FFCP PHASE1:Hg19::chr19:13059576..13059596,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:13059576..13059596,+
|short_description=p5@RAD23A
|description=CAGE_peak_5_at_RAD23A_5end
|association_with_transcript=0bp_to_M77024_5end
|EntrezGene=588...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5886 | |EntrezGene=5886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9812 | |HGNC=9812 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_M77024_5end | |||
|cluster_id=chr19:13059576..13059596,+ | |||
|description=CAGE_peak_5_at_RAD23A_5end | |||
|id=chr19:13059576..13059596,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002188;2.73e-13;5!CL:1000746;1.21e-09;7!CL:1000612;1.21e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.57e-13,5;CL:1000746,8.22e-10,7;CL:1000612,8.22e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.12e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.21e-09;7!UBERON:0001229;1.21e-09;7!UBERON:0001389;8.13e-09;1!UBERON:0000026;8.13e-09;1!UBERON:0008784;8.13e-09;1!UBERON:0006058;8.13e-09;1!UBERON:0003663;8.13e-09;1!UBERON:0004256;8.13e-09;1!UBERON:0004708;8.13e-09;1!UBERON:0002101;8.13e-09;1!UBERON:0004709;8.13e-09;1!UBERON:0002529;8.13e-09;1!UBERON:0010538;8.13e-09;1!UBERON:0003661;8.13e-09;1!UBERON:0010890;8.13e-09;1!UBERON:0002471;8.13e-09;1!UBERON:0001383;8.13e-09;1!UBERON:0010758;8.13e-09;1!UBERON:0010707;8.13e-09;1!UBERON:0000978;8.13e-09;1!UBERON:0002103;8.13e-09;1!UBERON:0001665;8.13e-09;1!UBERON:0003823;8.13e-09;1!UBERON:0000154;8.13e-09;1!UBERON:0010709;8.13e-09;1!UBERON:0002084;2.12e-08;1!UBERON:0002082;2.12e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,8.22e-10,7;UBERON:0000074,8.22e-10,7;UBERON:0001229,8.22e-10,7;UBERON:0001230,8.22e-10,7;UBERON:0003220,8.22e-10,7;UBERON:0005749,8.22e-10,7;UBERON:0004199,8.22e-10,7;UBERON:0004209,8.22e-10,7;UBERON:0004198,8.22e-10,7;UBERON:0005418,8.15e-09,1;UBERON:0001389,8.15e-09,1;UBERON:0000026,8.15e-09,1;UBERON:0008784,8.15e-09,1;UBERON:0006058,8.15e-09,1;UBERON:0003663,8.15e-09,1;UBERON:0004256,8.15e-09,1;UBERON:0004708,8.15e-09,1;UBERON:0002101,8.15e-09,1;UBERON:0004709,8.15e-09,1;UBERON:0002529,8.15e-09,1;UBERON:0010538,8.15e-09,1;UBERON:0003661,8.15e-09,1;UBERON:0010890,8.15e-09,1;UBERON:0002471,8.15e-09,1;UBERON:0001383,8.15e-09,1;UBERON:0004357,8.15e-09,1;UBERON:0004347,8.15e-09,1;UBERON:0005420,8.15e-09,1;UBERON:0005732,8.15e-09,1;UBERON:0010758,8.15e-09,1;UBERON:0010707,8.15e-09,1;UBERON:0000978,8.15e-09,1;UBERON:0002103,8.15e-09,1;UBERON:0001665,8.15e-09,1;UBERON:0003823,8.15e-09,1;UBERON:0000154,8.15e-09,1;UBERON:0010709,8.15e-09,1;UBERON:0005733,8.15e-09,1;UBERON:0005730,8.15e-09,1;UBERON:0005103,1.21e-08,8;UBERON:0000083,1.21e-08,8;UBERON:0009201,1.21e-08,8;UBERON:0006553,1.21e-08,8;UBERON:0003074,1.21e-08,8;UBERON:0003060,1.21e-08,8;UBERON:0002084,1.59e-08,1;UBERON:0002082,1.59e-08,1;UBERON:0010226,1.59e-08,1;UBERON:0000080,9.81e-08,9;UBERON:0002120,9.81e-08,9;UBERON:0004875,9.81e-08,9;UBERON:0005721,9.81e-08,9;UBERON:0005754,9.81e-08,9;UBERON:0007297,9.81e-08,9 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0,0,0,0.631719873426831,0.783556884599516,0,1.39560233594486,0.218441372130172,0,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0,0.251085279189606,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.77272670290256,0.726991193897824,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0,0.768482119587302,0,0,0.645484683583826,0,0.564727018627814,0.545812300115692,0,0.612167784741805,0.641858054152187,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.196468613246569,0,0.741568885568859,0,0,0.26591592103773,0.238490624305342,0,0,0.198762407366705,0,0.694281003215189,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0,0.204154171254893,0.122834317311768,0.103325781175765,2.37600571456411,0.741800787835671,1.82032272387605,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0.45071417671979,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.276149695926898,0.323292113637624,0,0.201504196455281,0,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0,0.310983165046111,0,0,0,0,1.38134921352481,0,0,0,1.01150814046861,0.241011029883482,0.330881918197182,0.653638332277218,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.329250856225877,0,0.201057944823262,0.185176890317059,0,1.03993478527958,0,0.115930404975077,0,0.433099343283221,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,0.492663237895943,0.176096868026452,0.829312462163088,0.576479813667846,0.37872730027914,0.190493682876507,0.381988425558278,1.17217447210047,0,0.205654985406647,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0.448340575974109,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.234282829985426,0.902838299183157,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0,0,0,0.106727557803444,0,0,1.20956117331872,0.248107807818777,0,0,0.640695746278505,0,0.160853921143607,0,0,0.532685175939381,0.164254312027618,0.519254429183621,0.348631135379878,0.362578348774867,0.601519410909855,1.01289087829486,0.229628896329213,0.364182336013434,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.316654886678627,1.13733384070897,0,0,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0.657779629937804,1.0457418040996,0,0.328014645699706,0.976135183992909,0.412164046590889,0.183138929636687,0.082509499920588,0.574265537996172,0,0,1.06337790121334,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.340906509664404,0.0890320356467374,0.661139661443912,0.192190067365106,0.127612712494584,0.708104465988849,0.464845549297286,0,0,0.308033580176089,0,0.869932992075073,0,0,0.372158369359667,0,0,0.255897791311334,0.42793898803392,0,0.78494864019923,0,0.274537029736055,0,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0.35667105148125,0.354761064070598,0.633322905892992,0.658589785919804,0,0,0,0,2.17781969722645,0.659006605437454,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0.245040215981032,0,0,0.142283686696828,0.159426272728822,0.399158742865633,0,0.211673582723883,0,0.280797178113459,0,0.313359791546046,0,0,0,0.201799707191048,0,0.687010689511529,0,0,0,0.19538809540204,0,3.69262196843137,0,0,0,0.18714054040822,2.93016358543788,0.121360521749513,0.334330152832435,0,0,0.890894042497916,0.307160702099232,0,0,0.222617410045812,0,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0.493217028184668,0,0,0.969332746095218,0.185536196323703,0,0.7812832832557,0,0.724999575434793,0,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.241192877250816,0,0.221158519862449,0,0,0.435753854075961,0,0.307801034015188,0.455768223388005,0,0.987334088507493,0.108647371922008,0,0.4579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| ||
|short_description=p5@RAD23A | |||
}} | }} |
Latest revision as of 22:48, 15 September 2015
Short description: | p5@RAD23A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAD23A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_M77024_5end |
EntrezGene: | RAD23A |
HGNC: | 9812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.57e-13 | 5 |
glomerular cell | 8.22e-10 | 7 |
kidney corpuscule cell | 8.22e-10 | 7 |