FFCP PHASE1:Hg19::chr6:28226984..28227005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387032 | |EntrezGene=387032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13854 | |HGNC=13854 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z7H3 | |UniProt=B7Z7H3 | ||
|association_with_transcript=5bp_to_ENST00000423974,uc011dlb.1_5end | |association_with_transcript=5bp_to_ENST00000423974,uc011dlb.1_5end | ||
|cluster_id=chr6:28226984..28227005,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_ZKSCAN4_5end | |description=CAGE_peak_4_at_ZKSCAN4_5end | ||
|id=chr6:28226984..28227005,- | |id=chr6:28226984..28227005,- | ||
|ontology_enrichment_celltype=CL:0002057!2.77e-40!42;CL:0000860!1.22e-36!45;CL:0002009!9.00e-35!65;CL:0002194!1.81e-34!63;CL:0000576!1.81e-34!63;CL:0000040!1.81e-34!63;CL:0000559!1.81e-34!63;CL:0000557!2.23e-33!71;CL:0000766!2.70e-33!76;CL:0000839!2.54e-32!70;CL:0000738!5.99e-22!140;CL:0002087!2.03e-20!119;CL:0002031!8.87e-20!124;CL:0000763!2.66e-19!112;CL:0000049!2.66e-19!112;CL:0000037!5.17e-15!172;CL:0000566!5.17e-15!172;CL:0000988!6.59e-14!182;CL:0002032!1.72e-13!165;CL:0000837!1.72e-13!165;CL:0002393!4.81e-09!9;CL:0002397!4.81e-09!9;CL:0000134!1.32e-07!358;CL:0002320!1.78e-07!365 | |ontology_enrichment_celltype=CL:0002057!2.77e-40!42;CL:0000860!1.22e-36!45;CL:0002009!9.00e-35!65;CL:0002194!1.81e-34!63;CL:0000576!1.81e-34!63;CL:0000040!1.81e-34!63;CL:0000559!1.81e-34!63;CL:0000557!2.23e-33!71;CL:0000766!2.70e-33!76;CL:0000839!2.54e-32!70;CL:0000738!5.99e-22!140;CL:0002087!2.03e-20!119;CL:0002031!8.87e-20!124;CL:0000763!2.66e-19!112;CL:0000049!2.66e-19!112;CL:0000037!5.17e-15!172;CL:0000566!5.17e-15!172;CL:0000988!6.59e-14!182;CL:0002032!1.72e-13!165;CL:0000837!1.72e-13!165;CL:0002393!4.81e-09!9;CL:0002397!4.81e-09!9;CL:0000134!1.32e-07!358;CL:0002320!1.78e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.98e-76;33!CL:0002057;3.98e-76;33!CL:0000473;1.22e-56;39!CL:0000234;1.22e-56;39!CL:0000576;1.15e-35;48!CL:0000766;9.66e-22;69!CL:0002087;5.97e-12;104!CL:0000763;2.62e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.97e-63,42;CL:0002057,1.97e-63,42;CL:0000473,1.65e-60,48;CL:0000234,1.65e-60,48;CL:0002194,1.45e-47,59;CL:0000576,1.45e-47,59;CL:0000040,1.45e-47,59;CL:0000559,1.45e-47,59;CL:0002009,6.80e-46,61;CL:0000839,3.75e-42,66;CL:0000557,1.81e-41,67;CL:0000766,2.45e-38,72;CL:0002087,2.22e-27,115;CL:0002031,4.65e-26,120;CL:0000763,2.96e-24,108;CL:0000049,2.96e-24,108;CL:0000738,1.77e-22,136;CL:0002032,2.71e-18,161;CL:0000837,2.71e-18,161;CL:0000037,2.42e-17,168;CL:0000988,3.13e-16,177;CL:0000134,2.11e-07,354;CL:0002320,3.68e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.84e-45;42!CL:0000049;2.92e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.55e-32!80;UBERON:0001474!7.66e-29!86;UBERON:0002390!8.85e-29!102;UBERON:0003061!8.85e-29!102;UBERON:0002193!1.41e-25!112;UBERON:0004765!4.86e-23!101;UBERON:0001434!4.86e-23!101;UBERON:0002405!5.16e-20!115;UBERON:0002204!6.08e-17!167;UBERON:0003081!1.03e-11!216;UBERON:0002780!4.63e-08!41;UBERON:0001890!4.63e-08!41;UBERON:0006240!4.63e-08!41;UBERON:0003080!9.62e-08!42;UBERON:0002616!1.03e-07!59;UBERON:0001049!1.72e-07!57;UBERON:0005068!1.72e-07!57;UBERON:0006241!1.72e-07!57;UBERON:0007135!1.72e-07!57 | |ontology_enrichment_uberon=UBERON:0002371!2.55e-32!80;UBERON:0001474!7.66e-29!86;UBERON:0002390!8.85e-29!102;UBERON:0003061!8.85e-29!102;UBERON:0002193!1.41e-25!112;UBERON:0004765!4.86e-23!101;UBERON:0001434!4.86e-23!101;UBERON:0002405!5.16e-20!115;UBERON:0002204!6.08e-17!167;UBERON:0003081!1.03e-11!216;UBERON:0002780!4.63e-08!41;UBERON:0001890!4.63e-08!41;UBERON:0006240!4.63e-08!41;UBERON:0003080!9.62e-08!42;UBERON:0002616!1.03e-07!59;UBERON:0001049!1.72e-07!57;UBERON:0005068!1.72e-07!57;UBERON:0006241!1.72e-07!57;UBERON:0007135!1.72e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.41e-40,76;UBERON:0001474,1.47e-36,82;UBERON:0004765,5.87e-33,90;UBERON:0002390,8.71e-33,98;UBERON:0003061,8.71e-33,98;UBERON:0002405,9.17e-32,93;UBERON:0002193,2.33e-29,108;UBERON:0001434,2.96e-29,100;UBERON:0002204,8.50e-16,167;UBERON:0003081,1.58e-13,203;UBERON:0000926,5.99e-09,315;UBERON:0004120,5.99e-09,315;UBERON:0006603,5.99e-09,315;UBERON:0002384,7.84e-07,371 | |||
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| ||
|short_description=p4@ZKSCAN4 | |short_description=p4@ZKSCAN4 | ||
}} | }} |
Latest revision as of 12:01, 17 September 2015
Short description: | p4@ZKSCAN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZKSCAN4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 5bp_to_ENST00000423974, uc011dlb.1_5end |
EntrezGene: | ZKSCAN4 |
HGNC: | 13854 |
UniProt: | B7Z7H3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.97e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.97e-63 | 42 |
defensive cell | 1.65e-60 | 48 |
phagocyte | 1.65e-60 | 48 |
monopoietic cell | 1.45e-47 | 59 |
monocyte | 1.45e-47 | 59 |
monoblast | 1.45e-47 | 59 |
promonocyte | 1.45e-47 | 59 |
macrophage dendritic cell progenitor | 6.80e-46 | 61 |
myeloid lineage restricted progenitor cell | 3.75e-42 | 66 |
granulocyte monocyte progenitor cell | 1.81e-41 | 67 |
myeloid leukocyte | 2.45e-38 | 72 |
nongranular leukocyte | 2.22e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 4.65e-26 | 120 |
myeloid cell | 2.96e-24 | 108 |
common myeloid progenitor | 2.96e-24 | 108 |
leukocyte | 1.77e-22 | 136 |
hematopoietic oligopotent progenitor cell | 2.71e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.71e-18 | 161 |
hematopoietic stem cell | 2.42e-17 | 168 |
hematopoietic cell | 3.13e-16 | 177 |
mesenchymal cell | 2.11e-07 | 354 |
connective tissue cell | 3.68e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.41e-40 | 76 |
bone element | 1.47e-36 | 82 |
skeletal element | 5.87e-33 | 90 |
hematopoietic system | 8.71e-33 | 98 |
blood island | 8.71e-33 | 98 |
immune system | 9.17e-32 | 93 |
hemolymphoid system | 2.33e-29 | 108 |
skeletal system | 2.96e-29 | 100 |
musculoskeletal system | 8.50e-16 | 167 |
lateral plate mesoderm | 1.58e-13 | 203 |
mesoderm | 5.99e-09 | 315 |
mesoderm-derived structure | 5.99e-09 | 315 |
presumptive mesoderm | 5.99e-09 | 315 |
connective tissue | 7.84e-07 | 371 |