FF:10203-103F5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005080 | ||
|accession_numbers=CAGE;DRX008750;DRR009622;DRZ001047;DRZ002432;DRZ012397;DRZ013782 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001723,UBERON:0000033,UBERON:0000479,UBERON:0001007,UBERON:0004121,UBERON:0004119,UBERON:0010314,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0001444,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000020,UBERON:0001032,UBERON:0010317,UBERON:0001555,UBERON:0000153,UBERON:0007811,UBERON:0000165,UBERON:0004456,UBERON:0001033 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010203 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr4:57547454..57547469,-!p1@HOPX!2.75!555.61!HOPX;;chr11:34642612..34642646,+!p1@EHF!2.30!198.34!EHF;;chr12:52437488..52437507,+!p2@NR4A1!2.28!188.11!NR4A1;;chr15:42749722..42749739,-!p2@ZFP106!2.22!285.43!ZFP106;;chr17:80797886..80797906,-!p1@ZNF750!2.15!139.77!ZNF750;;chr5:134369879..134369898,-!p2@PITX1!2.05!111.04!PITX1;;chr5:134369905..134369972,-!p1@PITX1!1.85!105.16!PITX1;;chr20:62680984..62680999,-!p1@SOX18!1.79!78.60!SOX18;;chr15:101069113..101069169,-!p1@CERS3!1.78!59.22!CERS3;;chr14:37131058..37131139,+!p1@PAX9!1.77!57.69!PAX9;;chr11:129245526..129245553,+!p1@BARX2!1.76!57.04!BARX2;;chr17:7493405..7493419,-!p1@SOX15!1.75!55.30!SOX15;;chr1:24645921..24645973,+!p2@GRHL3!1.70!49.64!GRHL3;;chr1:24645832..24645853,+!p1@GRHL3!1.69!47.46!GRHL3;;chr8:10588010..10588030,-!p1@SOX7!1.64!43.11!SOX7;;chr12:81101404..81101421,+!p1@MYF6!1.62!40.93!MYF6;;chr1:201979743..201979762,+!p1@ELF3!1.62!40.28!ELF3;;chr1:201979703..201979721,+!p2@ELF3!1.57!36.36!ELF3;;chr11:65554528..65554546,+!p1@OVOL1!1.55!34.62!OVOL1;;chr3:189507432..189507459,+!p1@TP63!1.54!33.31!TP63;;chr11:113930425..113930471,+!p1@ZBTB16!1.53!46.59!ZBTB16;;chr19:46801639..46801699,+!p1@HIF3A!1.51!31.35!HIF3A;;chr13:73633131..73633149,+!p1@KLF5!1.44!272.36!KLF5;;chr12:54785074..54785122,-!p2@ZNF385A!1.44!40.28!ZNF385A;;chr17:53342311..53342400,+!p1@HLF!1.44!30.04!HLF;;chr14:75746722..75746777,+!p2@FOS!1.40!30.48!FOS;;chr1:209979467..209979494,-!p1@IRF6!1.40!27.21!IRF6;;chr11:34642656..34642667,+!p2@EHF!1.40!23.95!EHF;;chr1:151804244..151804310,-!p1@RORC!1.39!23.51!RORC;;chr11:129245736..129245758,+!p2@BARX2!1.39!23.30!BARX2;;chr20:55204351..55204377,+!p1@TFAP2C!1.37!28.09!TFAP2C;;chr6:10415276..10415341,-!p2@TFAP2A!1.37!27.21!TFAP2A;;chr1:209979411..209979433,-!p2@IRF6!1.37!22.21!IRF6;;chr21:39870339..39870443,-!p1@ERG!1.35!21.55!ERG;;chr18:45663490..45663528,-!p2@ZBTB7C!1.35!21.34!ZBTB7C;;chr1:170632285..170632309,+!p1@PRRX1!1.34!23.51!PRRX1;;chr7:73038839..73038862,-!p1@MLXIPL!1.33!20.47!MLXIPL;;chr12:81101472..81101483,+!p2@MYF6!1.33!20.25!MYF6;;chr1:203055129..203055147,-!p1@MYOG!1.32!20.03!MYOG;;chr19:45971246..45971265,+!p1@FOSB!1.31!353.14!FOSB;;chr11:125034640..125034655,+!p1@PKNOX2!1.31!19.59!PKNOX2;;chr1:40105299..40105326,-!p1@HEYL!1.30!18.94!HEYL;;chr22:41763452..41763466,+!p2@TEF!1.29!18.72!TEF;;chr6:106534192..106534224,+!p1@PRDM1!1.28!49.86!PRDM1;;chr12:54785054..54785072,-!p4@ZNF385A!1.28!20.47!ZNF385A;;chr2:122042770..122042785,-!p1@TFCP2L1!1.27!17.64!TFCP2L1;;chr3:189349162..189349207,+!p2@TP63!1.26!17.20!TP63;;chr12:52445218..52445237,+!p1@NR4A1!1.24!200.30!NR4A1;;chr20:50179368..50179392,-!p2@NFATC2!1.24!21.12!NFATC2;;chrY:21906594..21906622,-!p1@KDM5D!1.24!16.33!KDM5D;;chr14:75745523..75745537,+!p1@FOS!1.23!1876.50!FOS;;chr9:110252035..110252057,-!p1@KLF4!1.22!243.84!KLF4;;chr4:111544219..111544240,-!p1@PITX2!1.22!15.46!PITX2;;chr7:15726243..15726293,-!p2@MEOX2!1.21!15.24!MEOX2;;chr14:61116183..61116208,-!p1@SIX1!1.20!56.61!SIX1;;chr7:77469439..77469459,+!p6@PHTF2!1.20!14.80!PHTF2;;chr8:25902876..25902936,-!p1@EBF2!1.20!14.80!EBF2;;chr16:79634624..79634642,-!p1@MAF!1.19!56.39!MAF;;chr12:10875658..10875708,-!p2@CSDA!1.18!32.00!CSDA;;chr2:10091815..10091864,+!p1@GRHL1!1.18!18.72!GRHL1;;chr12:10870927..10870966,-!p5@CSDA!1.17!13.93!CSDA;;chr22:19748231..19748317,+!p1@TBX1!1.17!13.72!TBX1;;chr8:55370487..55370503,+!p1@SOX17!1.17!13.72!SOX17;;chr2:70142232..70142251,+!p1@MXD1!1.16!75.77!MXD1;;chr17:26833339..26833378,+!p1@FOXN1!1.16!13.50!FOXN1;;chr4:57522598..57522664,-!p3@HOPX!1.15!13.28!HOPX;;chr5:71803177..71803255,-!p1@ZNF366!1.15!13.28!ZNF366;;chr6:34524093..34524135,-!p1@SPDEF!1.15!13.06!SPDEF;;chr11:65554563..65554576,+!p2@OVOL1!1.14!12.85!OVOL1;;chr20:39317868..39317884,-!p1@MAFB!1.13!148.05!MAFB;;chr1:216978721..216978728,-!p13@ESRRG!1.13!12.63!ESRRG;;chr7:15726296..15726315,-!p1@MEOX2!1.13!12.41!MEOX2;;chr17:80797863..80797874,-!p2@ZNF750!1.13!12.41!ZNF750;;chr6:1312325..1312340,+!p1@FOXQ1!1.12!19.81!FOXQ1;;chr6:106534230..106534254,+!p2@PRDM1!1.11!29.83!PRDM1;;chr9:102584159..102584174,+!p2@NR4A3!1.11!21.34!NR4A3;;chr8:102504651..102504683,+!p1@GRHL2!1.11!11.97!GRHL2;;chr17:48072574..48072597,-!p1@DLX3!1.11!11.76!DLX3;;chr10:64018918..64018936,+!p2@ZNF365!1.11!11.76!ZNF365;;chr1:170633262..170633285,+!p3@PRRX1!1.08!12.63!PRRX1;;chr11:12766597..12766618,+!p11@TEAD1!1.08!10.89!TEAD1;;chr3:111314186..111314204,-!p1@ZBED2!1.08!10.89!ZBED2;;chr9:100615499..100615519,+!p1@FOXE1!1.08!10.89!FOXE1;;chr1:170633348..170633399,+!p2@PRRX1!1.07!14.80!PRRX1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.07!10.67!PEG3;;chr3:189348969..189349018,+!p4@TP63!1.07!10.67!TP63;;chr19:33793430..33793447,-!p1@CEBPA!1.06!44.20!CEBPA;;chr12:10865870..10865888,-!p6@CSDA!1.06!14.37!CSDA;;chr15:83953397..83953425,-!p1@BNC1!1.06!12.19!BNC1;;chr3:181429704..181429722,+!p1@SOX2!1.06!10.45!SOX2;;chr2:238592039..238592054,+!p4@LRRFIP1!1.05!10.23!LRRFIP1;;chr4:57522674..57522699,-!p5@HOPX!1.05!10.23!HOPX;;chr1:6479968..6479986,-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| 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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000161;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000165;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000166;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001557;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001723;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0008814 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0006595,UBERON:0008814,UBERON:0010056,UBERON:0010316 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/tongue%252c%2520adult.CNhs12853.10203-103F5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/tongue%252c%2520adult.CNhs12853.10203-103F5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/tongue%252c%2520adult.CNhs12853.10203-103F5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/tongue%252c%2520adult.CNhs12853.10203-103F5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/tongue%252c%2520adult.CNhs12853.10203-103F5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10203-103F5 | |id=FF:10203-103F5 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010203 | ||
|is_obsolete= | |||
|library_id=CNhs12853 | |||
|library_id_phase_based=2:CNhs12853 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10203 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10203 | |||
|name=tongue, adult | |name=tongue, adult | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12853,LSID973,release012,COMPLETED | |profile_hcage=CNhs12853,LSID973,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number=R1234267-50 | |rna_catalog_number=R1234267-50 | ||
| Line 56: | Line 78: | ||
|rna_tube_id=103F5 | |rna_tube_id=103F5 | ||
|rna_weight_ug=50 | |rna_weight_ug=50 | ||
|sample_age= | |sample_age=28 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0005737;cytoplasm;9.81312495603912e-209!GO:0044424;intracellular part;4.95735114619533e-205!GO:0043226;organelle;9.7361985971351e-145!GO:0043229;intracellular organelle;2.66271079187369e-144!GO:0044444;cytoplasmic part;3.16768605717608e-135!GO:0043231;intracellular membrane-bound organelle;2.23751661985897e-110!GO:0043227;membrane-bound organelle;2.25229793079465e-110!GO:0044422;organelle part;1.35484811617449e-107!GO:0044446;intracellular organelle part;3.15912769943878e-106!GO:0005515;protein binding;1.71030872797508e-101!GO:0032991;macromolecular complex;2.1397944238944e-86!GO:0005739;mitochondrion;4.82948988045553e-66!GO:0030529;ribonucleoprotein complex;1.15098973804104e-65!GO:0044237;cellular metabolic process;2.04311200738704e-51!GO:0043233;organelle lumen;1.50852035445037e-49!GO:0031974;membrane-enclosed lumen;1.50852035445037e-49!GO:0003723;RNA binding;4.78684786048884e-49!GO:0044238;primary metabolic process;1.44349465455534e-48!GO:0043228;non-membrane-bound organelle;3.10791879425151e-48!GO:0043232;intracellular non-membrane-bound organelle;3.10791879425151e-48!GO:0044429;mitochondrial part;5.60701500482514e-47!GO:0043234;protein complex;6.85006238837693e-47!GO:0019538;protein metabolic process;2.59464968255971e-44!GO:0005840;ribosome;3.6241826487843e-44!GO:0043170;macromolecule metabolic process;5.09811530338312e-43!GO:0006412;translation;4.20662665378201e-42!GO:0016043;cellular component organization and biogenesis;7.88055343263298e-41!GO:0044428;nuclear part;1.76223289044214e-40!GO:0031967;organelle envelope;6.2522422315928e-40!GO:0005829;cytosol;9.4301851378682e-40!GO:0031975;envelope;1.23357945660827e-39!GO:0003735;structural constituent of ribosome;2.4899743767035e-39!GO:0044260;cellular macromolecule metabolic process;5.38139156061014e-39!GO:0044267;cellular protein metabolic process;2.76695649735601e-37!GO:0031090;organelle membrane;1.45549583551898e-36!GO:0033279;ribosomal subunit;8.76650000689364e-35!GO:0044249;cellular biosynthetic process;1.33037054326719e-33!GO:0009058;biosynthetic process;1.26019682407625e-32!GO:0005634;nucleus;2.1271255314757e-31!GO:0033036;macromolecule localization;3.76566695311927e-31!GO:0005740;mitochondrial envelope;5.71096281504916e-31!GO:0031966;mitochondrial membrane;4.36714420226044e-30!GO:0009059;macromolecule biosynthetic process;6.30898893696093e-30!GO:0015031;protein transport;6.36566249246123e-30!GO:0019866;organelle inner membrane;1.59262979903766e-29!GO:0008104;protein localization;6.03284115780731e-29!GO:0045184;establishment of protein localization;1.23801021724257e-28!GO:0005743;mitochondrial inner membrane;3.18782779171905e-28!GO:0065003;macromolecular complex assembly;4.87423451325513e-28!GO:0006396;RNA processing;1.17820164218395e-27!GO:0022607;cellular component assembly;3.30841262888585e-27!GO:0008380;RNA splicing;9.11336591621549e-27!GO:0016071;mRNA metabolic process;4.19694701303179e-26!GO:0031981;nuclear lumen;2.01420825444416e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.2673807090112e-24!GO:0006119;oxidative phosphorylation;3.68265047269246e-24!GO:0046907;intracellular transport;4.43108468516401e-24!GO:0006996;organelle organization and biogenesis;6.86754504085235e-23!GO:0008092;cytoskeletal protein binding;1.80339537996338e-22!GO:0006397;mRNA processing;1.90044017451861e-22!GO:0006886;intracellular protein transport;4.51586440851269e-22!GO:0044455;mitochondrial membrane part;1.41724028740898e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.60127114362832e-21!GO:0044445;cytosolic part;5.67773990107261e-21!GO:0031980;mitochondrial lumen;9.62827736353622e-21!GO:0005759;mitochondrial matrix;9.62827736353622e-21!GO:0005746;mitochondrial respiratory chain;1.58648882774577e-20!GO:0015935;small ribosomal subunit;4.24736681690363e-19!GO:0048770;pigment granule;1.13540677896954e-18!GO:0042470;melanosome;1.13540677896954e-18!GO:0005681;spliceosome;4.0850869051375e-18!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.12749299947037e-18!GO:0050136;NADH dehydrogenase (quinone) activity;1.14597921528549e-17!GO:0003954;NADH dehydrogenase activity;1.14597921528549e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.14597921528549e-17!GO:0008134;transcription factor binding;1.94596655515405e-17!GO:0015934;large ribosomal subunit;8.06010943987497e-17!GO:0010467;gene expression;1.01447366756195e-16!GO:0043283;biopolymer metabolic process;2.01559720788956e-16!GO:0005856;cytoskeleton;4.67010799620818e-16!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.23028950143241e-16!GO:0005783;endoplasmic reticulum;8.21596489613021e-16!GO:0030964;NADH dehydrogenase complex (quinone);1.08776022161273e-15!GO:0045271;respiratory chain complex I;1.08776022161273e-15!GO:0005747;mitochondrial respiratory chain complex I;1.08776022161273e-15!GO:0022618;protein-RNA complex assembly;1.43089124954764e-15!GO:0051641;cellular localization;2.17162853849506e-15!GO:0042775;organelle ATP synthesis coupled electron transport;2.17659200767761e-15!GO:0042773;ATP synthesis coupled electron transport;2.17659200767761e-15!GO:0051649;establishment of cellular localization;3.32773600252601e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.6247902226701e-15!GO:0005654;nucleoplasm;6.09053464941099e-15!GO:0015629;actin cytoskeleton;7.06188450451046e-15!GO:0044265;cellular macromolecule catabolic process;1.51815817954638e-14!GO:0008135;translation factor activity, nucleic acid binding;1.65533155771274e-14!GO:0051186;cofactor metabolic process;2.05590862619784e-14!GO:0044248;cellular catabolic process;2.22335773993406e-14!GO:0005761;mitochondrial ribosome;2.79561346110113e-14!GO:0000313;organellar ribosome;2.79561346110113e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;4.41469706457353e-14!GO:0006511;ubiquitin-dependent protein catabolic process;6.6420008024459e-14!GO:0019941;modification-dependent protein catabolic process;8.6872489986195e-14!GO:0043632;modification-dependent macromolecule catabolic process;8.6872489986195e-14!GO:0003779;actin binding;1.08293737085126e-13!GO:0000166;nucleotide binding;1.21270299926579e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.23609649653783e-13!GO:0044257;cellular protein catabolic process;1.35877170003842e-13!GO:0006605;protein targeting;2.47741430911923e-13!GO:0000502;proteasome complex (sensu Eukaryota);2.64513728145726e-13!GO:0006512;ubiquitin cycle;4.85185504098289e-13!GO:0048523;negative regulation of cellular process;4.93695728035952e-13!GO:0044451;nucleoplasm part;5.49124313634367e-13!GO:0006457;protein folding;5.49124313634367e-13!GO:0009055;electron carrier activity;6.83037412008011e-13!GO:0044449;contractile fiber part;1.64631700521001e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.6935475947588e-12!GO:0016817;hydrolase activity, acting on acid anhydrides;1.87479118250074e-12!GO:0016462;pyrophosphatase activity;2.22897450368303e-12!GO:0017111;nucleoside-triphosphatase activity;2.5633941903018e-12!GO:0043292;contractile fiber;3.1737717821198e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.84388214898114e-12!GO:0006732;coenzyme metabolic process;1.07690546060921e-11!GO:0048519;negative regulation of biological process;1.27695883148875e-11!GO:0006461;protein complex assembly;1.59946007191222e-11!GO:0012501;programmed cell death;1.79282391393655e-11!GO:0016874;ligase activity;1.91359128486385e-11!GO:0009057;macromolecule catabolic process;1.91576902499059e-11!GO:0030216;keratinocyte differentiation;2.06985332339945e-11!GO:0006915;apoptosis;2.15886630164386e-11!GO:0043285;biopolymer catabolic process;4.41397409262445e-11!GO:0016192;vesicle-mediated transport;5.29017433533163e-11!GO:0008307;structural constituent of muscle;5.82572272263468e-11!GO:0012505;endomembrane system;8.54750317786472e-11!GO:0006366;transcription from RNA polymerase II promoter;9.15759409471324e-11!GO:0003712;transcription cofactor activity;1.00402320930314e-10!GO:0003743;translation initiation factor activity;1.06668555443005e-10!GO:0030163;protein catabolic process;1.1562851520182e-10!GO:0005730;nucleolus;1.74874130754158e-10!GO:0008219;cell death;1.98186237132847e-10!GO:0016265;death;1.98186237132847e-10!GO:0043687;post-translational protein modification;2.43712714693008e-10!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.46518319101347e-10!GO:0045333;cellular respiration;2.48942600869017e-10!GO:0001533;cornified envelope;2.55637201281701e-10!GO:0006413;translational initiation;2.68804016349369e-10!GO:0043412;biopolymer modification;4.00657938907701e-10!GO:0015980;energy derivation by oxidation of organic compounds;4.60144081300375e-10!GO:0006446;regulation of translational initiation;4.91673116347156e-10!GO:0048193;Golgi vesicle transport;5.248567386651e-10!GO:0006091;generation of precursor metabolites and energy;7.71123674418196e-10!GO:0030016;myofibril;8.77788984824989e-10!GO:0030036;actin cytoskeleton organization and biogenesis;8.99727281363391e-10!GO:0009060;aerobic respiration;1.2232256710854e-09!GO:0005635;nuclear envelope;1.44553935844852e-09!GO:0006913;nucleocytoplasmic transport;1.80890260570866e-09!GO:0017076;purine nucleotide binding;1.87005226177392e-09!GO:0006464;protein modification process;1.96564807532727e-09!GO:0051082;unfolded protein binding;2.16055305035703e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.52326713219307e-09!GO:0051246;regulation of protein metabolic process;3.40991150375343e-09!GO:0030029;actin filament-based process;3.55651776860174e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;4.00027511305366e-09!GO:0000375;RNA splicing, via transesterification reactions;4.00027511305366e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.00027511305366e-09!GO:0044432;endoplasmic reticulum part;4.30183065048097e-09!GO:0051169;nuclear transport;4.89979346404528e-09!GO:0008565;protein transporter activity;6.45361910943444e-09!GO:0032553;ribonucleotide binding;7.29271195256393e-09!GO:0032555;purine ribonucleotide binding;7.29271195256393e-09!GO:0015078;hydrogen ion transmembrane transporter activity;8.76430388878813e-09!GO:0006259;DNA metabolic process;9.08146131607551e-09!GO:0016491;oxidoreductase activity;1.03326468788466e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.13894060451951e-08!GO:0019829;cation-transporting ATPase activity;1.16223285619275e-08!GO:0030017;sarcomere;1.18729803895299e-08!GO:0031965;nuclear membrane;1.18848959917908e-08!GO:0005794;Golgi apparatus;1.27734162003824e-08!GO:0006099;tricarboxylic acid cycle;1.33744866897084e-08!GO:0046356;acetyl-CoA catabolic process;1.33744866897084e-08!GO:0009056;catabolic process;1.41822499392501e-08!GO:0007010;cytoskeleton organization and biogenesis;1.44561855147779e-08!GO:0016564;transcription repressor activity;1.59407743839454e-08!GO:0017038;protein import;1.75688654876111e-08!GO:0007517;muscle development;2.24003335024342e-08!GO:0016604;nuclear body;2.28684548413884e-08!GO:0006084;acetyl-CoA metabolic process;3.49043486407284e-08!GO:0006163;purine nucleotide metabolic process;4.40033736910754e-08!GO:0015986;ATP synthesis coupled proton transport;4.64266564463236e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.64266564463236e-08!GO:0009109;coenzyme catabolic process;7.29187383900396e-08!GO:0005793;ER-Golgi intermediate compartment;7.34169307193359e-08!GO:0016469;proton-transporting two-sector ATPase complex;1.09916439628228e-07!GO:0009150;purine ribonucleotide metabolic process;1.18110186048638e-07!GO:0007049;cell cycle;1.23611582494691e-07!GO:0016607;nuclear speck;1.24948907430444e-07!GO:0009259;ribonucleotide metabolic process;1.40299581651102e-07!GO:0008639;small protein conjugating enzyme activity;1.57169738376666e-07!GO:0051187;cofactor catabolic process;1.61065619737684e-07!GO:0009892;negative regulation of metabolic process;2.08946156811947e-07!GO:0006793;phosphorus metabolic process;3.18123551552123e-07!GO:0006796;phosphate metabolic process;3.18123551552123e-07!GO:0004842;ubiquitin-protein ligase activity;3.18418912283824e-07!GO:0042802;identical protein binding;3.35196895727055e-07!GO:0031324;negative regulation of cellular metabolic process;3.6716272330683e-07!GO:0046034;ATP metabolic process;4.13822696275375e-07!GO:0009141;nucleoside triphosphate metabolic process;4.18941341900354e-07!GO:0031988;membrane-bound vesicle;4.79538384335182e-07!GO:0042254;ribosome biogenesis and assembly;5.37399812821392e-07!GO:0043069;negative regulation of programmed cell death;5.39380545203458e-07!GO:0031982;vesicle;5.4107831441377e-07!GO:0005768;endosome;5.81506268537545e-07!GO:0009199;ribonucleoside triphosphate metabolic process;6.10272062483288e-07!GO:0007398;ectoderm development;6.47946715956671e-07!GO:0043066;negative regulation of apoptosis;6.82353761661792e-07!GO:0019787;small conjugating protein ligase activity;6.82353761661792e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.82474081812307e-07!GO:0009144;purine nucleoside triphosphate metabolic process;6.82474081812307e-07!GO:0003924;GTPase activity;6.87147560155566e-07!GO:0006164;purine nucleotide biosynthetic process;7.20336127233726e-07!GO:0042981;regulation of apoptosis;7.40901063758487e-07!GO:0016023;cytoplasmic membrane-bound vesicle;7.80177879117116e-07!GO:0051188;cofactor biosynthetic process;7.95803983233504e-07!GO:0045259;proton-transporting ATP synthase complex;8.19185145584456e-07!GO:0030554;adenyl nucleotide binding;8.21452926867548e-07!GO:0006916;anti-apoptosis;9.51202871932145e-07!GO:0051170;nuclear import;1.24575514626229e-06!GO:0031410;cytoplasmic vesicle;1.24575514626229e-06!GO:0016481;negative regulation of transcription;1.25391428083448e-06!GO:0008544;epidermis development;1.26098588491524e-06!GO:0043067;regulation of programmed cell death;1.26098588491524e-06!GO:0016529;sarcoplasmic reticulum;1.43782056816867e-06!GO:0016528;sarcoplasm;1.43782056816867e-06!GO:0006979;response to oxidative stress;1.48825840106161e-06!GO:0031252;leading edge;1.70438820509512e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.71100701269373e-06!GO:0006606;protein import into nucleus;1.7894160389259e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.92201352784713e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.12299748108013e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.15035486359975e-06!GO:0032559;adenyl ribonucleotide binding;2.44575239116781e-06!GO:0016887;ATPase activity;2.48152759457953e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.48152759457953e-06!GO:0006754;ATP biosynthetic process;2.49660305321312e-06!GO:0006753;nucleoside phosphate metabolic process;2.49660305321312e-06!GO:0005524;ATP binding;2.67920797772703e-06!GO:0019899;enzyme binding;2.71978501511759e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.7382440651775e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.98823263091343e-06!GO:0009260;ribonucleotide biosynthetic process;3.14300034573393e-06!GO:0006950;response to stress;3.92169432937684e-06!GO:0005789;endoplasmic reticulum membrane;4.07676093388532e-06!GO:0044453;nuclear membrane part;4.18385395704187e-06!GO:0009142;nucleoside triphosphate biosynthetic process;4.37807932436202e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.37807932436202e-06!GO:0016310;phosphorylation;4.67370983168487e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.90407562138239e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.90407562138239e-06!GO:0003714;transcription corepressor activity;5.128998076183e-06!GO:0030532;small nuclear ribonucleoprotein complex;5.76003873282467e-06!GO:0005839;proteasome core complex (sensu Eukaryota);7.20752263260285e-06!GO:0016881;acid-amino acid ligase activity;8.7164199324866e-06!GO:0042623;ATPase activity, coupled;8.71797735605364e-06!GO:0014706;striated muscle development;9.29486611239184e-06!GO:0003713;transcription coactivator activity;9.54695373356795e-06!GO:0030120;vesicle coat;9.71190240897621e-06!GO:0030662;coated vesicle membrane;9.71190240897621e-06!GO:0051128;regulation of cellular component organization and biogenesis;9.81210610887573e-06!GO:0005912;adherens junction;1.04516073532649e-05!GO:0009108;coenzyme biosynthetic process;1.0885575178192e-05!GO:0007005;mitochondrion organization and biogenesis;1.29106542283096e-05!GO:0051789;response to protein stimulus;1.37369744713324e-05!GO:0006986;response to unfolded protein;1.37369744713324e-05!GO:0005762;mitochondrial large ribosomal subunit;1.47791567326249e-05!GO:0000315;organellar large ribosomal subunit;1.47791567326249e-05!GO:0009117;nucleotide metabolic process;1.61984095060295e-05!GO:0000074;regulation of progression through cell cycle;1.9508468727927e-05!GO:0051726;regulation of cell cycle;2.6897440507432e-05!GO:0030018;Z disc;2.86901097611867e-05!GO:0000245;spliceosome assembly;3.5772904368332e-05!GO:0048522;positive regulation of cellular process;3.80895829109093e-05!GO:0045786;negative regulation of progression through cell cycle;3.92677469837335e-05!GO:0031674;I band;4.1398631586557e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.21752945058627e-05!GO:0048475;coated membrane;4.51544479243814e-05!GO:0030117;membrane coat;4.51544479243814e-05!GO:0004298;threonine endopeptidase activity;4.56270593245384e-05!GO:0005643;nuclear pore;5.12894186172276e-05!GO:0005523;tropomyosin binding;5.26080431831065e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.32860716179038e-05!GO:0016044;membrane organization and biogenesis;6.42266255461873e-05!GO:0000314;organellar small ribosomal subunit;6.6052754582559e-05!GO:0005763;mitochondrial small ribosomal subunit;6.6052754582559e-05!GO:0032446;protein modification by small protein conjugation;6.8359438968855e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.90598417859229e-05!GO:0065002;intracellular protein transport across a membrane;7.29114732989806e-05!GO:0051427;hormone receptor binding;7.38260613932635e-05!GO:0022402;cell cycle process;7.56514129775837e-05!GO:0019843;rRNA binding;7.81957684441034e-05!GO:0016563;transcription activator activity;8.24764164944747e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.56985169276428e-05!GO:0004812;aminoacyl-tRNA ligase activity;8.56985169276428e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.56985169276428e-05!GO:0005525;GTP binding;8.79387779401454e-05!GO:0006974;response to DNA damage stimulus;8.82138993932007e-05!GO:0016567;protein ubiquitination;9.21564667013451e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;9.28371568464546e-05!GO:0048471;perinuclear region of cytoplasm;9.29817032924773e-05!GO:0006888;ER to Golgi vesicle-mediated transport;9.29817032924773e-05!GO:0006613;cotranslational protein targeting to membrane;0.000103022583632551!GO:0005770;late endosome;0.000109503759332225!GO:0005788;endoplasmic reticulum lumen;0.000110607275058967!GO:0046983;protein dimerization activity;0.000116492426184222!GO:0022890;inorganic cation transmembrane transporter activity;0.000116492426184222!GO:0019867;outer membrane;0.000123437412995488!GO:0005741;mitochondrial outer membrane;0.000128878996118446!GO:0031968;organelle outer membrane;0.000129233460263204!GO:0043566;structure-specific DNA binding;0.0001326960620446!GO:0006414;translational elongation;0.000136590035251772!GO:0003697;single-stranded DNA binding;0.000147586686942254!GO:0035257;nuclear hormone receptor binding;0.000152969108972065!GO:0043038;amino acid activation;0.000169499101304094!GO:0006418;tRNA aminoacylation for protein translation;0.000169499101304094!GO:0043039;tRNA aminoacylation;0.000169499101304094!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000177426549211638!GO:0043021;ribonucleoprotein binding;0.000192085589935007!GO:0005773;vacuole;0.000192085589935007!GO:0008361;regulation of cell size;0.00019645464466949!GO:0050662;coenzyme binding;0.000200258017244086!GO:0006323;DNA packaging;0.000215463756542095!GO:0045892;negative regulation of transcription, DNA-dependent;0.000218374458706162!GO:0007264;small GTPase mediated signal transduction;0.000224249411920322!GO:0016049;cell growth;0.000230203027493772!GO:0003676;nucleic acid binding;0.000231392629321758!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000233499162986157!GO:0016126;sterol biosynthetic process;0.000241275724843882!GO:0006752;group transfer coenzyme metabolic process;0.000246389884150677!GO:0007519;skeletal muscle development;0.000253016014403994!GO:0050789;regulation of biological process;0.000294744329826192!GO:0045941;positive regulation of transcription;0.000315320525358069!GO:0003012;muscle system process;0.000336136950247928!GO:0006936;muscle contraction;0.000336136950247928!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000338874923137716!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000357017989656662!GO:0050794;regulation of cellular process;0.000363870706763629!GO:0006364;rRNA processing;0.000380387569491976!GO:0016070;RNA metabolic process;0.00039438478324509!GO:0050657;nucleic acid transport;0.000405974495120107!GO:0051236;establishment of RNA localization;0.000405974495120107!GO:0050658;RNA transport;0.000405974495120107!GO:0030133;transport vesicle;0.000429262651102803!GO:0051287;NAD binding;0.000443396824014127!GO:0031032;actomyosin structure organization and biogenesis;0.000449429296649583!GO:0005865;striated muscle thin filament;0.000450472128106045!GO:0044440;endosomal part;0.000454001256020704!GO:0010008;endosome membrane;0.000454001256020704!GO:0005798;Golgi-associated vesicle;0.000456894284176053!GO:0005913;cell-cell adherens junction;0.000476712402665966!GO:0065004;protein-DNA complex assembly;0.000492267584576015!GO:0006941;striated muscle contraction;0.000495346731642792!GO:0000151;ubiquitin ligase complex;0.000509924585226931!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000522382392255934!GO:0006333;chromatin assembly or disassembly;0.00054074892375939!GO:0048518;positive regulation of biological process;0.00054330574816506!GO:0007243;protein kinase cascade;0.000544097556183574!GO:0016072;rRNA metabolic process;0.000547078934005278!GO:0006403;RNA localization;0.000548326540998365!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000555350830372739!GO:0045893;positive regulation of transcription, DNA-dependent;0.000592641157446398!GO:0001558;regulation of cell growth;0.000597988876933018!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000625401908814669!GO:0043284;biopolymer biosynthetic process;0.000705845863862853!GO:0032561;guanyl ribonucleotide binding;0.000731089589045731!GO:0019001;guanyl nucleotide binding;0.000731089589045731!GO:0015992;proton transport;0.000736967725613433!GO:0044430;cytoskeletal part;0.000740678789913691!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000766687008565013!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000766687008565013!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000766687008565013!GO:0003746;translation elongation factor activity;0.000817633204986718!GO:0005791;rough endoplasmic reticulum;0.000880491780277492!GO:0043623;cellular protein complex assembly;0.000900950260224397!GO:0006818;hydrogen transport;0.000978325848678525!GO:0009719;response to endogenous stimulus;0.000987275117075928!GO:0000323;lytic vacuole;0.00101302236865185!GO:0005764;lysosome;0.00101302236865185!GO:0016853;isomerase activity;0.00108413525635979!GO:0006399;tRNA metabolic process;0.00115621849724772!GO:0005667;transcription factor complex;0.00117092506089001!GO:0005905;coated pit;0.00128520575113529!GO:0003724;RNA helicase activity;0.00138473474638771!GO:0016197;endosome transport;0.00141285602969717!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00141360519211794!GO:0015002;heme-copper terminal oxidase activity;0.00141360519211794!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00141360519211794!GO:0004129;cytochrome-c oxidase activity;0.00141360519211794!GO:0007265;Ras protein signal transduction;0.00146283502160231!GO:0005769;early endosome;0.00146933466654366!GO:0033673;negative regulation of kinase activity;0.00147379052746744!GO:0006469;negative regulation of protein kinase activity;0.00147379052746744!GO:0008026;ATP-dependent helicase activity;0.00150373178235276!GO:0006118;electron transport;0.00163232588587104!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00171551924150683!GO:0001726;ruffle;0.00175928622061241!GO:0030027;lamellipodium;0.00186695181093514!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00187361099325731!GO:0051276;chromosome organization and biogenesis;0.0018891795614768!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00197672273316347!GO:0046930;pore complex;0.00197672273316347!GO:0000785;chromatin;0.00197672273316347!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0020248754534329!GO:0051920;peroxiredoxin activity;0.0020248754534329!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00206813608763115!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00206813608763115!GO:0006260;DNA replication;0.0021269578303394!GO:0009967;positive regulation of signal transduction;0.00214409588956255!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0021636536431435!GO:0006334;nucleosome assembly;0.00220773069346445!GO:0007266;Rho protein signal transduction;0.00224257510105523!GO:0016859;cis-trans isomerase activity;0.0022435512853969!GO:0051087;chaperone binding;0.00227361308500374!GO:0043681;protein import into mitochondrion;0.00240105842754653!GO:0042692;muscle cell differentiation;0.00253703122354221!GO:0004386;helicase activity;0.002568924661002!GO:0016787;hydrolase activity;0.0026336602392814!GO:0005200;structural constituent of cytoskeleton;0.00275558410121498!GO:0045445;myoblast differentiation;0.00275558410121498!GO:0006635;fatty acid beta-oxidation;0.00277501389057705!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00288071624352962!GO:0006695;cholesterol biosynthetic process;0.00290538255315106!GO:0051348;negative regulation of transferase activity;0.00292532285084965!GO:0033116;ER-Golgi intermediate compartment membrane;0.00298848017128354!GO:0005885;Arp2/3 protein complex;0.00298848017128354!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00307247002682734!GO:0015399;primary active transmembrane transporter activity;0.00307247002682734!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00318778817921197!GO:0033017;sarcoplasmic reticulum membrane;0.00322343977570978!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00325763279659824!GO:0033043;regulation of organelle organization and biogenesis;0.00325763279659824!GO:0045454;cell redox homeostasis;0.00353056635025948!GO:0008287;protein serine/threonine phosphatase complex;0.0035692766978145!GO:0035258;steroid hormone receptor binding;0.00360816071723249!GO:0005048;signal sequence binding;0.00368456218310675!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00373207987992922!GO:0030132;clathrin coat of coated pit;0.00374080005528214!GO:0031424;keratinization;0.0037439150033571!GO:0046314;phosphocreatine biosynthetic process;0.0038519549831767!GO:0006603;phosphocreatine metabolic process;0.0038519549831767!GO:0006693;prostaglandin metabolic process;0.00410660522497117!GO:0006692;prostanoid metabolic process;0.00410660522497117!GO:0051028;mRNA transport;0.00421390150486309!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.00421390150486309!GO:0048468;cell development;0.00434909559350623!GO:0031497;chromatin assembly;0.00442328975870382!GO:0044262;cellular carbohydrate metabolic process;0.00446632937454147!GO:0000278;mitotic cell cycle;0.00449415620934367!GO:0006897;endocytosis;0.00449415620934367!GO:0010324;membrane invagination;0.00449415620934367!GO:0051262;protein tetramerization;0.00474226699093928!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00491671282813977!GO:0006612;protein targeting to membrane;0.00499548658201764!GO:0009966;regulation of signal transduction;0.0052377909924719!GO:0048660;regulation of smooth muscle cell proliferation;0.00540060281189334!GO:0005977;glycogen metabolic process;0.00551891636010172!GO:0043488;regulation of mRNA stability;0.00556737779876362!GO:0043487;regulation of RNA stability;0.00556737779876362!GO:0019752;carboxylic acid metabolic process;0.00556982848415269!GO:0048659;smooth muscle cell proliferation;0.00568440033947018!GO:0015631;tubulin binding;0.00578996005630536!GO:0055001;muscle cell development;0.00594802345867058!GO:0030239;myofibril assembly;0.00594802345867058!GO:0055002;striated muscle cell development;0.00594802345867058!GO:0008139;nuclear localization sequence binding;0.00605684264868431!GO:0031072;heat shock protein binding;0.00621115737854627!GO:0006626;protein targeting to mitochondrion;0.00628530757145848!GO:0006082;organic acid metabolic process;0.00631935666693733!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.00650100519154194!GO:0051540;metal cluster binding;0.00656415916785796!GO:0051536;iron-sulfur cluster binding;0.00656415916785796!GO:0030055;cell-matrix junction;0.0067268343507036!GO:0016791;phosphoric monoester hydrolase activity;0.006892133755612!GO:0003690;double-stranded DNA binding;0.00693155769940116!GO:0005924;cell-substrate adherens junction;0.00695095690639914!GO:0040008;regulation of growth;0.00703359692737265!GO:0030518;steroid hormone receptor signaling pathway;0.00708145736068569!GO:0051146;striated muscle cell differentiation;0.00713027532849503!GO:0006281;DNA repair;0.00724615903100645!GO:0006839;mitochondrial transport;0.00726124885062592!GO:0051252;regulation of RNA metabolic process;0.00743386124177678!GO:0051289;protein homotetramerization;0.00750062566346694!GO:0051539;4 iron, 4 sulfur cluster binding;0.00763107407572129!GO:0006006;glucose metabolic process;0.00763631738308852!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00768188898755459!GO:0048500;signal recognition particle;0.00775227567154368!GO:0007006;mitochondrial membrane organization and biogenesis;0.007756294168869!GO:0005862;muscle thin filament tropomyosin;0.00787860649543557!GO:0048741;skeletal muscle fiber development;0.00787980128176846!GO:0048747;muscle fiber development;0.00787980128176846!GO:0030658;transport vesicle membrane;0.00815416442656253!GO:0008186;RNA-dependent ATPase activity;0.00816240516872495!GO:0008610;lipid biosynthetic process;0.00821985602960074!GO:0030118;clathrin coat;0.00824687167376502!GO:0008154;actin polymerization and/or depolymerization;0.00837842297544915!GO:0006633;fatty acid biosynthetic process;0.00841400098627043!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00867455985832608!GO:0006607;NLS-bearing substrate import into nucleus;0.00869349082185993!GO:0006007;glucose catabolic process;0.00918822720931396!GO:0030832;regulation of actin filament length;0.00967663468743748!GO:0030031;cell projection biogenesis;0.00971632105114002!GO:0006891;intra-Golgi vesicle-mediated transport;0.00982287011382101!GO:0032535;regulation of cellular component size;0.00994681750751754!GO:0042805;actinin binding;0.00997591567951154!GO:0008629;induction of apoptosis by intracellular signals;0.0100735985303386!GO:0003702;RNA polymerase II transcription factor activity;0.0104939350439864!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.010567279975212!GO:0008654;phospholipid biosynthetic process;0.0105738763488398!GO:0043492;ATPase activity, coupled to movement of substances;0.0107271352977536!GO:0016568;chromatin modification;0.0107414868623275!GO:0019395;fatty acid oxidation;0.0107414868623275!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0109397031753637!GO:0007566;embryo implantation;0.011561095773596!GO:0005694;chromosome;0.0120134014834581!GO:0000159;protein phosphatase type 2A complex;0.0120515029571548!GO:0008286;insulin receptor signaling pathway;0.0123278439879893!GO:0035035;histone acetyltransferase binding;0.0124511598368341!GO:0044431;Golgi apparatus part;0.0125561344203704!GO:0003729;mRNA binding;0.0129270950793326!GO:0006402;mRNA catabolic process;0.0129790138131221!GO:0005938;cell cortex;0.0130177734292023!GO:0004721;phosphoprotein phosphatase activity;0.0131290633045503!GO:0008250;oligosaccharyl transferase complex;0.0131290633045503!GO:0048487;beta-tubulin binding;0.0131830217587155!GO:0001666;response to hypoxia;0.0132531783604136!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0133525304081733!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0133540078654949!GO:0009893;positive regulation of metabolic process;0.0136105350800628!GO:0030867;rough endoplasmic reticulum membrane;0.0136980601106544!GO:0051101;regulation of DNA binding;0.0139343471957!GO:0006073;glucan metabolic process;0.0139533964605931!GO:0005813;centrosome;0.0139672681257172!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0139672681257172!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0142878264587849!GO:0015630;microtubule cytoskeleton;0.0143313622229493!GO:0005626;insoluble fraction;0.0144121685618938!GO:0048037;cofactor binding;0.0144121685618938!GO:0018149;peptide cross-linking;0.0144121685618938!GO:0045792;negative regulation of cell size;0.0144948514206249!GO:0051049;regulation of transport;0.0147106903236899!GO:0009165;nucleotide biosynthetic process;0.0152336266404942!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0152336266404942!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0153046136381529!GO:0045047;protein targeting to ER;0.0153046136381529!GO:0009913;epidermal cell differentiation;0.0153083548081238!GO:0043022;ribosome binding;0.0154940412815869!GO:0008601;protein phosphatase type 2A regulator activity;0.0158766237260536!GO:0007050;cell cycle arrest;0.015913414976462!GO:0051168;nuclear export;0.015913414976462!GO:0030674;protein binding, bridging;0.0160325804424084!GO:0030308;negative regulation of cell growth;0.0168049658841382!GO:0016408;C-acyltransferase activity;0.0168487760668322!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0168487760668322!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0169062362263183!GO:0019208;phosphatase regulator activity;0.0171606017036334!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0172630875838739!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0182362956832815!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0184459579796298!GO:0030521;androgen receptor signaling pathway;0.0184777587468684!GO:0001725;stress fiber;0.0185607256912013!GO:0032432;actin filament bundle;0.0185607256912013!GO:0030663;COPI coated vesicle membrane;0.0185931256811957!GO:0030126;COPI vesicle coat;0.0185931256811957!GO:0004004;ATP-dependent RNA helicase activity;0.0188143415854034!GO:0005869;dynactin complex;0.0190694994112251!GO:0006417;regulation of translation;0.0191435911064368!GO:0017166;vinculin binding;0.0191435911064368!GO:0015036;disulfide oxidoreductase activity;0.0191435911064368!GO:0008312;7S RNA binding;0.0191435911064368!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0191606934459242!GO:0019318;hexose metabolic process;0.0197225378716317!GO:0031589;cell-substrate adhesion;0.0200444769169902!GO:0065007;biological regulation;0.0201537265962069!GO:0030280;structural constituent of epidermis;0.020278929369629!GO:0004576;oligosaccharyl transferase activity;0.0203198784338393!GO:0019902;phosphatase binding;0.0203198784338393!GO:0043034;costamere;0.0203844580379396!GO:0001516;prostaglandin biosynthetic process;0.0212794731776521!GO:0046457;prostanoid biosynthetic process;0.0212794731776521!GO:0005684;U2-dependent spliceosome;0.0219602314554273!GO:0006733;oxidoreduction coenzyme metabolic process;0.0228500774828702!GO:0004448;isocitrate dehydrogenase activity;0.023061599879741!GO:0046164;alcohol catabolic process;0.0232724099603837!GO:0019904;protein domain specific binding;0.0233008217389287!GO:0030880;RNA polymerase complex;0.0234161794328008!GO:0065009;regulation of a molecular function;0.0236685401118229!GO:0006631;fatty acid metabolic process;0.0239563980973009!GO:0007009;plasma membrane organization and biogenesis;0.0242220459229216!GO:0005916;fascia adherens;0.0244095025782056!GO:0051259;protein oligomerization;0.0244980950831109!GO:0055092;sterol homeostasis;0.0245561041985589!GO:0042632;cholesterol homeostasis;0.0245561041985589!GO:0030134;ER to Golgi transport vesicle;0.0246851334220165!GO:0033018;sarcoplasmic reticulum lumen;0.0247281247012003!GO:0046848;hydroxyapatite binding;0.0249136613827158!GO:0006892;post-Golgi vesicle-mediated transport;0.0251788860540647!GO:0048154;S100 beta binding;0.0252606306616447!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0253583377876716!GO:0030660;Golgi-associated vesicle membrane;0.0255956522599531!GO:0008283;cell proliferation;0.025674966842589!GO:0044427;chromosomal part;0.0262505146981119!GO:0050811;GABA receptor binding;0.0263766641324675!GO:0008180;signalosome;0.0275127828313678!GO:0017022;myosin binding;0.0276048940687741!GO:0031326;regulation of cellular biosynthetic process;0.0277462691689113!GO:0007160;cell-matrix adhesion;0.0284967374707358!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0285004621473131!GO:0010257;NADH dehydrogenase complex assembly;0.0285004621473131!GO:0033108;mitochondrial respiratory chain complex assembly;0.0285004621473131!GO:0030127;COPII vesicle coat;0.0285004621473131!GO:0012507;ER to Golgi transport vesicle membrane;0.0285004621473131!GO:0031625;ubiquitin protein ligase binding;0.0288158980817565!GO:0009116;nucleoside metabolic process;0.0288741742050552!GO:0005996;monosaccharide metabolic process;0.0309602571602735!GO:0006942;regulation of striated muscle contraction;0.0309602571602735!GO:0051098;regulation of binding;0.0311507466420789!GO:0001944;vasculature development;0.0311963656014259!GO:0043086;negative regulation of catalytic activity;0.0314212670445651!GO:0006740;NADPH regeneration;0.0315668703439119!GO:0006098;pentose-phosphate shunt;0.0315668703439119!GO:0006376;mRNA splice site selection;0.0315712949402673!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0315712949402673!GO:0016363;nuclear matrix;0.0316224410720739!GO:0004111;creatine kinase activity;0.0317360632967603!GO:0001568;blood vessel development;0.0317706542152931!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0324167477492553!GO:0005832;chaperonin-containing T-complex;0.0324709364026281!GO:0008017;microtubule binding;0.0326611762927969!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0330979532153519!GO:0005790;smooth endoplasmic reticulum;0.0331562538957908!GO:0031901;early endosome membrane;0.033306454710377!GO:0045113;regulation of integrin biosynthetic process;0.0335948985241614!GO:0045112;integrin biosynthetic process;0.0335948985241614!GO:0003711;transcription elongation regulator activity;0.0341201448404701!GO:0042803;protein homodimerization activity;0.0345647552083026!GO:0045947;negative regulation of translational initiation;0.0345647552083026!GO:0004722;protein serine/threonine phosphatase activity;0.0346079393693385!GO:0043065;positive regulation of apoptosis;0.0352554613180182!GO:0005083;small GTPase regulator activity;0.0353727533326865!GO:0019888;protein phosphatase regulator activity;0.0354234453933832!GO:0051393;alpha-actinin binding;0.0354234453933832!GO:0030522;intracellular receptor-mediated signaling pathway;0.0354234453933832!GO:0048730;epidermis morphogenesis;0.0355059780608915!GO:0030041;actin filament polymerization;0.0360628808370614!GO:0046394;carboxylic acid biosynthetic process;0.0365094436615355!GO:0016053;organic acid biosynthetic process;0.0365094436615355!GO:0050681;androgen receptor binding;0.0368565103388084!GO:0016584;nucleosome positioning;0.0378338985900939!GO:0032787;monocarboxylic acid metabolic process;0.0389310243209025!GO:0005815;microtubule organizing center;0.03980473288609!GO:0030125;clathrin vesicle coat;0.039887208526028!GO:0030665;clathrin coated vesicle membrane;0.039887208526028!GO:0045098;type III intermediate filament;0.0399974427640879!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0404803930297142!GO:0000428;DNA-directed RNA polymerase complex;0.0404803930297142!GO:0030137;COPI-coated vesicle;0.0404976911761003!GO:0051261;protein depolymerization;0.0405216306162879!GO:0031902;late endosome membrane;0.0405216306162879!GO:0006354;RNA elongation;0.0405216306162879!GO:0030100;regulation of endocytosis;0.0407898932354657!GO:0016779;nucleotidyltransferase activity;0.0410513557570977!GO:0008426;protein kinase C inhibitor activity;0.0421981600464398!GO:0005859;muscle myosin complex;0.0427501378586401!GO:0007019;microtubule depolymerization;0.0427599712745521!GO:0030140;trans-Golgi network transport vesicle;0.0430470242973167!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0437278413284768!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0440519320248368!GO:0007242;intracellular signaling cascade;0.0440519320248368!GO:0051260;protein homooligomerization;0.0445112351198446!GO:0005925;focal adhesion;0.0445112351198446!GO:0016311;dephosphorylation;0.044991161416522!GO:0031406;carboxylic acid binding;0.0451255883543643!GO:0046365;monosaccharide catabolic process;0.0452751162745406!GO:0046822;regulation of nucleocytoplasmic transport;0.0452751162745406!GO:0000059;protein import into nucleus, docking;0.0454732319658069!GO:0016272;prefoldin complex;0.0455765888705212!GO:0004860;protein kinase inhibitor activity;0.045594362341044!GO:0043068;positive regulation of programmed cell death;0.0456181217722162!GO:0008147;structural constituent of bone;0.0461297703146414!GO:0051235;maintenance of localization;0.0469974570154655!GO:0006937;regulation of muscle contraction;0.0470371041238664!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0475855940277191!GO:0006401;RNA catabolic process;0.0481216318281299!GO:0006081;aldehyde metabolic process;0.0493284523818434!GO:0006112;energy reserve metabolic process;0.0494132959593719!GO:0005758;mitochondrial intermembrane space;0.0499229590711792!GO:0006213;pyrimidine nucleoside metabolic process;0.0499229590711792 | |||
|sample_id=10203 | |sample_id=10203 | ||
|sample_note= | |sample_note= | ||
|sample_sex= | |sample_sex=M | ||
|sample_species=Human (Homo sapiens) | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=MEF2{A,B,C,D}:5.76166372529;NR1H4:4.55319736315;TBP:4.35806904183;TFAP4:3.55847783036;TBX4,5:3.49943438861;ESRRA:3.34392883718;NR5A1,2:3.31978574059;NFE2L1:3.10458106306;MYOD1:2.86536697039;TFCP2:2.37839726372;ESR1:2.37442431435;FOXQ1:2.3342959077;SNAI1..3:2.33164926265;GLI1..3:2.19412039019;TFAP2{A,C}:2.14210889171;AR:2.06636560327;SPZ1:2.0479026343;FOXL1:1.94748593079;TAL1_TCF{3,4,12}:1.89675719652;TGIF1:1.89561750102;ZIC1..3:1.87149299453;NKX3-2:1.86879163517;NR6A1:1.85106365847;HAND1,2:1.83769858579;KLF4:1.82314706541;GATA4:1.79183704547;HOX{A4,D4}:1.78653716481;SRF:1.7735561062;ZEB1:1.73630924101;HMX1:1.68523413438;ZNF148:1.67187801544;ALX1:1.66810631704;SMAD1..7,9:1.63290018709;NFIX:1.63016248895;IKZF2:1.62510169363;PPARG:1.62030624919;UFEwm:1.61945828271;PAX1,9:1.5903022678;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.56601646163;MAFB:1.50703344021;PDX1:1.49123341962;SOX5:1.48555809525;TLX2:1.47807195908;RXRA_VDR{dimer}:1.46454523447;LMO2:1.44363588563;IKZF1:1.42147024893;ZNF423:1.41763412044;HSF1,2:1.41442266409;MYFfamily:1.35191409204;NHLH1,2:1.3231301068;RBPJ:1.28354679588;MTF1:1.27318260367;ZNF384:1.2713492049;TP53:1.23626500701;MYBL2:1.21211957586;TLX1..3_NFIC{dimer}:1.17851619088;GCM1,2:1.17753413697;POU3F1..4:1.09876263388;GTF2A1,2:1.08196852973;NKX2-2,8:1.0796209597;ALX4:1.0630506484;IRF7:1.01666916169;FOXM1:1.0129842747;RXR{A,B,G}:1.00896469645;MAZ:1.0081587854;FOXO1,3,4:0.920647474789;RREB1:0.911596331601;NFATC1..3:0.90735057599;SP1:0.90104762396;T:0.873644931488;YY1:0.832611203916;CUX2:0.824668747007;ZBTB6:0.823358053167;NKX6-1,2:0.782074646385;ATF2:0.755007103673;PAX5:0.746131452879;PATZ1:0.723130061662;PAX6:0.716831757078;TEAD1:0.701201652145;NKX2-1,4:0.665968722336;NR3C1:0.626645307383;EP300:0.599469631019;CDC5L:0.591978983092;STAT5{A,B}:0.529033366665;GTF2I:0.515862115971;NKX2-3_NKX2-5:0.507412397139;ARID5B:0.479545234299;HIC1:0.467664249996;REST:0.449392581959;ZNF238:0.438978099257;MED-1{core}:0.425943998644;XCPE1{core}:0.364598207199;BPTF:0.341682564556;JUN:0.335888909954;XBP1:0.335815778454;NANOG:0.317523067248;EVI1:0.267735107738;EBF1:0.249817980459;FOX{F1,F2,J1}:0.20326040258;TEF:0.184413942991;HES1:0.177025278524;SOX{8,9,10}:0.117939282193;POU2F1..3:0.116264352839;HNF4A_NR2F1,2:0.111449646382;POU1F1:0.108582502071;MZF1:0.0804980484339;POU6F1:0.071351447118;FOSL2:0.0702453297874;TFAP2B:0.0649210445475;EGR1..3:0.0580624513596;LEF1_TCF7_TCF7L1,2:0.0525502161452;POU5F1:0.0232172798283;RFX2..5_RFXANK_RFXAP:0.00418928985973;FOX{D1,D2}:-0.0155596278601;FOXN1:-0.0194852172086;ATF4:-0.0358082177221;ETS1,2:-0.0604802882267;ZBTB16:-0.0646047528116;IRF1,2:-0.0940119950219;SPI1:-0.11025308385;MTE{core}:-0.130358039544;FOS_FOS{B,L1}_JUN{B,D}:-0.153615026937;ATF6:-0.156066664673;STAT2,4,6:-0.172289063451;NFE2:-0.17388827202;PBX1:-0.192935279783;CDX1,2,4:-0.202920646045;bHLH_family:-0.224787761925;PITX1..3:-0.229850509076;GFI1B:-0.232903866193;GFI1:-0.236133990856;NFIL3:-0.254849228771;ZFP161:-0.256457229596;SREBF1,2:-0.256863823533;ZNF143:-0.275520080845;CEBPA,B_DDIT3:-0.278785973735;ATF5_CREB3:-0.312035983126;TOPORS:-0.312240074532;NFE2L2:-0.330762719663;NANOG{mouse}:-0.370335141634;ELF1,2,4:-0.373826485243;SPIB:-0.378312581759;E2F1..5:-0.383519793424;PAX2:-0.387872313606;STAT1,3:-0.39750762496;LHX3,4:-0.41161179457;NFKB1_REL_RELA:-0.428181695093;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.437043702385;RORA:-0.446943154189;ONECUT1,2:-0.464026485806;DMAP1_NCOR{1,2}_SMARC:-0.46666395732;CRX:-0.496449098623;NKX3-1:-0.497736315171;BREu{core}:-0.505185868185;PRDM1:-0.505781697866;BACH2:-0.506783524237;HLF:-0.515909995539;FOXP3:-0.527975323636;GZF1:-0.534891724923;NFY{A,B,C}:-0.588217551168;PAX3,7:-0.628666736136;CREB1:-0.63169659804;FOXA2:-0.715465972366;EN1,2:-0.73984337805;SOX17:-0.741569094185;SOX2:-0.756860760188;HNF1A:-0.781609340077;FOXP1:-0.871556552192;NRF1:-0.901930618069;RUNX1..3:-0.960078780889;PAX4:-0.99475562611;RFX1:-1.01153776882;ADNP_IRX_SIX_ZHX:-1.10397345353;HOX{A6,A7,B6,B7}:-1.12809687204;HOX{A5,B5}:-1.18265806625;HBP1_HMGB_SSRP1_UBTF:-1.19082378514;GATA6:-1.20331484162;AIRE:-1.24291248506;OCT4_SOX2{dimer}:-1.28348318205;TFDP1:-1.29716182156;VSX1,2:-1.38169549651;MYB:-1.42523771202;FOX{I1,J2}:-1.51573014038;AHR_ARNT_ARNT2:-1.56154788168;ELK1,4_GABP{A,B1}:-1.59986626686;HOXA9_MEIS1:-1.6582585443;FOXD3:-1.7129418304;DBP:-2.0275991471;HIF1A:-2.05898322341;HMGA1,2:-2.11937840155;PRRX1,2:-2.46573650674;PAX8:-2.82964448443 | |top_motifs=MEF2{A,B,C,D}:5.76166372529;NR1H4:4.55319736315;TBP:4.35806904183;TFAP4:3.55847783036;TBX4,5:3.49943438861;ESRRA:3.34392883718;NR5A1,2:3.31978574059;NFE2L1:3.10458106306;MYOD1:2.86536697039;TFCP2:2.37839726372;ESR1:2.37442431435;FOXQ1:2.3342959077;SNAI1..3:2.33164926265;GLI1..3:2.19412039019;TFAP2{A,C}:2.14210889171;AR:2.06636560327;SPZ1:2.0479026343;FOXL1:1.94748593079;TAL1_TCF{3,4,12}:1.89675719652;TGIF1:1.89561750102;ZIC1..3:1.87149299453;NKX3-2:1.86879163517;NR6A1:1.85106365847;HAND1,2:1.83769858579;KLF4:1.82314706541;GATA4:1.79183704547;HOX{A4,D4}:1.78653716481;SRF:1.7735561062;ZEB1:1.73630924101;HMX1:1.68523413438;ZNF148:1.67187801544;ALX1:1.66810631704;SMAD1..7,9:1.63290018709;NFIX:1.63016248895;IKZF2:1.62510169363;PPARG:1.62030624919;UFEwm:1.61945828271;PAX1,9:1.5903022678;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.56601646163;MAFB:1.50703344021;PDX1:1.49123341962;SOX5:1.48555809525;TLX2:1.47807195908;RXRA_VDR{dimer}:1.46454523447;LMO2:1.44363588563;IKZF1:1.42147024893;ZNF423:1.41763412044;HSF1,2:1.41442266409;MYFfamily:1.35191409204;NHLH1,2:1.3231301068;RBPJ:1.28354679588;MTF1:1.27318260367;ZNF384:1.2713492049;TP53:1.23626500701;MYBL2:1.21211957586;TLX1..3_NFIC{dimer}:1.17851619088;GCM1,2:1.17753413697;POU3F1..4:1.09876263388;GTF2A1,2:1.08196852973;NKX2-2,8:1.0796209597;ALX4:1.0630506484;IRF7:1.01666916169;FOXM1:1.0129842747;RXR{A,B,G}:1.00896469645;MAZ:1.0081587854;FOXO1,3,4:0.920647474789;RREB1:0.911596331601;NFATC1..3:0.90735057599;SP1:0.90104762396;T:0.873644931488;YY1:0.832611203916;CUX2:0.824668747007;ZBTB6:0.823358053167;NKX6-1,2:0.782074646385;ATF2:0.755007103673;PAX5:0.746131452879;PATZ1:0.723130061662;PAX6:0.716831757078;TEAD1:0.701201652145;NKX2-1,4:0.665968722336;NR3C1:0.626645307383;EP300:0.599469631019;CDC5L:0.591978983092;STAT5{A,B}:0.529033366665;GTF2I:0.515862115971;NKX2-3_NKX2-5:0.507412397139;ARID5B:0.479545234299;HIC1:0.467664249996;REST:0.449392581959;ZNF238:0.438978099257;MED-1{core}:0.425943998644;XCPE1{core}:0.364598207199;BPTF:0.341682564556;JUN:0.335888909954;XBP1:0.335815778454;NANOG:0.317523067248;EVI1:0.267735107738;EBF1:0.249817980459;FOX{F1,F2,J1}:0.20326040258;TEF:0.184413942991;HES1:0.177025278524;SOX{8,9,10}:0.117939282193;POU2F1..3:0.116264352839;HNF4A_NR2F1,2:0.111449646382;POU1F1:0.108582502071;MZF1:0.0804980484339;POU6F1:0.071351447118;FOSL2:0.0702453297874;TFAP2B:0.0649210445475;EGR1..3:0.0580624513596;LEF1_TCF7_TCF7L1,2:0.0525502161452;POU5F1:0.0232172798283;RFX2..5_RFXANK_RFXAP:0.00418928985973;FOX{D1,D2}:-0.0155596278601;FOXN1:-0.0194852172086;ATF4:-0.0358082177221;ETS1,2:-0.0604802882267;ZBTB16:-0.0646047528116;IRF1,2:-0.0940119950219;SPI1:-0.11025308385;MTE{core}:-0.130358039544;FOS_FOS{B,L1}_JUN{B,D}:-0.153615026937;ATF6:-0.156066664673;STAT2,4,6:-0.172289063451;NFE2:-0.17388827202;PBX1:-0.192935279783;CDX1,2,4:-0.202920646045;bHLH_family:-0.224787761925;PITX1..3:-0.229850509076;GFI1B:-0.232903866193;GFI1:-0.236133990856;NFIL3:-0.254849228771;ZFP161:-0.256457229596;SREBF1,2:-0.256863823533;ZNF143:-0.275520080845;CEBPA,B_DDIT3:-0.278785973735;ATF5_CREB3:-0.312035983126;TOPORS:-0.312240074532;NFE2L2:-0.330762719663;NANOG{mouse}:-0.370335141634;ELF1,2,4:-0.373826485243;SPIB:-0.378312581759;E2F1..5:-0.383519793424;PAX2:-0.387872313606;STAT1,3:-0.39750762496;LHX3,4:-0.41161179457;NFKB1_REL_RELA:-0.428181695093;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.437043702385;RORA:-0.446943154189;ONECUT1,2:-0.464026485806;DMAP1_NCOR{1,2}_SMARC:-0.46666395732;CRX:-0.496449098623;NKX3-1:-0.497736315171;BREu{core}:-0.505185868185;PRDM1:-0.505781697866;BACH2:-0.506783524237;HLF:-0.515909995539;FOXP3:-0.527975323636;GZF1:-0.534891724923;NFY{A,B,C}:-0.588217551168;PAX3,7:-0.628666736136;CREB1:-0.63169659804;FOXA2:-0.715465972366;EN1,2:-0.73984337805;SOX17:-0.741569094185;SOX2:-0.756860760188;HNF1A:-0.781609340077;FOXP1:-0.871556552192;NRF1:-0.901930618069;RUNX1..3:-0.960078780889;PAX4:-0.99475562611;RFX1:-1.01153776882;ADNP_IRX_SIX_ZHX:-1.10397345353;HOX{A6,A7,B6,B7}:-1.12809687204;HOX{A5,B5}:-1.18265806625;HBP1_HMGB_SSRP1_UBTF:-1.19082378514;GATA6:-1.20331484162;AIRE:-1.24291248506;OCT4_SOX2{dimer}:-1.28348318205;TFDP1:-1.29716182156;VSX1,2:-1.38169549651;MYB:-1.42523771202;FOX{I1,J2}:-1.51573014038;AHR_ARNT_ARNT2:-1.56154788168;ELK1,4_GABP{A,B1}:-1.59986626686;HOXA9_MEIS1:-1.6582585443;FOXD3:-1.7129418304;DBP:-2.0275991471;HIF1A:-2.05898322341;HMGA1,2:-2.11937840155;PRRX1,2:-2.46573650674;PAX8:-2.82964448443 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10203-103F5;search_select_hide=table117:FF:10203-103F5 | |||
}} | }} | ||
Latest revision as of 13:56, 3 June 2020
| Name: | tongue, adult |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12853 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12853
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12853
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.598 |
| 10 | 10 | 0.409 |
| 100 | 100 | 0.421 |
| 101 | 101 | 0.943 |
| 102 | 102 | 0.521 |
| 103 | 103 | 0.944 |
| 104 | 104 | 0.686 |
| 105 | 105 | 0.716 |
| 106 | 106 | 0.0603 |
| 107 | 107 | 0.028 |
| 108 | 108 | 0.14 |
| 109 | 109 | 0.775 |
| 11 | 11 | 0.68 |
| 110 | 110 | 0.963 |
| 111 | 111 | 0.528 |
| 112 | 112 | 0.032 |
| 113 | 113 | 0.992 |
| 114 | 114 | 0.862 |
| 115 | 115 | 0.00276 |
| 116 | 116 | 0.206 |
| 117 | 117 | 0.321 |
| 118 | 118 | 0.143 |
| 119 | 119 | 0.169 |
| 12 | 12 | 0.697 |
| 120 | 120 | 0.528 |
| 121 | 121 | 0.578 |
| 122 | 122 | 0.293 |
| 123 | 123 | 0.0258 |
| 124 | 124 | 0.107 |
| 125 | 125 | 0.738 |
| 126 | 126 | 0.357 |
| 127 | 127 | 0.465 |
| 128 | 128 | 0.179 |
| 129 | 129 | 0.858 |
| 13 | 13 | 0.773 |
| 130 | 130 | 0.497 |
| 131 | 131 | 0.505 |
| 132 | 132 | 0.0962 |
| 133 | 133 | 0.00976 |
| 134 | 134 | 0.0629 |
| 135 | 135 | 0.0197 |
| 136 | 136 | 0.835 |
| 137 | 137 | 0.19 |
| 138 | 138 | 0.908 |
| 139 | 139 | 0.155 |
| 14 | 14 | 0.694 |
| 140 | 140 | 0.616 |
| 141 | 141 | 0.48 |
| 142 | 142 | 0.775 |
| 143 | 143 | 0.0714 |
| 144 | 144 | 0.715 |
| 145 | 145 | 0.779 |
| 146 | 146 | 0.483 |
| 147 | 147 | 0.00772 |
| 148 | 148 | 0.325 |
| 149 | 149 | 0.0156 |
| 15 | 15 | 0.552 |
| 150 | 150 | 0.568 |
| 151 | 151 | 0.382 |
| 152 | 152 | 0.084 |
| 153 | 153 | 0.249 |
| 154 | 154 | 0.707 |
| 155 | 155 | 0.473 |
| 156 | 156 | 0.0956 |
| 157 | 157 | 0.917 |
| 158 | 158 | 0.0919 |
| 159 | 159 | 0.507 |
| 16 | 16 | 0.101 |
| 160 | 160 | 0.303 |
| 161 | 161 | 0.663 |
| 162 | 162 | 0.794 |
| 163 | 163 | 0.301 |
| 164 | 164 | 0.282 |
| 165 | 165 | 0.00929 |
| 166 | 166 | 0.13 |
| 167 | 167 | 0.208 |
| 168 | 168 | 0.386 |
| 169 | 169 | 0.0108 |
| 17 | 17 | 0.418 |
| 18 | 18 | 0.832 |
| 19 | 19 | 0.067 |
| 2 | 2 | 0.0108 |
| 20 | 20 | 0.0166 |
| 21 | 21 | 0.115 |
| 22 | 22 | 0.105 |
| 23 | 23 | 0.288 |
| 24 | 24 | 0.613 |
| 25 | 25 | 0.683 |
| 26 | 26 | 0.933 |
| 27 | 27 | 0.388 |
| 28 | 28 | 0.941 |
| 29 | 29 | 0.374 |
| 3 | 3 | 0.949 |
| 30 | 30 | 0.00353 |
| 31 | 31 | 0.554 |
| 32 | 32 | 0.0864 |
| 33 | 33 | 0.882 |
| 34 | 34 | 0.582 |
| 35 | 35 | 0.872 |
| 36 | 36 | 0.0166 |
| 37 | 37 | 0.38 |
| 38 | 38 | 0.634 |
| 39 | 39 | 0.177 |
| 4 | 4 | 0.666 |
| 40 | 40 | 0.461 |
| 41 | 41 | 0.524 |
| 42 | 42 | 0.467 |
| 43 | 43 | 0.951 |
| 44 | 44 | 4.3413e-4 |
| 45 | 45 | 0.0485 |
| 46 | 46 | 0.596 |
| 47 | 47 | 0.977 |
| 48 | 48 | 0.935 |
| 49 | 49 | 0.792 |
| 5 | 5 | 0.821 |
| 50 | 50 | 0.538 |
| 51 | 51 | 0.989 |
| 52 | 52 | 0.106 |
| 53 | 53 | 0.793 |
| 54 | 54 | 0.669 |
| 55 | 55 | 0.877 |
| 56 | 56 | 0.908 |
| 57 | 57 | 0.698 |
| 58 | 58 | 0.68 |
| 59 | 59 | 0.0829 |
| 6 | 6 | 0.961 |
| 60 | 60 | 0.123 |
| 61 | 61 | 0.672 |
| 62 | 62 | 0.498 |
| 63 | 63 | 0.211 |
| 64 | 64 | 0.981 |
| 65 | 65 | 0.267 |
| 66 | 66 | 0.0149 |
| 67 | 67 | 0.259 |
| 68 | 68 | 0.31 |
| 69 | 69 | 0.269 |
| 7 | 7 | 0.492 |
| 70 | 70 | 0.644 |
| 71 | 71 | 0.889 |
| 72 | 72 | 0.49 |
| 73 | 73 | 0.269 |
| 74 | 74 | 0.0479 |
| 75 | 75 | 0.976 |
| 76 | 76 | 0.0439 |
| 77 | 77 | 0.0183 |
| 78 | 78 | 0.178 |
| 79 | 79 | 0.169 |
| 8 | 8 | 0.459 |
| 80 | 80 | 0.792 |
| 81 | 81 | 0.0962 |
| 82 | 82 | 0.35 |
| 83 | 83 | 0.823 |
| 84 | 84 | 0.374 |
| 85 | 85 | 0.0245 |
| 86 | 86 | 0.419 |
| 87 | 87 | 0.693 |
| 88 | 88 | 0.631 |
| 89 | 89 | 0.0128 |
| 9 | 9 | 0.542 |
| 90 | 90 | 0.3 |
| 91 | 91 | 0.117 |
| 92 | 92 | 0.19 |
| 93 | 93 | 0.982 |
| 94 | 94 | 0.154 |
| 95 | 95 | 0.631 |
| 96 | 96 | 0.99 |
| 97 | 97 | 0.484 |
| 98 | 98 | 0.723 |
| 99 | 99 | 0.0701 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12853
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010203 human tongue - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0001723 (tongue)
0000033 (head)
0000479 (tissue)
0001007 (digestive system)
0004121 (ectoderm-derived structure)
0004119 (endoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0001444 (subdivision of head)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000020 (sense organ)
0001032 (sensory system)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000165 (mouth)
0004456 (entire sense organ system)
0001033 (gustatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010203 (human tongue - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006595 (presumptive endoderm)
UBERON:0008814 (pharyngeal arch system)
UBERON:0010056 (future tongue)
UBERON:0010316 (germ layer / neural crest)
