FFCP PHASE1:Hg19::chr1:161274636..161274641,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:161274636..161274641,- | |||
|coexpression_cluster_id=C801 | |coexpression_cluster_id=C801 | ||
|description=CAGE_peak_at_chr1:161274636..161274641,- | |description=CAGE_peak_at_chr1:161274636..161274641,- | ||
|id=chr1:161274636..161274641,- | |id=chr1:161274636..161274641,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.19e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.10e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.84e-74;3!UBERON:0003057;5.84e-74;3!UBERON:0004874;3.58e-26;1!UBERON:0003056;1.60e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.81e-12!115;UBERON:0000073!8.94e-09!94;UBERON:0001016!8.94e-09!94;UBERON:0005743!1.06e-08!86;UBERON:0001017!1.08e-08!82;UBERON:0001049!1.24e-08!57;UBERON:0005068!1.24e-08!57;UBERON:0006241!1.24e-08!57;UBERON:0007135!1.24e-08!57;UBERON:0002308!2.06e-08!9;UBERON:0000125!2.06e-08!9;UBERON:0003076!3.88e-08!15;UBERON:0003057!3.88e-08!15 | |ontology_enrichment_uberon=UBERON:0007023!1.81e-12!115;UBERON:0000073!8.94e-09!94;UBERON:0001016!8.94e-09!94;UBERON:0005743!1.06e-08!86;UBERON:0001017!1.08e-08!82;UBERON:0001049!1.24e-08!57;UBERON:0005068!1.24e-08!57;UBERON:0006241!1.24e-08!57;UBERON:0007135!1.24e-08!57;UBERON:0002308!2.06e-08!9;UBERON:0000125!2.06e-08!9;UBERON:0003076!3.88e-08!15;UBERON:0003057!3.88e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002240;5.84e-74;3!UBERON:0005174;5.84e-74;3!UBERON:0001137;5.84e-74;3!UBERON:0002038;2.16e-26;1!UBERON:0009661;2.16e-26;1!UBERON:0002950;2.16e-26;1!UBERON:0001891;2.16e-26;1!UBERON:0000989;3.58e-26;1!UBERON:0008811;3.58e-26;1!UBERON:0001723;1.60e-09;3!UBERON:0001033;1.60e-09;3!UBERON:0000489;2.39e-08;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.55e-74,3;UBERON:0005174,4.55e-74,3;UBERON:0001137,4.55e-74,3;UBERON:0002038,2.16e-26,1;UBERON:0009661,2.16e-26,1;UBERON:0002950,2.16e-26,1;UBERON:0001891,2.16e-26,1;UBERON:0009616,2.16e-26,1;UBERON:0010286,2.16e-26,1;UBERON:0000989,3.58e-26,1;UBERON:0008811,3.58e-26,1;UBERON:0006258,3.58e-26,1;UBERON:0005876,3.58e-26,1;UBERON:0004874,3.58e-26,1;UBERON:0003076,1.59e-15,15;UBERON:0003057,1.59e-15,15;UBERON:0001723,1.81e-09,3;UBERON:0001033,1.81e-09,3;UBERON:0010056,1.81e-09,3;UBERON:0000489,7.36e-08,31;UBERON:0003075,1.07e-07,82;UBERON:0007284,1.07e-07,82;UBERON:0001049,2.12e-07,56;UBERON:0005068,2.12e-07,56;UBERON:0006241,2.12e-07,56;UBERON:0007135,2.12e-07,56;UBERON:0002346,2.39e-07,86;UBERON:0010314,9.22e-07,132 | |||
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| ||
|short_description=p@chr1:161274636..161274641,- | |short_description=p@chr1:161274636..161274641,- | ||
}} | }} |
Latest revision as of 23:36, 27 July 2015
Short description: | p@chr1:161274636..161274641, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:161274636..161274641, - |
Coexpression cluster: | C801_substantia_spinal_medulla_retina_pineal_penis_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.10e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.55e-74 | 3 |
dorsal region element | 4.55e-74 | 3 |
dorsum | 4.55e-74 | 3 |
substantia nigra | 2.16e-26 | 1 |
midbrain nucleus | 2.16e-26 | 1 |
regional part of midbrain | 2.16e-26 | 1 |
midbrain | 2.16e-26 | 1 |
presumptive midbrain | 2.16e-26 | 1 |
midbrain neural tube | 2.16e-26 | 1 |
penis | 3.58e-26 | 1 |
intromittent organ | 3.58e-26 | 1 |
lateral plate mesenchyme | 3.58e-26 | 1 |
undifferentiated genital tubercle | 3.58e-26 | 1 |
somatopleure | 3.58e-26 | 1 |
posterior neural tube | 1.59e-15 | 15 |
chordal neural plate | 1.59e-15 | 15 |
tongue | 1.81e-09 | 3 |
gustatory system | 1.81e-09 | 3 |
future tongue | 1.81e-09 | 3 |
cavitated compound organ | 7.36e-08 | 31 |
neural plate | 1.07e-07 | 82 |
presumptive neural plate | 1.07e-07 | 82 |
neural tube | 2.12e-07 | 56 |
neural rod | 2.12e-07 | 56 |
future spinal cord | 2.12e-07 | 56 |
neural keel | 2.12e-07 | 56 |
neurectoderm | 2.39e-07 | 86 |
structure with developmental contribution from neural crest | 9.22e-07 | 132 |