FFCP PHASE1:Hg19::chr15:52392689..52392701,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000558607_5end | |association_with_transcript=18bp_to_ENST00000558607_5end | ||
|cluster_id=chr15:52392689..52392701,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_3_at_ENST00000558607_5end | |description=CAGE_peak_3_at_ENST00000558607_5end | ||
|id=chr15:52392689..52392701,- | |id=chr15:52392689..52392701,- | ||
|ontology_enrichment_celltype=CL:0000860!7.18e-41!45;CL:0002057!4.99e-39!42;CL:0000557!6.26e-37!71;CL:0000839!2.07e-35!70;CL:0002009!1.05e-34!65;CL:0002194!7.07e-34!63;CL:0000576!7.07e-34!63;CL:0000040!7.07e-34!63;CL:0000559!7.07e-34!63;CL:0000766!1.54e-33!76;CL:0000763!7.01e-26!112;CL:0000049!7.01e-26!112;CL:0002031!1.58e-25!124;CL:0000738!2.00e-23!140;CL:0002087!6.02e-23!119;CL:0002032!4.72e-21!165;CL:0000837!4.72e-21!165;CL:0000037!1.18e-20!172;CL:0000566!1.18e-20!172;CL:0000988!1.06e-19!182;CL:0002320!5.62e-08!365;CL:0000134!6.24e-08!358;CL:0000048!4.24e-07!430;CL:0000219!6.71e-07!390;CL:0000723!8.76e-07!436 | |ontology_enrichment_celltype=CL:0000860!7.18e-41!45;CL:0002057!4.99e-39!42;CL:0000557!6.26e-37!71;CL:0000839!2.07e-35!70;CL:0002009!1.05e-34!65;CL:0002194!7.07e-34!63;CL:0000576!7.07e-34!63;CL:0000040!7.07e-34!63;CL:0000559!7.07e-34!63;CL:0000766!1.54e-33!76;CL:0000763!7.01e-26!112;CL:0000049!7.01e-26!112;CL:0002031!1.58e-25!124;CL:0000738!2.00e-23!140;CL:0002087!6.02e-23!119;CL:0002032!4.72e-21!165;CL:0000837!4.72e-21!165;CL:0000037!1.18e-20!172;CL:0000566!1.18e-20!172;CL:0000988!1.06e-19!182;CL:0002320!5.62e-08!365;CL:0000134!6.24e-08!358;CL:0000048!4.24e-07!430;CL:0000219!6.71e-07!390;CL:0000723!8.76e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.54e-54;33!CL:0002057;2.54e-54;33!CL:0000473;2.04e-38;39!CL:0000234;2.04e-38;39!CL:0000576;1.11e-29;48!CL:0000766;1.78e-15;69!CL:0002087;7.98e-15;104!CL:0000763;5.15e-09;100!CL:0000945;2.93e-08;24!CL:0000738;4.88e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.12e-58,42;CL:0002057,4.12e-58,42;CL:0000473,1.80e-50,48;CL:0000234,1.80e-50,48;CL:0002194,9.07e-40,59;CL:0000576,9.07e-40,59;CL:0000040,9.07e-40,59;CL:0000559,9.07e-40,59;CL:0002009,2.18e-38,61;CL:0000839,2.72e-35,66;CL:0000557,9.96e-35,67;CL:0002087,8.66e-33,115;CL:0000766,3.88e-32,72;CL:0002031,2.76e-31,120;CL:0000738,3.28e-27,136;CL:0002032,1.01e-24,161;CL:0000837,1.01e-24,161;CL:0000037,1.52e-23,168;CL:0000763,4.77e-23,108;CL:0000049,4.77e-23,108;CL:0000988,3.64e-22,177;CL:0000134,3.49e-09,354;CL:0002320,6.28e-09,361;CL:0000945,2.63e-08,24;CL:0000826,2.63e-08,24;CL:0000219,5.00e-08,386;CL:0000048,6.37e-07,427;CL:0000723,9.06e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-41;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;4.15e-09;1!DOID:0050177;4.15e-09;1!DOID:0050427;4.15e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.00e-09,1;DOID:0050177,3.00e-09,1;DOID:0050427,3.00e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.75e-31!80;UBERON:0001474!1.72e-28!86;UBERON:0002193!2.65e-27!112;UBERON:0002390!1.31e-26!102;UBERON:0003061!1.31e-26!102;UBERON:0002405!3.63e-26!115;UBERON:0004765!1.41e-22!101;UBERON:0001434!1.41e-22!101;UBERON:0002204!2.87e-13!167;UBERON:0003081!5.47e-09!216;UBERON:0002384!2.26e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!1.75e-31!80;UBERON:0001474!1.72e-28!86;UBERON:0002193!2.65e-27!112;UBERON:0002390!1.31e-26!102;UBERON:0003061!1.31e-26!102;UBERON:0002405!3.63e-26!115;UBERON:0004765!1.41e-22!101;UBERON:0001434!1.41e-22!101;UBERON:0002204!2.87e-13!167;UBERON:0003081!5.47e-09!216;UBERON:0002384!2.26e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.63e-30,76;UBERON:0001474,6.86e-28,82;UBERON:0002405,2.40e-27,93;UBERON:0002390,8.43e-26,98;UBERON:0003061,8.43e-26,98;UBERON:0004765,3.67e-25,90;UBERON:0002193,3.93e-23,108;UBERON:0001434,2.33e-22,100;UBERON:0002204,3.67e-12,167;UBERON:0003081,8.61e-11,203;UBERON:0002384,1.40e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,3.43860325865781,3.11982239909794,2.44003422072406,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,1.20326668482085,0,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,2.09186133215116,1.23350366406548,1.23882548358041,3.16461631554365,1.2808035326455,0.945928919554341,8.61864201841546,2.5819387343353,0,0.941211697713023,1.36453075028923,0.449446968890169,6.42776173978895,2.56743221660875,1.27867425159808,0,0.199463657621632,0,4.93355705668593,0.56738522469114,2.4912889959823,0.75374599577023,2.08593167368081,0.434377689410233,4.23779651843358,1.84138817993782,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.621984346622316,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0.614481528616916,0.223676107892416,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58478091468246,0,0,0,2.04628948090749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0.343395705182793,0.336749488765919,0,0.192619830407303,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59611629104531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0.342233301085281,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,1.9234109538194 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,3.43860325865781,3.11982239909794,2.44003422072406,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,1.20326668482085,0,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,2.09186133215116,1.23350366406548,1.23882548358041,3.16461631554365,1.2808035326455,0.945928919554341,8.61864201841546,2.5819387343353,0,0.941211697713023,1.36453075028923,0.449446968890169,6.42776173978895,2.56743221660875,1.27867425159808,0,0.199463657621632,0,4.93355705668593,0.56738522469114,2.4912889959823,0.75374599577023,2.08593167368081,0.434377689410233,4.23779651843358,1.84138817993782,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.621984346622316,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0.614481528616916,0.223676107892416,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58478091468246,0,0,0,2.04628948090749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0.343395705182793,0.336749488765919,0,0.192619830407303,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59611629104531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0.342233301085281,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,1.9234109538194 | ||
|short_description=p3@ENST00000558607 | |short_description=p3@ENST00000558607 | ||
}} | }} |
Latest revision as of 02:31, 25 July 2015
Short description: | p3@ENST00000558607 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000558607_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 18bp_to_ENST00000558607_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.12e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.12e-58 | 42 |
defensive cell | 1.80e-50 | 48 |
phagocyte | 1.80e-50 | 48 |
monopoietic cell | 9.07e-40 | 59 |
monocyte | 9.07e-40 | 59 |
monoblast | 9.07e-40 | 59 |
promonocyte | 9.07e-40 | 59 |
macrophage dendritic cell progenitor | 2.18e-38 | 61 |
myeloid lineage restricted progenitor cell | 2.72e-35 | 66 |
granulocyte monocyte progenitor cell | 9.96e-35 | 67 |
nongranular leukocyte | 8.66e-33 | 115 |
myeloid leukocyte | 3.88e-32 | 72 |
hematopoietic lineage restricted progenitor cell | 2.76e-31 | 120 |
leukocyte | 3.28e-27 | 136 |
hematopoietic oligopotent progenitor cell | 1.01e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-24 | 161 |
hematopoietic stem cell | 1.52e-23 | 168 |
myeloid cell | 4.77e-23 | 108 |
common myeloid progenitor | 4.77e-23 | 108 |
hematopoietic cell | 3.64e-22 | 177 |
mesenchymal cell | 3.49e-09 | 354 |
connective tissue cell | 6.28e-09 | 361 |
lymphocyte of B lineage | 2.63e-08 | 24 |
pro-B cell | 2.63e-08 | 24 |
motile cell | 5.00e-08 | 386 |
multi fate stem cell | 6.37e-07 | 427 |
somatic stem cell | 9.06e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.63e-30 | 76 |
bone element | 6.86e-28 | 82 |
immune system | 2.40e-27 | 93 |
hematopoietic system | 8.43e-26 | 98 |
blood island | 8.43e-26 | 98 |
skeletal element | 3.67e-25 | 90 |
hemolymphoid system | 3.93e-23 | 108 |
skeletal system | 2.33e-22 | 100 |
musculoskeletal system | 3.67e-12 | 167 |
lateral plate mesoderm | 8.61e-11 | 203 |
connective tissue | 1.40e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.00e-09 | 1 |
monogenic disease | 3.00e-09 | 1 |
xeroderma pigmentosum | 3.00e-09 | 1 |