FFCP PHASE1:Hg19::chr2:208634471..208634492,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7855 | |EntrezGene=7855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4043 | |HGNC=4043 | ||
|TSSclassifier=strong | |||
|UniProt=Q13467 | |UniProt=Q13467 | ||
|association_with_transcript=-184bp_to_ENST00000295417_5end | |association_with_transcript=-184bp_to_ENST00000295417_5end | ||
|cluster_id=chr2:208634471..208634492,- | |||
|coexpression_cluster_id=C2683 | |coexpression_cluster_id=C2683 | ||
|description=CAGE_peak_3_at_FZD5_5end | |description=CAGE_peak_3_at_FZD5_5end | ||
|id=chr2:208634471..208634492,- | |id=chr2:208634471..208634492,- | ||
|ontology_enrichment_celltype=CL:0000066!1.36e-15!254;CL:0000223!2.33e-10!59 | |ontology_enrichment_celltype=CL:0000066!1.36e-15!254;CL:0000223!2.33e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.92e-10;7!CL:0000586;3.92e-10;7!CL:0000182;2.33e-08;12!CL:0002322;4.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.67e-10,58;CL:0000039,4.50e-10,7;CL:0000586,4.50e-10,7;CL:0000182,2.77e-08,12;CL:0002322,4.93e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0001041;5.89e-11;30!UBERON:0009497;2.95e-10;13!UBERON:0004161;5.05e-09;11!UBERON:0003104;1.50e-08;31 | |||
|ontology_enrichment_disease=DOID:305!7.20e-19!106;DOID:0050687!1.85e-16!143;DOID:162!3.37e-10!235;DOID:14566!9.85e-10!239 | |ontology_enrichment_disease=DOID:305!7.20e-19!106;DOID:0050687!1.85e-16!143;DOID:162!3.37e-10!235;DOID:14566!9.85e-10!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.13e-14,106;DOID:0050687,1.74e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.03e-13!129;UBERON:0004185!1.03e-13!129;UBERON:0004119!4.07e-13!169;UBERON:0000925!4.07e-13!169;UBERON:0006595!4.07e-13!169;UBERON:0001007!6.58e-13!155;UBERON:0001555!6.58e-13!155;UBERON:0007026!6.58e-13!155;UBERON:0005177!2.86e-10!107;UBERON:0001041!1.30e-09!98;UBERON:0000077!1.67e-09!130;UBERON:0005911!5.28e-09!82;UBERON:0000466!1.32e-08!126;UBERON:0005409!7.34e-08!35;UBERON:0009569!1.29e-07!113 | |ontology_enrichment_uberon=UBERON:0004921!1.03e-13!129;UBERON:0004185!1.03e-13!129;UBERON:0004119!4.07e-13!169;UBERON:0000925!4.07e-13!169;UBERON:0006595!4.07e-13!169;UBERON:0001007!6.58e-13!155;UBERON:0001555!6.58e-13!155;UBERON:0007026!6.58e-13!155;UBERON:0005177!2.86e-10!107;UBERON:0001041!1.30e-09!98;UBERON:0000077!1.67e-09!130;UBERON:0005911!5.28e-09!82;UBERON:0000466!1.32e-08!126;UBERON:0005409!7.34e-08!35;UBERON:0009569!1.29e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.81e-10;22!UBERON:0002423;2.48e-08;25!UBERON:0000160;4.97e-08;17!UBERON:0002107;5.47e-07;19!UBERON:0006925;5.47e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009856,1.62e-11,26;UBERON:0007499,6.81e-11,25;UBERON:0005177,1.46e-10,101;UBERON:0004921,5.29e-10,118;UBERON:0009854,3.46e-09,23;UBERON:0001007,3.52e-09,145;UBERON:0001555,3.52e-09,145;UBERON:0007026,3.52e-09,145;UBERON:0005409,1.06e-08,25;UBERON:0008835,1.39e-08,22;UBERON:0003894,1.39e-08,22;UBERON:0004119,1.59e-08,160;UBERON:0000925,1.59e-08,160;UBERON:0006595,1.59e-08,160;UBERON:0009497,3.19e-08,25;UBERON:0000015,3.19e-08,25;UBERON:0002423,3.19e-08,25;UBERON:0006235,3.19e-08,25;UBERON:0004161,3.19e-08,25;UBERON:0005911,5.37e-08,82;UBERON:0000160,5.48e-08,17;UBERON:0005172,1.85e-07,54;UBERON:0005173,1.85e-07,54;UBERON:0002107,6.12e-07,19;UBERON:0006925,6.12e-07,19;UBERON:0008836,6.12e-07,19;UBERON:0002417,9.14e-07,60;UBERON:0000916,9.14e-07,60 | |||
|phase1_expression=0.363356758541113,1.71280419112787,0,3.00219895059391,0.893922188854576,0.872338524100369,7.59899634504932,0.631719873426831,1.82829939739887,3.44027511102112,2.09340350391728,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.61560529038394,0.612002073732759,0,1.43117993565528,3.01123735160345,3.01302335027527,0.382067028739756,0.164201178899891,0.314843125254717,0,0.383829398097213,0.154816123316076,0,0.90361775633475,0.369754010166788,0.154934401160603,0.284338464974843,0,0,0.401088894940283,0,0.895661896959697,0.971680998056939,1.28787783817093,0,0,0,0.464858073811369,0,0,0.28769239232215,0.512321413058201,0.236482229888585,0,0,0,0,0,0,0,0,0,0.659702600373432,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0.289648807765598,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.661743720148475,0,0.263504357079378,2.35762335895883,0,1.48313777113772,1.9472843619281,1.0447784237956,1.86141144726411,0.238490624305342,0,0,0,0,0.694281003215189,0.56530794192401,0,0.825354125820202,0.208994966536811,0.258416759169329,0.35576626268671,0.66944122552934,0,0.760272105718513,0,0.735326160691737,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0.183201743930407,1.31780417436063,0,0.872188104285069,0,0,0,1.43418310374407,1.06400514659507,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0.234321431833797,0,0.570471821544449,0.149448680551801,0,0,0.140450806702248,0,0,0.309977343527296,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.966304265816484,0.545492241181669,1.72082757233402,4.63500083292463,8.34937540425357,3.02104251460748,3.62813692553797,6.05570042101508,3.28479623168247,0,0,0,0.464367928031979,0,0.709840800239063,0.674338760312407,0.241011029883482,0.772057809126758,1.08939722046203,0.474541238222193,0.404493924480493,0.588664395376038,0.769494313892781,0.738155454624648,0,0,0,16.478154526838,11.7939266001315,11.2250082269467,0,8.11723694384549,0.171567810298526,0.768251997860379,0,0.502644862058154,0.277765335475589,0.651616610620649,0,0,6.60803308357938,0.117408694235822,0.433099343283221,0.462985512576611,0.570762456703795,0.790204397959275,0,0.738651018262192,0.702012795417713,0.743155811443641,0.93733833986777,0.16798212819886,0.567100388969546,0,0.581267877027924,0.383382679165211,0.492663237895943,0.176096868026452,1.24396869324463,0.288239906833923,0.75745460055828,0.126995788584338,0,0,0,0.411309970813294,0,0,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0,0,3.01354254859276,2.10833939483032,0,0,0,0,0,0.179060963239896,0.224170287987055,0.394061520403854,0.215627574859517,0.256686072559497,0.254094624222463,1.30139853857622,0.773288812777695,2.01019518401218,0,0,0,0.828831026872071,0.24538298343828,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0.496215615637554,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,9.66875596732978,1.00253235151642,0.184161977871793,0.34444334449382,0.182091168006717,0,1.35359883872224,0.770153371044148,1.56869953835371,1.46139224653261,0.527758144464379,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,2.80363900349542,1.66215201785745,2.23874754722178,2.19259876645935,1.5686127061494,0.256450125116389,0.656029291399411,0.325378394664303,4.53380451249978,3.20493126864202,3.30037999682352,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0.170453254832202,0.0890320356467374,0.165284915360978,2.11409074101617,0.893288987462089,1.92199783625545,0,0,0.6970372701606,0,0,0.869932992075073,0,0,0,0.632758849437452,0,0.511795582622668,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0.349934720244983,0.48111056362756,0.670302275535787,0,5.27205284349963,0.43050537267123,0,0.443430153536676,0.459446800413919,0.507447609232169,3.0585488285695,1.13929437434833,0.238231775457789,0,1.29694662238543,1.08006287447623,0,7.05038869441323,0.962479855263359,2.94048259177238,0,0.28853842595289,0.142283686696828,0,0.798317485731266,0,0.846694330895531,0,0.280797178113459,0,0,2.50634477090067,0.169291777801603,0,0,1.70338495076131,0,0,0.223676107892416,0.166849141711909,0.390776190804081,1.39203086947621,1.23087398947712,0.811367035427949,1.6653598399891,1.4098700508785,6.54991891428769,2.63714722689409,0.36408156524854,0,1.70481688083848,0.47748896947538,0.296964680832639,0,0.994147647766298,0.281338832821026,0.111308705022906,0.16480387422676,0,1.19548792950642,1.38141957765574,2.26739473068848,0.306806047506464,0.123084805461069,0,1.70749867179921,1.25314822272926,0,1.08507746200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|short_description=p3@FZD5 | |short_description=p3@FZD5 | ||
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Latest revision as of 19:48, 19 September 2015
Short description: | p3@FZD5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FZD5_5end |
Coexpression cluster: | C2683_pancreatic_colon_choriocarcinoma_hepatocellular_Hepatocyte_Prostate_liver |
Association with transcript: | -184bp_to_ENST00000295417_5end |
EntrezGene: | FZD5 |
HGNC: | 4043 |
UniProt: | Q13467 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.67e-10 | 58 |
germ line cell | 4.50e-10 | 7 |
germ cell | 4.50e-10 | 7 |
hepatocyte | 2.77e-08 | 12 |
embryonic stem cell | 4.93e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
sac | 1.62e-11 | 26 |
epithelial sac | 6.81e-11 | 25 |
trunk region element | 1.46e-10 | 101 |
subdivision of digestive tract | 5.29e-10 | 118 |
digestive tract diverticulum | 3.46e-09 | 23 |
digestive system | 3.52e-09 | 145 |
digestive tract | 3.52e-09 | 145 |
primitive gut | 3.52e-09 | 145 |
gastrointestinal system | 1.06e-08 | 25 |
hepatic diverticulum | 1.39e-08 | 22 |
liver primordium | 1.39e-08 | 22 |
endoderm-derived structure | 1.59e-08 | 160 |
endoderm | 1.59e-08 | 160 |
presumptive endoderm | 1.59e-08 | 160 |
epithelium of foregut-midgut junction | 3.19e-08 | 25 |
anatomical boundary | 3.19e-08 | 25 |
hepatobiliary system | 3.19e-08 | 25 |
foregut-midgut junction | 3.19e-08 | 25 |
septum transversum | 3.19e-08 | 25 |
endo-epithelium | 5.37e-08 | 82 |
intestine | 5.48e-08 | 17 |
abdomen element | 1.85e-07 | 54 |
abdominal segment element | 1.85e-07 | 54 |
liver | 6.12e-07 | 19 |
digestive gland | 6.12e-07 | 19 |
liver bud | 6.12e-07 | 19 |
abdominal segment of trunk | 9.14e-07 | 60 |
abdomen | 9.14e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.13e-14 | 106 |
cell type cancer | 1.74e-10 | 143 |