FFCP PHASE1:Hg19::chr19:39390320..39390346,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4793 | |EntrezGene=4793 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7798 | |HGNC=7798 | ||
|TSSclassifier=strong | |||
|UniProt=Q15653 | |UniProt=Q15653 | ||
|association_with_transcript=0bp_to_NM_001243116,uc010egk.1_5end | |association_with_transcript=0bp_to_NM_001243116,uc010egk.1_5end | ||
|cluster_id=chr19:39390320..39390346,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_NFKBIB_5end | |description=CAGE_peak_5_at_NFKBIB_5end | ||
|id=chr19:39390320..39390346,+ | |id=chr19:39390320..39390346,+ | ||
|ontology_enrichment_celltype=CL:0000860!3.86e-20!45;CL:0002057!9.31e-19!42;CL:0000766!1.39e-15!76;CL:0000738!1.46e-15!140;CL:0002009!3.67e-15!65;CL:0002194!6.91e-15!63;CL:0000576!6.91e-15!63;CL:0000040!6.91e-15!63;CL:0000559!6.91e-15!63;CL:0000557!1.75e-14!71;CL:0000839!8.45e-14!70;CL:0002087!1.16e-13!119;CL:0002031!4.94e-13!124;CL:0000037!1.28e-11!172;CL:0000566!1.28e-11!172;CL:0002032!3.99e-11!165;CL:0000837!3.99e-11!165;CL:0000988!7.46e-11!182;CL:0000763!9.46e-11!112;CL:0000049!9.46e-11!112 | |ontology_enrichment_celltype=CL:0000860!3.86e-20!45;CL:0002057!9.31e-19!42;CL:0000766!1.39e-15!76;CL:0000738!1.46e-15!140;CL:0002009!3.67e-15!65;CL:0002194!6.91e-15!63;CL:0000576!6.91e-15!63;CL:0000040!6.91e-15!63;CL:0000559!6.91e-15!63;CL:0000557!1.75e-14!71;CL:0000839!8.45e-14!70;CL:0002087!1.16e-13!119;CL:0002031!4.94e-13!124;CL:0000037!1.28e-11!172;CL:0000566!1.28e-11!172;CL:0002032!3.99e-11!165;CL:0000837!3.99e-11!165;CL:0000988!7.46e-11!182;CL:0000763!9.46e-11!112;CL:0000049!9.46e-11!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.90e-45;33!CL:0002057;2.90e-45;33!CL:0000473;2.90e-35;39!CL:0000234;2.90e-35;39!CL:0000576;3.94e-20;48!CL:0000766;4.70e-14;69!CL:0002087;3.79e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.33e-39,42;CL:0002057,3.33e-39,42;CL:0000473,6.43e-34,48;CL:0000234,6.43e-34,48;CL:0002194,1.63e-26,59;CL:0000576,1.63e-26,59;CL:0000040,1.63e-26,59;CL:0000559,1.63e-26,59;CL:0002009,1.47e-25,61;CL:0000766,3.70e-24,72;CL:0000839,2.03e-23,66;CL:0000557,4.99e-23,67;CL:0002087,8.86e-18,115;CL:0000763,4.23e-17,108;CL:0000049,4.23e-17,108;CL:0002031,6.83e-17,120;CL:0000738,2.76e-16,136;CL:0002032,9.22e-15,161;CL:0000837,9.22e-15,161;CL:0000037,5.54e-14,168;CL:0000988,4.52e-13,177;CL:0000134,9.96e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-30;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.42e-12!115;UBERON:0002193!1.41e-11!112;UBERON:0002371!2.64e-11!80;UBERON:0002390!7.64e-11!102;UBERON:0003061!7.64e-11!102;UBERON:0001474!9.11e-11!86;UBERON:0004765!1.03e-09!101;UBERON:0001434!1.03e-09!101 | |ontology_enrichment_uberon=UBERON:0002405!4.42e-12!115;UBERON:0002193!1.41e-11!112;UBERON:0002371!2.64e-11!80;UBERON:0002390!7.64e-11!102;UBERON:0003061!7.64e-11!102;UBERON:0001474!9.11e-11!86;UBERON:0004765!1.03e-09!101;UBERON:0001434!1.03e-09!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.68e-20,76;UBERON:0001474,2.66e-18,82;UBERON:0004765,2.03e-16,90;UBERON:0002405,8.56e-16,93;UBERON:0002390,7.73e-15,98;UBERON:0003061,7.73e-15,98;UBERON:0001434,1.75e-14,100;UBERON:0002193,3.44e-13,108;UBERON:0002204,1.79e-07,167 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0.30120591877825,0,0.154934401160603,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0,0.485168122375632,2.32429036905685,2.05583944010913,1.54853185447552,1.1507695692886,0.512321413058201,0.47296445977717,3.44745680736619,3.87290810150296,5.41705946377367,1.12945403725563,0.545812300115692,1.12361742222542,1.22433556948361,0.641858054152187,1.91801137739712,0,0.199463657621632,0.426224750532694,1.45104619314292,1.13477044938228,4.35975574296902,0.75374599577023,2.60741459210101,0.65156653411535,0.605399502633369,0,1.89877432464531,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0.334231370655521,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,25.4099406465563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,1.77236972004421,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0.190254152234598,0,1.71697232418975,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.788123040807709,0.862510299438069,0.641715181398742,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0.483437798366489,0,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0.325378394664303,0.309123034943167,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,1.23087398947712,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0.659215496907038,0,0,0,0,0.20453736500431,0.492339221844278,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0,0,0,0.221158519862449,0.295547618953547,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0.54323685961004,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0.0884575645033392,0,0.593042257361244,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,1.20258735531594,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0.698906672968121,0,0.0967563312890851,0.146178634172371,0.246346371159628,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0,0.195551382734803,0.160317640503067,0,0.39961921916426,0.144090417154106,0.114536596165916,0,0.288109595976299,0,0,0,0,0.101998217636322,0,0,0,0,0,1.31443677139657,0,0,0,0.199679000498991,0,0.446342914883745,0.0671834724867263,0.360299883542404,1.16495949527454,0.0787831823072236,0,0.13480708770837,0.984274815147488,0.423366660328922,0,0,0,0,0,0.899895566206002,0,0,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0.656740165994712,0,0,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0,0.306345576763462,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0.196295437002051,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0.157115589916002,0.840816489941367,0,0,0,0,0,0,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| ||
|short_description=p5@NFKBIB | |short_description=p5@NFKBIB | ||
}} | }} |
Latest revision as of 20:55, 17 September 2015
Short description: | p5@NFKBIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NFKBIB_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NM_001243116, uc010egk.1_5end |
EntrezGene: | NFKBIB |
HGNC: | 7798 |
UniProt: | Q15653 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.33e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.33e-39 | 42 |
defensive cell | 6.43e-34 | 48 |
phagocyte | 6.43e-34 | 48 |
monopoietic cell | 1.63e-26 | 59 |
monocyte | 1.63e-26 | 59 |
monoblast | 1.63e-26 | 59 |
promonocyte | 1.63e-26 | 59 |
macrophage dendritic cell progenitor | 1.47e-25 | 61 |
myeloid leukocyte | 3.70e-24 | 72 |
myeloid lineage restricted progenitor cell | 2.03e-23 | 66 |
granulocyte monocyte progenitor cell | 4.99e-23 | 67 |
nongranular leukocyte | 8.86e-18 | 115 |
myeloid cell | 4.23e-17 | 108 |
common myeloid progenitor | 4.23e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 6.83e-17 | 120 |
leukocyte | 2.76e-16 | 136 |
hematopoietic oligopotent progenitor cell | 9.22e-15 | 161 |
hematopoietic multipotent progenitor cell | 9.22e-15 | 161 |
hematopoietic stem cell | 5.54e-14 | 168 |
hematopoietic cell | 4.52e-13 | 177 |
mesenchymal cell | 9.96e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.68e-20 | 76 |
bone element | 2.66e-18 | 82 |
skeletal element | 2.03e-16 | 90 |
immune system | 8.56e-16 | 93 |
hematopoietic system | 7.73e-15 | 98 |
blood island | 7.73e-15 | 98 |
skeletal system | 1.75e-14 | 100 |
hemolymphoid system | 3.44e-13 | 108 |
musculoskeletal system | 1.79e-07 | 167 |