FFCP PHASE1:Hg19::chr16:70740254..70740259,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:70740254..70740259,- | |||
|coexpression_cluster_id=C393 | |coexpression_cluster_id=C393 | ||
|description=CAGE_peak_at_chr16:70740254..70740259,- | |description=CAGE_peak_at_chr16:70740254..70740259,- | ||
|id=chr16:70740254..70740259,- | |id=chr16:70740254..70740259,- | ||
|ontology_enrichment_celltype=CL:0000066!1.54e-13!254;CL:0000077!1.98e-10!19 | |ontology_enrichment_celltype=CL:0000066!1.54e-13!254;CL:0000077!1.98e-10!19 | ||
|ontology_enrichment_celltype_v019=CL:0002537;6.20e-12;5!CL:0002541;3.66e-09;3!CL:0000346;5.96e-09;3!CL:1000428;5.96e-09;3!CL:0002586;5.96e-09;3!CL:0000349;5.09e-08;19!CL:0000077;8.36e-08;19!CL:0000222;2.49e-07;1!CL:0000669;6.44e-07;4!CL:0000149;6.44e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,5.17e-12,5;CL:0002541,5.29e-09,3;CL:0000346,5.97e-09,3;CL:1000428,5.97e-09,3;CL:0002586,5.97e-09,3;CL:0000349,5.42e-08,19;CL:0000077,6.30e-08,19;CL:0000669,6.45e-07,4;CL:0000149,6.45e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.03e-07;1!UBERON:0003099;2.49e-07;1!UBERON:0003852;2.49e-07;1 | |||
|ontology_enrichment_disease=DOID:305!3.03e-14!106;DOID:0050687!1.08e-09!143;DOID:162!7.83e-07!235;DOID:299!8.23e-07!25 | |ontology_enrichment_disease=DOID:305!3.03e-14!106;DOID:0050687!1.08e-09!143;DOID:162!7.83e-07!235;DOID:299!8.23e-07!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.27e-09!14;UBERON:0000158!1.27e-09!14;UBERON:0004923!2.46e-09!57;UBERON:0003102!1.43e-07!95 | |ontology_enrichment_uberon=UBERON:0005631!1.27e-09!14;UBERON:0000158!1.27e-09!14;UBERON:0004923!2.46e-09!57;UBERON:0003102!1.43e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.89e-15;10!UBERON:0000158;1.89e-15;10!UBERON:0003124;3.66e-09;3!UBERON:0000920;3.66e-09;3!UBERON:0001781;5.96e-09;3!UBERON:0000412;5.96e-09;3!UBERON:0001782;5.96e-09;3!UBERON:0001992;5.96e-09;3!UBERON:0000478;7.42e-09;24!UBERON:0000305;1.18e-08;7!UBERON:0000997;2.49e-07;1!UBERON:0005705;2.49e-07;1!UBERON:0005056;2.49e-07;1!UBERON:0008193;2.49e-07;1!UBERON:0010912;2.49e-07;1!UBERON:0002514;2.49e-07;1!UBERON:0003457;2.49e-07;1!UBERON:0008907;2.49e-07;1!UBERON:0008001;2.49e-07;1!UBERON:0007213;2.49e-07;1!UBERON:0009891;2.49e-07;1!UBERON:0007914;2.49e-07;1!UBERON:0004176;2.49e-07;1!UBERON:0007375;2.49e-07;1!UBERON:0003323;2.49e-07;1!UBERON:0010258;2.49e-07;1!UBERON:0005253;2.49e-07;1!UBERON:0007842;2.49e-07;1!UBERON:0002397;2.49e-07;1!UBERON:0003113;2.49e-07;1!UBERON:0003277;2.49e-07;1!UBERON:0001709;2.49e-07;1!UBERON:0002244;2.49e-07;1!UBERON:0005620;2.49e-07;1!UBERON:0010364;2.49e-07;1!UBERON:0004288;2.49e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.58e-15,14;UBERON:0000158,1.58e-15,14;UBERON:0000920,5.29e-09,3;UBERON:0000412,5.97e-09,3;UBERON:0001782,5.97e-09,3;UBERON:0001992,5.97e-09,3;UBERON:0005424,5.97e-09,3;UBERON:0000478,8.00e-09,24;UBERON:0000305,1.04e-08,7;UBERON:0003124,1.92e-08,7;UBERON:0004871,1.13e-07,8;UBERON:0000997,1.51e-07,1;UBERON:0005056,1.51e-07,1;UBERON:0004923,1.58e-07,66;UBERON:0005705,4.61e-07,1;UBERON:0008193,4.61e-07,1;UBERON:0010912,4.61e-07,1;UBERON:0002514,4.61e-07,1;UBERON:0003457,4.61e-07,1;UBERON:0008907,4.61e-07,1;UBERON:0008001,4.61e-07,1;UBERON:0007213,4.61e-07,1;UBERON:0009891,4.61e-07,1;UBERON:0007914,4.61e-07,1;UBERON:0009292,4.61e-07,1;UBERON:0003099,4.61e-07,1;UBERON:0007375,4.61e-07,1;UBERON:0003323,4.61e-07,1;UBERON:0010258,4.61e-07,1;UBERON:0007842,4.61e-07,1;UBERON:0009494,4.61e-07,1;UBERON:0010042,4.61e-07,1;UBERON:0010045,4.61e-07,1;UBERON:0010259,4.61e-07,1;UBERON:0010359,4.61e-07,1;UBERON:0009526,4.61e-07,1;UBERON:0002397,4.61e-07,1;UBERON:0003113,4.61e-07,1;UBERON:0003277,4.61e-07,1;UBERON:0001709,4.61e-07,1;UBERON:0004066,4.61e-07,1;UBERON:0002244,4.61e-07,1;UBERON:0005620,4.61e-07,1;UBERON:0004362,4.61e-07,1;UBERON:0010364,4.61e-07,1;UBERON:0010046,4.61e-07,1;UBERON:0005868,4.61e-07,1;UBERON:0007238,4.61e-07,1;UBERON:0004288,4.61e-07,1;UBERON:0004068,4.61e-07,1;UBERON:0010334,4.61e-07,1;UBERON:0003852,4.61e-07,1;UBERON:0010253,4.61e-07,1;UBERON:0001781,6.45e-07,4 | |||
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|short_description=p@chr16:70740254..70740259,- | |short_description=p@chr16:70740254..70740259,- | ||
}} | }} |
Latest revision as of 12:01, 25 July 2015
Short description: | p@chr16:70740254..70740259, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:70740254..70740259, - |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 5.17e-12 | 5 |
chorionic membrane mesenchymal stem cell | 5.29e-09 | 3 |
hair follicle dermal papilla cell | 5.97e-09 | 3 |
stem cell of epidermis | 5.97e-09 | 3 |
retinal pigment epithelial cell | 5.97e-09 | 3 |
extraembryonic cell | 5.42e-08 | 19 |
mesothelial cell | 6.30e-08 | 19 |
pericyte cell | 6.45e-07 | 4 |
visual pigment cell | 6.45e-07 | 4 |