623;cellular protein complex assembly;0.000121064104214317!GO:0004004;ATP-dependent RNA helicase activity;0.000136551359775041!GO:0005667;transcription factor complex;0.000144550281279596!GO:0006613;cotranslational protein targeting to membrane;0.000152603067737625!GO:0007265;Ras protein signal transduction;0.000154401023626628!GO:0031326;regulation of cellular biosynthetic process;0.000167014972751491!GO:0008632;apoptotic program;0.000172457549440931!GO:0019783;small conjugating protein-specific protease activity;0.000203719907299607!GO:0006099;tricarboxylic acid cycle;0.000221958969955438!GO:0046356;acetyl-CoA catabolic process;0.000221958969955438!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000228692761035493!GO:0005769;early endosome;0.000235590909272302!GO:0016251;general RNA polymerase II transcription factor activity;0.000238822285650943!GO:0044440;endosomal part;0.000241178072569505!GO:0010008;endosome membrane;0.000241178072569505!GO:0005770;late endosome;0.000269839590371291!GO:0006607;NLS-bearing substrate import into nucleus;0.000272528081028892!GO:0050790;regulation of catalytic activity;0.000275635962751466!GO:0022403;cell cycle phase;0.00028837503235227!GO:0042110;T cell activation;0.00029430533930001!GO:0004843;ubiquitin-specific protease activity;0.000302618115014542!GO:0015631;tubulin binding;0.000325192056353007!GO:0030384;phosphoinositide metabolic process;0.000342280851061556!GO:0045892;negative regulation of transcription, DNA-dependent;0.000346686148116354!GO:0006084;acetyl-CoA metabolic process;0.000404985576392735!GO:0005773;vacuole;0.000414144960676398!GO:0006261;DNA-dependent DNA replication;0.000463911045463384!GO:0046822;regulation of nucleocytoplasmic transport;0.000472821877144843!GO:0030695;GTPase regulator activity;0.000473077063031077!GO:0016197;endosome transport;0.000482983210806815!GO:0015630;microtubule cytoskeleton;0.000517650585872104!GO:0009055;electron carrier activity;0.000521551656584887!GO:0009108;coenzyme biosynthetic process;0.000543612775991935!GO:0044431;Golgi apparatus part;0.000569981567704871!GO:0051223;regulation of protein transport;0.000593321275415376!GO:0048471;perinuclear region of cytoplasm;0.000604891703529637!GO:0008017;microtubule binding;0.000633193908374068!GO:0006611;protein export from nucleus;0.000638072804039119!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000638072804039119!GO:0005083;small GTPase regulator activity;0.000713638318005442!GO:0006310;DNA recombination;0.000713638318005442!GO:0006752;group transfer coenzyme metabolic process;0.000713638318005442!GO:0008654;phospholipid biosynthetic process;0.000726303013529073!GO:0032561;guanyl ribonucleotide binding;0.000741759660614602!GO:0019001;guanyl nucleotide binding;0.000741759660614602!GO:0009889;regulation of biosynthetic process;0.000744186442193686!GO:0006891;intra-Golgi vesicle-mediated transport;0.000754242808130215!GO:0004221;ubiquitin thiolesterase activity;0.000760926136587362!GO:0006338;chromatin remodeling;0.000775669407870441!GO:0048518;positive regulation of biological process;0.000775669407870441!GO:0006612;protein targeting to membrane;0.000848832425504076!GO:0022415;viral reproductive process;0.000874762397823699!GO:0006405;RNA export from nucleus;0.000977515012018568!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00100780519429093!GO:0009966;regulation of signal transduction;0.00100780519429093!GO:0007050;cell cycle arrest;0.00101838951825949!GO:0000786;nucleosome;0.00104829959781894!GO:0016301;kinase activity;0.00105157106640457!GO:0000087;M phase of mitotic cell cycle;0.00109311241425131!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00110031334973955!GO:0009109;coenzyme catabolic process;0.00110713371590746!GO:0048468;cell development;0.00118070168560783!GO:0006414;translational elongation;0.00125163247380042!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00126664756310451!GO:0009967;positive regulation of signal transduction;0.00128367155643885!GO:0005885;Arp2/3 protein complex;0.00132687690025458!GO:0009615;response to virus;0.00135732955030113!GO:0007067;mitosis;0.00137474227660989!GO:0046966;thyroid hormone receptor binding;0.00142563913033665!GO:0051252;regulation of RNA metabolic process;0.0014311463512349!GO:0045941;positive regulation of transcription;0.00146124254473839!GO:0051251;positive regulation of lymphocyte activation;0.00156565281069935!GO:0043021;ribonucleoprotein binding;0.00158064582949306!GO:0006650;glycerophospholipid metabolic process;0.00163580428180459!GO:0046649;lymphocyte activation;0.00169027880719431!GO:0051301;cell division;0.00174478570394902!GO:0031625;ubiquitin protein ligase binding;0.00179110387370258!GO:0031072;heat shock protein binding;0.00179110387370258!GO:0003746;translation elongation factor activity;0.00187700877991632!GO:0000323;lytic vacuole;0.00189078393152812!GO:0005764;lysosome;0.00189078393152812!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00191434178882427!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0019234952025641!GO:0030518;steroid hormone receptor signaling pathway;0.00196621037135737!GO:0051187;cofactor catabolic process;0.00198411993411905!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00224162281670158!GO:0051090;regulation of transcription factor activity;0.00231368497042474!GO:0003682;chromatin binding;0.00250588738530023!GO:0005637;nuclear inner membrane;0.00250588738530023!GO:0042802;identical protein binding;0.00260112829906638!GO:0005684;U2-dependent spliceosome;0.00278939551528312!GO:0043488;regulation of mRNA stability;0.00278939551528312!GO:0043487;regulation of RNA stability;0.00278939551528312!GO:0008022;protein C-terminus binding;0.00278939551528312!GO:0051789;response to protein stimulus;0.00278939551528312!GO:0006986;response to unfolded protein;0.00278939551528312!GO:0003899;DNA-directed RNA polymerase activity;0.00279261483346678!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00279261483346678!GO:0046489;phosphoinositide biosynthetic process;0.00280321093830096!GO:0008168;methyltransferase activity;0.00285927774623494!GO:0016741;transferase activity, transferring one-carbon groups;0.0029316770108915!GO:0005741;mitochondrial outer membrane;0.00298626147833954!GO:0008139;nuclear localization sequence binding;0.00301638676148107!GO:0008047;enzyme activator activity;0.00303340138688541!GO:0005070;SH3/SH2 adaptor activity;0.00309975372670548!GO:0045893;positive regulation of transcription, DNA-dependent;0.00315600303339867!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00325666585713508!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00325666585713508!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00325666585713508!GO:0019867;outer membrane;0.0032712860114481!GO:0016790;thiolester hydrolase activity;0.0032712860114481!GO:0019843;rRNA binding;0.00327563781971595!GO:0006383;transcription from RNA polymerase III promoter;0.00331570626148389!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00333721106075288!GO:0044452;nucleolar part;0.00352760494495618!GO:0005048;signal sequence binding;0.00374904486616768!GO:0016585;chromatin remodeling complex;0.00377936770681004!GO:0006818;hydrogen transport;0.00382269631243345!GO:0016584;nucleosome positioning;0.00388141111553383!GO:0030521;androgen receptor signaling pathway;0.00398507880223155!GO:0005774;vacuolar membrane;0.00427071303002121!GO:0031968;organelle outer membrane;0.00428673413661157!GO:0043681;protein import into mitochondrion;0.00438186621037782!GO:0015992;proton transport;0.00485450786223584!GO:0033157;regulation of intracellular protein transport;0.00511256141711346!GO:0042306;regulation of protein import into nucleus;0.00511256141711346!GO:0008287;protein serine/threonine phosphatase complex;0.00524027079512326!GO:0043414;biopolymer methylation;0.0052478025887978!GO:0005669;transcription factor TFIID complex;0.00528292946923897!GO:0051329;interphase of mitotic cell cycle;0.0054924007567873!GO:0019901;protein kinase binding;0.0054924007567873!GO:0005798;Golgi-associated vesicle;0.0054924007567873!GO:0006468;protein amino acid phosphorylation;0.00552529671084294!GO:0005762;mitochondrial large ribosomal subunit;0.00555877792992781!GO:0000315;organellar large ribosomal subunit;0.00555877792992781!GO:0000139;Golgi membrane;0.00582448201837588!GO:0046474;glycerophospholipid biosynthetic process;0.00589872297904565!GO:0008033;tRNA processing;0.00590206488769583!GO:0030522;intracellular receptor-mediated signaling pathway;0.00618330757184238!GO:0008624;induction of apoptosis by extracellular signals;0.00619776994143324!GO:0033549;MAP kinase phosphatase activity;0.00639967047810975!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.00639967047810975!GO:0043621;protein self-association;0.00648264781320872!GO:0051059;NF-kappaB binding;0.00656166447266565!GO:0032259;methylation;0.00675048911725004!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00679262891222255!GO:0008276;protein methyltransferase activity;0.0071015941482064!GO:0042101;T cell receptor complex;0.00711460293635532!GO:0045603;positive regulation of endothelial cell differentiation;0.0071216377014546!GO:0019210;kinase inhibitor activity;0.00720727324868085!GO:0003711;transcription elongation regulator activity;0.00753253335188776!GO:0016311;dephosphorylation;0.00765370615864976!GO:0030258;lipid modification;0.00765964240331238!GO:0004722;protein serine/threonine phosphatase activity;0.00765964240331238!GO:0000287;magnesium ion binding;0.00774316336904187!GO:0004527;exonuclease activity;0.00795553730660021!GO:0048500;signal recognition particle;0.00820409320426835!GO:0031252;leading edge;0.00834456024847676!GO:0005765;lysosomal membrane;0.00903620150887594!GO:0044437;vacuolar part;0.00910796812765924!GO:0032200;telomere organization and biogenesis;0.00924541556598048!GO:0000723;telomere maintenance;0.00924541556598048!GO:0001772;immunological synapse;0.00939627587314905!GO:0030658;transport vesicle membrane;0.00939627587314905!GO:0051336;regulation of hydrolase activity;0.00952047736952852!GO:0000049;tRNA binding;0.00960904753202156!GO:0000118;histone deacetylase complex;0.00973311766575077!GO:0004860;protein kinase inhibitor activity;0.0097720315203562!GO:0022890;inorganic cation transmembrane transporter activity;0.00999251362503414!GO:0003684;damaged DNA binding;0.0101236682662192!GO:0005657;replication fork;0.0101652200634198!GO:0051052;regulation of DNA metabolic process;0.010511517369942!GO:0006376;mRNA splice site selection;0.0105686147981236!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0105686147981236!GO:0032508;DNA duplex unwinding;0.0106383865823037!GO:0032392;DNA geometric change;0.0106383865823037!GO:0043433;negative regulation of transcription factor activity;0.0107096977892913!GO:0017091;AU-rich element binding;0.0107096977892913!GO:0050779;RNA destabilization;0.0107096977892913!GO:0000289;poly(A) tail shortening;0.0107096977892913!GO:0000279;M phase;0.0110971098018487!GO:0051098;regulation of binding;0.0113525503340677!GO:0051325;interphase;0.0113534709373986!GO:0009893;positive regulation of metabolic process;0.0114598884943769!GO:0051539;4 iron, 4 sulfur cluster binding;0.0114598884943769!GO:0000781;chromosome, telomeric region;0.0114598884943769!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.011623201198109!GO:0051235;maintenance of localization;0.011623201198109!GO:0000082;G1/S transition of mitotic cell cycle;0.0116552396074498!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0118497373547082!GO:0046983;protein dimerization activity;0.0119703011773993!GO:0004518;nuclease activity;0.012043165182877!GO:0019904;protein domain specific binding;0.0122010047188481!GO:0048487;beta-tubulin binding;0.0122395994432981!GO:0040029;regulation of gene expression, epigenetic;0.0122395994432981!GO:0003702;RNA polymerase II transcription factor activity;0.0122395994432981!GO:0006302;double-strand break repair;0.0126227251650748!GO:0042990;regulation of transcription factor import into nucleus;0.0126278658909824!GO:0042991;transcription factor import into nucleus;0.0126278658909824!GO:0016791;phosphoric monoester hydrolase activity;0.0127199713965709!GO:0006919;caspase activation;0.0127348964864215!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0129666449887202!GO:0000209;protein polyubiquitination;0.0130628496889073!GO:0050852;T cell receptor signaling pathway;0.0131022375142194!GO:0033116;ER-Golgi intermediate compartment membrane;0.0132058863256995!GO:0046854;phosphoinositide phosphorylation;0.0133488840832465!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0135282249025992!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0135282249025992!GO:0050811;GABA receptor binding;0.0136845432276375!GO:0031902;late endosome membrane;0.0142791778291512!GO:0000119;mediator complex;0.0143651332894759!GO:0019900;kinase binding;0.0144506818927021!GO:0047485;protein N-terminus binding;0.0146854020507016!GO:0006839;mitochondrial transport;0.0147276766967615!GO:0015923;mannosidase activity;0.0149657045973394!GO:0003678;DNA helicase activity;0.0150023886298852!GO:0030660;Golgi-associated vesicle membrane;0.0150199997301557!GO:0045321;leukocyte activation;0.0154139278956461!GO:0005819;spindle;0.0154558250434499!GO:0007034;vacuolar transport;0.0154558250434499!GO:0009117;nucleotide metabolic process;0.0156284406658072!GO:0008312;7S RNA binding;0.0160508066575105!GO:0003725;double-stranded RNA binding;0.0166072159329574!GO:0030118;clathrin coat;0.0170347660829566!GO:0006626;protein targeting to mitochondrion;0.0170347660829566!GO:0005869;dynactin complex;0.0170485371423346!GO:0050870;positive regulation of T cell activation;0.0170485371423346!GO:0033673;negative regulation of kinase activity;0.0170528857114555!GO:0006469;negative regulation of protein kinase activity;0.0170528857114555!GO:0016279;protein-lysine N-methyltransferase activity;0.0170528857114555!GO:0018024;histone-lysine N-methyltransferase activity;0.0170528857114555!GO:0016278;lysine N-methyltransferase activity;0.0170528857114555!GO:0046467;membrane lipid biosynthetic process;0.0171704711636148!GO:0000059;protein import into nucleus, docking;0.0172737500522622!GO:0007006;mitochondrial membrane organization and biogenesis;0.0174618558260391!GO:0000314;organellar small ribosomal subunit;0.0176654546531519!GO:0005763;mitochondrial small ribosomal subunit;0.0176654546531519!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.017782288129362!GO:0046834;lipid phosphorylation;0.0184718699146095!GO:0004721;phosphoprotein phosphatase activity;0.0185556939645757!GO:0006354;RNA elongation;0.0185556939645757!GO:0031461;cullin-RING ubiquitin ligase complex;0.0188358859703991!GO:0051087;chaperone binding;0.0189698875487089!GO:0032386;regulation of intracellular transport;0.0196863893049753!GO:0043281;regulation of caspase activity;0.0197110725035676!GO:0051092;activation of NF-kappaB transcription factor;0.01979098344626!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0198125776125747!GO:0045047;protein targeting to ER;0.0198125776125747!GO:0016569;covalent chromatin modification;0.0198352793262101!GO:0005096;GTPase activator activity;0.0201243952236428!GO:0043549;regulation of kinase activity;0.0210183518492911!GO:0007004;telomere maintenance via telomerase;0.0211372382742051!GO:0008637;apoptotic mitochondrial changes;0.0212384310049994!GO:0032507;maintenance of cellular protein localization;0.0212754550704281!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.021448072548463!GO:0051338;regulation of transferase activity;0.021448072548463!GO:0006289;nucleotide-excision repair;0.021488391742724!GO:0043280;positive regulation of caspase activity;0.0222724119866527!GO:0006984;ER-nuclear signaling pathway;0.0224610442642676!GO:0019058;viral infectious cycle;0.0227463664428765!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0230161400822557!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0237412932564816!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0241383666968661!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0244503873377713!GO:0031647;regulation of protein stability;0.0249625666942865!GO:0016570;histone modification;0.0251586105703802!GO:0030880;RNA polymerase complex;0.0254744553896299!GO:0006406;mRNA export from nucleus;0.0258410084574133!GO:0016605;PML body;0.0260871459885224!GO:0046426;negative regulation of JAK-STAT cascade;0.0271556230124935!GO:0043022;ribosome binding;0.0271967675222888!GO:0043087;regulation of GTPase activity;0.0277022028092133!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0279057059213327!GO:0006595;polyamine metabolic process;0.0283471320733141!GO:0030127;COPII vesicle coat;0.0284555956286459!GO:0012507;ER to Golgi transport vesicle membrane;0.0284555956286459!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0285143639618668!GO:0015002;heme-copper terminal oxidase activity;0.0285143639618668!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0285143639618668!GO:0004129;cytochrome-c oxidase activity;0.0285143639618668!GO:0016788;hydrolase activity, acting on ester bonds;0.0287956859152697!GO:0004177;aminopeptidase activity;0.0288031858631301!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0289897646041565!GO:0042054;histone methyltransferase activity;0.0292117627712188!GO:0004197;cysteine-type endopeptidase activity;0.0292117627712188!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.030130430864551!GO:0045185;maintenance of protein localization;0.0303558638188763!GO:0016859;cis-trans isomerase activity;0.0304004704652913!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0311072600187452!GO:0000776;kinetochore;0.0316288412793446!GO:0050865;regulation of cell activation;0.0318727032345555!GO:0006470;protein amino acid dephosphorylation;0.0319142534180392!GO:0006268;DNA unwinding during replication;0.0320955268378792!GO:0030968;unfolded protein response;0.032201417633127!GO:0004402;histone acetyltransferase activity;0.0322370435601146!GO:0004468;lysine N-acetyltransferase activity;0.0322370435601146!GO:0008097;5S rRNA binding;0.0323531933483494!GO:0051249;regulation of lymphocyte activation;0.0323531933483494!GO:0005521;lamin binding;0.0324528898254861!GO:0030134;ER to Golgi transport vesicle;0.0327689693497871!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0335281609011042!GO:0006672;ceramide metabolic process;0.0340559490494348!GO:0051348;negative regulation of transferase activity;0.0341680112375545!GO:0033239;negative regulation of amine metabolic process;0.0342979427529205!GO:0045763;negative regulation of amino acid metabolic process;0.0342979427529205!GO:0001933;negative regulation of protein amino acid phosphorylation;0.0342979427529205!GO:0042608;T cell receptor binding;0.035328020887782!GO:0000303;response to superoxide;0.0356063911775662!GO:0045815;positive regulation of gene expression, epigenetic;0.0359368369010891!GO:0031901;early endosome membrane;0.0359481578135251!GO:0006013;mannose metabolic process;0.0360932233905385!GO:0009116;nucleoside metabolic process;0.0363172422467254!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0363596294494747!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0363596294494747!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0363596294494747!GO:0051651;maintenance of cellular localization;0.0364447365626789!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0365848544959992!GO:0045859;regulation of protein kinase activity;0.0371642759389472!GO:0030145;manganese ion binding;0.0372066903718684!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0372366662758612!GO:0000428;DNA-directed RNA polymerase complex;0.0372366662758612!GO:0030217;T cell differentiation;0.0375141174703838!GO:0015980;energy derivation by oxidation of organic compounds;0.037694809945971!GO:0046979;TAP2 binding;0.037694809945971!GO:0046977;TAP binding;0.037694809945971!GO:0046978;TAP1 binding;0.037694809945971!GO:0042393;histone binding;0.0377575869618795!GO:0030433;ER-associated protein catabolic process;0.0378561811412707!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0378561811412707!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0378986308141363!GO:0042809;vitamin D receptor binding;0.0380218979295781!GO:0019079;viral genome replication;0.0381603031070076!GO:0035258;steroid hormone receptor binding;0.0382783479776075!GO:0046519;sphingoid metabolic process;0.038505996731971!GO:0046578;regulation of Ras protein signal transduction;0.0386772500335077!GO:0006661;phosphatidylinositol biosynthetic process;0.0393315793305017!GO:0008536;Ran GTPase binding;0.0393858113261705!GO:0031325;positive regulation of cellular metabolic process;0.0404714057562471!GO:0045746;negative regulation of Notch signaling pathway;0.0406613007352761!GO:0000060;protein import into nucleus, translocation;0.0418887283824763!GO:0016272;prefoldin complex;0.0420167248371714!GO:0006278;RNA-dependent DNA replication;0.0422493366512305!GO:0001667;ameboidal cell migration;0.0424477811512443!GO:0032027;myosin light chain binding;0.0424477811512443!GO:0030097;hemopoiesis;0.0424696100909837!GO:0008138;protein tyrosine/serine/threonine phosphatase activity;0.0426802489740707!GO:0006914;autophagy;0.043312343044456!GO:0016853;isomerase activity;0.0436363411167035!GO:0009165;nucleotide biosynthetic process;0.0441742610081827!GO:0050863;regulation of T cell activation;0.0444249507125884!GO:0045792;negative regulation of cell size;0.0446583147921486!GO:0006506;GPI anchor biosynthetic process;0.0460919417878621!GO:0051051;negative regulation of transport;0.0465409209468238!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0469131570693791!GO:0030137;COPI-coated vesicle;0.0469672678586662!GO:0045947;negative regulation of translational initiation;0.0480379921186475!GO:0001819;positive regulation of cytokine production;0.0483954251220326!GO:0051457;maintenance of protein localization in nucleus;0.0486664581247518!GO:0006505;GPI anchor metabolic process;0.0487234917276323!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0490360962630181!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0490360962630181!GO:0016763;transferase activity, transferring pentosyl groups;0.0491716897098843!GO:0022406;membrane docking;0.0492940624023676!GO:0048278;vesicle docking;0.0492940624023676!GO:0000738;DNA catabolic process, exonucleolytic;0.0493264051183816!GO:0006284;base-excision repair;0.0494453979778715 | |||
|sample_id=11306 | |sample_id=11306 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=PITX1..3:3.76748161535;FOX{D1,D2}:3.33747208357;PAX3,7:3.2424757632;BPTF:3.22719722364;CREB1:3.18441851256;ZBTB16:3.13075750659;FOXP1:3.10521665664;ATF4:3.00714692119;ATF5_CREB3:2.70734267244;RORA:2.69300340595;NKX6-1,2:2.58630877255;RFX2..5_RFXANK_RFXAP:2.57756131989;FOXO1,3,4:2.49023030245;RUNX1..3:2.44663582031;TOPORS:2.43664595371;CDX1,2,4:2.32625295977;FOXN1:2.29137633295;FOX{F1,F2,J1}:2.25432862372;IKZF2:2.10632344122;NFKB1_REL_RELA:1.92487469291;RFX1:1.74992337337;ELF1,2,4:1.73310744319;PAX2:1.69501502912;DMAP1_NCOR{1,2}_SMARC:1.68951782979;PAX4:1.64257183886;ETS1,2:1.45748122149;NKX2-1,4:1.43736876876;HMX1:1.43491453099;AIRE:1.41269380195;BREu{core}:1.40965051082;LEF1_TCF7_TCF7L1,2:1.31506612219;JUN:1.25791550514;SPI1:1.25710328027;T:1.17952281579;ATF2:1.10514154122;ATF6:1.09252165512;TGIF1:1.07033419591;TBX4,5:1.06973480771;FOX{I1,J2}:1.06720152498;ZNF384:0.969292505206;SPIB:0.85217449414;NKX3-1:0.84541729239;HBP1_HMGB_SSRP1_UBTF:0.803152569042;IRF1,2:0.76909582363;RREB1:0.724842329354;NFIL3:0.701270802505;HIF1A:0.699015852697;FOXD3:0.683830451432;HOXA9_MEIS1:0.682531920314;EGR1..3:0.654744215404;PAX6:0.586136129616;GATA6:0.522271142375;TLX2:0.472733692273;EP300:0.449994385756;ZEB1:0.44341794563;POU3F1..4:0.40754592559;NFATC1..3:0.406258156669;SMAD1..7,9:0.39927223307;MAFB:0.380662011939;HOX{A6,A7,B6,B7}:0.365938600324;NFE2L1:0.342138715566;NANOG{mouse}:0.322244490093;SOX5:0.294444868317;SREBF1,2:0.292768936843;HMGA1,2:0.267147179515;PDX1:0.262980205445;MYB:0.237497274314;SNAI1..3:0.215619599162;NFIX:0.203518097929;CUX2:0.132869625896;FOSL2:0.116010450664;SPZ1:0.113669351639;POU2F1..3:0.0873189688221;MYFfamily:0.0831515126348;IRF7:0.0567673224198;FOXQ1:0.049214840308;FOXP3:0.0254381274744;AHR_ARNT_ARNT2:0.0202902299843;FOS_FOS{B,L1}_JUN{B,D}:0.019953161362;SOX2:-0.0320005634328;CRX:-0.0486080603181;NR5A1,2:-0.0573322810873;EVI1:-0.0826529481661;ELK1,4_GABP{A,B1}:-0.0879207672844;STAT5{A,B}:-0.0931217976956;LMO2:-0.100384521994;DBP:-0.144112284995;STAT2,4,6:-0.161253660771;PBX1:-0.16126644093;BACH2:-0.16735391253;HES1:-0.176353228974;FOXM1:-0.188569451716;MED-1{core}:-0.213156437969;PPARG:-0.223750369705;MTE{core}:-0.307526321299;E2F1..5:-0.314024215206;FOXL1:-0.319218658348;NKX2-2,8:-0.323673782577;POU1F1:-0.333322434598;YY1:-0.372167976173;NFE2:-0.384597227705;GCM1,2:-0.395740234754;CEBPA,B_DDIT3:-0.420374497119;UFEwm:-0.42264343335;HNF4A_NR2F1,2:-0.430233915604;GATA4:-0.453476329176;NR6A1:-0.464103799217;AR:-0.484960400864;OCT4_SOX2{dimer}:-0.491470328321;NRF1:-0.5184021076;SRF:-0.521863214937;MZF1:-0.532630484064;NFY{A,B,C}:-0.540230233864;ZFP161:-0.543421957915;TFDP1:-0.550608664231;bHLH_family:-0.604921833602;ALX4:-0.61245101332;MYOD1:-0.617923604365;ZBTB6:-0.663890429885;RXRA_VDR{dimer}:-0.670084447274;PAX5:-0.701738627638;HNF1A:-0.711744951135;GLI1..3:-0.780541022607;HLF:-0.812062941653;NFE2L2:-0.833463591013;STAT1,3:-0.834298324604;PATZ1:-0.863167576922;NHLH1,2:-0.866753990465;HAND1,2:-0.872448267738;TAL1_TCF{3,4,12}:-0.881141449221;SOX{8,9,10}:-0.917831815418;FOXA2:-0.948743783117;PRRX1,2:-0.964028826726;TFAP2B:-0.979418850726;POU6F1:-0.999442750987;NANOG:-1.00612535314;ONECUT1,2:-1.00833854872;MTF1:-1.00889825486;REST:-1.02072849633;RBPJ:-1.0441438962;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.05263970815;ZNF423:-1.08199280579;MEF2{A,B,C,D}:-1.09286388893;PAX8:-1.0933435722;ARID5B:-1.16489957486;TFAP4:-1.18313586941;ZNF143:-1.19897367129;ZIC1..3:-1.21661974399;LHX3,4:-1.26182896437;TEF:-1.27174576936;TFAP2{A,C}:-1.28665105149;MAZ:-1.30138020792;ALX1:-1.30175200996;SOX17:-1.32109216943;SP1:-1.34894884126;MYBL2:-1.3542980229;TBP:-1.36377240612;XBP1:-1.37738444422;GFI1B:-1.40746578734;GFI1:-1.480651115;CDC5L:-1.48829779966;HIC1:-1.51530876627;POU5F1:-1.57819188516;HOX{A5,B5}:-1.58246540508;NR1H4:-1.60630866474;XCPE1{core}:-1.60997815662;HSF1,2:-1.64141519622;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.65002444781;TP53:-1.65969122936;PRDM1:-1.66327058219;ZNF238:-1.67550988772;TFCP2:-1.68470669872;NKX2-3_NKX2-5:-1.7036846249;ADNP_IRX_SIX_ZHX:-1.70775823548;TEAD1:-1.72299979456;TLX1..3_NFIC{dimer}:-1.74099136856;KLF4:-1.78612101907;GTF2A1,2:-1.82598543425;GTF2I:-1.86496625654;ZNF148:-1.94069867522;NKX3-2:-1.95091448313;VSX1,2:-1.97673980089;HOX{A4,D4}:-2.00383992988;EN1,2:-2.09727547897;RXR{A,B,G}:-2.15806245002;ESR1:-2.17892488408;ESRRA:-2.18888128933;GZF1:-2.20938519516;EBF1:-2.28316104604;IKZF1:-2.58281045826;NR3C1:-3.03722478138;PAX1,9:-3.0730478509 | |top_motifs=PITX1..3:3.76748161535;FOX{D1,D2}:3.33747208357;PAX3,7:3.2424757632;BPTF:3.22719722364;CREB1:3.18441851256;ZBTB16:3.13075750659;FOXP1:3.10521665664;ATF4:3.00714692119;ATF5_CREB3:2.70734267244;RORA:2.69300340595;NKX6-1,2:2.58630877255;RFX2..5_RFXANK_RFXAP:2.57756131989;FOXO1,3,4:2.49023030245;RUNX1..3:2.44663582031;TOPORS:2.43664595371;CDX1,2,4:2.32625295977;FOXN1:2.29137633295;FOX{F1,F2,J1}:2.25432862372;IKZF2:2.10632344122;NFKB1_REL_RELA:1.92487469291;RFX1:1.74992337337;ELF1,2,4:1.73310744319;PAX2:1.69501502912;DMAP1_NCOR{1,2}_SMARC:1.68951782979;PAX4:1.64257183886;ETS1,2:1.45748122149;NKX2-1,4:1.43736876876;HMX1:1.43491453099;AIRE:1.41269380195;BREu{core}:1.40965051082;LEF1_TCF7_TCF7L1,2:1.31506612219;JUN:1.25791550514;SPI1:1.25710328027;T:1.17952281579;ATF2:1.10514154122;ATF6:1.09252165512;TGIF1:1.07033419591;TBX4,5:1.06973480771;FOX{I1,J2}:1.06720152498;ZNF384:0.969292505206;SPIB:0.85217449414;NKX3-1:0.84541729239;HBP1_HMGB_SSRP1_UBTF:0.803152569042;IRF1,2:0.76909582363;RREB1:0.724842329354;NFIL3:0.701270802505;HIF1A:0.699015852697;FOXD3:0.683830451432;HOXA9_MEIS1:0.682531920314;EGR1..3:0.654744215404;PAX6:0.586136129616;GATA6:0.522271142375;TLX2:0.472733692273;EP300:0.449994385756;ZEB1:0.44341794563;POU3F1..4:0.40754592559;NFATC1..3:0.406258156669;SMAD1..7,9:0.39927223307;MAFB:0.380662011939;HOX{A6,A7,B6,B7}:0.365938600324;NFE2L1:0.342138715566;NANOG{mouse}:0.322244490093;SOX5:0.294444868317;SREBF1,2:0.292768936843;HMGA1,2:0.267147179515;PDX1:0.262980205445;MYB:0.237497274314;SNAI1..3:0.215619599162;NFIX:0.203518097929;CUX2:0.132869625896;FOSL2:0.116010450664;SPZ1:0.113669351639;POU2F1..3:0.0873189688221;MYFfamily:0.0831515126348;IRF7:0.0567673224198;FOXQ1:0.049214840308;FOXP3:0.0254381274744;AHR_ARNT_ARNT2:0.0202902299843;FOS_FOS{B,L1}_JUN{B,D}:0.019953161362;SOX2:-0.0320005634328;CRX:-0.0486080603181;NR5A1,2:-0.0573322810873;EVI1:-0.0826529481661;ELK1,4_GABP{A,B1}:-0.0879207672844;STAT5{A,B}:-0.0931217976956;LMO2:-0.100384521994;DBP:-0.144112284995;STAT2,4,6:-0.161253660771;PBX1:-0.16126644093;BACH2:-0.16735391253;HES1:-0.176353228974;FOXM1:-0.188569451716;MED-1{core}:-0.213156437969;PPARG:-0.223750369705;MTE{core}:-0.307526321299;E2F1..5:-0.314024215206;FOXL1:-0.319218658348;NKX2-2,8:-0.323673782577;POU1F1:-0.333322434598;YY1:-0.372167976173;NFE2:-0.384597227705;GCM1,2:-0.395740234754;CEBPA,B_DDIT3:-0.420374497119;UFEwm:-0.42264343335;HNF4A_NR2F1,2:-0.430233915604;GATA4:-0.453476329176;NR6A1:-0.464103799217;AR:-0.484960400864;OCT4_SOX2{dimer}:-0.491470328321;NRF1:-0.5184021076;SRF:-0.521863214937;MZF1:-0.532630484064;NFY{A,B,C}:-0.540230233864;ZFP161:-0.543421957915;TFDP1:-0.550608664231;bHLH_family:-0.604921833602;ALX4:-0.61245101332;MYOD1:-0.617923604365;ZBTB6:-0.663890429885;RXRA_VDR{dimer}:-0.670084447274;PAX5:-0.701738627638;HNF1A:-0.711744951135;GLI1..3:-0.780541022607;HLF:-0.812062941653;NFE2L2:-0.833463591013;STAT1,3:-0.834298324604;PATZ1:-0.863167576922;NHLH1,2:-0.866753990465;HAND1,2:-0.872448267738;TAL1_TCF{3,4,12}:-0.881141449221;SOX{8,9,10}:-0.917831815418;FOXA2:-0.948743783117;PRRX1,2:-0.964028826726;TFAP2B:-0.979418850726;POU6F1:-0.999442750987;NANOG:-1.00612535314;ONECUT1,2:-1.00833854872;MTF1:-1.00889825486;REST:-1.02072849633;RBPJ:-1.0441438962;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.05263970815;ZNF423:-1.08199280579;MEF2{A,B,C,D}:-1.09286388893;PAX8:-1.0933435722;ARID5B:-1.16489957486;TFAP4:-1.18313586941;ZNF143:-1.19897367129;ZIC1..3:-1.21661974399;LHX3,4:-1.26182896437;TEF:-1.27174576936;TFAP2{A,C}:-1.28665105149;MAZ:-1.30138020792;ALX1:-1.30175200996;SOX17:-1.32109216943;SP1:-1.34894884126;MYBL2:-1.3542980229;TBP:-1.36377240612;XBP1:-1.37738444422;GFI1B:-1.40746578734;GFI1:-1.480651115;CDC5L:-1.48829779966;HIC1:-1.51530876627;POU5F1:-1.57819188516;HOX{A5,B5}:-1.58246540508;NR1H4:-1.60630866474;XCPE1{core}:-1.60997815662;HSF1,2:-1.64141519622;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.65002444781;TP53:-1.65969122936;PRDM1:-1.66327058219;ZNF238:-1.67550988772;TFCP2:-1.68470669872;NKX2-3_NKX2-5:-1.7036846249;ADNP_IRX_SIX_ZHX:-1.70775823548;TEAD1:-1.72299979456;TLX1..3_NFIC{dimer}:-1.74099136856;KLF4:-1.78612101907;GTF2A1,2:-1.82598543425;GTF2I:-1.86496625654;ZNF148:-1.94069867522;NKX3-2:-1.95091448313;VSX1,2:-1.97673980089;HOX{A4,D4}:-2.00383992988;EN1,2:-2.09727547897;RXR{A,B,G}:-2.15806245002;ESR1:-2.17892488408;ESRRA:-2.18888128933;GZF1:-2.20938519516;EBF1:-2.28316104604;IKZF1:-2.58281045826;NR3C1:-3.03722478138;PAX1,9:-3.0730478509 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11306-117C1;search_select_hide=table117:FF:11306-117C1 | |||
}} | }} | ||
Latest revision as of 16:32, 3 June 2020
| Name: | CD4+ T Cells, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11955 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11955
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11955
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.638 |
| 10 | 10 | 0.00777 |
| 100 | 100 | 0.456 |
| 101 | 101 | 0.114 |
| 102 | 102 | 0.784 |
| 103 | 103 | 0.294 |
| 104 | 104 | 0.899 |
| 105 | 105 | 0.852 |
| 106 | 106 | 0.22 |
| 107 | 107 | 0.143 |
| 108 | 108 | 0.966 |
| 109 | 109 | 0.795 |
| 11 | 11 | 0.487 |
| 110 | 110 | 0.596 |
| 111 | 111 | 0.291 |
| 112 | 112 | 0.897 |
| 113 | 113 | 0.252 |
| 114 | 114 | 0.619 |
| 115 | 115 | 0.778 |
| 116 | 116 | 0.473 |
| 117 | 117 | 0.00574 |
| 118 | 118 | 0.386 |
| 119 | 119 | 0.812 |
| 12 | 12 | 0.703 |
| 120 | 120 | 0.432 |
| 121 | 121 | 0.798 |
| 122 | 122 | 0.604 |
| 123 | 123 | 7.16985e-8 |
| 124 | 124 | 0.769 |
| 125 | 125 | 0.911 |
| 126 | 126 | 0.936 |
| 127 | 127 | 0.254 |
| 128 | 128 | 0.998 |
| 129 | 129 | 0.433 |
| 13 | 13 | 0.562 |
| 130 | 130 | 0.165 |
| 131 | 131 | 0.796 |
| 132 | 132 | 0.342 |
| 133 | 133 | 0.673 |
| 134 | 134 | 0.808 |
| 135 | 135 | 0.271 |
| 136 | 136 | 0.936 |
| 137 | 137 | 0.0371 |
| 138 | 138 | 0.476 |
| 139 | 139 | 0.0893 |
| 14 | 14 | 0.595 |
| 140 | 140 | 0.323 |
| 141 | 141 | 0.928 |
| 142 | 142 | 0.333 |
| 143 | 143 | 0.147 |
| 144 | 144 | 0.845 |
| 145 | 145 | 0.907 |
| 146 | 146 | 0.342 |
| 147 | 147 | 0.0608 |
| 148 | 148 | 0.216 |
| 149 | 149 | 0.235 |
| 15 | 15 | 0.339 |
| 150 | 150 | 0.96 |
| 151 | 151 | 0.49 |
| 152 | 152 | 0.524 |
| 153 | 153 | 0.386 |
| 154 | 154 | 0.0708 |
| 155 | 155 | 0.112 |
| 156 | 156 | 0.749 |
| 157 | 157 | 0.757 |
| 158 | 158 | 0.00869 |
| 159 | 159 | 0.895 |
| 16 | 16 | 0.307 |
| 160 | 160 | 0.237 |
| 161 | 161 | 0.468 |
| 162 | 162 | 0.0942 |
| 163 | 163 | 0.874 |
| 164 | 164 | 0.0312 |
| 165 | 165 | 0.936 |
| 166 | 166 | 0.404 |
| 167 | 167 | 0.0744 |
| 168 | 168 | 0.412 |
| 169 | 169 | 0.28 |
| 17 | 17 | 0.66 |
| 18 | 18 | 0.59 |
| 19 | 19 | 0.0802 |
| 2 | 2 | 0.182 |
| 20 | 20 | 0.144 |
| 21 | 21 | 0.59 |
| 22 | 22 | 0.193 |
| 23 | 23 | 0.764 |
| 24 | 24 | 0.387 |
| 25 | 25 | 0.196 |
| 26 | 26 | 0.592 |
| 27 | 27 | 0.6 |
| 28 | 28 | 0.394 |
| 29 | 29 | 0.0568 |
| 3 | 3 | 0.337 |
| 30 | 30 | 0.0178 |
| 31 | 31 | 0.523 |
| 32 | 32 | 0.0454 |
| 33 | 33 | 0.461 |
| 34 | 34 | 0.203 |
| 35 | 35 | 0.137 |
| 36 | 36 | 0.141 |
| 37 | 37 | 0.453 |
| 38 | 38 | 0.832 |
| 39 | 39 | 0.54 |
| 4 | 4 | 0.732 |
| 40 | 40 | 0.651 |
| 41 | 41 | 0.453 |
| 42 | 42 | 0.211 |
| 43 | 43 | 0.528 |
| 44 | 44 | 0.861 |
| 45 | 45 | 0.109 |
| 46 | 46 | 0.651 |
| 47 | 47 | 0.443 |
| 48 | 48 | 0.746 |
| 49 | 49 | 0.0929 |
| 5 | 5 | 0.731 |
| 50 | 50 | 0.459 |
| 51 | 51 | 0.931 |
| 52 | 52 | 0.79 |
| 53 | 53 | 0.19 |
| 54 | 54 | 0.885 |
| 55 | 55 | 0.959 |
| 56 | 56 | 0.825 |
| 57 | 57 | 0.583 |
| 58 | 58 | 0.196 |
| 59 | 59 | 0.28 |
| 6 | 6 | 0.663 |
| 60 | 60 | 0.552 |
| 61 | 61 | 0.226 |
| 62 | 62 | 0.249 |
| 63 | 63 | 0.908 |
| 64 | 64 | 0.749 |
| 65 | 65 | 0.644 |
| 66 | 66 | 0.17 |
| 67 | 67 | 0.567 |
| 68 | 68 | 0.811 |
| 69 | 69 | 0.684 |
| 7 | 7 | 0.772 |
| 70 | 70 | 0.0918 |
| 71 | 71 | 0.169 |
| 72 | 72 | 0.586 |
| 73 | 73 | 0.928 |
| 74 | 74 | 0.758 |
| 75 | 75 | 0.0215 |
| 76 | 76 | 0.0368 |
| 77 | 77 | 0.00714 |
| 78 | 78 | 0.582 |
| 79 | 79 | 0.598 |
| 8 | 8 | 0.588 |
| 80 | 80 | 0.244 |
| 81 | 81 | 0.741 |
| 82 | 82 | 0.449 |
| 83 | 83 | 0.901 |
| 84 | 84 | 0.0637 |
| 85 | 85 | 0.891 |
| 86 | 86 | 0.0808 |
| 87 | 87 | 0.449 |
| 88 | 88 | 0.897 |
| 89 | 89 | 0.00465 |
| 9 | 9 | 0.445 |
| 90 | 90 | 0.262 |
| 91 | 91 | 0.467 |
| 92 | 92 | 0.616 |
| 93 | 93 | 0.377 |
| 94 | 94 | 0.447 |
| 95 | 95 | 0.278 |
| 96 | 96 | 0.856 |
| 97 | 97 | 0.279 |
| 98 | 98 | 0.274 |
| 99 | 99 | 1.05599e-4 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11955
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000031 CD4-positive T cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000624 (CD4-positive, alpha-beta T cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000031 (CD4-positive T cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)
