FFCP PHASE1:Hg19::chr2:11605966..11605981,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1876 | |EntrezGene=1876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3120 | |HGNC=3120 | ||
|TSSclassifier=strong | |||
|UniProt=G5E936,Q53YM3 | |UniProt=G5E936,Q53YM3 | ||
|association_with_transcript=23bp_to_ENST00000307236,ENST00000542100,ENST00000546212_5end | |association_with_transcript=23bp_to_ENST00000307236,ENST00000542100,ENST00000546212_5end | ||
|cluster_id=chr2:11605966..11605981,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_3_at_E2F6_5end | |description=CAGE_peak_3_at_E2F6_5end | ||
|id=chr2:11605966..11605981,- | |id=chr2:11605966..11605981,- | ||
|ontology_enrichment_celltype=CL:0000763!1.18e-19!112;CL:0000049!1.18e-19!112;CL:0000860!1.33e-19!45;CL:0002057!1.78e-19!42;CL:0000557!4.19e-19!71;CL:0002009!4.47e-19!65;CL:0000766!4.46e-18!76;CL:0002194!6.69e-18!63;CL:0000576!6.69e-18!63;CL:0000040!6.69e-18!63;CL:0000559!6.69e-18!63;CL:0000839!7.60e-18!70;CL:0000063!7.26e-15!578;CL:0000548!2.74e-12!679;CL:0000004!2.74e-12!679;CL:0000255!2.74e-12!679;CL:0000012!3.77e-12!682;CL:0002032!1.34e-09!165;CL:0000837!1.34e-09!165;CL:0000037!1.82e-09!172;CL:0000566!1.82e-09!172;CL:0000134!1.91e-09!358;CL:0000003!9.96e-09!722;CL:0002320!1.01e-08!365;CL:0000988!2.47e-08!182;CL:0000048!2.92e-08!430;CL:0000723!7.73e-08!436;CL:0000219!7.82e-08!390;CL:0002031!1.52e-07!124;CL:0000034!3.07e-07!444;CL:0000738!3.51e-07!140;CL:0002087!8.91e-07!119 | |ontology_enrichment_celltype=CL:0000763!1.18e-19!112;CL:0000049!1.18e-19!112;CL:0000860!1.33e-19!45;CL:0002057!1.78e-19!42;CL:0000557!4.19e-19!71;CL:0002009!4.47e-19!65;CL:0000766!4.46e-18!76;CL:0002194!6.69e-18!63;CL:0000576!6.69e-18!63;CL:0000040!6.69e-18!63;CL:0000559!6.69e-18!63;CL:0000839!7.60e-18!70;CL:0000063!7.26e-15!578;CL:0000548!2.74e-12!679;CL:0000004!2.74e-12!679;CL:0000255!2.74e-12!679;CL:0000012!3.77e-12!682;CL:0002032!1.34e-09!165;CL:0000837!1.34e-09!165;CL:0000037!1.82e-09!172;CL:0000566!1.82e-09!172;CL:0000134!1.91e-09!358;CL:0000003!9.96e-09!722;CL:0002320!1.01e-08!365;CL:0000988!2.47e-08!182;CL:0000048!2.92e-08!430;CL:0000723!7.73e-08!436;CL:0000219!7.82e-08!390;CL:0002031!1.52e-07!124;CL:0000034!3.07e-07!444;CL:0000738!3.51e-07!140;CL:0002087!8.91e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.04e-62;33!CL:0002057;4.04e-62;33!CL:0000473;2.17e-45;39!CL:0000234;2.17e-45;39!CL:0000576;1.01e-30;48!CL:0000766;9.06e-23;69!CL:0000763;5.11e-13;100!CL:0000767;1.33e-07;3!CL:0002087;4.14e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.66e-59,42;CL:0002057,4.66e-59,42;CL:0000473,7.55e-54,48;CL:0000234,7.55e-54,48;CL:0002009,2.70e-50,61;CL:0000766,1.88e-48,72;CL:0000557,1.41e-47,67;CL:0002194,2.43e-46,59;CL:0000576,2.43e-46,59;CL:0000040,2.43e-46,59;CL:0000559,2.43e-46,59;CL:0000839,5.67e-43,66;CL:0000763,2.00e-41,108;CL:0000049,2.00e-41,108;CL:0002032,1.44e-23,161;CL:0000837,1.44e-23,161;CL:0000738,4.06e-23,136;CL:0000037,4.65e-22,168;CL:0002031,7.58e-22,120;CL:0000988,2.68e-20,177;CL:0002087,5.54e-19,115;CL:0000134,7.15e-10,354;CL:0002320,2.05e-09,361;CL:0000048,6.99e-09,427;CL:0000723,1.49e-08,433;CL:0000034,3.96e-08,441;CL:0000767,6.74e-08,3;CL:0000219,8.08e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.92e-43;42!CL:0000049;7.51e-13;108 | |||
|ontology_enrichment_disease=DOID:162!3.72e-10!235;DOID:14566!6.38e-10!239;DOID:305!8.41e-09!106 | |ontology_enrichment_disease=DOID:162!3.72e-10!235;DOID:14566!6.38e-10!239;DOID:305!8.41e-09!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.79e-17!80;UBERON:0002405!6.58e-15!115;UBERON:0001474!7.34e-15!86;UBERON:0002390!1.07e-13!102;UBERON:0003061!1.07e-13!102;UBERON:0002193!2.37e-13!112;UBERON:0004765!1.66e-11!101;UBERON:0001434!1.66e-11!101;UBERON:0002384!4.18e-08!375 | |ontology_enrichment_uberon=UBERON:0002371!9.79e-17!80;UBERON:0002405!6.58e-15!115;UBERON:0001474!7.34e-15!86;UBERON:0002390!1.07e-13!102;UBERON:0003061!1.07e-13!102;UBERON:0002193!2.37e-13!112;UBERON:0004765!1.66e-11!101;UBERON:0001434!1.66e-11!101;UBERON:0002384!4.18e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-40,76;UBERON:0001474,6.41e-37,82;UBERON:0002405,4.75e-33,93;UBERON:0004765,1.10e-32,90;UBERON:0002390,3.86e-29,98;UBERON:0003061,3.86e-29,98;UBERON:0001434,2.42e-28,100;UBERON:0002193,6.14e-27,108;UBERON:0002204,1.30e-17,167;UBERON:0003081,2.33e-13,203;UBERON:0002384,8.58e-09,371 | |||
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| ||
|short_description=p3@E2F6 | |short_description=p3@E2F6 | ||
}} | }} |
Latest revision as of 14:45, 16 September 2015
Short description: | p3@E2F6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_E2F6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 23bp_to_ENST00000307236, ENST00000542100, ENST00000546212_5end |
EntrezGene: | E2F6 |
HGNC: | 3120 |
UniProt: | G5E936Q53YM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.66e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.66e-59 | 42 |
defensive cell | 7.55e-54 | 48 |
phagocyte | 7.55e-54 | 48 |
macrophage dendritic cell progenitor | 2.70e-50 | 61 |
myeloid leukocyte | 1.88e-48 | 72 |
granulocyte monocyte progenitor cell | 1.41e-47 | 67 |
monopoietic cell | 2.43e-46 | 59 |
monocyte | 2.43e-46 | 59 |
monoblast | 2.43e-46 | 59 |
promonocyte | 2.43e-46 | 59 |
myeloid lineage restricted progenitor cell | 5.67e-43 | 66 |
myeloid cell | 2.00e-41 | 108 |
common myeloid progenitor | 2.00e-41 | 108 |
hematopoietic oligopotent progenitor cell | 1.44e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-23 | 161 |
leukocyte | 4.06e-23 | 136 |
hematopoietic stem cell | 4.65e-22 | 168 |
hematopoietic lineage restricted progenitor cell | 7.58e-22 | 120 |
hematopoietic cell | 2.68e-20 | 177 |
nongranular leukocyte | 5.54e-19 | 115 |
mesenchymal cell | 7.15e-10 | 354 |
connective tissue cell | 2.05e-09 | 361 |
multi fate stem cell | 6.99e-09 | 427 |
somatic stem cell | 1.49e-08 | 433 |
stem cell | 3.96e-08 | 441 |
basophil | 6.74e-08 | 3 |
motile cell | 8.08e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-40 | 76 |
bone element | 6.41e-37 | 82 |
immune system | 4.75e-33 | 93 |
skeletal element | 1.10e-32 | 90 |
hematopoietic system | 3.86e-29 | 98 |
blood island | 3.86e-29 | 98 |
skeletal system | 2.42e-28 | 100 |
hemolymphoid system | 6.14e-27 | 108 |
musculoskeletal system | 1.30e-17 | 167 |
lateral plate mesoderm | 2.33e-13 | 203 |
connective tissue | 8.58e-09 | 371 |