FFCP PHASE1:Hg19::chr3:187455634..187455651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=604 | |EntrezGene=604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1001 | |HGNC=1001 | ||
|TSSclassifier=strong | |||
|UniProt=C9JL16 | |UniProt=C9JL16 | ||
|association_with_transcript=80bp_to_ENST00000438077_5end | |association_with_transcript=80bp_to_ENST00000438077_5end | ||
|cluster_id=chr3:187455634..187455651,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_7_at_BCL6_5end | |description=CAGE_peak_7_at_BCL6_5end | ||
|id=chr3:187455634..187455651,- | |id=chr3:187455634..187455651,- | ||
|ontology_enrichment_celltype=CL:0002009!2.10e-34!65;CL:0002194!5.86e-34!63;CL:0000576!5.86e-34!63;CL:0000040!5.86e-34!63;CL:0000559!5.86e-34!63;CL:0002057!2.54e-32!42;CL:0000557!2.59e-30!71;CL:0000860!2.03e-29!45;CL:0000839!3.39e-29!70;CL:0000766!3.31e-27!76;CL:0000763!3.33e-15!112;CL:0000049!3.33e-15!112;CL:0002087!2.33e-14!119;CL:0002031!3.73e-14!124;CL:0000738!9.59e-12!140;CL:0002032!4.09e-08!165;CL:0000837!4.09e-08!165;CL:0000988!5.84e-08!182;CL:0000037!2.54e-07!172;CL:0000566!2.54e-07!172 | |ontology_enrichment_celltype=CL:0002009!2.10e-34!65;CL:0002194!5.86e-34!63;CL:0000576!5.86e-34!63;CL:0000040!5.86e-34!63;CL:0000559!5.86e-34!63;CL:0002057!2.54e-32!42;CL:0000557!2.59e-30!71;CL:0000860!2.03e-29!45;CL:0000839!3.39e-29!70;CL:0000766!3.31e-27!76;CL:0000763!3.33e-15!112;CL:0000049!3.33e-15!112;CL:0002087!2.33e-14!119;CL:0002031!3.73e-14!124;CL:0000738!9.59e-12!140;CL:0002032!4.09e-08!165;CL:0000837!4.09e-08!165;CL:0000988!5.84e-08!182;CL:0000037!2.54e-07!172;CL:0000566!2.54e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.61e-75;33!CL:0002057;1.61e-75;33!CL:0000473;1.77e-65;39!CL:0000234;1.77e-65;39!CL:0000576;7.61e-34;48!CL:0000766;2.55e-21;69!CL:0000763;4.86e-12;100!CL:0002087;6.51e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.89e-67,48;CL:0000234,2.89e-67,48;CL:0000860,3.35e-65,42;CL:0002057,3.35e-65,42;CL:0002194,7.64e-53,59;CL:0000576,7.64e-53,59;CL:0000040,7.64e-53,59;CL:0000559,7.64e-53,59;CL:0002009,5.55e-51,61;CL:0000839,8.19e-47,66;CL:0000557,4.71e-46,67;CL:0000766,1.45e-42,72;CL:0000763,7.05e-27,108;CL:0000049,7.05e-27,108;CL:0002087,5.88e-25,115;CL:0002031,1.01e-23,120;CL:0000738,2.27e-20,136;CL:0000988,1.41e-17,177;CL:0002032,1.85e-16,161;CL:0000837,1.85e-16,161;CL:0000037,1.43e-15,168;CL:0000134,6.64e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-48;42!CL:0000049;1.83e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.39e-25!80;UBERON:0002390!1.22e-22!102;UBERON:0003061!1.22e-22!102;UBERON:0001474!1.25e-22!86;UBERON:0002405!9.42e-21!115;UBERON:0002193!2.64e-19!112;UBERON:0004765!2.65e-17!101;UBERON:0001434!2.65e-17!101;UBERON:0003081!9.29e-11!216;UBERON:0002204!4.15e-09!167;UBERON:0007023!1.97e-08!115;UBERON:0002298!2.03e-07!8 | |ontology_enrichment_uberon=UBERON:0002371!2.39e-25!80;UBERON:0002390!1.22e-22!102;UBERON:0003061!1.22e-22!102;UBERON:0001474!1.25e-22!86;UBERON:0002405!9.42e-21!115;UBERON:0002193!2.64e-19!112;UBERON:0004765!2.65e-17!101;UBERON:0001434!2.65e-17!101;UBERON:0003081!9.29e-11!216;UBERON:0002204!4.15e-09!167;UBERON:0007023!1.97e-08!115;UBERON:0002298!2.03e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002135;5.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.25e-40,76;UBERON:0001474,7.62e-37,82;UBERON:0002390,8.79e-36,98;UBERON:0003061,8.79e-36,98;UBERON:0004765,3.58e-33,90;UBERON:0002193,5.05e-32,108;UBERON:0002405,5.89e-32,93;UBERON:0001434,2.12e-29,100;UBERON:0003081,1.52e-17,203;UBERON:0002204,2.74e-17,167;UBERON:0000926,2.38e-09,315;UBERON:0004120,2.38e-09,315;UBERON:0006603,2.38e-09,315;UBERON:0002384,4.48e-07,371;UBERON:0002135,7.40e-07,1 | |||
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| ||
|short_description=p7@BCL6 | |short_description=p7@BCL6 | ||
}} | }} |
Latest revision as of 06:43, 17 September 2015
Short description: | p7@BCL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_BCL6_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 80bp_to_ENST00000438077_5end |
EntrezGene: | BCL6 |
HGNC: | 1001 |
UniProt: | C9JL16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.89e-67 | 48 |
phagocyte | 2.89e-67 | 48 |
classical monocyte | 3.35e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.35e-65 | 42 |
monopoietic cell | 7.64e-53 | 59 |
monocyte | 7.64e-53 | 59 |
monoblast | 7.64e-53 | 59 |
promonocyte | 7.64e-53 | 59 |
macrophage dendritic cell progenitor | 5.55e-51 | 61 |
myeloid lineage restricted progenitor cell | 8.19e-47 | 66 |
granulocyte monocyte progenitor cell | 4.71e-46 | 67 |
myeloid leukocyte | 1.45e-42 | 72 |
myeloid cell | 7.05e-27 | 108 |
common myeloid progenitor | 7.05e-27 | 108 |
nongranular leukocyte | 5.88e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 1.01e-23 | 120 |
leukocyte | 2.27e-20 | 136 |
hematopoietic cell | 1.41e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.85e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-16 | 161 |
hematopoietic stem cell | 1.43e-15 | 168 |
mesenchymal cell | 6.64e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.25e-40 | 76 |
bone element | 7.62e-37 | 82 |
hematopoietic system | 8.79e-36 | 98 |
blood island | 8.79e-36 | 98 |
skeletal element | 3.58e-33 | 90 |
hemolymphoid system | 5.05e-32 | 108 |
immune system | 5.89e-32 | 93 |
skeletal system | 2.12e-29 | 100 |
lateral plate mesoderm | 1.52e-17 | 203 |
musculoskeletal system | 2.74e-17 | 167 |
mesoderm | 2.38e-09 | 315 |
mesoderm-derived structure | 2.38e-09 | 315 |
presumptive mesoderm | 2.38e-09 | 315 |
connective tissue | 4.48e-07 | 371 |
mitral valve | 7.40e-07 | 1 |