FFCP PHASE1:Hg19::chr10:101418491..101418499,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:101418491..101418499,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr10:101418491..101418499,- | |description=CAGE_peak_at_chr10:101418491..101418499,- | ||
|id=chr10:101418491..101418499,- | |id=chr10:101418491..101418499,- | ||
|ontology_enrichment_celltype=CL:0002057!5.99e-66!42;CL:0000860!4.64e-61!45;CL:0002009!1.47e-45!65;CL:0002194!6.84e-44!63;CL:0000576!6.84e-44!63;CL:0000040!6.84e-44!63;CL:0000559!6.84e-44!63;CL:0000557!4.09e-41!71;CL:0000766!5.97e-41!76;CL:0000839!8.09e-39!70;CL:0000763!3.04e-31!112;CL:0000049!3.04e-31!112;CL:0000738!8.75e-22!140;CL:0002031!2.01e-20!124;CL:0002087!6.36e-20!119;CL:0002032!1.43e-18!165;CL:0000837!1.43e-18!165;CL:0000037!1.75e-17!172;CL:0000566!1.75e-17!172;CL:0000988!4.50e-16!182;CL:0000134!1.60e-10!358;CL:0002320!3.93e-10!365;CL:0000219!9.30e-09!390;CL:0000569!1.74e-08!4;CL:0000011!1.74e-08!4;CL:0000048!9.95e-08!430;CL:0000723!1.74e-07!436;CL:0000034!3.58e-07!444;CL:0000063!9.40e-07!578 | |ontology_enrichment_celltype=CL:0002057!5.99e-66!42;CL:0000860!4.64e-61!45;CL:0002009!1.47e-45!65;CL:0002194!6.84e-44!63;CL:0000576!6.84e-44!63;CL:0000040!6.84e-44!63;CL:0000559!6.84e-44!63;CL:0000557!4.09e-41!71;CL:0000766!5.97e-41!76;CL:0000839!8.09e-39!70;CL:0000763!3.04e-31!112;CL:0000049!3.04e-31!112;CL:0000738!8.75e-22!140;CL:0002031!2.01e-20!124;CL:0002087!6.36e-20!119;CL:0002032!1.43e-18!165;CL:0000837!1.43e-18!165;CL:0000037!1.75e-17!172;CL:0000566!1.75e-17!172;CL:0000988!4.50e-16!182;CL:0000134!1.60e-10!358;CL:0002320!3.93e-10!365;CL:0000219!9.30e-09!390;CL:0000569!1.74e-08!4;CL:0000011!1.74e-08!4;CL:0000048!9.95e-08!430;CL:0000723!1.74e-07!436;CL:0000034!3.58e-07!444;CL:0000063!9.40e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-77;33!CL:0002057;1.16e-77;33!CL:0000473;3.47e-50;39!CL:0000234;3.47e-50;39!CL:0000576;4.66e-37;48!CL:0000766;1.87e-23;69!CL:0000763;2.70e-11;100!CL:0002087;3.96e-11;104!CL:0000771;6.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.82e-65,42;CL:0002057,3.82e-65,42;CL:0000473,8.96e-57,48;CL:0000234,8.96e-57,48;CL:0000766,8.15e-47,72;CL:0002194,4.78e-45,59;CL:0000576,4.78e-45,59;CL:0000040,4.78e-45,59;CL:0000559,4.78e-45,59;CL:0002009,1.56e-43,61;CL:0000839,3.84e-40,66;CL:0000557,1.60e-39,67;CL:0000763,1.07e-30,108;CL:0000049,1.07e-30,108;CL:0000738,5.34e-24,136;CL:0002087,2.41e-22,115;CL:0002031,2.46e-21,120;CL:0002032,5.76e-20,161;CL:0000837,5.76e-20,161;CL:0000037,4.75e-19,168;CL:0000988,5.62e-18,177;CL:0000134,7.48e-08,354;CL:0002320,1.18e-07,361;CL:0000219,5.99e-07,386;CL:0000771,6.07e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-44;42!CL:0000049;2.28e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.10e-35!80;UBERON:0001474!1.09e-32!86;UBERON:0002390!2.44e-28!102;UBERON:0003061!2.44e-28!102;UBERON:0002405!7.38e-28!115;UBERON:0004765!9.51e-27!101;UBERON:0001434!9.51e-27!101;UBERON:0002193!3.91e-25!112;UBERON:0002204!2.15e-14!167;UBERON:0003081!3.71e-14!216;UBERON:0002384!1.34e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!1.10e-35!80;UBERON:0001474!1.09e-32!86;UBERON:0002390!2.44e-28!102;UBERON:0003061!2.44e-28!102;UBERON:0002405!7.38e-28!115;UBERON:0004765!9.51e-27!101;UBERON:0001434!9.51e-27!101;UBERON:0002193!3.91e-25!112;UBERON:0002204!2.15e-14!167;UBERON:0003081!3.71e-14!216;UBERON:0002384!1.34e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-34,76;UBERON:0001474,4.98e-32,82;UBERON:0004765,4.87e-29,90;UBERON:0002405,4.76e-28,93;UBERON:0002390,1.57e-26,98;UBERON:0003061,1.57e-26,98;UBERON:0001434,5.77e-26,100;UBERON:0002193,6.55e-24,108;UBERON:0002204,8.99e-15,167;UBERON:0003081,8.89e-12,203;UBERON:0002384,2.22e-07,371;UBERON:0000926,8.82e-07,315;UBERON:0004120,8.82e-07,315;UBERON:0006603,8.82e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.464858073811369,2.46700732813095,1.54853185447552,3.16461631554365,5.63553554364021,6.14853797710322,0.344745680736619,0.645484683583826,0,0.188242339542605,0.545812300115692,0.449446968890169,1.83650335422542,0.962787081228281,1.27867425159808,0.659702600373432,0.598390972864896,0.426224750532694,3.77272010217159,1.70215567407342,2.4912889959823,2.51248665256743,3.65038042894141,1.3031330682307,2.42159801053347,2.20966581592539,1.58231193720442,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.464858073811369,2.46700732813095,1.54853185447552,3.16461631554365,5.63553554364021,6.14853797710322,0.344745680736619,0.645484683583826,0,0.188242339542605,0.545812300115692,0.449446968890169,1.83650335422542,0.962787081228281,1.27867425159808,0.659702600373432,0.598390972864896,0.426224750532694,3.77272010217159,1.70215567407342,2.4912889959823,2.51248665256743,3.65038042894141,1.3031330682307,2.42159801053347,2.20966581592539,1.58231193720442,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:101418491..101418499,- | |short_description=p@chr10:101418491..101418499,- | ||
}} | }} |
Latest revision as of 09:24, 23 July 2015
Short description: | p@chr10:101418491..101418499, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:101418491..101418499, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.82e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.82e-65 | 42 |
defensive cell | 8.96e-57 | 48 |
phagocyte | 8.96e-57 | 48 |
myeloid leukocyte | 8.15e-47 | 72 |
monopoietic cell | 4.78e-45 | 59 |
monocyte | 4.78e-45 | 59 |
monoblast | 4.78e-45 | 59 |
promonocyte | 4.78e-45 | 59 |
macrophage dendritic cell progenitor | 1.56e-43 | 61 |
myeloid lineage restricted progenitor cell | 3.84e-40 | 66 |
granulocyte monocyte progenitor cell | 1.60e-39 | 67 |
myeloid cell | 1.07e-30 | 108 |
common myeloid progenitor | 1.07e-30 | 108 |
leukocyte | 5.34e-24 | 136 |
nongranular leukocyte | 2.41e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.46e-21 | 120 |
hematopoietic oligopotent progenitor cell | 5.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.76e-20 | 161 |
hematopoietic stem cell | 4.75e-19 | 168 |
hematopoietic cell | 5.62e-18 | 177 |
mesenchymal cell | 7.48e-08 | 354 |
connective tissue cell | 1.18e-07 | 361 |
motile cell | 5.99e-07 | 386 |
eosinophil | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-34 | 76 |
bone element | 4.98e-32 | 82 |
skeletal element | 4.87e-29 | 90 |
immune system | 4.76e-28 | 93 |
hematopoietic system | 1.57e-26 | 98 |
blood island | 1.57e-26 | 98 |
skeletal system | 5.77e-26 | 100 |
hemolymphoid system | 6.55e-24 | 108 |
musculoskeletal system | 8.99e-15 | 167 |
lateral plate mesoderm | 8.89e-12 | 203 |
connective tissue | 2.22e-07 | 371 |
mesoderm | 8.82e-07 | 315 |
mesoderm-derived structure | 8.82e-07 | 315 |
presumptive mesoderm | 8.82e-07 | 315 |