FFCP PHASE1:Hg19::chr17:72733377..72733403,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:72733377..72733403,+
|short_description=p1@RAB37
|description=CAGE_peak_1_at_RAB37_5end
|association_with_transcript=6bp_to_,-6bp_to_ENST00000392610,ENST0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=326624 | |EntrezGene=326624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30268 | |HGNC=30268 | ||
|TSSclassifier=strong | |||
|UniProt=A8MTC6 | |UniProt=A8MTC6 | ||
|association_with_transcript=6bp_to_,-6bp_to_ENST00000392610,ENST00000481224_5end | |||
|cluster_id=chr17:72733377..72733403,+ | |||
|coexpression_cluster_id=C3675 | |||
|description=CAGE_peak_1_at_RAB37_5end | |||
|id=chr17:72733377..72733403,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.18e-51!172;CL:0000566!5.18e-51!172;CL:0000988!2.15e-49!182;CL:0002032!2.83e-47!165;CL:0000837!2.83e-47!165;CL:0000738!7.20e-38!140;CL:0002031!1.13e-31!124;CL:0002087!1.29e-29!119;CL:0000763!1.57e-27!112;CL:0000049!1.57e-27!112;CL:0002057!1.19e-18!42;CL:0000766!1.53e-18!76;CL:0000838!2.02e-18!52;CL:0000542!1.09e-17!53;CL:0000051!1.09e-17!53;CL:0000860!3.27e-16!45;CL:0000839!1.16e-14!70;CL:0000084!1.82e-14!25;CL:0000827!1.82e-14!25;CL:0000557!1.48e-13!71;CL:0000791!5.94e-13!18;CL:0000789!5.94e-13!18;CL:0002420!5.94e-13!18;CL:0002419!5.94e-13!18;CL:0000790!5.94e-13!18;CL:0002194!4.65e-11!63;CL:0000576!4.65e-11!63;CL:0000040!4.65e-11!63;CL:0000559!4.65e-11!63;CL:0002009!3.28e-10!65;CL:0000625!5.31e-09!11;CL:0002320!9.19e-08!365;CL:0000134!2.62e-07!358;CL:0000094!4.22e-07!8;CL:0000236!5.37e-07!14;CL:0002393!6.88e-07!9;CL:0002397!6.88e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.75e-18;25!CL:0000791;3.99e-16;18!CL:0000789;3.99e-16;18!CL:0002419;3.99e-16;18!CL:0000860;4.04e-15;33!CL:0002057;4.04e-15;33!CL:0000576;4.89e-14;48!CL:0000763;1.13e-13;100!CL:0000766;1.44e-12;69!CL:0002087;1.64e-12;104!CL:0000542;1.29e-11;53!CL:0000625;4.25e-11;11!CL:0000988;5.15e-11;177!CL:0000738;4.81e-10;136!CL:0000473;7.76e-10;39!CL:0000234;7.76e-10;39!CL:0000094;1.10e-08;8!CL:0000236;1.81e-07;13!CL:0000081;8.96e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.02e-60,168;CL:0000988,2.88e-59,177;CL:0002032,1.46e-56,161;CL:0000837,1.46e-56,161;CL:0000738,9.83e-44,136;CL:0002031,7.54e-38,120;CL:0000763,3.45e-35,108;CL:0000049,3.45e-35,108;CL:0002087,4.43e-35,115;CL:0000766,1.77e-24,72;CL:0000860,1.85e-23,42;CL:0002057,1.85e-23,42;CL:0000839,2.49e-19,66;CL:0000838,3.89e-19,52;CL:0000473,1.02e-18,48;CL:0000234,1.02e-18,48;CL:0000542,1.71e-18,53;CL:0000051,1.71e-18,53;CL:0000084,2.47e-18,25;CL:0000827,2.47e-18,25;CL:0000557,4.04e-18,67;CL:0000791,3.76e-16,18;CL:0000789,3.76e-16,18;CL:0002420,3.76e-16,18;CL:0002419,3.76e-16,18;CL:0000790,3.76e-16,18;CL:0002194,1.54e-14,59;CL:0000576,1.54e-14,59;CL:0000040,1.54e-14,59;CL:0000559,1.54e-14,59;CL:0002009,1.26e-13,61;CL:0000625,4.32e-11,11;CL:0002320,1.13e-10,361;CL:0000134,1.73e-10,354;CL:0000094,1.16e-08,8;CL:0002393,2.16e-08,9;CL:0002397,2.16e-08,9;CL:0000236,5.12e-08,14;CL:0000219,1.42e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.55e-17;42!CL:0000790;3.99e-16;18!CL:0000051;1.29e-11;53!CL:0000049;2.85e-10;108 | |||
|ontology_enrichment_disease=DOID:1240!1.87e-11!39;DOID:8692!6.18e-10!31;DOID:2531!2.65e-08!51;DOID:0060083!2.65e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.70e-10;31!DOID:1240;4.40e-10;39!DOID:2531;7.47e-07;51!DOID:0060083;7.47e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.60e-13,39;DOID:8692,5.21e-11,31;DOID:2531,1.39e-09,51;DOID:0060083,1.39e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.46e-21!102;UBERON:0003061!3.46e-21!102;UBERON:0002193!3.73e-18!112;UBERON:0002405!6.03e-12!115;UBERON:0000178!3.14e-11!15;UBERON:0000179!3.14e-11!15;UBERON:0000463!3.14e-11!15;UBERON:0002371!3.45e-11!80;UBERON:0001474!5.81e-10!86;UBERON:0004765!2.85e-07!101;UBERON:0001434!2.85e-07!101;UBERON:0002384!3.77e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.52e-14;15!UBERON:0000179;5.52e-14;15!UBERON:0000463;5.52e-14;15!UBERON:0002390;1.12e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.24e-28,98;UBERON:0003061,1.24e-28,98;UBERON:0002193,1.46e-25,108;UBERON:0002405,7.91e-16,93;UBERON:0002371,3.70e-15,76;UBERON:0000178,6.06e-14,15;UBERON:0000179,6.06e-14,15;UBERON:0000463,6.06e-14,15;UBERON:0001474,6.61e-13,82;UBERON:0004765,1.06e-11,90;UBERON:0002384,9.05e-10,371;UBERON:0001434,4.61e-09,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.410502947249729,0.550975469195755,62.1515557421268,31.0901812458742,14.0882672217629,0,0,0,0,0,58.4264874276346,18.8358438900838,21.257711431835,12.1526087600877,1.56740831967947,3.88672399222775,0.77272670290256,7.12451370019867,4.91238726795452,11.4014508758274,4.18372266430232,2.87817521615278,2.78735733805593,6.04154023876516,5.63553554364021,4.25668013799453,7.58440497620561,8.39130088658974,10.8341189275473,6.77672422353377,3.27487380069415,2.69668181334102,3.97909060082173,1.60464513538047,5.11469700639233,7.25672860410775,5.98390972864896,6.81959600852311,5.80418477257168,1.70215567407342,3.73693349397345,5.27622197039161,4.69334626578181,6.08128765174327,2.42159801053347,2.94622108790052,2.53169909952708,20.9142733448822,30.1898105950362,15.3050811221114,10.2219054343311,20.4240574264449,9.96498637521897,52.727357592131,65.2446701213016,42.0127553658658,31.6793240030381,33.31445528699,23.1272406004524,20.0563204606258,26.8265311314128,32.7608890774055,24.4586602930399,21.9432363543134,12.5226853204079,15.8554041130153,14.5263826687587,91.1982167195278,51.0062792313198,38.4540763771613,7.86839080455332,14.9344089844683,20.3545484009514,35.7779100136051,15.9701910650459,20.8317034523283,33.1205438293449,55.816638899472,37.4149502493043,41.8699060763044,54.4315766167681,38.1712132782512,45.910949688637,42.4249793877484,58.5862037705999,48.1073122320187,9.93519973185805,10.7016331235885,20.9071047609954,41.5845287700068,24.526111590523,31.9573524298846,36.4348356508084,50.9704662918555,51.4355928546571,61.7793828891443,32.3736506017211,41.9796084586492,52.4709051519853,45.9347868965393,66.5113677506048,30.0394047404851,47.3369146536808,21.4340117746542,0,0,0,0,0,0,0,0,0,0,0.263504357079378,1.30979075497713,0,0,0,0,0,0.715471872916026,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.8053419282615,62.0448422637321,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.302714855289863,1.72852777344,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,1.58565817968474,0.927708378250397,2.5562667431294,1.14027160516907,2.27088765788066,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,2.53510069643662,8.84544495009863,7.68026878685825,16.7755977777567,21.5229767450449,0,0,0,0,0,0.325808305310325,0,1.44331342025273,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,64.5388841643686,175.744674290399,76.7114027500857,95.4074091620285,66.6560048491286,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,120.267359505055,37.0417829179623,49.8099697925485,34.7809628318118,0,0,0,0,0,83.8887866820844,119.66458368161,49.7298616123242,4.04881922673162,4.00136416847742,0,0,0,0,0,0,0,0,0,0,0,1.17480694477644,0,19.6429624816743,25.885704098234,25.4011587572198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.7018803705968,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,6.13927654608617,4.70583811844821,0,0,0,3.29731237272711,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,1.07923474549989,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0.349934720244983,0,2.01090682660736,0,4.80133383961574,0.43050537267123,0,0,0,117.727845341863,119.283404314211,145.829679916586,80.5223401047327,95.0246850829109,114.779776081111,96.1255958283844,131.658779264849,0,0,0.245040215981032,0,0,18.4968792705877,7.33360854552583,14.7688734860284,110.690103936508,40.2179807175377,103.554398947583,72.4456719532724,82.8491884890488,1.09675927041116,52.6332401889141,62.8072495643948,7.22646337966648,16.951175404048,33.2160065398455,28.5109436147285,0.307240764308458,0.671028323677248,1.00109485027145,22.2742428758326,0,1.23087398947712,14.6046066377031,0.33307196799782,105.740253815887,0,0.586032717087576,0,13.3732061132974,0,0,0.890894042497916,0,0,0,0.111308705022906,0,0,1.79323189425963,9.66993704359017,12.3447046448595,0,0.123084805461069,0,0,1.9692329214317,23.5323290304361,0.690503839458535,119.74154617347,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,1.03423011972439,0,0,0,0.120596438625408,0,0.552896299656123,0.591095237907095,0.219385397153973,0,0,1.07730361905316,0,0.23056390438806,0,0.108647371922008,0.31900115973192,0,0,20.4386596391473,16.0119861522925,27.4249275135258,0,0,0,0,27.9728379005467,0,0,2.82706142867882,0,2.98578579323551,1.76915129006678,4.888241159469,2.07564790076435,5.31324937469962,3.9680340812073,0.067401132980677,0.802577647298789,0,0.182454789215666,0,0,0,2.41981432097328,0.91821828489147,0.695052375913368,0.300646838828985,0,7.31119259977904,0,1.2557316736289,14.3366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| ||
|short_description=p1@RAB37 | |||
}} | }} |
Latest revision as of 08:47, 17 September 2015
Short description: | p1@RAB37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB37_5end |
Coexpression cluster: | C3675_Mast_Whole_blood_acute_NK_Neutrophils_CD34 |
Association with transcript: | 6bp_to_, -6bp_to_ENST00000392610, ENST00000481224_5end |
EntrezGene: | RAB37 |
HGNC: | 30268 |
UniProt: | A8MTC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.24e-28 | 98 |
blood island | 1.24e-28 | 98 |
hemolymphoid system | 1.46e-25 | 108 |
immune system | 7.91e-16 | 93 |
bone marrow | 3.70e-15 | 76 |
blood | 6.06e-14 | 15 |
haemolymphatic fluid | 6.06e-14 | 15 |
organism substance | 6.06e-14 | 15 |
bone element | 6.61e-13 | 82 |
skeletal element | 1.06e-11 | 90 |
connective tissue | 9.05e-10 | 371 |
skeletal system | 4.61e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.60e-13 | 39 |
myeloid leukemia | 5.21e-11 | 31 |
hematologic cancer | 1.39e-09 | 51 |
immune system cancer | 1.39e-09 | 51 |