FFCP PHASE1:Hg19::chr17:10101893..10101900,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8522 | |EntrezGene=8522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |HGNC=4169 | ||
|TSSclassifier=strong | |||
|UniProt=O60861,F5H2K0 | |UniProt=O60861,F5H2K0 | ||
|association_with_transcript=-25bp_to_ENST00000323816,ENST00000540214,NM_201433,uc002gmg.1_5end | |association_with_transcript=-25bp_to_ENST00000323816,ENST00000540214,NM_201433,uc002gmg.1_5end | ||
|cluster_id=chr17:10101893..10101900,- | |||
|coexpression_cluster_id=C1427 | |coexpression_cluster_id=C1427 | ||
|description=CAGE_peak_21_at_GAS7_5end | |description=CAGE_peak_21_at_GAS7_5end | ||
|id=chr17:10101893..10101900,- | |id=chr17:10101893..10101900,- | ||
|ontology_enrichment_celltype=CL:0000766!4.47e-34!76;CL:0000557!5.06e-34!71;CL:0000839!4.31e-33!70;CL:0002057!1.46e-31!42;CL:0002194!4.29e-31!63;CL:0000576!4.29e-31!63;CL:0000040!4.29e-31!63;CL:0000559!4.29e-31!63;CL:0002009!2.03e-29!65;CL:0000860!3.60e-28!45;CL:0000763!3.46e-19!112;CL:0000049!3.46e-19!112;CL:0000738!1.77e-13!140;CL:0002031!1.33e-12!124;CL:0002087!2.40e-12!119;CL:0000037!3.04e-09!172;CL:0000566!3.04e-09!172;CL:0000988!4.45e-09!182;CL:0002032!1.15e-08!165;CL:0000837!1.15e-08!165;CL:0002393!3.69e-07!9;CL:0002397!3.69e-07!9 | |ontology_enrichment_celltype=CL:0000766!4.47e-34!76;CL:0000557!5.06e-34!71;CL:0000839!4.31e-33!70;CL:0002057!1.46e-31!42;CL:0002194!4.29e-31!63;CL:0000576!4.29e-31!63;CL:0000040!4.29e-31!63;CL:0000559!4.29e-31!63;CL:0002009!2.03e-29!65;CL:0000860!3.60e-28!45;CL:0000763!3.46e-19!112;CL:0000049!3.46e-19!112;CL:0000738!1.77e-13!140;CL:0002031!1.33e-12!124;CL:0002087!2.40e-12!119;CL:0000037!3.04e-09!172;CL:0000566!3.04e-09!172;CL:0000988!4.45e-09!182;CL:0002032!1.15e-08!165;CL:0000837!1.15e-08!165;CL:0002393!3.69e-07!9;CL:0002397!3.69e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.45e-43;39!CL:0000234;2.45e-43;39!CL:0000860;1.97e-41;33!CL:0002057;1.97e-41;33!CL:0000576;1.41e-29;48!CL:0000766;4.31e-25;69!CL:0000763;6.65e-15;100!CL:0000235;7.59e-11;6!CL:0002087;4.98e-07;104!CL:0000738;5.44e-07;136!CL:0002393;8.92e-07;6!CL:0002397;8.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.38e-61,48;CL:0000234,2.38e-61,48;CL:0000557,1.17e-54,67;CL:0000766,9.08e-53,72;CL:0000839,1.68e-52,66;CL:0000860,9.52e-52,42;CL:0002057,9.52e-52,42;CL:0002194,5.67e-50,59;CL:0000576,5.67e-50,59;CL:0000040,5.67e-50,59;CL:0000559,5.67e-50,59;CL:0002009,5.35e-48,61;CL:0000763,1.21e-36,108;CL:0000049,1.21e-36,108;CL:0002031,2.72e-25,120;CL:0000738,3.83e-25,136;CL:0002087,2.05e-23,115;CL:0002032,1.06e-21,161;CL:0000837,1.06e-21,161;CL:0000037,1.89e-21,168;CL:0000988,1.03e-19,177;CL:0000235,7.73e-11,6;CL:0002393,7.67e-07,9;CL:0002397,7.67e-07,9;CL:0000134,9.02e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.75e-38;42!CL:0000049;1.73e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.51e-29!80;UBERON:0001474!1.62e-27!86;UBERON:0002390!1.74e-27!102;UBERON:0003061!1.74e-27!102;UBERON:0002193!1.14e-24!112;UBERON:0002405!2.28e-23!115;UBERON:0004765!6.99e-22!101;UBERON:0001434!6.99e-22!101;UBERON:0007023!3.13e-17!115;UBERON:0002204!1.53e-10!167;UBERON:0000062!1.27e-09!511;UBERON:0002616!1.18e-08!59;UBERON:0001049!2.22e-08!57;UBERON:0005068!2.22e-08!57;UBERON:0006241!2.22e-08!57;UBERON:0007135!2.22e-08!57;UBERON:0001893!3.59e-08!34;UBERON:0001950!5.38e-08!20;UBERON:0003081!8.70e-08!216;UBERON:0002791!1.18e-07!33;UBERON:0002020!1.19e-07!34;UBERON:0003528!1.19e-07!34;UBERON:0001869!1.55e-07!32;UBERON:0002780!1.61e-07!41;UBERON:0001890!1.61e-07!41;UBERON:0006240!1.61e-07!41;UBERON:0005743!2.45e-07!86;UBERON:0001017!3.64e-07!82;UBERON:0003080!3.77e-07!42;UBERON:0002619!8.12e-07!22;UBERON:0000922!8.41e-07!612 | |ontology_enrichment_uberon=UBERON:0002371!3.51e-29!80;UBERON:0001474!1.62e-27!86;UBERON:0002390!1.74e-27!102;UBERON:0003061!1.74e-27!102;UBERON:0002193!1.14e-24!112;UBERON:0002405!2.28e-23!115;UBERON:0004765!6.99e-22!101;UBERON:0001434!6.99e-22!101;UBERON:0007023!3.13e-17!115;UBERON:0002204!1.53e-10!167;UBERON:0000062!1.27e-09!511;UBERON:0002616!1.18e-08!59;UBERON:0001049!2.22e-08!57;UBERON:0005068!2.22e-08!57;UBERON:0006241!2.22e-08!57;UBERON:0007135!2.22e-08!57;UBERON:0001893!3.59e-08!34;UBERON:0001950!5.38e-08!20;UBERON:0003081!8.70e-08!216;UBERON:0002791!1.18e-07!33;UBERON:0002020!1.19e-07!34;UBERON:0003528!1.19e-07!34;UBERON:0001869!1.55e-07!32;UBERON:0002780!1.61e-07!41;UBERON:0001890!1.61e-07!41;UBERON:0006240!1.61e-07!41;UBERON:0005743!2.45e-07!86;UBERON:0001017!3.64e-07!82;UBERON:0003080!3.77e-07!42;UBERON:0002619!8.12e-07!22;UBERON:0000922!8.41e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;9.41e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.94e-47,76;UBERON:0001474,1.07e-44,82;UBERON:0002390,7.60e-40,98;UBERON:0003061,7.60e-40,98;UBERON:0004765,1.13e-39,90;UBERON:0002405,2.99e-38,93;UBERON:0002193,5.20e-35,108;UBERON:0001434,1.60e-34,100;UBERON:0002204,3.08e-18,167;UBERON:0003081,1.35e-16,203;UBERON:0000926,2.66e-11,315;UBERON:0004120,2.66e-11,315;UBERON:0006603,2.66e-11,315;UBERON:0002021,1.99e-07,5 | |||
|phase1_expression=0.363356758541113,0,0.845726424575827,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0.393364276848904,0,1.54816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,3.00816671205213,1.95309783644267,0.895661896959697,0.647787332037959,2.83333124397605,2.18097358169347,1.51150377475524,2.42584061187816,1.16214518452842,1.6446715520873,1.85823822537062,1.1507695692886,1.7931249457037,1.41889337933151,2.75796544589295,1.29096936716765,1.35426486594342,2.25890807451126,1.91034305040492,1.57306439111559,1.83650335422542,0.962787081228281,1.27867425159808,2.30895910130701,1.99463657621632,0.426224750532694,1.16083695451434,1.13477044938228,1.24564449799115,1.25624332628372,4.17186334736161,0.434377689410233,0.605399502633369,1.47311054395026,1.58231193720442,0.845021145247767,1.91343869968539,1.25795187305026,0.561643155732475,0.450530678524519,1.28580469357664,0.285012743741249,1.39241674039363,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,1.5905718941022,0.973269740605272,0,0,0,0.327447688744282,0,0,0.649094787309367,0.870648686496336,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.933633106199299,0,0,0.454072282934794,2.30470369792,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309157587715317,0,0,0,0.0974370051611986,0,0.368199594569197,1.2931684545505,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.232387885739037,0.207322110030741,1.51392510525377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,1.72351904261178,0.468008530278475,1.18904929830983,0,0,0,0,0,0,0.985326475791887,0.264145302039678,8.29312462163088,3.747118788841,8.2057581727147,0,0,0,0,0,0,0,1.12131084345361,0.87192013766656,0.80672114403045,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,1.06617584622764,0,0,0,0.399891964728228,3.64871341923571,3.51579964002488,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0,0.513372145118994,1.27047312111232,0,0,0.335032530668698,0,0.749007023947182,2.99161459204025,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0.343143423810856,1.44737618286021,0.431428401637234,0.960548020230999,0,0,0,0.496215615637554,0.306923946576125,0,0.896974044789907,0.511707249066704,0.804269605718038,0,0,0.887808626565635,0.410635780069046,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0.640944426764839,0,0,0,0.28853842595289,1.56512055366511,0.318852545457645,0,0,1.05836791361941,0,0,0,0,0,0.50787533340481,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.140669416410513,0,0,0.844501632511974,0.398495976502139,0.828851746593443,0,0,0,0,0,0,0,0.394573622547734,2.3948309234694,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0.658156191461918,0,0.557694977114413,1.07730361905316,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.808813595768125,1.60515529459758,0.234264445725339,0,0,0,1.18375320854817,0,1.53036380815245,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.872901148395775,1.059073520298,0.225980740780532,0,0,0.569797163602908,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,3.83239764200917,0,0,1.11712960508902,0.687481272035051,0,0,0.429226048136571,0.223171457441873,0.806201669840715,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.91124334987037,0.335434687599266,0.0788057072991982,0.367182116944987,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.906496732161005,0.146552233678082,1.32506888912221,0.387848869084652,0.13223260174269,0,0,0.106787412567695,1.10043013569766,0,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0.655745261419609,0,0.886068179966986,0.610131324509816,0.3755727921195,0,0.221858103073705,0.18628920882415,0.553394539744923,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0.621051827505038,0,0,0.521745061811734,0.150257608997218,0,0,0,0.537052785212442,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0.163565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| ||
|short_description=p21@GAS7 | |short_description=p21@GAS7 | ||
}} | }} |
Latest revision as of 14:01, 18 September 2015
Short description: | p21@GAS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_GAS7_5end |
Coexpression cluster: | C1427_Mast_Monocytederived_granulocyte_CD14_testicular_Macrophage_acute |
Association with transcript: | -25bp_to_ENST00000323816, ENST00000540214, NM_201433, uc002gmg.1_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | O60861F5H2K0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.38e-61 | 48 |
phagocyte | 2.38e-61 | 48 |
granulocyte monocyte progenitor cell | 1.17e-54 | 67 |
myeloid leukocyte | 9.08e-53 | 72 |
myeloid lineage restricted progenitor cell | 1.68e-52 | 66 |
classical monocyte | 9.52e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.52e-52 | 42 |
monopoietic cell | 5.67e-50 | 59 |
monocyte | 5.67e-50 | 59 |
monoblast | 5.67e-50 | 59 |
promonocyte | 5.67e-50 | 59 |
macrophage dendritic cell progenitor | 5.35e-48 | 61 |
myeloid cell | 1.21e-36 | 108 |
common myeloid progenitor | 1.21e-36 | 108 |
hematopoietic lineage restricted progenitor cell | 2.72e-25 | 120 |
leukocyte | 3.83e-25 | 136 |
nongranular leukocyte | 2.05e-23 | 115 |
hematopoietic oligopotent progenitor cell | 1.06e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-21 | 161 |
hematopoietic stem cell | 1.89e-21 | 168 |
hematopoietic cell | 1.03e-19 | 177 |
macrophage | 7.73e-11 | 6 |
intermediate monocyte | 7.67e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.67e-07 | 9 |
mesenchymal cell | 9.02e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.94e-47 | 76 |
bone element | 1.07e-44 | 82 |
hematopoietic system | 7.60e-40 | 98 |
blood island | 7.60e-40 | 98 |
skeletal element | 1.13e-39 | 90 |
immune system | 2.99e-38 | 93 |
hemolymphoid system | 5.20e-35 | 108 |
skeletal system | 1.60e-34 | 100 |
musculoskeletal system | 3.08e-18 | 167 |
lateral plate mesoderm | 1.35e-16 | 203 |
mesoderm | 2.66e-11 | 315 |
mesoderm-derived structure | 2.66e-11 | 315 |
presumptive mesoderm | 2.66e-11 | 315 |
occipital lobe | 1.99e-07 | 5 |