FFCP PHASE1:Hg19::chr6:33043729..33043782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3115 | |EntrezGene=3115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4940 | |HGNC=4940 | ||
|TSSclassifier=strong | |||
|UniProt=A2BEU2,E7EQF5,F5H135,P04440 | |UniProt=A2BEU2,E7EQF5,F5H135,P04440 | ||
|association_with_transcript=0bp_to_ENST00000411942,ENST00000422592,ENST00000535465,uc003ocu.1,uc011dqn.1,uc011dqo.1,uc011dqp.1_5end | |association_with_transcript=0bp_to_ENST00000411942,ENST00000422592,ENST00000535465,uc003ocu.1,uc011dqn.1,uc011dqo.1,uc011dqp.1_5end | ||
|cluster_id=chr6:33043729..33043782,+ | |||
|coexpression_cluster_id=C187 | |coexpression_cluster_id=C187 | ||
|description=CAGE_peak_1_at_HLA-DPB1_5end | |description=CAGE_peak_1_at_HLA-DPB1_5end | ||
|id=chr6:33043729..33043782,+ | |id=chr6:33043729..33043782,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.38e-58!140;CL:0000037!1.17e-53!172;CL:0000566!1.17e-53!172;CL:0002087!2.10e-52!119;CL:0002031!7.20e-51!124;CL:0002032!1.46e-50!165;CL:0000837!1.46e-50!165;CL:0000988!6.23e-50!182;CL:0002009!4.96e-32!65;CL:0000557!1.55e-31!71;CL:0000766!2.59e-31!76;CL:0002194!1.75e-30!63;CL:0000576!1.75e-30!63;CL:0000040!1.75e-30!63;CL:0000559!1.75e-30!63;CL:0000839!2.65e-29!70;CL:0000763!2.87e-29!112;CL:0000049!2.87e-29!112;CL:0002057!3.06e-28!42;CL:0000860!3.29e-25!45;CL:0000542!5.62e-19!53;CL:0000051!5.62e-19!53;CL:0000838!1.38e-18!52;CL:0000945!2.71e-14!24;CL:0000826!2.71e-14!24;CL:0000236!1.08e-10!14;CL:0000451!2.25e-09!10;CL:0000990!3.63e-08!8;CL:0002393!4.85e-07!9;CL:0002397!4.85e-07!9;CL:0000134!5.82e-07!358 | |ontology_enrichment_celltype=CL:0000738!1.38e-58!140;CL:0000037!1.17e-53!172;CL:0000566!1.17e-53!172;CL:0002087!2.10e-52!119;CL:0002031!7.20e-51!124;CL:0002032!1.46e-50!165;CL:0000837!1.46e-50!165;CL:0000988!6.23e-50!182;CL:0002009!4.96e-32!65;CL:0000557!1.55e-31!71;CL:0000766!2.59e-31!76;CL:0002194!1.75e-30!63;CL:0000576!1.75e-30!63;CL:0000040!1.75e-30!63;CL:0000559!1.75e-30!63;CL:0000839!2.65e-29!70;CL:0000763!2.87e-29!112;CL:0000049!2.87e-29!112;CL:0002057!3.06e-28!42;CL:0000860!3.29e-25!45;CL:0000542!5.62e-19!53;CL:0000051!5.62e-19!53;CL:0000838!1.38e-18!52;CL:0000945!2.71e-14!24;CL:0000826!2.71e-14!24;CL:0000236!1.08e-10!14;CL:0000451!2.25e-09!10;CL:0000990!3.63e-08!8;CL:0002393!4.85e-07!9;CL:0002397!4.85e-07!9;CL:0000134!5.82e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-22;33!CL:0002057;1.05e-22;33!CL:0000473;1.89e-22;39!CL:0000234;1.89e-22;39!CL:0000576;1.03e-19;48!CL:0002087;1.21e-16;104!CL:0000945;1.08e-15;24!CL:0000766;2.35e-14;69!CL:0000738;7.87e-14;136!CL:0000542;5.52e-13;53!CL:0000236;3.59e-11;13!CL:0000451;3.13e-10;10!CL:0000988;2.11e-09;177!CL:0000990;6.84e-09;8!CL:0000763;7.71e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.40e-65,136;CL:0002087,5.09e-60,115;CL:0000037,6.14e-58,168;CL:0002031,2.45e-56,120;CL:0000988,2.85e-55,177;CL:0002032,2.08e-54,161;CL:0000837,2.08e-54,161;CL:0002009,2.63e-37,61;CL:0002194,1.49e-35,59;CL:0000576,1.49e-35,59;CL:0000040,1.49e-35,59;CL:0000559,1.49e-35,59;CL:0000473,2.36e-35,48;CL:0000234,2.36e-35,48;CL:0000557,2.66e-35,67;CL:0000766,3.18e-34,72;CL:0000839,3.66e-32,66;CL:0000860,3.56e-31,42;CL:0002057,3.56e-31,42;CL:0000763,1.15e-30,108;CL:0000049,1.15e-30,108;CL:0000542,3.07e-21,53;CL:0000051,3.07e-21,53;CL:0000838,8.36e-21,52;CL:0000945,1.09e-15,24;CL:0000826,1.09e-15,24;CL:0000236,1.08e-11,14;CL:0000451,3.14e-10,10;CL:0000990,6.84e-09,8;CL:0000134,1.02e-07,354;CL:0002393,1.21e-07,9;CL:0002397,1.21e-07,9;CL:0002320,8.09e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.46e-22;42!CL:0000051;5.52e-13;53!CL:0000049;3.27e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.95e-40!102;UBERON:0003061!3.95e-40!102;UBERON:0002193!1.06e-34!112;UBERON:0007023!1.78e-32!115;UBERON:0002371!2.02e-29!80;UBERON:0001474!9.71e-25!86;UBERON:0002405!4.51e-22!115;UBERON:0004765!9.95e-20!101;UBERON:0001434!9.95e-20!101;UBERON:0001049!5.37e-11!57;UBERON:0005068!5.37e-11!57;UBERON:0006241!5.37e-11!57;UBERON:0007135!5.37e-11!57;UBERON:0000178!1.39e-08!15;UBERON:0000179!1.39e-08!15;UBERON:0000463!1.39e-08!15;UBERON:0003080!2.21e-08!42;UBERON:0002616!3.30e-08!59;UBERON:0002780!3.59e-08!41;UBERON:0001890!3.59e-08!41;UBERON:0006240!3.59e-08!41;UBERON:0001017!2.33e-07!82;UBERON:0005743!9.91e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!3.95e-40!102;UBERON:0003061!3.95e-40!102;UBERON:0002193!1.06e-34!112;UBERON:0007023!1.78e-32!115;UBERON:0002371!2.02e-29!80;UBERON:0001474!9.71e-25!86;UBERON:0002405!4.51e-22!115;UBERON:0004765!9.95e-20!101;UBERON:0001434!9.95e-20!101;UBERON:0001049!5.37e-11!57;UBERON:0005068!5.37e-11!57;UBERON:0006241!5.37e-11!57;UBERON:0007135!5.37e-11!57;UBERON:0000178!1.39e-08!15;UBERON:0000179!1.39e-08!15;UBERON:0000463!1.39e-08!15;UBERON:0003080!2.21e-08!42;UBERON:0002616!3.30e-08!59;UBERON:0002780!3.59e-08!41;UBERON:0001890!3.59e-08!41;UBERON:0006240!3.59e-08!41;UBERON:0001017!2.33e-07!82;UBERON:0005743!9.91e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.56e-09;114!UBERON:0000178;2.38e-09;15!UBERON:0000179;2.38e-09;15!UBERON:0000463;2.38e-09;15!UBERON:0002390;2.79e-08;32 | |||
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| ||
|short_description=p1@HLA-DPB1 | |short_description=p1@HLA-DPB1 | ||
}} | }} |
Latest revision as of 05:35, 18 September 2015
Short description: | p1@HLA-DPB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HLA-DPB1_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 0bp_to_ENST00000411942, ENST00000422592, ENST00000535465, uc003ocu.1, uc011dqn.1, uc011dqo.1, uc011dqp.1_5end |
EntrezGene: | HLA-DPB1 |
HGNC: | 4940 |
UniProt: | A2BEU2E7EQF5F5H135P04440 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.96e-45 | 98 |
blood island | 4.96e-45 | 98 |
hemolymphoid system | 1.09e-39 | 108 |
adult organism | 3.22e-35 | 114 |
bone marrow | 4.11e-33 | 76 |
immune system | 3.57e-31 | 93 |
bone element | 2.44e-28 | 82 |
skeletal element | 4.36e-23 | 90 |
skeletal system | 3.90e-19 | 100 |
lateral plate mesoderm | 4.11e-11 | 203 |
neural tube | 1.13e-10 | 56 |
neural rod | 1.13e-10 | 56 |
future spinal cord | 1.13e-10 | 56 |
neural keel | 1.13e-10 | 56 |
regional part of nervous system | 9.38e-10 | 53 |
regional part of brain | 9.38e-10 | 53 |
blood | 2.35e-09 | 15 |
haemolymphatic fluid | 2.35e-09 | 15 |
organism substance | 2.35e-09 | 15 |
regional part of forebrain | 9.75e-08 | 41 |
forebrain | 9.75e-08 | 41 |
anterior neural tube | 9.75e-08 | 41 |
future forebrain | 9.75e-08 | 41 |