FFCP PHASE1:Hg19::chr17:7166539..7166545,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:7166539..7166545,-
|short_description=p5@CLDN7
|description=CAGE_peak_5_at_CLDN7_5end
|association_with_transcript=-27bp_to_ENST00000360325,NM_001185022,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1366 | |EntrezGene=1366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2049 | |HGNC=2049 | ||
|TSSclassifier=strong | |||
|UniProt=O95471 | |UniProt=O95471 | ||
|association_with_transcript=-27bp_to_ENST00000360325,NM_001185022,uc002gfn.3_5end | |||
|cluster_id=chr17:7166539..7166545,- | |||
|description=CAGE_peak_5_at_CLDN7_5end | |||
|id=chr17:7166539..7166545,- | |||
|ontology_enrichment_celltype=CL:0000066!8.57e-25!254;CL:0002076!1.22e-10!43;CL:1000507!1.66e-08!12;CL:1000494!1.66e-08!12;CL:1000449!2.36e-08!16;CL:1000497!3.28e-08!18;CL:0002518!3.28e-08!18;CL:0000223!3.99e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.68e-20;10!CL:1000494;2.68e-20;10!CL:1000449;2.74e-17;15!CL:1000497;4.26e-15;17!CL:0002518;4.26e-15;17!CL:0002681;1.66e-12;12!CL:0002584;1.66e-12;12!CL:1000415;2.84e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.41e-20,10;CL:1000494,1.41e-20,10;CL:1000449,1.66e-17,15;CL:1000497,2.74e-15,17;CL:0002518,2.74e-15,17;CL:0000066,1.21e-14,253;CL:0002681,1.30e-12,12;CL:0002584,1.30e-12,12;CL:1000415,6.31e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.50e-10;29 | |||
|ontology_enrichment_disease=DOID:305!5.41e-14!106;DOID:0050687!2.05e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.71e-19!169;UBERON:0000925!1.71e-19!169;UBERON:0006595!1.71e-19!169;UBERON:0001007!6.65e-17!155;UBERON:0001555!6.65e-17!155;UBERON:0007026!6.65e-17!155;UBERON:0004921!2.39e-14!129;UBERON:0004185!2.39e-14!129;UBERON:0000065!1.81e-13!53;UBERON:0001004!2.79e-12!72;UBERON:0000072!9.06e-12!46;UBERON:0000464!2.03e-11!104;UBERON:0000077!3.47e-11!130;UBERON:0008947!4.35e-11!38;UBERON:0003258!4.35e-11!38;UBERON:0006554!8.53e-11!44;UBERON:0001008!2.36e-10!45;UBERON:0005177!4.76e-10!107;UBERON:0001737!1.02e-09!9;UBERON:0001041!2.87e-09!98;UBERON:0000058!3.95e-09!26;UBERON:0000466!7.75e-09!126;UBERON:0000063!8.01e-09!97;UBERON:0000064!8.92e-09!219;UBERON:0001557!1.59e-08!19;UBERON:0009773!1.66e-08!12;UBERON:0001231!1.66e-08!12;UBERON:0004810!1.66e-08!12;UBERON:0002113!1.68e-08!27;UBERON:0003918!1.68e-08!27;UBERON:0005095!1.68e-08!27;UBERON:0007687!1.68e-08!27;UBERON:0000080!1.84e-08!18;UBERON:0002120!1.84e-08!18;UBERON:0004875!1.84e-08!18;UBERON:0005721!1.84e-08!18;UBERON:0005754!1.84e-08!18;UBERON:0007297!1.84e-08!18;UBERON:0004876!2.08e-08!20;UBERON:0004211!2.36e-08!16;UBERON:0001285!2.36e-08!16;UBERON:0007684!2.36e-08!16;UBERON:0003220!2.36e-08!16;UBERON:0004208!2.36e-08!16;UBERON:0003104!4.31e-08!238;UBERON:0009142!4.31e-08!238;UBERON:0005178!8.20e-08!34;UBERON:0002224!8.20e-08!34;UBERON:0006555!1.25e-07!17;UBERON:0005103!1.25e-07!17;UBERON:0000083!1.25e-07!17;UBERON:0009201!1.25e-07!17;UBERON:0004819!1.25e-07!17;UBERON:0006553!1.25e-07!17;UBERON:0003074!1.25e-07!17;UBERON:0003060!1.25e-07!17;UBERON:0000481!1.38e-07!347;UBERON:0003887!1.79e-07!21;UBERON:0005181!2.07e-07!35;UBERON:0003064!3.39e-07!37;UBERON:0000489!5.13e-07!32;UBERON:0009569!8.72e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.68e-20;10!UBERON:0009773;2.68e-20;10!UBERON:0001231;2.68e-20;10!UBERON:0004810;2.68e-20;10!UBERON:0006555;2.74e-17;15!UBERON:0004819;2.74e-17;15!UBERON:0001285;2.74e-17;15!UBERON:0007684;2.74e-17;15!UBERON:0001737;4.66e-16;9!UBERON:0001557;4.66e-16;9!UBERON:0000353;3.31e-13;15!UBERON:0006554;1.50e-12;30!UBERON:0001008;1.50e-12;30!UBERON:0001225;1.66e-12;12!UBERON:0008987;1.66e-12;12!UBERON:0002113;2.63e-10;24!UBERON:0011143;2.63e-10;24!UBERON:0001851;7.13e-10;15!UBERON:0000072;1.75e-09;37!UBERON:0000065;2.18e-08;44!UBERON:0000489;2.64e-08;29!UBERON:0005409;2.86e-08;22!UBERON:0000160;4.07e-08;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.41e-20,10;UBERON:0004211,1.66e-17,15;UBERON:0009773,1.66e-17,15;UBERON:0001231,1.66e-17,15;UBERON:0001285,1.66e-17,15;UBERON:0007684,1.66e-17,15;UBERON:0004208,1.66e-17,15;UBERON:0006555,2.50e-16,16;UBERON:0004819,2.50e-16,16;UBERON:0001737,5.71e-16,9;UBERON:0000353,2.69e-13,15;UBERON:0001225,1.30e-12,12;UBERON:0008987,1.30e-12,12;UBERON:0002113,5.93e-12,26;UBERON:0003918,5.93e-12,26;UBERON:0011143,5.93e-12,26;UBERON:0005095,5.93e-12,26;UBERON:0007687,5.93e-12,26;UBERON:0004119,2.31e-11,160;UBERON:0000925,2.31e-11,160;UBERON:0006595,2.31e-11,160;UBERON:0008947,6.08e-11,38;UBERON:0003258,6.08e-11,38;UBERON:0006554,9.06e-11,47;UBERON:0004921,1.55e-10,118;UBERON:0001008,1.71e-10,48;UBERON:0001851,5.87e-10,15;UBERON:0000489,9.23e-10,31;UBERON:0001007,1.17e-09,145;UBERON:0001555,1.17e-09,145;UBERON:0007026,1.17e-09,145;UBERON:0005172,7.90e-09,54;UBERON:0005173,7.90e-09,54;UBERON:0000065,1.79e-08,54;UBERON:0000072,1.93e-08,47;UBERON:0005177,3.79e-08,101;UBERON:0000160,4.57e-08,17;UBERON:0009569,5.10e-08,112;UBERON:0002417,1.05e-07,60;UBERON:0000916,1.05e-07,60;UBERON:0001557,3.00e-07,19;UBERON:0005409,3.96e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,2.79120467188971,0.218441372130172,0.527533956456907,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0,0,0.550236083880135,1.46296476575767,0,0,0,0,0,0.488124115096339,1.47065232138347,0.81014194788176,0.17859945656816,0.22452937262617,0.788280363383256,0,0,0.732806975721629,0,0,0.436094052142534,0,0,0,0,0.709336764396714,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.860413786167011,0.487894824518382,0.662648841607426,0.813357600086629,0.310983165046111,0,0,0,0,0,0,1.44375896333917,0.946454400318751,0.842923450390509,1.68707720918437,1.10293972732394,1.08939722046203,1.42362371466658,1.8876383142423,1.17732879075208,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0.219500570817251,0,0.201057944823262,0.370353780634118,0.325808305310325,3.11980435583874,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0,0.966875596732978,0.601519410909855,1.93370076765382,0,0,0,3.15839729035188,1.15523005656622,1.56869953835371,2.92278449306521,0.949964660035881,0,0.340187410553031,0.431831832204279,0,0,2.00675909541941,1.78413391131527,1.66215201785745,0.447749509444357,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,0,1.11273558941105,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0.865999014529609,0.670302275535787,0,0.188287601553558,1.29151611801369,3.36942951335251,0,0.459446800413919,0,0,0,0,0,0,0.540031437238115,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0.222886768554957,0,0.71623345421307,0,0.307160702099232,0,0,0,0,0.422250816255987,0.796991953004279,0.552567831062295,0,0.102268682502155,0,0,0.0898683511473268,0.537063524026827,0,0,0,0,0,0,0,0,0.874599999961957,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0.230850775511391,0,0,0.269272933229316,0.54323685961004,0.638002319463839,0.457987967009312,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,3.98104772431402,2.21143911258348,1.83309043480088,0,0,0,0,0,0,0,0.586993856796269,0,2.76209081994573,0,0,0,0.150323419414493,0.103688191397247,0.664653872707185,0,0,0,0,1.10939738410511,0.173559738335131,0.195984794828755,0.174118413160805,0,3.95567874684718,0,0.0730893170861856,0,0.387956065953678,0,0,0,0,0,1.36885967914362,1.04206466326994,0.85381197895741,0.19980960958213,1.15272333723285,0,0.343189995723929,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.964518890790115,0.412618309791701,0.415440338029185,0,0,0,0,0.472834243795189,0.681909645754975,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,1.40963004463334,0.320362237703084,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0.463044948647668,0,0,0.617602894321944,0,0.176689145945881,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0.981392365535065,0,0.245772908753719,1.47918486351039,0,0,0,0,0,2.65771064666944,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.88332946650923,0,0.550285795565037,0.231051332300676,0,0,0,0,0,0,0.261906694481422,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,1.91643641459393,0,0.336283722218824,0,0,0.887023701626388,0,0,0,0,0.472775363535873,0.111231401892069,0.156986185701028,0,1.12108865325516,0.913158720509496,0.431855182437243,0,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,0.4582137370881,0,0,1.11855431797792,0.098150233615243,0.121917924982269,0,0,0,0,0.467878926924211,0,0,0.11294608203896,0,0.301925687133347,2.9326180081019,0.437119121007915,0,0,1.41405928260976,0,0,0,0,0.0939839179798536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| ||
|short_description=p5@CLDN7 | |||
}} | }} |
Latest revision as of 06:28, 17 September 2015
Short description: | p5@CLDN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CLDN7_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000360325, NM_001185022, uc002gfn.3_5end |
EntrezGene: | CLDN7 |
HGNC: | 2049 |
UniProt: | O95471 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.41e-20 | 10 |
nephron tubule epithelial cell | 1.41e-20 | 10 |
epithelial cell of nephron | 1.66e-17 | 15 |
kidney cell | 2.74e-15 | 17 |
kidney epithelial cell | 2.74e-15 | 17 |
epithelial cell | 1.21e-14 | 253 |
kidney cortical cell | 1.30e-12 | 12 |
renal cortical epithelial cell | 1.30e-12 | 12 |
epithelial cell of gall bladder | 6.31e-09 | 2 |