FFCP PHASE1:Hg19::chr19:18288651..18288682,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:18288651..18288682,+
|short_description=p5@IFI30
|description=CAGE_peak_5_at_IFI30_5end
|association_with_transcript=0bp_to_AF401212_5end
|EntrezGene=104...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10437 | |EntrezGene=10437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5398 | |HGNC=5398 | ||
|TSSclassifier=strong | |||
|UniProt=Q96P99 | |UniProt=Q96P99 | ||
|association_with_transcript=0bp_to_AF401212_5end | |||
|cluster_id=chr19:18288651..18288682,+ | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_5_at_IFI30_5end | |||
|id=chr19:18288651..18288682,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.10e-50!63;CL:0000576!2.10e-50!63;CL:0000040!2.10e-50!63;CL:0000559!2.10e-50!63;CL:0002009!7.68e-50!65;CL:0000860!1.47e-46!45;CL:0002057!3.43e-45!42;CL:0000557!4.37e-45!71;CL:0000839!1.77e-44!70;CL:0000766!5.56e-44!76;CL:0002087!3.47e-39!119;CL:0000738!7.24e-38!140;CL:0002031!1.72e-33!124;CL:0000763!1.15e-32!112;CL:0000049!1.15e-32!112;CL:0000037!5.76e-30!172;CL:0000566!5.76e-30!172;CL:0002032!2.09e-29!165;CL:0000837!2.09e-29!165;CL:0000988!3.84e-28!182;CL:0002393!7.53e-10!9;CL:0002397!7.53e-10!9;CL:0000235!3.95e-08!10;CL:0000134!3.30e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.08e-89;39!CL:0000234;1.08e-89;39!CL:0000860;1.94e-89;33!CL:0002057;1.94e-89;33!CL:0000576;4.20e-79;48!CL:0000766;3.34e-52;69!CL:0000763;7.35e-23;100!CL:0000235;1.81e-20;6!CL:0002087;3.36e-19;104!CL:0002393;1.96e-17;6!CL:0002397;1.96e-17;6!CL:0000738;2.28e-17;136!CL:0002619;2.69e-10;3!CL:0000875;1.23e-09;3!CL:0002396;1.23e-09;3!CL:0000988;2.31e-08;177!CL:0000990;3.15e-08;8!CL:0000219;2.39e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.64e-145,59;CL:0000576,5.64e-145,59;CL:0000040,5.64e-145,59;CL:0000559,5.64e-145,59;CL:0000473,5.05e-144,48;CL:0000234,5.05e-144,48;CL:0002009,6.53e-140,61;CL:0000839,1.42e-128,66;CL:0000557,1.66e-126,67;CL:0000860,7.14e-124,42;CL:0002057,7.14e-124,42;CL:0000766,5.12e-117,72;CL:0000763,1.92e-80,108;CL:0000049,1.92e-80,108;CL:0002087,6.09e-72,115;CL:0002031,8.44e-66,120;CL:0000738,6.16e-64,136;CL:0002032,4.21e-50,161;CL:0000837,4.21e-50,161;CL:0000037,1.74e-49,168;CL:0000988,2.35e-46,177;CL:0002393,1.33e-25,9;CL:0002397,1.33e-25,9;CL:0000235,1.85e-20,6;CL:0000134,6.22e-18,354;CL:0002320,2.43e-17,361;CL:0000219,2.95e-15,386;CL:0000048,1.05e-12,427;CL:0000723,2.35e-12,433;CL:0000034,6.69e-12,441;CL:0002619,2.74e-10,3;CL:0000875,1.21e-09,3;CL:0002396,1.21e-09,3;CL:0000990,3.10e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.33e-88;42!CL:0000049;1.03e-23;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.14e-43!112;UBERON:0002390!1.37e-43!102;UBERON:0003061!1.37e-43!102;UBERON:0002371!4.74e-40!80;UBERON:0001474!1.50e-35!86;UBERON:0002405!7.50e-35!115;UBERON:0004765!8.81e-28!101;UBERON:0001434!8.81e-28!101;UBERON:0002204!2.01e-14!167;UBERON:0003081!3.11e-13!216;UBERON:0001737!2.33e-08!9;UBERON:0002384!5.02e-07!375;UBERON:0000926!6.33e-07!448;UBERON:0004120!6.33e-07!448;UBERON:0006603!6.33e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.59e-110,76;UBERON:0001474,1.82e-101,82;UBERON:0002405,8.32e-92,93;UBERON:0004765,1.74e-91,90;UBERON:0002390,7.30e-90,98;UBERON:0003061,7.30e-90,98;UBERON:0002193,9.68e-84,108;UBERON:0001434,3.14e-81,100;UBERON:0002204,5.47e-44,167;UBERON:0003081,2.87e-37,203;UBERON:0000926,1.18e-19,315;UBERON:0004120,1.18e-19,315;UBERON:0006603,1.18e-19,315;UBERON:0002384,1.56e-16,371;UBERON:0000923,2.51e-08,560;UBERON:0010316,2.51e-08,560;UBERON:0005291,2.51e-08,560;UBERON:0006598,2.51e-08,560;UBERON:0010317,2.51e-08,560;UBERON:0002532,2.51e-08,560;UBERON:0002050,3.56e-08,564;UBERON:0005423,1.49e-07,581;UBERON:0000922,3.61e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.152826811495903,0.246301768349837,0.550975469195755,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0.232401601740905,0.284338464974843,0,1.66198622559563,1.40381113229099,1.51907609501096,4.03047853631864,4.21061765824673,5.40908692031792,10.4686731921287,11.7141542543531,15.2827958548324,16.5024616203036,17.2690512969167,12.3882548358041,17.8369283239733,14.8573209786878,4.02019790810595,9.99762474136194,9.68227025375739,9.47985406160392,17.130052898377,16.1014628534129,8.7642158933583,14.6920268338033,5.77672248736969,17.9014395223732,12.8642007072819,12.9651377454061,20.0325632750366,5.5139755339431,8.5107783703671,9.9651559839292,9.79869794501299,13.5585558789252,5.86409880703815,6.05399502633369,5.15588690382591,4.43047342417238,1.90129757680748,2.97646019951061,1.88692780957538,1.90958672949042,3.00353785683013,0.48217676009124,1.71007646244749,2.38700012638908,1.27864907635244,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,2.92092654289215,1.74129737299267,3.72282289452822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.661763836394364,1.08939722046203,0.949082476444386,1.21348177344148,1.17732879075208,0.769494313892781,0,0,0,0,1.26755034821831,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,4.18568910348575,5.38209809820247,6.68840230299277,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.54099393465,30.6376825773597,71.6835394242308,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0.213648142254946,0,0,0.371606350251437,0,0,0,0,0,0.423347165447766,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.561421621224659,0.73254089635947,0,0,0,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,2.3948309234694,0,0,0,0,0.520855522170466,0,0,0.455173793141999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.265372693510018,0,0,0.123563938946503,0.313265848516366,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.219267951258557,0.328461828212837,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0.343189995723929,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0,0.295282444544246,0.0846733320657845,0,0,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0.226624183040251,0.293104467356165,0,0.258565912723101,0,0,0,0.640724475406168,0,6.62782488555513,3.47316215268366,0.197611631897944,0.487170393523584,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0.447764408660622,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,1.19578356282027,1.30852315404675,0,0.245772908753719,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.460935950223117,0,0,0,0,0.111231401892069,0,0,0,0.913158720509496,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0.098150233615243,0,0,0,0,0,0.467878926924211,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0,0.218559560503957,0,0,0,0.785233868459781,0,0,0.169927114687817,0.375935671919414,0.0644578879735772,0.399764623699716,0,0,0,0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| ||
|short_description=p5@IFI30 | |||
}} | }} |
Latest revision as of 14:19, 16 September 2015
Short description: | p5@IFI30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IFI30_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | 0bp_to_AF401212_5end |
EntrezGene: | IFI30 |
HGNC: | 5398 |
UniProt: | Q96P99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.59e-110 | 76 |
bone element | 1.82e-101 | 82 |
immune system | 8.32e-92 | 93 |
skeletal element | 1.74e-91 | 90 |
hematopoietic system | 7.30e-90 | 98 |
blood island | 7.30e-90 | 98 |
hemolymphoid system | 9.68e-84 | 108 |
skeletal system | 3.14e-81 | 100 |
musculoskeletal system | 5.47e-44 | 167 |
lateral plate mesoderm | 2.87e-37 | 203 |
mesoderm | 1.18e-19 | 315 |
mesoderm-derived structure | 1.18e-19 | 315 |
presumptive mesoderm | 1.18e-19 | 315 |
connective tissue | 1.56e-16 | 371 |
germ layer | 2.51e-08 | 560 |
germ layer / neural crest | 2.51e-08 | 560 |
embryonic tissue | 2.51e-08 | 560 |
presumptive structure | 2.51e-08 | 560 |
germ layer / neural crest derived structure | 2.51e-08 | 560 |
epiblast (generic) | 2.51e-08 | 560 |
embryonic structure | 3.56e-08 | 564 |
developing anatomical structure | 1.49e-07 | 581 |
embryo | 3.61e-07 | 592 |