FFCP PHASE1:Hg19::chr19:11689803..11689815,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:11689803..11689815,-
|short_description=p5@ACP5
|description=CAGE_peak_5_at_ACP5_5end
|association_with_transcript=-2bp_to_ENST00000218758,ENST00000412435...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54 | |EntrezGene=54 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=124 | |HGNC=124 | ||
|TSSclassifier=strong | |||
|UniProt=P13686 | |UniProt=P13686 | ||
|association_with_transcript=-2bp_to_ENST00000218758,ENST00000412435,NM_001111035,NM_001111036,uc002msi.3,uc002msj.3,uc010dye.1_5end | |||
|cluster_id=chr19:11689803..11689815,- | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_5_at_ACP5_5end | |||
|id=chr19:11689803..11689815,- | |||
|ontology_enrichment_celltype=CL:0002087!1.59e-34!119;CL:0000738!2.27e-33!140;CL:0002031!9.58e-31!124;CL:0002194!5.33e-22!63;CL:0000576!5.33e-22!63;CL:0000040!5.33e-22!63;CL:0000559!5.33e-22!63;CL:0000037!3.19e-21!172;CL:0000566!3.19e-21!172;CL:0002009!9.71e-21!65;CL:0000839!2.75e-20!70;CL:0002032!4.36e-20!165;CL:0000837!4.36e-20!165;CL:0000766!7.37e-20!76;CL:0000988!2.17e-19!182;CL:0000557!5.63e-19!71;CL:0002057!2.60e-17!42;CL:0000860!2.92e-15!45;CL:0000542!5.61e-12!53;CL:0000051!5.61e-12!53;CL:0000838!2.02e-11!52;CL:0000763!2.87e-09!112;CL:0000049!2.87e-09!112;CL:0000945!7.94e-08!24;CL:0000826!7.94e-08!24;CL:0000236!1.05e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.30e-12;39!CL:0000234;4.30e-12;39!CL:0000235;1.00e-11;6!CL:0000236;4.22e-10;13!CL:0000945;2.19e-09;24!CL:0002087;7.17e-09;104!CL:0000576;4.15e-08;48!CL:0000738;4.85e-08;136!CL:0000860;8.33e-08;33!CL:0002057;8.33e-08;33!CL:0000542;1.27e-07;53!CL:0000766;3.50e-07;69!CL:0000451;5.11e-07;10!CL:0000624;7.42e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.07e-33,115;CL:0000738,4.79e-29,136;CL:0002031,2.39e-27,120;CL:0002194,7.65e-21,59;CL:0000576,7.65e-21,59;CL:0000040,7.65e-21,59;CL:0000559,7.65e-21,59;CL:0000037,5.72e-20,168;CL:0002009,7.91e-20,61;CL:0000988,4.85e-18,177;CL:0002032,6.87e-18,161;CL:0000837,6.87e-18,161;CL:0000839,1.43e-17,66;CL:0000557,3.68e-17,67;CL:0000473,2.16e-15,48;CL:0000234,2.16e-15,48;CL:0000766,2.74e-15,72;CL:0000235,1.05e-11,6;CL:0000542,1.83e-11,53;CL:0000051,1.83e-11,53;CL:0000838,1.07e-10,52;CL:0000945,1.11e-09,24;CL:0000826,1.11e-09,24;CL:0000236,1.30e-09,14;CL:0000860,3.93e-09,42;CL:0002057,3.93e-09,42;CL:0000763,6.79e-08,108;CL:0000049,6.79e-08,108;CL:0000451,4.23e-07,10;CL:0000624,5.03e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.66e-08;42!CL:0000051;1.27e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.34e-19!102;UBERON:0003061!2.34e-19!102;UBERON:0002193!1.59e-16!112;UBERON:0002371!8.88e-15!80;UBERON:0001474!1.54e-12!86;UBERON:0002405!1.43e-10!115;UBERON:0004765!2.51e-10!101;UBERON:0001434!2.51e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.86e-20,98;UBERON:0003061,6.86e-20,98;UBERON:0002193,5.72e-18,108;UBERON:0002405,2.76e-15,93;UBERON:0002371,5.59e-14,76;UBERON:0001474,2.88e-12,82;UBERON:0004765,2.68e-11,90;UBERON:0001434,2.98e-09,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,1.29902789771517,1.31360943119913,3.06972047123349,0.393364276848904,0.383829398097213,0.77408061658038,1.83884244895785,1.50602959389125,2.21852406100073,0,0,0,0.553995408531877,1.00272223735071,1.08505435357926,9.85228086655667,13.6035339727971,11.07574940827,3.78035420826868,1.88937971844405,0.485168122375632,1.16214518452842,1.23350366406548,1.23882548358041,1.43846196161075,1.0246428261164,0.945928919554341,1.03423704220986,1.29096936716765,0,3.01187743268168,1.91034305040492,1.34834090667051,1.83650335422542,1.60464513538047,0.639337125799041,1.31940520074686,2.19410023383795,0.852449501065388,0.580418477257168,0,0,0.502497330513487,1.0429658368404,0.65156653411535,0.605399502633369,0.736555271975129,0,0.633765858935825,0.425208599930087,1.25795187305026,0.898629049171961,0.300353785683013,0.32145117339416,1.14005097496499,0.79566670879636,0.91332076882317,1.75996244461323,1.63841583378639,3.55803701545422,2.98711155796555,2.00197993518006,2.87376219977242,1.98313461835459,0.954053754535364,1.70763890732835,2.34894875748376,1.14681968437569,1.32171328579026,0,0.790152254325231,0.983548850569165,2.35806457649499,2.67281948699362,2.84217042164153,1.95553359980154,1.89379122293893,1.94826728407911,4.67923918917729,2.3568472597987,1.32920336750173,0.812411591295047,6.02029202710673,7.28332346335318,3.94650971048823,3.59255023121603,0.579606171470105,0.593146252648242,0.802622484269139,1.04535523804977,2.83273356743915,3.06576394881537,2.06176467289578,0.759059076058509,0,1.30216690771284,0,1.05402583354441,1.27986611154418,0,0.947109008176067,0.821127996921047,0.604820229674197,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,4.73583874780305,0.741568885568859,10.7100639906045,10.0995247633575,8.50930947320737,2.62339686735876,1.71598473234038,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0.22452937262617,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.09098448236334,1.14721838155602,0.731842236777572,0.397589304964456,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,2.41450627898976,0,0.301586917234893,1.574003567695,0,0,0,0.115930404975077,0,0,0,0,0,0,12.5570673104573,19.1883497414175,12.7822799568306,2.81201501960331,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0.492663237895943,0.176096868026452,0,0,0,0.190493682876507,0.381988425558278,1.17217447210047,3.4214489204541,0.925447434329912,3.00343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,13.378615870531,14.0631985600995,6.32501818449095,0,0,0,0,0,0,0,0.394061520403854,1.2937654491571,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,1.44737618286021,0,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0.902399225814824,0.231046011313244,2.35304930753057,1.46139224653261,0,0,0,0,0,0,0.501689773854853,1.01950509218015,0.831076008928724,0.447749509444357,0.219259876645935,0,2.05160100093111,0.328014645699706,0,1.03041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,0.510450849978337,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.577332676353072,0.670302275535787,3.26672954583968,0.941438007767792,1.29151611801369,1.68471475667626,0.886860307073351,0.229723400206959,1.01489521846434,0.764637207142375,0,0.476463550915578,0.411362273086194,1.94541993357815,1.08006287447623,2.37937552888281,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0.296964680832639,0.614321404198464,0,0,0,0,0,0,2.76283915531148,0.503865495708552,0,0.123084805461069,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,3.59030577639089,0,2.23300811812344,0.732780747214898,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.619202951523374,0.611030144933625,0,0,0,0.134802265961354,0,0,0.364909578431332,0.19566461893209,0,0,1.20990716048664,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0,0,0,0,1.16386819786103,0,0.225980740780532,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,1.28602518772015,0.962776056180637,1.66176135211674,0,0,0,0,2.44297692627514,1.25891011523995,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0.704815022316672,2.66968531419237,0,5.79934677486074,0,0.197611631897944,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,2.28991551958182,0,0,0,2.79982354196902,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0.601682626794058,0,2.34454203369928,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0.127762427639595,0.535701835878287,0.336283722218824,0.606965604236632,0,0.354809480650555,0,0,0,0,0,0,0.470958557103084,0,0.840816489941367,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,1.96251696636676,1.08043821351123,4.15263164957519,0.940634592723046,0.490296643507811,0,0,0,0,0,1.97366227757693,1.35361564744512,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,1.52983244612973,0,0,0.50141507858475,0.303114792872958,0,0,0,0,0,1.29177819672012,1.36564371450887,0,0.381882949668989,0,1.30630048738177,0.342233301085281,3.16554649168561,1.07583308089015,0,0,0,0,0,0,0,0.406896178315738,0,2.21401172950129,2.56454793842586 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,1.29902789771517,1.31360943119913,3.06972047123349,0.393364276848904,0.383829398097213,0.77408061658038,1.83884244895785,1.50602959389125,2.21852406100073,0,0,0,0.553995408531877,1.00272223735071,1.08505435357926,9.85228086655667,13.6035339727971,11.07574940827,3.78035420826868,1.88937971844405,0.485168122375632,1.16214518452842,1.23350366406548,1.23882548358041,1.43846196161075,1.0246428261164,0.945928919554341,1.03423704220986,1.29096936716765,0,3.01187743268168,1.91034305040492,1.34834090667051,1.83650335422542,1.60464513538047,0.639337125799041,1.31940520074686,2.19410023383795,0.852449501065388,0.580418477257168,0,0,0.502497330513487,1.0429658368404,0.65156653411535,0.605399502633369,0.736555271975129,0,0.633765858935825,0.425208599930087,1.25795187305026,0.898629049171961,0.300353785683013,0.32145117339416,1.14005097496499,0.79566670879636,0.91332076882317,1.75996244461323,1.63841583378639,3.55803701545422,2.98711155796555,2.00197993518006,2.87376219977242,1.98313461835459,0.954053754535364,1.70763890732835,2.34894875748376,1.14681968437569,1.32171328579026,0,0.790152254325231,0.983548850569165,2.35806457649499,2.67281948699362,2.84217042164153,1.95553359980154,1.89379122293893,1.94826728407911,4.67923918917729,2.3568472597987,1.32920336750173,0.812411591295047,6.02029202710673,7.28332346335318,3.94650971048823,3.59255023121603,0.579606171470105,0.593146252648242,0.802622484269139,1.04535523804977,2.83273356743915,3.06576394881537,2.06176467289578,0.759059076058509,0,1.30216690771284,0,1.05402583354441,1.27986611154418,0,0.947109008176067,0.821127996921047,0.604820229674197,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,4.73583874780305,0.741568885568859,10.7100639906045,10.0995247633575,8.50930947320737,2.62339686735876,1.71598473234038,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0.22452937262617,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.09098448236334,1.14721838155602,0.731842236777572,0.397589304964456,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,2.41450627898976,0,0.301586917234893,1.574003567695,0,0,0,0.115930404975077,0,0,0,0,0,0,12.5570673104573,19.1883497414175,12.7822799568306,2.81201501960331,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0.492663237895943,0.176096868026452,0,0,0,0.190493682876507,0.381988425558278,1.17217447210047,3.4214489204541,0.925447434329912,3.00343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,13.378615870531,14.0631985600995,6.32501818449095,0,0,0,0,0,0,0,0.394061520403854,1.2937654491571,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,1.44737618286021,0,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0.902399225814824,0.231046011313244,2.35304930753057,1.46139224653261,0,0,0,0,0,0,0.501689773854853,1.01950509218015,0.831076008928724,0.447749509444357,0.219259876645935,0,2.05160100093111,0.328014645699706,0,1.03041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,0.510450849978337,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.577332676353072,0.670302275535787,3.26672954583968,0.941438007767792,1.29151611801369,1.68471475667626,0.886860307073351,0.229723400206959,1.01489521846434,0.764637207142375,0,0.476463550915578,0.411362273086194,1.94541993357815,1.08006287447623,2.37937552888281,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0.296964680832639,0.614321404198464,0,0,0,0,0,0,2.76283915531148,0.503865495708552,0,0.123084805461069,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,3.59030577639089,0,2.23300811812344,0.732780747214898,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.619202951523374,0.611030144933625,0,0,0,0.134802265961354,0,0,0.364909578431332,0.19566461893209,0,0,1.20990716048664,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0,0,0,0,1.16386819786103,0,0.225980740780532,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,1.28602518772015,0.962776056180637,1.66176135211674,0,0,0,0,2.44297692627514,1.25891011523995,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0.704815022316672,2.66968531419237,0,5.79934677486074,0,0.197611631897944,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,2.28991551958182,0,0,0,2.79982354196902,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0.601682626794058,0,2.34454203369928,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0.127762427639595,0.535701835878287,0.336283722218824,0.606965604236632,0,0.354809480650555,0,0,0,0,0,0,0.470958557103084,0,0.840816489941367,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,1.96251696636676,1.08043821351123,4.15263164957519,0.940634592723046,0.490296643507811,0,0,0,0,0,1.97366227757693,1.35361564744512,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,1.52983244612973,0,0,0.50141507858475,0.303114792872958,0,0,0,0,0,1.29177819672012,1.36564371450887,0,0.381882949668989,0,1.30630048738177,0.342233301085281,3.16554649168561,1.07583308089015,0,0,0,0,0,0,0,0.406896178315738,0,2.21401172950129,2.56454793842586 | ||
|short_description=p5@ACP5 | |||
}} | }} |
Latest revision as of 06:24, 25 September 2015
Short description: | p5@ACP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACP5_5end |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | -2bp_to_ENST00000218758, ENST00000412435, NM_001111035, NM_001111036, uc002msi.3, uc002msj.3, uc010dye.1_5end |
EntrezGene: | ACP5 |
HGNC: | 124 |
UniProt: | P13686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.86e-20 | 98 |
blood island | 6.86e-20 | 98 |
hemolymphoid system | 5.72e-18 | 108 |
immune system | 2.76e-15 | 93 |
bone marrow | 5.59e-14 | 76 |
bone element | 2.88e-12 | 82 |
skeletal element | 2.68e-11 | 90 |
skeletal system | 2.98e-09 | 100 |