FFCP PHASE1:Hg19::chr16:29840929..29840977,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:29840929..29840977,+ | |||
|coexpression_cluster_id=C3557 | |coexpression_cluster_id=C3557 | ||
|description=CAGE_peak_at_chr16:29840929..29840977,+ | |description=CAGE_peak_at_chr16:29840929..29840977,+ | ||
|id=chr16:29840929..29840977,+ | |id=chr16:29840929..29840977,+ | ||
|ontology_enrichment_celltype=CL:0000181!7.34e-16!12;CL:0000417!7.34e-16!12;CL:0000668!7.34e-16!12;CL:0000414!7.34e-16!12;CL:0000412!7.34e-16!12;CL:0000182!7.34e-16!12;CL:0000223!8.85e-12!59;CL:0000066!4.16e-08!254 | |ontology_enrichment_celltype=CL:0000181!7.34e-16!12;CL:0000417!7.34e-16!12;CL:0000668!7.34e-16!12;CL:0000414!7.34e-16!12;CL:0000412!7.34e-16!12;CL:0000182!7.34e-16!12;CL:0000223!8.85e-12!59;CL:0000066!4.16e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.41e-27;12!CL:0002563;1.46e-14;4!CL:0002253;3.82e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.69e-27,12;CL:0002563,1.51e-14,4;CL:0000223,5.57e-14,58;CL:0002253,3.82e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.90e-19;11!UBERON:0009497;1.64e-16;13!UBERON:0003104;3.83e-15;31!CL:0000223;3.58e-09;58!UBERON:0001041;2.68e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.10e-16!106;DOID:0050687!5.46e-12!143;DOID:3493!2.81e-09!2;DOID:162!1.40e-07!235;DOID:14566!2.75e-07!239;DOID:299!7.91e-07!25 | |ontology_enrichment_disease=DOID:305!1.10e-16!106;DOID:0050687!5.46e-12!143;DOID:3493!2.81e-09!2;DOID:162!1.40e-07!235;DOID:14566!2.75e-07!239;DOID:299!7.91e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;3.56e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.56e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000160;1.59e-18;17!UBERON:0002107;2.64e-17;19!UBERON:0006925;2.64e-17;19!UBERON:0001242;1.46e-14;4!UBERON:0001262;1.46e-14;4!UBERON:0004786;1.46e-14;4!UBERON:0004808;1.46e-14;4!UBERON:0001277;1.46e-14;4!UBERON:0005409;1.67e-14;22!UBERON:0001052;2.41e-14;4!UBERON:0002423;3.71e-13;25!UBERON:0004907;1.15e-11;5!UBERON:0002108;1.38e-11;4!UBERON:0002365;3.14e-10;31!UBERON:0002330;3.14e-10;31!UBERON:0002368;1.71e-09;33!UBERON:0000485;1.03e-08;7!UBERON:0003929;1.03e-08;7!UBERON:0004921;2.54e-08;33!UBERON:0001007;6.11e-08;81!UBERON:0003350;9.87e-08;8!UBERON:0000949;3.11e-07;43 | |||
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| ||
|short_description=p@chr16:29840929..29840977,+ | |short_description=p@chr16:29840929..29840977,+ | ||
}} | }} |
Latest revision as of 07:56, 25 July 2015
Short description: | p@chr16:29840929..29840977, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29840929..29840977, + |
Coexpression cluster: | C3557_signet_Prostate_Intestinal_lung_colon_rectal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.69e-27 | 12 |
intestinal epithelial cell | 1.51e-14 | 4 |
endodermal cell | 5.57e-14 | 58 |
epithelial cell of large intestine | 3.82e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.56e-08 | 2 |