FF:1353-25F3: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005166 | ||
|accession_numbers=CAGE;DRX009012;DRR009886;DRZ001311;DRZ002694;DRZ012661;DRZ014044 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002113,UBERON:0002100,UBERON:0000479,UBERON:0000062,UBERON:0000475,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0009569,UBERON:0000489,UBERON:0005177,UBERON:0005172,UBERON:0005173,UBERON:0011143,UBERON:0001008,UBERON:0002417,UBERON:0000916 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000004,FF:0000303,FF:0000309,FF:0011482 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr11:83664365..83664383,+!p1@Hnf1b!1.97!92.32!Hnf1b;;chr10:88969376..88969395,-!p1@Nr1h4!1.93!83.84!Nr1h4;;chr2:163372884..163372904,+!p1@Hnf4a!1.85!69.24!Hnf4a;;chr1:120524520..120524528,+!p1@Tfcp2l1!1.74!148.36!Tfcp2l1;;chr1:42752574..42752621,+!p@chr1:42752574..42752621,+!1.68!59.35!Pou3f3;;chr2:24331085..24331100,-!p1@Pax8!1.67!46.16!Pax8;;chr10:22539932..22539956,-!p1@Tcf21!1.59!97.65!Tcf21;;chr11:96143666..96143725,+!p1@Hoxb8!1.59!43.49!Hoxb8;;chr11:34108085..34108092,-!p1@Foxi1!1.57!36.42!Foxi1;;chr15:102828658..102828678,+!p1@Hoxc6!1.57!36.42!Hoxc6;;chr6:52190467..52190500,-!p1@Hoxa10!1.55!34.38!Hoxa10;;chr10:30491690..30491727,-!p5@Ncoa7!1.49!30.14!Ncoa7;;chr15:97738692..97738747,-!p1@Vdr!1.48!152.92!Vdr;;chr1:19202352..19202354,+!p2@Tfap2b!1.45!27.47!Tfap2b;;chr6:52176164..52176195,-!p1@Hoxa9!1.43!32.18!Hoxa9;;chr11:96153767..96153822,+!p1@Hoxb6!1.40!36.74!Hoxb6;;chr5:135582751..135582788,+!p1@Mlxipl!1.38!88.86!Mlxipl;;chr6:38097380..38097407,-!p6@D630045J12Rik!1.37!22.29!D630045J12Rik;;chr5:115421065..115421088,-!p1@Hnf1a!1.36!21.82!Hnf1a;;chr6:85137520..85137563,+!p1@Emx1!1.33!20.25!Emx1;;chr2:74529970..74529997,+!p1@Hoxd10!1.32!20.10!Hoxd10;;chr1:189432881..189432903,+!p2@Esrrg!1.30!18.84!Esrrg;;chr12:87762578..87762612,+!p1@Esrrb!1.29!18.68!Esrrb;;chr6:97879817..97879857,+!p2@Mitf!1.27!17.43!Mitf;;chr8:118231678..118231692,-!p2@Maf!1.23!141.77!Maf;;chr1:189433521..189433548,+!p5@Esrrg!1.23!15.86!Esrrg;;chr19:59533221..59533271,+!p1@Emx2!1.22!19.00!Emx2;;chr2:74549968..74549996,+!p1@Hoxd3!1.21!19.15!Hoxd3;;chr6:52190840..52190853,-!p5@Hoxa10!1.20!14.91!Hoxa10;;chr1:189432907..189432926,+!p3@Esrrg!1.19!14.60!Esrrg;;chr2:74542680..74542705,+!p6@Hoxd8!1.15!13.19!Hoxd8;;chr2:103143336..103143367,-!p1@Ehf!1.09!18.21!Ehf;;chr11:96147952..96147967,+!p1@Hoxb7!1.09!14.29!Hoxb7;;chr1:19199236..19199258,+!p1@Tfap2b!1.09!11.30!Tfap2b;;chr2:74543397..74543435,+!p2@Hoxd8!1.07!10.83!Hoxd8;;chr11:84339016..84339044,-!p1@Lhx1!1.06!10.52!Lhx1;;chr2:77357622..77357704,-!p1@Zfp385b!1.05!28.10!Zfp385b;;chr3:30408674..30408716,-!p2@Mecom!1.05!16.96!Mecom;;chr13:72101178..72101203,-!p1@Irx1!1.04!15.54!Irx1;;chr6:52163319..52163342,-!p1@Hoxa3!1.03!14.13!Hoxa3;;chr1:19202185..19202187,+!p9@Tfap2b!1.02!9.42!Tfap2b;;chr4:154010409..154010466,-!p2@Prdm16!1.00!21.19!Prdm16;;chr2:74543202..74543213,+!p3@Hoxd8!1.00!8.95!Hoxd8;;chr2:74536026..74536039,+!p1@Hoxd9!1.00!8.95!Hoxd9;;chr19:44831390..44831414,+!p1@Pax2!1.00!8.95!Pax2;;chr16:43363968..43364001,+!p7@Zbtb20!0.99!16.33!Zbtb20;;chr10:102491405..102491416,-!p1@Alx1!0.99!8.79!Alx1;;chr4:120488308..120488366,-!p1@Nfyc!0.98!50.24!Nfyc;;chr10:50614546..50614568,+!p@chr10:50614546..50614568,+!0.98!8.63!Sim1;;chr8:118231705..118231722,-!p3@Maf!0.97!68.29!Maf;;chr1:137155026..137155042,-!p1@Elf3!0.97!49.45!Elf3;;chr19:28754692..28754757,-!p1@Glis3!0.97!35.80!Glis3;;chr16:94085471..94085495,+!p1@Sim2!0.97!8.32!Sim2;;chr2:74542918..74542971,+!p1@Hoxd8!0.96!12.56!Hoxd8;;chr2:9800207..9800234,-!p1@Gata3!0.95!24.96!Gata3;;chr2:74529998..74530020,+!p2@Hoxd10!0.95!7.85!Hoxd10;;chr2:103123925..103123959,-!p3@Ehf!0.95!7.85!Ehf;;chr16:43363152..43363186,+!p3@Zbtb20!0.93!17.58!Zbtb20;;chr2:104966766..104966786,+!p1@Wt1!0.91!11.62!Wt1;;chr3:3508024..3508069,+!p2@Hnf4g!0.91!7.22!Hnf4g;;chr11:83666422..83666446,+!p4@Hnf1b!0.91!7.22!Hnf1b;;chr2:163372869..163372882,+!p3@Hnf4a!0.91!7.06!Hnf4a;;chr16:4594740..4594759,+!p1@Glis2!0.89!81.33!Glis2;;chr3:30408603..30408668,-!p1@Mecom!0.88!15.70!Mecom;;chr15:102828642..102828653,+!p2@Hoxc6!0.88!6.59!Hoxc6;;chr13:72101161..72101177,-!p2@Irx1!0.87!9.11!Irx1;;chr12:87702062..87702081,+!p4@Esrrb!0.87!6.44!Esrrb;;chr6:52184901..52184959,-!p2@Hoxa10!0.87!6.44!Hoxa10;;chr10:30491648..30491657,-!p15@Ncoa7!0.87!6.44!Ncoa7;;chr1:57029281..57029326,-!p1@Satb2!0.86!10.05!Satb2;;chr16:43247391..43247422,+!p12@Zbtb20!0.86!6.28!Zbtb20;;chr11:96145450..96145517,+!p2@Hoxb7!0.85!9.42!Hoxb7;;chr6:52167459..52167492,-!p1@Hoxa7!0.85!7.38!Hoxa7;;chr19:59532915..59532940,+!p5@Emx2!0.85!6.12!Emx2;;chr15:85566184..85566238,+!p1@Ppara!0.83!8.95!Ppara;;chr15:85602581..85602598,+!p8@Ppara!0.83!5.81!Ppara;;chr2:74543103..74543135,+!p4@Hoxd8!0.83!5.81!Hoxd8;;chr8:118231723..118231740,-!p1@Maf!0.82!134.70!Maf;;chr4:107107224..107107259,+!p2@Glis1!0.82!5.65!Glis1;;chr6:38097421..38097440,-!p7@D630045J12Rik!0.82!5.65!D630045J12Rik;;chr16:38294860..38294924,-!p1@Nr1i2!0.81!5.49!Nr1i2;;chr2:74542589..74542602,+!p8@Hoxd8!0.81!5.49!Hoxd8;;chr11:83665637..83665671,+!p6@Hnf1b!0.81!5.49!Hnf1b;;chr2:164829847..164829859,-!p5@Ncoa5!0.80!5.34!Ncoa5;;chr8:79426176..79426275,+!p1@Nr3c2!0.79!27.79!Nr3c2;;chr11:96160426..96160443,+!p2@Hoxb6!0.79!5.18!Hoxb6;;chr16:43363190..43363242,+!p2@Zbtb20!0.78!16.48!Zbtb20;;chr3:29912058..29912071,-!p6@Mecom!0.77!5.65!Mecom;;chr2:74549945..74549965,+!p4@Hoxd3!0.77!4.87!Hoxd3;;chr6:52190668..52190682,-!p3@Hoxa10!0.77!4.87!Hoxa10;;chr11:98636531..98636559,-!p1@Nr1d1!0.76!29.83!Nr1d1;;chr6:85137505..85137517,+!p2@Emx1!0.76!4.71!Emx1;;chr6:52195763..52195792,-!p2@Hoxa11!0.76!4.71!Hoxa11;;chr15:35225845..35225867,+!p1@Osr2!0.75!12.40!Osr2;;chr10:30375579..30375616,-!p3@Ncoa7!0.75!11.77!Ncoa7;;chr6:90412582..90412601,+!p1@Klf15!0.74!23.24!Klf15;;chr2:160698288..160698358,-!p3@Zhx3!0.74!15.23!Zhx3;;chr8:94325321..94325366,-!p1@Irx3!0.74!11.77!Irx3;;chr19:28754600..28754612,-!p2@Glis3!0.74!7.54!Glis3;;chr1:42752654..42752665,+!p@chr1:42752654..42752665,+!0.74!4.55!Pou3f3;;chr2:9809357..9809371,-!p2@Gata3!0.74!4.55!Gata3;;chr11:96143962..96144035,+!p2@Hoxb8!0.74!4.55!Hoxb8;;chr14:22807107..22807119,-!p2@Zfp503!0.73!20.88!Zfp503;;chr14:17407878..17407926,-!p1@Rarb!0.73!10.68!Rarb;;chr13:72766279..72766296,+!p2@Irx2!0.73!6.75!Irx2;;chr11:98614335..98614349,+!p8@Thra!0.73!4.40!Thra;;chr2:74542882..74542894,+!p10@Hoxd8!0.73!4.40!Hoxd8;;chr2:74535796..74535808,+!p3@Hoxd9!0.73!4.40!Hoxd9;;chr11:90252223..90252240,-!p1@Hlf!0.72!39.56!Hlf;;chr11:85646303..85646329,+!p1@Tbx2!0.72!31.56!Tbx2;;chr11:85646469..85646488,+!p5@Tbx2!0.72!6.59!Tbx2;;chr6:52167513..52167549,-!p2@Hoxa7!0.72!6.28!Hoxa7;;chr16:43236133..43236154,+!p17@Zbtb20!0.72!5.02!Zbtb20;;chr11:83664334..83664353,+!p2@Hnf1b!0.72!4.24!Hnf1b;;chr10:102491237..102491291,-!p2@Alx1!0.72!4.24!Alx1;;chr6:85137491..85137504,+!p3@Emx1!0.71!4.08!Emx1;;chr1:189432857..189432870,+!p7@Esrrg!0.71!4.08!Esrrg;;chr2:103264213..103264233,+!p1@Elf5!0.71!4.08!Elf5;;chr2:74517742..74517758,+!p2@Hoxd11!0.71!4.08!Hoxd11;;chr17:87153240..87153254,+!p1@Epas1!0.70!89.02!Epas1;;chr16:43619101..43619151,+!p6@Zbtb20!0.70!10.52!Zbtb20;;chr8:94325814..94325839,-!p2@Irx3!0.69!8.95!Irx3;;chr10:5734907..5734920,-!p11@Esr1!0.69!3.92!Esr1;;chr2:103252231..103252256,+!p4@Elf5!0.69!3.92!Elf5;;chr11:100800641..100800669,-!p3@Stat3!0.68!7.06!Stat3;;chr11:96213288..96213332,+!p@chr11:96213288..96213332,+!0.68!6.91!Hoxb2;;chr14:22807216..22807231,-!p3@Zfp503!0.68!6.91!Zfp503;;chr15:85566051..85566080,+!p4@Ppara!0.68!4.55!Ppara;;chr6:38097369..38097379,-!p11@D630045J12Rik!0.68!3.77!D630045J12Rik;;chr3:98186461..98186476,+!p2@Zfp697!0.68!3.77!Zfp697;;chr11:96143843..96143868,+!p3@Hoxb8!0.68!3.77!Hoxb8;;chr11:90250894..90250916,-!p5@Hlf!0.68!3.77!Hlf;;chr7:77511234..77511302,-!p2@Nr2f2!0.67!28.26!Nr2f2;;chr13:31650185..31650201,+!p1@Foxq1!0.67!14.44!Foxq1;;chr13:72766250..72766273,+!p1@Irx2!0.67!6.12!Irx2;;chr14:22808697..22808715,-!p4@Zfp503!0.67!4.40!Zfp503;;chr11:121380640..121380655,-!p1@Zfp750!0.66!6.28!Zfp750;;chr13:96093557..96093561,+!p6@Zbed3!0.66!3.61!Zbed3;;chr3:3508005..3508021,+!p3@Hnf4g!0.66!3.61!Hnf4g;;chr2:74560109..74560131,+!p1@Hoxd4!0.66!3.61!Hoxd4;;chr16:43619057..43619078,+!p8@Zbtb20!0.65!7.85!Zbtb20;;chr9:106355684..106355744,+!p5@Pcbp4!0.65!5.65!Pcbp4;;chr6:52176144..52176161,-!p2@Hoxa9!0.65!3.45!Hoxa9;;chr1:120524563..120524591,+!p2@Tfcp2l1!0.65!3.45!Tfcp2l1;;chr14:22807083..22807104,-!p1@Zfp503!0.64!69.08!Zfp503;;chr4:148275237..148275311,+!p2@Casz1!0.63!15.70!Casz1;;chr11:90250944..90250982,-!p2@Hlf!0.63!5.97!Hlf;;chr2:91035254..91035271,-!p3@Nr1h3!0.63!4.24!Nr1h3;;chr13:72101141..72101158,-!p3@Irx1!0.63!4.24!Irx1;;chr11:100800621..100800633,-!p5@Stat3!0.63!3.92!Stat3;;chr2:74536050..74536065,+!p2@Hoxd9!0.63!3.30!Hoxd9;;chr4:133109285..133109308,+!p1@Nr0b2!0.63!3.30!Nr0b2;;chr15:81633165..81633188,+!p2@Tef!0.62!30.93!Tef;;chr17:87153028..87153049,+!p2@Epas1!0.61!75.52!Epas1;;chr11:85646341..85646352,+!p3@Tbx2!0.61!6.75!Tbx2;;chr19:25746898..25746910,+!p1@Dmrt2!0.61!4.87!Dmrt2;;chr3:30408384..30408431,-!p4@Mecom!0.61!4.08!Mecom;;chr14:18493386..18493464,+!p1@Thrb!0.60!13.34!Thrb;;chr16:43363837..43363842,+!p11@Zbtb20!0.60!6.12!Zbtb20;;chr2:74543235..74543246,+!p7@Hoxd8!0.60!2.98!Hoxd8;;chr7:119885539..119885574,+!p3@Tead1!0.60!2.98!Tead1;;chr6:52190858..52190873,-!p4@Hoxa10!0.60!2.98!Hoxa10;;chr11:96690797..96690813,-!p1@Nfe2l1!0.59!67.98!Nfe2l1;;chr2:152758901..152758925,-!p1@Foxs1!0.59!15.07!Foxs1;;chr16:44173384..44173407,+!p2@Gm608!0.59!8.63!Gm608;;chr7:77511403..77511450,-!p3@Nr2f2!0.59!6.91!Nr2f2;;chr8:123640063..123640077,+!p1@Foxc2!0.59!5.81!Foxc2;;chr1:87546583..87546595,+!p1@Sp100!0.59!4.40!Sp100;;chr10:88996336..88996380,-!p2@Nr1h4!0.59!3.77!Nr1h4;;chr14:98568971..98569025,-!p1@Dach1!0.58!26.06!Dach1;;chr11:70043257..70043263,-!p1@Bcl6b!0.58!5.34!Bcl6b;;chr10:5734717..5734727,-!p12@Esr1!0.58!2.83!Esr1;;chr6:52167434..52167450,-!p3@Hoxa7!0.58!2.83!Hoxa7;;chr15:102797288..102797302,+!p1@Hoxc10!0.58!2.83!Hoxc10;;chr12:75002389..75002406,+!p4@Hif1a!0.58!2.83!Hif1a;;chr1:19199021..19199048,+!p8@Tfap2b!0.58!2.83!Tfap2b;;chr2:103143315..103143328,-!p2@Ehf!0.58!2.83!Ehf;;chr2:74542974..74542986,+!p5@Hoxd8!0.58!2.83!Hoxd8;;chr2:74550015..74550057,+!p2@Hoxd3!0.58!2.83!Hoxd3;;chr15:76709662..76709676,+!p2@Zfp7!0.57!6.44!Zfp7;;chr11:85646427..85646451,+!p4@Tbx2!0.57!5.34!Tbx2;;chr18:24178808..24178865,-!p2@Zfp191!0.56!17.43!Zfp191;;chr13:99124189..99124205,+!p1@Foxd1!0.56!4.40!Foxd1;;chr2:74517609..74517621,+!p3@Hoxd11!0.56!2.67!Hoxd11;;chr10:30522690..30522752,-!p2@Ncoa7!0.55!19.31!Ncoa7;;chr6:38204087..3820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ecom;;chr2:77357593..77357606,-!p6@Zfp385b!0.33!1.41!Zfp385b;;chr17:47873985..47874056,+!p1@Tfeb!0.32!15.07!Tfeb;;chr1:191994550..191994623,-!p1@Prox1!0.32!12.56!Prox1;;chr8:118230866..118230891,-!p4@Maf!0.32!11.77!Maf;;chr6:37392159..37392172,-!p2@Creb3l2!0.32!8.01!Creb3l2;;chr5:125538737..125538781,-!p2@Ncor2!0.32!6.12!Ncor2;;chr17:13897299..13897342,+!p3@Mllt4!0.32!3.61!Mllt4;;chr4:102787521..102787588,+!p4@Mier1!0.32!2.67!Mier1;;chr13:37918661..37918673,+!p17@Rreb1!0.32!1.41!Rreb1;;chr15:35225873..35225889,+!p2@Osr2!0.32!1.10!Osr2;;chr4:53792566..53792578,+!p1@Tal2!0.32!1.10!Tal2;;chr4:84192360..84192376,-!p8@Bnc2!0.32!1.10!Bnc2;;chr2:103264245..103264268,+!p2@Elf5!0.32!1.10!Elf5;;chr1:19199221..19199234,+!p6@Tfap2b!0.32!1.10!Tfap2b;;chr1:19199064..19199075,+!p10@Tfap2b!0.32!1.10!Tfap2b;;chr1:173144100..173144138,+!p2@Nr1i3!0.32!1.10!Nr1i3;;chr19:59534008..59534046,+!p7@Emx2!0.32!1.10!Emx2;;chr18:81183755..81183761,-!p1@Sall3!0.32!1.10!Sall3;;chr19:23215616..23215627,+!p9@Klf9!0.32!1.10!Klf9;;chr16:43235969..43235989,+!p20@Zbtb20!0.32!1.10!Zbtb20;;chr10:30522660..30522671,-!p10@Ncoa7!0.32!1.10!Ncoa7;;chr6:38097441..38097447,-!p13@D630045J12Rik!0.32!1.10!D630045J12Rik;;chr5:115420882..115420896,-!p3@Hnf1a!0.32!1.10!Hnf1a;;chr2:75542527..75542590,-!p1@Nfe2l2!0.31!166.42!Nfe2l2;;chr3:152059628..152059666,+!p2@Gm8261,p2@Zzz3!0.31!15.54!Zzz3;;chr17:71199121..71199165,-!p2@Tgif1!0.31!12.56!Tgif1;;chr6:38204109..38204155,-!p1@D630045J12Rik!0.31!9.26!D630045J12Rik;;chr16:44173352..44173383,+!p1@Gm608!0.31!8.63!Gm608;;chr17:15701286..15701323,-!p1@Prdm9!0.31!6.59!Prdm9;;chr7:91558392..91558434,-!p1@Arnt2!0.31!4.40!Arnt2;;chr15:57526316..57526332,+!p4@Zhx2!0.31!3.61!Zhx2;;chr4:62626682..62626705,+!p2@Zfp618!0.31!3.45!Zfp618;;chr9:96653241..96653288,-!p1@E030011O05Rik,p5@Zbtb38!0.31!2.67!Zbtb38;;chr18:76219118..76219155,+!p1@Zbtb7c!0.31!2.51!Zbtb7c;;chr2:165818125..165818167,+!p1@Ncoa3!0.30!47.26!Ncoa3;;chr2:160698721..160698745,-!p1@Zhx3!0.30!25.59!Zhx3;;chr5:104183173..104183207,+!p1@Aff1!0.30!23.55!Aff1;;chr4:62626594..62626651,+!p1@Zfp618!0.30!6.12!Zfp618;;chr14:79881330..79881415,+!p3@Elf1!0.30!5.34!Elf1;;chr15:10400245..10400282,-!p2@Dnajc21!0.30!5.34!Dnajc21;;chr18:75979866..75979890,+!p3@Zbtb7c!0.30!2.98!Zbtb7c;;chr1:133914326..133914346,+!p8@Elk4!0.30!2.51!Elk4;;chr4:45024818..45024846,-!p4@Zbtb5!0.30!2.51!Zbtb5;;chr15:50721211..50721234,-!p6@Trps1!0.30!2.20!Trps1;;chr7:52963269..52963305,+!p4@Dbp!0.30!1.73!Dbp;;chr19:5560600..5560617,-!p1@Ovol1!0.30!1.41!Ovol1;;chr6:52663725..52663794,+!p1@Tax1bp1!0.29!263.29!Tax1bp1;;chr2:166888107..166888224,-!p1@Znfx1!0.29!25.28!Znfx1;;chr7:120351014..120351109,+!p1@Arntl!0.29!23.86!Arntl;;chr13:44826694..44826710,+!p3@Jarid2!0.29!18.84!Jarid2;;chr17:34730333..34730362,+!p2@Pbx2!0.29!6.28!Pbx2;;chr7:134169741..134169760,-!p10@Maz!0.29!4.55!Maz;;chr2:115891454..115891471,-!p3@Meis2!0.29!4.55!Meis2;;chr2:165818108..165818119,+!p2@Ncoa3!0.29!3.77!Ncoa3;;chr1:52176406..52176433,+!p2@Stat1!0.29!3.61!Stat1;;chr4:97439519..97439539,+!p11@Nfia!0.29!2.98!Nfia;;chr8:94881733..94881790,+!p1@Irx5!0.29!2.67!Irx5;;chr7:25917492..25917512,-!p1@Pou2f2!0.29!2.20!Pou2f2;;chr9:69137709..69137714,+!p7@Rora!0.29!1.41!Rora;;chr8:94325273..94325288,-!p5@Irx3!0.29!1.41!Irx3;;chr11:96213264..96213282,+!p@chr11:96213264..96213282,+!0.29!1.41!Hoxb2;;chr2:180069370..180069409,-!p1@Gata5!0.29!1.26!Gata5;;chr2:105003277..105003280,+!p5@Wt1!0.29!0.94!Wt1;;chr2:74536003..74536008,+!p7@Hoxd9!0.29!0.94!Hoxd9;;chr14:17408022..17408043,-!p6@Rarb!0.29!0.94!Rarb;;chr12:87762617..87762622,+!p13@Esrrb!0.29!0.94!Esrrb;;chr13:40825465..40825469,-!p2@Tfap2a!0.29!0.94!Tfap2a;;chr12:75002335..75002352,+!p7@Hif1a!0.29!0.94!Hif1a;;chr15:85602655..85602680,+!p5@Ppara!0.29!0.94!Ppara;;chr11:96164821..96164865,+!p1@Hoxb5!0.29!0.94!Hoxb5;;chr6:38097449..38097457,-!p16@D630045J12Rik!0.29!0.94!D630045J12Rik;;chr5:120130377..120130432,+!p10@Tbx3!0.29!0.94!Tbx3;;chr7:25917459..25917474,-!p2@Pou2f2!0.29!0.94!Pou2f2;;chr7:77511928..77511937,-!p12@Nr2f2!0.29!0.94!Nr2f2;;chr1:181476358..181476391,-!p1@Tfb2m!0.28!26.38!Tfb2m;;chr5:134790548..134790591,-!p3@Gtf2i!0.28!18.84!Gtf2i;;chr14:55482892..55482988,-!p1@Homez!0.28!11.15!Homez;;chr19:26679596..26679607,+!p8@Smarca2!0.28!2.83!Smarca2;;chr5:147760297..147760304,+!p4@Gtf3a!0.28!2.35!Gtf3a;;chr5:92391948..92391968,+!p3@Thap6!0.28!1.88!Thap6;;chr10:127176667..127176679,+!p2@Zbtb39!0.28!1.88!Zbtb39;;chr1:4486530..4486557,-!p4@Sox17!0.28!1.41!Sox17;;chr6:52664406..52664434,+!p3@Tax1bp1!0.28!1.26!Tax1bp1;;chr6:37392095..37392154,-!p1@Creb3l2!0.27!52.44!Creb3l2;;chr15:36937137..36937157,-!p2@Gm10193,p2@Zfp706!0.27!50.87!Zfp706;;chr5:67698180..67698216,+!p1@Slc30a9!0.27!43.80!Slc30a9;;chr5:137043177..137043190,-!p2@Cux1!0.27!13.34!Cux1;;chr3:95021612..95021650,-!p2@Gabpb2!0.27!7.85!Gabpb2;;chr5:9160908..9160912,-!p2@Dmtf1!0.27!6.28!Dmtf1;;chr2:44968721..44968734,-!p6@Zeb2!0.27!5.65!Zeb2;;chr11:96690779..96690790,-!p3@Nfe2l1!0.27!3.30!Nfe2l1;;chr6:39068181..39068206,-!p3@Parp12!0.27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6..74634804,-!p5@Zfp142!0.13!0.78!Zfp142;;chr2:115888250..115888298,-!p10@Meis2!0.13!0.63!Meis2;;chr13:31898767..31898785,+!p4@Foxc1!0.13!0.63!Foxc1;;chr15:57526415..57526425,+!p7@Zhx2!0.13!0.63!Zhx2;;chr8:107033774..107033794,-!p1@Ccdc79!0.13!0.63!Ccdc79;;chr2:90922519..90922544,+!p6@Sfpi1!0.13!0.47!Sfpi1;;chr10:79390120..79390129,+!p4@Arid3a!0.13!0.47!Arid3a;;chr2:17977331..17977360,+!p11@Mllt10!0.13!0.47!Mllt10;;chr2:91864661..91864686,-!p1@Creb3l1!0.12!25.43!Creb3l1;;chr16:50432467..50432522,-!p1@Bbx!0.12!22.76!Bbx;;chr12:4484016..4484074,-!p1@Ncoa1!0.12!19.00!Ncoa1;;chr3:152058955..152059023,+!p1@Gm8261,p1@Zzz3!0.12!14.29!Zzz3;;chr9:55785900..55785950,-!p1@Scaper!0.12!11.30!Scaper;;chr9:32348943..32349001,-!p1@Fli1!0.12!8.95!Fli1;;chr3:94641624..94641645,+!p2@Pogz!0.12!7.38!Pogz;;chr6:133985993..133986029,+!p2@Etv6!0.12!6.91!Etv6;;chr14:64562503..64562524,+!p1@Sox7!0.12!6.28!Sox7;;chr3:52072296..52072310,+!p3@Foxo1!0.12!5.18!Foxo1;;chr16:3847206..3847307,+!p1@Zfp174!0.12!5.02!Zfp174;;chr7:28623579..28623631,+!p1@Zfp59!0.12!4.87!Zfp59;;chr10:5958538..5958568,+!p1@Zbtb2!0.12!4.55!Zbtb2;;chr7:133838869..133838945,+!p2@Bola2!0.12!4.24!Bola2;;chr8:72498134..72498156,-!p7@Gatad2a!0.12!3.77!Gatad2a;;chr4:149862477..149862553,+!p3@Rere!0.12!3.45!Rere;;chr10:127984472..127984504,-!p2@Zc3h10!0.12!2.98!Zc3h10;;chrX:92906980..92907024,+!p2@Zc3h12b!0.12!2.20!Zc3h12b;;chr10:127896024..127896045,+!p3@Smarcc2!0.12!2.04!Smarcc2;;chr15:50720601..50720630,-!p2@Trps1!0.12!2.04!Trps1;;chr18:3281750..3281776,-!p2@Crem!0.12!1.57!Crem;;chr2:37286328..37286341,-!p3@Zbtb6!0.12!1.57!Zbtb6;;chr18:3337399..3337422,-!p11@Crem!0.12!1.10!Crem;;chr10:82226709..82226720,-!p6@Nfyb!0.12!1.10!Nfyb;;chr7:119822915..119822936,+!p5@Tead1!0.12!1.10!Tead1;;chr1:13364153..13364156,-!p5@Ncoa2!0.12!0.94!Ncoa2;;chr15:75771423..75771445,+!p2@Zfp623!0.12!0.94!Zfp623;;chr2:70313168..70313184,+!p1@Sp5!0.12!0.94!Sp5;;chr4:151363123..151363134,-!p2@Thap3!0.12!0.94!Thap3;;chr12:74214394..74214422,-!p1@Six4!0.12!0.78!Six4;;chr8:79423144..79423178,+!p3@Nr3c2!0.12!0.78!Nr3c2;;chr5:77695390..77695414,+!p2@Rest!0.12!0.63!Rest;;chr3:30995296..30995300,+!p6@Skil!0.12!0.63!Skil;;chr10:127095407..127095440,+!p3@Stat6!0.12!0.63!Stat6;;chr18:69752598..69752607,+!p26@Tcf4!0.12!0.47!Tcf4;;chr16:55838940..55838966,-!p5@Nfkbiz!0.12!0.47!Nfkbiz;;chr16:14705746..14705761,+!p4@Snai2!0.12!0.31!Snai2;;chr19:12871044..12871058,-!p3@Zfp91!0.12!0.31!Zfp91;;chr16:25801993..25802014,+!p1@Trp63!0.12!0.31!Trp63;;chr18:69681413..69681424,+!p24@Tcf4!0.12!0.31!Tcf4;;chr16:94085162..94085179,+!p3@Sim2!0.12!0.31!Sim2;;chr16:43364258..43364270,+!p27@Zbtb20!0.12!0.31!Zbtb20;;chr10:30375559..30375568,-!p9@Ncoa7!0.12!0.31!Ncoa7;;chr11:96145362..96145389,+!p4@Hoxb7!0.12!0.31!Hoxb7;;chr11:96132456..96132467,+!p4@Hoxb9!0.12!0.31!Hoxb9;;chr11:96976641..96976646,-!p1@Tbx21!0.12!0.31!Tbx21;;chr11:58717647..58717659,-!p3@Zfp39!0.12!0.31!Zfp39;;chr11:60034039..60034050,-!p4@Srebf1!0.12!0.31!Srebf1;;chr10:5636354..5636373,-!p2@Esr1!0.12!0.31!Esr1;;chr11:69749491..69749502,+!p6@Ybx2!0.12!0.31!Ybx2;;chr11:5420655..5420659,+!p3@Xbp1!0.12!0.31!Xbp1;;chr10:5734473..5734489,-!p5@Esr1!0.12!0.31!Esr1;;chr11:62272200..62272221,-!p11@Ncor1!0.12!0.31!Ncor1;;chr7:52252978..52252989,+!p5@Irf3!0.12!0.31!Irf3;;chr8:94325779..94325791,-!p7@Irx3!0.12!0.31!Irx3;;chr8:87238155..87238187,-!p13@Nfix!0.12!0.31!Nfix;;chr9:63514609..63514620,-!p10@Smad3!0.12!0.31!Smad3;;chr8:123651727..123651748,+!p1@ENSMUST00000062634!0.12!0.31!Foxl1;;chr9:63514630..63514652,-!p8@Smad3!0.12!0.31!Smad3;;chr9:96159133..96159145,+!p9@Tfdp2!0.12!0.31!Tfdp2;;chr2:104966465..104966479,+!p6@Wt1!0.12!0.31!Wt1;;chr2:104966874..104966907,+!p2@Wt1!0.12!0.31!Wt1;;chr1:57029076..57029098,-!p8@Satb2!0.12!0.31!Satb2;; | |expression_enrichment_score=chr11:83664365..83664383,+!p1@Hnf1b!1.97!92.32!Hnf1b;;chr10:88969376..88969395,-!p1@Nr1h4!1.93!83.84!Nr1h4;;chr2:163372884..163372904,+!p1@Hnf4a!1.85!69.24!Hnf4a;;chr1:120524520..120524528,+!p1@Tfcp2l1!1.74!148.36!Tfcp2l1;;chr1:42752574..42752621,+!p@chr1:42752574..42752621,+!1.68!59.35!Pou3f3;;chr2:24331085..24331100,-!p1@Pax8!1.67!46.16!Pax8;;chr10:22539932..22539956,-!p1@Tcf21!1.59!97.65!Tcf21;;chr11:96143666..96143725,+!p1@Hoxb8!1.59!43.49!Hoxb8;;chr11:34108085..34108092,-!p1@Foxi1!1.57!36.42!Foxi1;;chr15:102828658..102828678,+!p1@Hoxc6!1.57!36.42!Hoxc6;;chr6:52190467..52190500,-!p1@Hoxa10!1.55!34.38!Hoxa10;;chr10:30491690..30491727,-!p5@Ncoa7!1.49!30.14!Ncoa7;;chr15:97738692..97738747,-!p1@Vdr!1.48!152.92!Vdr;;chr1:19202352..19202354,+!p2@Tfap2b!1.45!27.47!Tfap2b;;chr6:52176164..52176195,-!p1@Hoxa9!1.43!32.18!Hoxa9;;chr11:96153767..96153822,+!p1@Hoxb6!1.40!36.74!Hoxb6;;chr5:135582751..135582788,+!p1@Mlxipl!1.38!88.86!Mlxipl;;chr6:38097380..38097407,-!p6@D630045J12Rik!1.37!22.29!D630045J12Rik;;chr5:115421065..115421088,-!p1@Hnf1a!1.36!21.82!Hnf1a;;chr6:85137520..85137563,+!p1@Emx1!1.33!20.25!Emx1;;chr2:74529970..74529997,+!p1@Hoxd10!1.32!20.10!Hoxd10;;chr1:189432881..189432903,+!p2@Esrrg!1.30!18.84!Esrrg;;chr12:87762578..87762612,+!p1@Esrrb!1.29!18.68!Esrrb;;chr6:97879817..97879857,+!p2@Mitf!1.27!17.43!Mitf;;chr8:118231678..118231692,-!p2@Maf!1.23!141.77!Maf;;chr1:189433521..189433548,+!p5@Esrrg!1.23!15.86!Esrrg;;chr19:59533221..59533271,+!p1@Emx2!1.22!19.00!Emx2;;chr2:74549968..74549996,+!p1@Hoxd3!1.21!19.15!Hoxd3;;chr6:52190840..52190853,-!p5@Hoxa10!1.20!14.91!Hoxa10;;chr1:189432907..189432926,+!p3@Esrrg!1.19!14.60!Esrrg;;chr2:74542680..74542705,+!p6@Hoxd8!1.15!13.19!Hoxd8;;chr2:103143336..103143367,-!p1@Ehf!1.09!18.21!Ehf;;chr11:96147952..96147967,+!p1@Hoxb7!1.09!14.29!Hoxb7;;chr1:19199236..19199258,+!p1@Tfap2b!1.09!11.30!Tfap2b;;chr2:74543397..74543435,+!p2@Hoxd8!1.07!10.83!Hoxd8;;chr11:84339016..84339044,-!p1@Lhx1!1.06!10.52!Lhx1;;chr2:77357622..77357704,-!p1@Zfp385b!1.05!28.10!Zfp385b;;chr3:30408674..30408716,-!p2@Mecom!1.05!16.96!Mecom;;chr13:72101178..72101203,-!p1@Irx1!1.04!15.54!Irx1;;chr6:52163319..52163342,-!p1@Hoxa3!1.03!14.13!Hoxa3;;chr1:19202185..19202187,+!p9@Tfap2b!1.02!9.42!Tfap2b;;chr4:154010409..154010466,-!p2@Prdm16!1.00!21.19!Prdm16;;chr2:74543202..74543213,+!p3@Hoxd8!1.00!8.95!Hoxd8;;chr2:74536026..74536039,+!p1@Hoxd9!1.00!8.95!Hoxd9;;chr19:44831390..44831414,+!p1@Pax2!1.00!8.95!Pax2;;chr16:43363968..43364001,+!p7@Zbtb20!0.99!16.33!Zbtb20;;chr10:102491405..102491416,-!p1@Alx1!0.99!8.79!Alx1;;chr4:120488308..120488366,-!p1@Nfyc!0.98!50.24!Nfyc;;chr10:50614546..50614568,+!p@chr10:50614546..50614568,+!0.98!8.63!Sim1;;chr8:118231705..118231722,-!p3@Maf!0.97!68.29!Maf;;chr1:137155026..137155042,-!p1@Elf3!0.97!49.45!Elf3;;chr19:28754692..28754757,-!p1@Glis3!0.97!35.80!Glis3;;chr16:94085471..94085495,+!p1@Sim2!0.97!8.32!Sim2;;chr2:74542918..74542971,+!p1@Hoxd8!0.96!12.56!Hoxd8;;chr2:9800207..9800234,-!p1@Gata3!0.95!24.96!Gata3;;chr2:74529998..74530020,+!p2@Hoxd10!0.95!7.85!Hoxd10;;chr2:103123925..103123959,-!p3@Ehf!0.95!7.85!Ehf;;chr16:43363152..43363186,+!p3@Zbtb20!0.93!17.58!Zbtb20;;chr2:104966766..104966786,+!p1@Wt1!0.91!11.62!Wt1;;chr3:3508024..3508069,+!p2@Hnf4g!0.91!7.22!Hnf4g;;chr11:83666422..83666446,+!p4@Hnf1b!0.91!7.22!Hnf1b;;chr2:163372869..163372882,+!p3@Hnf4a!0.91!7.06!Hnf4a;;chr16:4594740..4594759,+!p1@Glis2!0.89!81.33!Glis2;;chr3:30408603..30408668,-!p1@Mecom!0.88!15.70!Mecom;;chr15:102828642..102828653,+!p2@Hoxc6!0.88!6.59!Hoxc6;;chr13:72101161..72101177,-!p2@Irx1!0.87!9.11!Irx1;;chr12:87702062..87702081,+!p4@Esrrb!0.87!6.44!Esrrb;;chr6:52184901..52184959,-!p2@Hoxa10!0.87!6.44!Hoxa10;;chr10:30491648..30491657,-!p15@Ncoa7!0.87!6.44!Ncoa7;;chr1:57029281..57029326,-!p1@Satb2!0.86!10.05!Satb2;;chr16:43247391..43247422,+!p12@Zbtb20!0.86!6.28!Zbtb20;;chr11:96145450..96145517,+!p2@Hoxb7!0.85!9.42!Hoxb7;;chr6:52167459..52167492,-!p1@Hoxa7!0.85!7.38!Hoxa7;;chr19:59532915..59532940,+!p5@Emx2!0.85!6.12!Emx2;;chr15:85566184..85566238,+!p1@Ppara!0.83!8.95!Ppara;;chr15:85602581..85602598,+!p8@Ppara!0.83!5.81!Ppara;;chr2:74543103..74543135,+!p4@Hoxd8!0.83!5.81!Hoxd8;;chr8:118231723..118231740,-!p1@Maf!0.82!134.70!Maf;;chr4:107107224..107107259,+!p2@Glis1!0.82!5.65!Glis1;;chr6:38097421..38097440,-!p7@D630045J12Rik!0.82!5.65!D630045J12Rik;;chr16:38294860..38294924,-!p1@Nr1i2!0.81!5.49!Nr1i2;;chr2:74542589..74542602,+!p8@Hoxd8!0.81!5.49!Hoxd8;;chr11:83665637..83665671,+!p6@Hnf1b!0.81!5.49!Hnf1b;;chr2:164829847..164829859,-!p5@Ncoa5!0.80!5.34!Ncoa5;;chr8:79426176..79426275,+!p1@Nr3c2!0.79!27.79!Nr3c2;;chr11:96160426..96160443,+!p2@Hoxb6!0.79!5.18!Hoxb6;;chr16:43363190..43363242,+!p2@Zbtb20!0.78!16.48!Zbtb20;;chr3:29912058..29912071,-!p6@Mecom!0.77!5.65!Mecom;;chr2:74549945..74549965,+!p4@Hoxd3!0.77!4.87!Hoxd3;;chr6:52190668..52190682,-!p3@Hoxa10!0.77!4.87!Hoxa10;;chr11:98636531..98636559,-!p1@Nr1d1!0.76!29.83!Nr1d1;;chr6:85137505..85137517,+!p2@Emx1!0.76!4.71!Emx1;;chr6:52195763..52195792,-!p2@Hoxa11!0.76!4.71!Hoxa11;;chr15:35225845..35225867,+!p1@Osr2!0.75!12.40!Osr2;;chr10:30375579..30375616,-!p3@Ncoa7!0.75!11.77!Ncoa7;;chr6:90412582..90412601,+!p1@Klf15!0.74!23.24!Klf15;;chr2:160698288..160698358,-!p3@Zhx3!0.74!15.23!Zhx3;;chr8:94325321..94325366,-!p1@Irx3!0.74!11.77!Irx3;;chr19:28754600..28754612,-!p2@Glis3!0.74!7.54!Glis3;;chr1:42752654..42752665,+!p@chr1:42752654..42752665,+!0.74!4.55!Pou3f3;;chr2:9809357..9809371,-!p2@Gata3!0.74!4.55!Gata3;;chr11:96143962..96144035,+!p2@Hoxb8!0.74!4.55!Hoxb8;;chr14:22807107..22807119,-!p2@Zfp503!0.73!20.88!Zfp503;;chr14:17407878..17407926,-!p1@Rarb!0.73!10.68!Rarb;;chr13:72766279..72766296,+!p2@Irx2!0.73!6.75!Irx2;;chr11:98614335..98614349,+!p8@Thra!0.73!4.40!Thra;;chr2:74542882..74542894,+!p10@Hoxd8!0.73!4.40!Hoxd8;;chr2:74535796..74535808,+!p3@Hoxd9!0.73!4.40!Hoxd9;;chr11:90252223..90252240,-!p1@Hlf!0.72!39.56!Hlf;;chr11:85646303..85646329,+!p1@Tbx2!0.72!31.56!Tbx2;;chr11:85646469..85646488,+!p5@Tbx2!0.72!6.59!Tbx2;;chr6:52167513..52167549,-!p2@Hoxa7!0.72!6.28!Hoxa7;;chr16:43236133..43236154,+!p17@Zbtb20!0.72!5.02!Zbtb20;;chr11:83664334..83664353,+!p2@Hnf1b!0.72!4.24!Hnf1b;;chr10:102491237..102491291,-!p2@Alx1!0.72!4.24!Alx1;;chr6:85137491..85137504,+!p3@Emx1!0.71!4.08!Emx1;;chr1:189432857..189432870,+!p7@Esrrg!0.71!4.08!Esrrg;;chr2:103264213..103264233,+!p1@Elf5!0.71!4.08!Elf5;;chr2:74517742..74517758,+!p2@Hoxd11!0.71!4.08!Hoxd11;;chr17:87153240..87153254,+!p1@Epas1!0.70!89.02!Epas1;;chr16:43619101..43619151,+!p6@Zbtb20!0.70!10.52!Zbtb20;;chr8:94325814..94325839,-!p2@Irx3!0.69!8.95!Irx3;;chr10:5734907..5734920,-!p11@Esr1!0.69!3.92!Esr1;;chr2:103252231..103252256,+!p4@Elf5!0.69!3.92!Elf5;;chr11:100800641..100800669,-!p3@Stat3!0.68!7.06!Stat3;;chr11:96213288..96213332,+!p@chr11:96213288..96213332,+!0.68!6.91!Hoxb2;;chr14:22807216..22807231,-!p3@Zfp503!0.68!6.91!Zfp503;;chr15:85566051..85566080,+!p4@Ppara!0.68!4.55!Ppara;;chr6:38097369..38097379,-!p11@D630045J12Rik!0.68!3.77!D630045J12Rik;;chr3:98186461..98186476,+!p2@Zfp697!0.68!3.77!Zfp697;;chr11:96143843..96143868,+!p3@Hoxb8!0.68!3.77!Hoxb8;;chr11:90250894..90250916,-!p5@Hlf!0.68!3.77!Hlf;;chr7:77511234..77511302,-!p2@Nr2f2!0.67!28.26!Nr2f2;;chr13:31650185..31650201,+!p1@Foxq1!0.67!14.44!Foxq1;;chr13:72766250..72766273,+!p1@Irx2!0.67!6.12!Irx2;;chr14:22808697..22808715,-!p4@Zfp503!0.67!4.40!Zfp503;;chr11:121380640..121380655,-!p1@Zfp750!0.66!6.28!Zfp750;;chr13:96093557..96093561,+!p6@Zbed3!0.66!3.61!Zbed3;;chr3:3508005..3508021,+!p3@Hnf4g!0.66!3.61!Hnf4g;;chr2:74560109..74560131,+!p1@Hoxd4!0.66!3.61!Hoxd4;;chr16:43619057..43619078,+!p8@Zbtb20!0.65!7.85!Zbtb20;;chr9:106355684..106355744,+!p5@Pcbp4!0.65!5.65!Pcbp4;;chr6:52176144..52176161,-!p2@Hoxa9!0.65!3.45!Hoxa9;;chr1:120524563..120524591,+!p2@Tfcp2l1!0.65!3.45!Tfcp2l1;;chr14:22807083..22807104,-!p1@Zfp503!0.64!69.08!Zfp503;;chr4:148275237..148275311,+!p2@Casz1!0.63!15.70!Casz1;;chr11:90250944..90250982,-!p2@Hlf!0.63!5.97!Hlf;;chr2:91035254..91035271,-!p3@Nr1h3!0.63!4.24!Nr1h3;;chr13:72101141..72101158,-!p3@Irx1!0.63!4.24!Irx1;;chr11:100800621..100800633,-!p5@Stat3!0.63!3.92!Stat3;;chr2:74536050..74536065,+!p2@Hoxd9!0.63!3.30!Hoxd9;;chr4:133109285..133109308,+!p1@Nr0b2!0.63!3.30!Nr0b2;;chr15:81633165..81633188,+!p2@Tef!0.62!30.93!Tef;;chr17:87153028..87153049,+!p2@Epas1!0.61!75.52!Epas1;;chr11:85646341..85646352,+!p3@Tbx2!0.61!6.75!Tbx2;;chr19:25746898..25746910,+!p1@Dmrt2!0.61!4.87!Dmrt2;;chr3:30408384..30408431,-!p4@Mecom!0.61!4.08!Mecom;;chr14:18493386..18493464,+!p1@Thrb!0.60!13.34!Thrb;;chr16:43363837..43363842,+!p11@Zbtb20!0.60!6.12!Zbtb20;;chr2:74543235..74543246,+!p7@Hoxd8!0.60!2.98!Hoxd8;;chr7:119885539..119885574,+!p3@Tead1!0.60!2.98!Tead1;;chr6:52190858..52190873,-!p4@Hoxa10!0.60!2.98!Hoxa10;;chr11:96690797..96690813,-!p1@Nfe2l1!0.59!67.98!Nfe2l1;;chr2:152758901..152758925,-!p1@Foxs1!0.59!15.07!Foxs1;;chr16:44173384..44173407,+!p2@Gm608!0.59!8.63!Gm608;;chr7:77511403..77511450,-!p3@Nr2f2!0.59!6.91!Nr2f2;;chr8:123640063..123640077,+!p1@Foxc2!0.59!5.81!Foxc2;;chr1:87546583..87546595,+!p1@Sp100!0.59!4.40!Sp100;;chr10:88996336..88996380,-!p2@Nr1h4!0.59!3.77!Nr1h4;;chr14:98568971..98569025,-!p1@Dach1!0.58!26.06!Dach1;;chr11:70043257..70043263,-!p1@Bcl6b!0.58!5.34!Bcl6b;;chr10:5734717..5734727,-!p12@Esr1!0.58!2.83!Esr1;;chr6:52167434..52167450,-!p3@Hoxa7!0.58!2.83!Hoxa7;;chr15:102797288..102797302,+!p1@Hoxc10!0.58!2.83!Hoxc10;;chr12:75002389..75002406,+!p4@Hif1a!0.58!2.83!Hif1a;;chr1:19199021..19199048,+!p8@Tfap2b!0.58!2.83!Tfap2b;;chr2:103143315..103143328,-!p2@Ehf!0.58!2.83!Ehf;;chr2:74542974..74542986,+!p5@Hoxd8!0.58!2.83!Hoxd8;;chr2:74550015..74550057,+!p2@Hoxd3!0.58!2.83!Hoxd3;;chr15:76709662..76709676,+!p2@Zfp7!0.57!6.44!Zfp7;;chr11:85646427..85646451,+!p4@Tbx2!0.57!5.34!Tbx2;;chr18:24178808..24178865,-!p2@Zfp191!0.56!17.43!Zfp191;;chr13:99124189..99124205,+!p1@Foxd1!0.56!4.40!Foxd1;;chr2:74517609..74517621,+!p3@Hoxd11!0.56!2.67!Hoxd11;;chr10:30522690..30522752,-!p2@Ncoa7!0.55!19.31!Ncoa7;;chr6:38204087..3820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ecom;;chr2:77357593..77357606,-!p6@Zfp385b!0.33!1.41!Zfp385b;;chr17:47873985..47874056,+!p1@Tfeb!0.32!15.07!Tfeb;;chr1:191994550..191994623,-!p1@Prox1!0.32!12.56!Prox1;;chr8:118230866..118230891,-!p4@Maf!0.32!11.77!Maf;;chr6:37392159..37392172,-!p2@Creb3l2!0.32!8.01!Creb3l2;;chr5:125538737..125538781,-!p2@Ncor2!0.32!6.12!Ncor2;;chr17:13897299..13897342,+!p3@Mllt4!0.32!3.61!Mllt4;;chr4:102787521..102787588,+!p4@Mier1!0.32!2.67!Mier1;;chr13:37918661..37918673,+!p17@Rreb1!0.32!1.41!Rreb1;;chr15:35225873..35225889,+!p2@Osr2!0.32!1.10!Osr2;;chr4:53792566..53792578,+!p1@Tal2!0.32!1.10!Tal2;;chr4:84192360..84192376,-!p8@Bnc2!0.32!1.10!Bnc2;;chr2:103264245..103264268,+!p2@Elf5!0.32!1.10!Elf5;;chr1:19199221..19199234,+!p6@Tfap2b!0.32!1.10!Tfap2b;;chr1:19199064..19199075,+!p10@Tfap2b!0.32!1.10!Tfap2b;;chr1:173144100..173144138,+!p2@Nr1i3!0.32!1.10!Nr1i3;;chr19:59534008..59534046,+!p7@Emx2!0.32!1.10!Emx2;;chr18:81183755..81183761,-!p1@Sall3!0.32!1.10!Sall3;;chr19:23215616..23215627,+!p9@Klf9!0.32!1.10!Klf9;;chr16:43235969..43235989,+!p20@Zbtb20!0.32!1.10!Zbtb20;;chr10:30522660..30522671,-!p10@Ncoa7!0.32!1.10!Ncoa7;;chr6:38097441..38097447,-!p13@D630045J12Rik!0.32!1.10!D630045J12Rik;;chr5:115420882..115420896,-!p3@Hnf1a!0.32!1.10!Hnf1a;;chr2:75542527..75542590,-!p1@Nfe2l2!0.31!166.42!Nfe2l2;;chr3:152059628..152059666,+!p2@Gm8261,p2@Zzz3!0.31!15.54!Zzz3;;chr17:71199121..71199165,-!p2@Tgif1!0.31!12.56!Tgif1;;chr6:38204109..38204155,-!p1@D630045J12Rik!0.31!9.26!D630045J12Rik;;chr16:44173352..44173383,+!p1@Gm608!0.31!8.63!Gm608;;chr17:15701286..15701323,-!p1@Prdm9!0.31!6.59!Prdm9;;chr7:91558392..91558434,-!p1@Arnt2!0.31!4.40!Arnt2;;chr15:57526316..57526332,+!p4@Zhx2!0.31!3.61!Zhx2;;chr4:62626682..62626705,+!p2@Zfp618!0.31!3.45!Zfp618;;chr9:96653241..96653288,-!p1@E030011O05Rik,p5@Zbtb38!0.31!2.67!Zbtb38;;chr18:76219118..76219155,+!p1@Zbtb7c!0.31!2.51!Zbtb7c;;chr2:165818125..165818167,+!p1@Ncoa3!0.30!47.26!Ncoa3;;chr2:160698721..160698745,-!p1@Zhx3!0.30!25.59!Zhx3;;chr5:104183173..104183207,+!p1@Aff1!0.30!23.55!Aff1;;chr4:62626594..62626651,+!p1@Zfp618!0.30!6.12!Zfp618;;chr14:79881330..79881415,+!p3@Elf1!0.30!5.34!Elf1;;chr15:10400245..10400282,-!p2@Dnajc21!0.30!5.34!Dnajc21;;chr18:75979866..75979890,+!p3@Zbtb7c!0.30!2.98!Zbtb7c;;chr1:133914326..133914346,+!p8@Elk4!0.30!2.51!Elk4;;chr4:45024818..45024846,-!p4@Zbtb5!0.30!2.51!Zbtb5;;chr15:50721211..50721234,-!p6@Trps1!0.30!2.20!Trps1;;chr7:52963269..52963305,+!p4@Dbp!0.30!1.73!Dbp;;chr19:5560600..5560617,-!p1@Ovol1!0.30!1.41!Ovol1;;chr6:52663725..52663794,+!p1@Tax1bp1!0.29!263.29!Tax1bp1;;chr2:166888107..166888224,-!p1@Znfx1!0.29!25.28!Znfx1;;chr7:120351014..120351109,+!p1@Arntl!0.29!23.86!Arntl;;chr13:44826694..44826710,+!p3@Jarid2!0.29!18.84!Jarid2;;chr17:34730333..34730362,+!p2@Pbx2!0.29!6.28!Pbx2;;chr7:134169741..134169760,-!p10@Maz!0.29!4.55!Maz;;chr2:115891454..115891471,-!p3@Meis2!0.29!4.55!Meis2;;chr2:165818108..165818119,+!p2@Ncoa3!0.29!3.77!Ncoa3;;chr1:52176406..52176433,+!p2@Stat1!0.29!3.61!Stat1;;chr4:97439519..97439539,+!p11@Nfia!0.29!2.98!Nfia;;chr8:94881733..94881790,+!p1@Irx5!0.29!2.67!Irx5;;chr7:25917492..25917512,-!p1@Pou2f2!0.29!2.20!Pou2f2;;chr9:69137709..69137714,+!p7@Rora!0.29!1.41!Rora;;chr8:94325273..94325288,-!p5@Irx3!0.29!1.41!Irx3;;chr11:96213264..96213282,+!p@chr11:96213264..96213282,+!0.29!1.41!Hoxb2;;chr2:180069370..180069409,-!p1@Gata5!0.29!1.26!Gata5;;chr2:105003277..105003280,+!p5@Wt1!0.29!0.94!Wt1;;chr2:74536003..74536008,+!p7@Hoxd9!0.29!0.94!Hoxd9;;chr14:17408022..17408043,-!p6@Rarb!0.29!0.94!Rarb;;chr12:87762617..87762622,+!p13@Esrrb!0.29!0.94!Esrrb;;chr13:40825465..40825469,-!p2@Tfap2a!0.29!0.94!Tfap2a;;chr12:75002335..75002352,+!p7@Hif1a!0.29!0.94!Hif1a;;chr15:85602655..85602680,+!p5@Ppara!0.29!0.94!Ppara;;chr11:96164821..96164865,+!p1@Hoxb5!0.29!0.94!Hoxb5;;chr6:38097449..38097457,-!p16@D630045J12Rik!0.29!0.94!D630045J12Rik;;chr5:120130377..120130432,+!p10@Tbx3!0.29!0.94!Tbx3;;chr7:25917459..25917474,-!p2@Pou2f2!0.29!0.94!Pou2f2;;chr7:77511928..77511937,-!p12@Nr2f2!0.29!0.94!Nr2f2;;chr1:181476358..181476391,-!p1@Tfb2m!0.28!26.38!Tfb2m;;chr5:134790548..134790591,-!p3@Gtf2i!0.28!18.84!Gtf2i;;chr14:55482892..55482988,-!p1@Homez!0.28!11.15!Homez;;chr19:26679596..26679607,+!p8@Smarca2!0.28!2.83!Smarca2;;chr5:147760297..147760304,+!p4@Gtf3a!0.28!2.35!Gtf3a;;chr5:92391948..92391968,+!p3@Thap6!0.28!1.88!Thap6;;chr10:127176667..127176679,+!p2@Zbtb39!0.28!1.88!Zbtb39;;chr1:4486530..4486557,-!p4@Sox17!0.28!1.41!Sox17;;chr6:52664406..52664434,+!p3@Tax1bp1!0.28!1.26!Tax1bp1;;chr6:37392095..37392154,-!p1@Creb3l2!0.27!52.44!Creb3l2;;chr15:36937137..36937157,-!p2@Gm10193,p2@Zfp706!0.27!50.87!Zfp706;;chr5:67698180..67698216,+!p1@Slc30a9!0.27!43.80!Slc30a9;;chr5:137043177..137043190,-!p2@Cux1!0.27!13.34!Cux1;;chr3:95021612..95021650,-!p2@Gabpb2!0.27!7.85!Gabpb2;;chr5:9160908..9160912,-!p2@Dmtf1!0.27!6.28!Dmtf1;;chr2:44968721..44968734,-!p6@Zeb2!0.27!5.65!Zeb2;;chr11:96690779..96690790,-!p3@Nfe2l1!0.27!3.30!Nfe2l1;;chr6:39068181..39068206,-!p3@Parp12!0.27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| ||
|ffid_belonging_in_development=UBERON:0003104,UBERON:0003918,UBERON:0007687,FF:0000294 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 36: | Line 42: | ||
|has_quality= | |has_quality= | ||
|id=FF:1353-25F3 | |id=FF:1353-25F3 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011482 | ||
|is_obsolete= | |||
|library_id=CNhs11122 | |||
|library_id_phase_based=2:CNhs11122 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;1353 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;1353 | |||
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/kidney%252c%2520neonate%2520N25.CNhs11122.1353-25F3.mm10.nobarcode.bam | |||
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/kidney%252c%2520neonate%2520N25.CNhs11122.1353-25F3.mm10.nobarcode.ctss.bed.gz | |||
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/kidney%252c%2520neonate%2520N25.CNhs11122.1353-25F3.mm9.nobarcode.bam | |||
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/kidney%252c%2520neonate%2520N25.CNhs11122.1353-25F3.mm9.ctss.bed.gz | |||
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/kidney%252c%2520neonate%2520N25.CNhs11122.1353-25F3.mm9.nobarcode.rdna.fa.gz | |||
|name=kidney, neonate N25 | |name=kidney, neonate N25 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11122,LSID734,release008,COMPLETED | |profile_hcage=CNhs11122,LSID734,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|repeat_enrich_byfamily=0.699719205139173,0.0311096316228697,0.0247766929008436,0,0,0.0633328814307688,0.55612632832998,0,0.0316664407153844,0,0,-0.0843392403965415,0,0,0,0,0,0,0.312982689859057,0,0,0,0,0.0422092184599547,0.0633328814307688,0,0,0,0,0,0,0,0.209990376633196,0,0.914974381383991,0,1.09554965935881,0,0.0423139473544717,-0.022916821438831,-0.132822085117989,-0.816599820518864,-0.0582155949321922,0,0,0.167611545958962,0,0,0,0,0,0,0,0.118594524292246,0,0.256005048499426,0,0,0,0,0.118594524292246,0,0.204965486776856,0,0.0633328814307688,0.0472191249198448,0.0059140107525925,0.194225383402246,0.22446421845182,0.0866443079427335,0.0633328814307688,0.110559707099912,-0.00895929169740983,0.118594524292246,0.118594524292246,0,0,-0.10181810960796,-0.0910388399989378,0.132821448238252,0,0,0,0,0.059297262146123,0.409930973553713,-0.0940408059574807,-0.117616467284638,-0.0249919312204851,0,0.969459366449707,0,0,0.0316664407153844 | |||
|rna_box=25 | |rna_box=25 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 57: | Line 76: | ||
|rna_weight_ug= | |rna_weight_ug= | ||
|sample_age= | |sample_age= | ||
|sample_category=developmental | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 76: | Line 96: | ||
|sample_tissue=kidney | |sample_tissue=kidney | ||
|top_motifs=ESRRA:2.91605184356;HNF1A:2.49302140439;NFIX:2.29500236503;SREBF1,2:2.29265299777;HNF4A_NR2F1,2:1.73884626637;FOXQ1:1.70520388454;TEF:1.66649316622;BPTF:1.66000539201;AR:1.40492822011;RXR{A,B,G}:1.40474146728;NR5A1,2:1.39708082684;NKX3-1:1.36761152064;T:1.31583673916;NFIL3:1.24051518655;FOXN1:1.13817098513;FOX{D1,D2}:1.08361406683;FOX{I1,J2}:1.07977533957;ONECUT1,2:1.06055308304;FOXP1:1.033886218;ZBTB16:0.992378074084;ADNP_IRX_SIX_ZHX:0.970133650372;PAX5:0.948360071552;NR1H4:0.948284598553;FOXO1,3,4:0.935292200082;NR6A1:0.923957643549;SNAI1..3:0.878775594709;TEAD1:0.87332326887;TP53:0.771834776456;TFCP2:0.764383075789;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.690687299755;NANOG{mouse}:0.675473118319;GTF2A1,2:0.629467620917;SP1:0.622138143369;NFE2:0.595479284167;TLX1..3_NFIC{dimer}:0.553694654174;PRRX1,2:0.526053100101;PAX6:0.477629008819;IRF1,2:0.46253895825;STAT1,3:0.462124471412;PITX1..3:0.460710271594;SOX5:0.423628766812;ESR1:0.402543214872;IKZF2:0.4017353295;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.392470474868;MYBL2:0.384173539221;EVI1:0.376755099838;NKX2-3_NKX2-5:0.360011333214;RXRA_VDR{dimer}:0.352404188867;ZEB1:0.34519819203;XCPE1{core}:0.320398344316;ARID5B:0.31441255725;FOXD3:0.272421092237;TFAP2{A,C}:0.248474427982;DMAP1_NCOR{1,2}_SMARC:0.243255485144;NFATC1..3:0.231841675949;PPARG:0.212869594738;TOPORS:0.183124227259;PBX1:0.167980117104;ELF1,2,4:0.139097169539;GCM1,2:0.134415421845;FOXA2:0.0990018581138;NKX6-1,2:0.0789774883116;NFE2L2:0.0626538529851;MYOD1:0.0536821114518;bHLH_family:0.0532801758784;ZNF384:0.0441644272446;GTF2I:0.0390394429956;POU6F1:0.0279018142935;PAX2:0.0182027276195;EBF1:0.0163781079369;GFI1:-0.0112942202104;TFAP4:-0.0124421836616;STAT2,4,6:-0.0412228630307;CDX1,2,4:-0.0558495180566;CEBPA,B_DDIT3:-0.0625406934418;ZBTB6:-0.0708360143144;MAZ:-0.0796752502823;AIRE:-0.102141482469;VSX1,2:-0.102859305895;FOSL2:-0.106345298178;GZF1:-0.10788434807;HBP1_HMGB_SSRP1_UBTF:-0.112599241369;NKX2-1,4:-0.1177419299;IKZF1:-0.119492737823;YY1:-0.151189665345;HIC1:-0.188797075154;IRF7:-0.199575343045;HAND1,2:-0.205971531901;DBP:-0.214611395475;GFI1B:-0.219955138527;NFKB1_REL_RELA:-0.225638334759;FOXM1:-0.230043913503;ZNF143:-0.23083214308;FOXP3:-0.256125192193;ATF4:-0.259236161329;CUX2:-0.266111253382;SPIB:-0.283141628732;KLF4:-0.2886327886;ETS1,2:-0.291515807336;NFY{A,B,C}:-0.30068553875;PAX4:-0.305503675343;ELK1,4_GABP{A,B1}:-0.320422681993;HOX{A5,B5}:-0.331763294058;NRF1:-0.348934845934;RFX1:-0.35376002001;PATZ1:-0.368190491409;TFAP2B:-0.37857706297;PDX1:-0.382929650215;MEF2{A,B,C,D}:-0.390835836286;HMGA1,2:-0.412985416115;HSF1,2:-0.416686678123;RBPJ:-0.423956824561;SRF:-0.450172845132;TGIF1:-0.454868654263;CDC5L:-0.457406160351;MED-1{core}:-0.461105018004;TBX4,5:-0.497621736336;RREB1:-0.497837860782;ZNF238:-0.505158202745;PRDM1:-0.506349865281;ZFP161:-0.510659689997;HIF1A:-0.532808846822;SPI1:-0.532839831657;MYFfamily:-0.552628092433;MAFB:-0.555203248417;REST:-0.5859200239;BACH2:-0.603296807093;BREu{core}:-0.624223600765;UFEwm:-0.624446472322;POU5F1:-0.645347241139;STAT5{A,B}:-0.645371911521;MTF1:-0.656249218777;LMO2:-0.665095588404;RUNX1..3:-0.681933206992;MZF1:-0.68750045092;HOXA9_MEIS1:-0.701313073992;GATA4:-0.702655736861;CREB1:-0.704084804334;MTE{core}:-0.708694836441;PAX1,9:-0.73534682905;TBP:-0.751753736858;MYB:-0.757916559612;SOX2:-0.75999211689;NKX3-2:-0.762027725846;RORA:-0.767791719021;ATF5_CREB3:-0.774284391679;ATF2:-0.79896498887;CRX:-0.801754022906;LEF1_TCF7_TCF7L1,2:-0.802992555231;GATA6:-0.829888655799;RFX2..5_RFXANK_RFXAP:-0.848361819872;AHR_ARNT_ARNT2:-0.850887833838;ZNF423:-0.865816546016;EP300:-0.907643785579;POU1F1:-0.909635707988;SOX{8,9,10}:-0.937016213437;FOS_FOS{B,L1}_JUN{B,D}:-0.943929621691;NHLH1,2:-0.953727282402;POU3F1..4:-1.00891560979;LHX3,4:-1.00995364481;NR3C1:-1.01371134651;E2F1..5:-1.02097506309;EGR1..3:-1.03515254333;HLF:-1.05463703779;OCT4_SOX2{dimer}:-1.08055582053;NFE2L1:-1.14793366332;POU2F1..3:-1.15021568793;ALX1:-1.17829817574;TFDP1:-1.19423696226;ATF6:-1.23728067084;SPZ1:-1.2397183844;JUN:-1.2589328139;ALX4:-1.27138926592;EN1,2:-1.28794946421;PAX8:-1.30995716186;GLI1..3:-1.3204263294;SOX17:-1.34104090331;HMX1:-1.3458694077;TLX2:-1.43137677472;SMAD1..7,9:-1.43645187207;FOX{F1,F2,J1}:-1.44446529613;FOXL1:-1.55118601453;TAL1_TCF{3,4,12}:-1.58431913443;NANOG:-1.59738840432;ZIC1..3:-1.63306964136;HES1:-1.68872351811;HOX{A4,D4}:-1.87802115419;NKX2-2,8:-1.96307364729;ZNF148:-2.41159506993 | |top_motifs=ESRRA:2.91605184356;HNF1A:2.49302140439;NFIX:2.29500236503;SREBF1,2:2.29265299777;HNF4A_NR2F1,2:1.73884626637;FOXQ1:1.70520388454;TEF:1.66649316622;BPTF:1.66000539201;AR:1.40492822011;RXR{A,B,G}:1.40474146728;NR5A1,2:1.39708082684;NKX3-1:1.36761152064;T:1.31583673916;NFIL3:1.24051518655;FOXN1:1.13817098513;FOX{D1,D2}:1.08361406683;FOX{I1,J2}:1.07977533957;ONECUT1,2:1.06055308304;FOXP1:1.033886218;ZBTB16:0.992378074084;ADNP_IRX_SIX_ZHX:0.970133650372;PAX5:0.948360071552;NR1H4:0.948284598553;FOXO1,3,4:0.935292200082;NR6A1:0.923957643549;SNAI1..3:0.878775594709;TEAD1:0.87332326887;TP53:0.771834776456;TFCP2:0.764383075789;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.690687299755;NANOG{mouse}:0.675473118319;GTF2A1,2:0.629467620917;SP1:0.622138143369;NFE2:0.595479284167;TLX1..3_NFIC{dimer}:0.553694654174;PRRX1,2:0.526053100101;PAX6:0.477629008819;IRF1,2:0.46253895825;STAT1,3:0.462124471412;PITX1..3:0.460710271594;SOX5:0.423628766812;ESR1:0.402543214872;IKZF2:0.4017353295;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.392470474868;MYBL2:0.384173539221;EVI1:0.376755099838;NKX2-3_NKX2-5:0.360011333214;RXRA_VDR{dimer}:0.352404188867;ZEB1:0.34519819203;XCPE1{core}:0.320398344316;ARID5B:0.31441255725;FOXD3:0.272421092237;TFAP2{A,C}:0.248474427982;DMAP1_NCOR{1,2}_SMARC:0.243255485144;NFATC1..3:0.231841675949;PPARG:0.212869594738;TOPORS:0.183124227259;PBX1:0.167980117104;ELF1,2,4:0.139097169539;GCM1,2:0.134415421845;FOXA2:0.0990018581138;NKX6-1,2:0.0789774883116;NFE2L2:0.0626538529851;MYOD1:0.0536821114518;bHLH_family:0.0532801758784;ZNF384:0.0441644272446;GTF2I:0.0390394429956;POU6F1:0.0279018142935;PAX2:0.0182027276195;EBF1:0.0163781079369;GFI1:-0.0112942202104;TFAP4:-0.0124421836616;STAT2,4,6:-0.0412228630307;CDX1,2,4:-0.0558495180566;CEBPA,B_DDIT3:-0.0625406934418;ZBTB6:-0.0708360143144;MAZ:-0.0796752502823;AIRE:-0.102141482469;VSX1,2:-0.102859305895;FOSL2:-0.106345298178;GZF1:-0.10788434807;HBP1_HMGB_SSRP1_UBTF:-0.112599241369;NKX2-1,4:-0.1177419299;IKZF1:-0.119492737823;YY1:-0.151189665345;HIC1:-0.188797075154;IRF7:-0.199575343045;HAND1,2:-0.205971531901;DBP:-0.214611395475;GFI1B:-0.219955138527;NFKB1_REL_RELA:-0.225638334759;FOXM1:-0.230043913503;ZNF143:-0.23083214308;FOXP3:-0.256125192193;ATF4:-0.259236161329;CUX2:-0.266111253382;SPIB:-0.283141628732;KLF4:-0.2886327886;ETS1,2:-0.291515807336;NFY{A,B,C}:-0.30068553875;PAX4:-0.305503675343;ELK1,4_GABP{A,B1}:-0.320422681993;HOX{A5,B5}:-0.331763294058;NRF1:-0.348934845934;RFX1:-0.35376002001;PATZ1:-0.368190491409;TFAP2B:-0.37857706297;PDX1:-0.382929650215;MEF2{A,B,C,D}:-0.390835836286;HMGA1,2:-0.412985416115;HSF1,2:-0.416686678123;RBPJ:-0.423956824561;SRF:-0.450172845132;TGIF1:-0.454868654263;CDC5L:-0.457406160351;MED-1{core}:-0.461105018004;TBX4,5:-0.497621736336;RREB1:-0.497837860782;ZNF238:-0.505158202745;PRDM1:-0.506349865281;ZFP161:-0.510659689997;HIF1A:-0.532808846822;SPI1:-0.532839831657;MYFfamily:-0.552628092433;MAFB:-0.555203248417;REST:-0.5859200239;BACH2:-0.603296807093;BREu{core}:-0.624223600765;UFEwm:-0.624446472322;POU5F1:-0.645347241139;STAT5{A,B}:-0.645371911521;MTF1:-0.656249218777;LMO2:-0.665095588404;RUNX1..3:-0.681933206992;MZF1:-0.68750045092;HOXA9_MEIS1:-0.701313073992;GATA4:-0.702655736861;CREB1:-0.704084804334;MTE{core}:-0.708694836441;PAX1,9:-0.73534682905;TBP:-0.751753736858;MYB:-0.757916559612;SOX2:-0.75999211689;NKX3-2:-0.762027725846;RORA:-0.767791719021;ATF5_CREB3:-0.774284391679;ATF2:-0.79896498887;CRX:-0.801754022906;LEF1_TCF7_TCF7L1,2:-0.802992555231;GATA6:-0.829888655799;RFX2..5_RFXANK_RFXAP:-0.848361819872;AHR_ARNT_ARNT2:-0.850887833838;ZNF423:-0.865816546016;EP300:-0.907643785579;POU1F1:-0.909635707988;SOX{8,9,10}:-0.937016213437;FOS_FOS{B,L1}_JUN{B,D}:-0.943929621691;NHLH1,2:-0.953727282402;POU3F1..4:-1.00891560979;LHX3,4:-1.00995364481;NR3C1:-1.01371134651;E2F1..5:-1.02097506309;EGR1..3:-1.03515254333;HLF:-1.05463703779;OCT4_SOX2{dimer}:-1.08055582053;NFE2L1:-1.14793366332;POU2F1..3:-1.15021568793;ALX1:-1.17829817574;TFDP1:-1.19423696226;ATF6:-1.23728067084;SPZ1:-1.2397183844;JUN:-1.2589328139;ALX4:-1.27138926592;EN1,2:-1.28794946421;PAX8:-1.30995716186;GLI1..3:-1.3204263294;SOX17:-1.34104090331;HMX1:-1.3458694077;TLX2:-1.43137677472;SMAD1..7,9:-1.43645187207;FOX{F1,F2,J1}:-1.44446529613;FOXL1:-1.55118601453;TAL1_TCF{3,4,12}:-1.58431913443;NANOG:-1.59738840432;ZIC1..3:-1.63306964136;HES1:-1.68872351811;HOX{A4,D4}:-1.87802115419;NKX2-2,8:-1.96307364729;ZNF148:-2.41159506993 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:1353-25F3;search_select_hide=table117:1353-25F3 | |||
}} | }} |
Latest revision as of 19:01, 4 June 2020
Name: | kidney, neonate N25 |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs11122 |
Sample type: | developmental |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
ExpandAdditional information |
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ExpandCAGE Accession numbers |
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ExpandDownload raw sequence, BAM & CTSS |
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs11122
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11122
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11122
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11122
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0002113 (kidney)
0002100 (trunk)
0000479 (tissue)
0000062 (organ)
0000475 (organism subdivision)
0006554 (urinary system structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0009569 (subdivision of trunk)
0000489 (cavitated compound organ)
0005177 (trunk region element)
0005172 (abdomen element)
0005173 (abdominal segment element)
0011143 (upper urinary tract)
0001008 (renal system)
0002417 (abdominal segment of trunk)
0000916 (abdomen)
FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000309 (mouse neonate N25 sample)
0011482 (mouse kidney- neonate N25 sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0003104 (mesenchyme)
UBERON:0003918 (kidney mesenchyme)
UBERON:0007687 (kidney field)
FF:0000294 (mouse embryonic day 11 sample)