FFCP PHASE1:Hg19::chr6:88428781..88428805,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:88428781..88428805,- | |||
|coexpression_cluster_id=C475 | |coexpression_cluster_id=C475 | ||
|description=CAGE_peak_at_chr6:88428781..88428805,- | |description=CAGE_peak_at_chr6:88428781..88428805,- | ||
|id=chr6:88428781..88428805,- | |id=chr6:88428781..88428805,- | ||
|ontology_enrichment_celltype=CL:0002057!2.28e-105!42;CL:0000860!1.48e-97!45;CL:0000766!3.12e-84!76;CL:0002194!9.61e-72!63;CL:0000576!9.61e-72!63;CL:0000040!9.61e-72!63;CL:0000559!9.61e-72!63;CL:0002009!3.35e-69!65;CL:0000839!1.65e-66!70;CL:0000557!2.06e-65!71;CL:0000738!3.88e-60!140;CL:0000763!4.84e-53!112;CL:0000049!4.84e-53!112;CL:0002087!1.25e-52!119;CL:0000037!3.12e-46!172;CL:0000566!3.12e-46!172;CL:0002031!1.99e-45!124;CL:0002032!4.44e-43!165;CL:0000837!4.44e-43!165;CL:0000988!6.94e-43!182;CL:0002393!2.79e-25!9;CL:0002397!2.79e-25!9;CL:0000134!5.34e-17!358;CL:0000094!7.38e-17!8;CL:0002320!2.21e-16!365;CL:0000219!3.28e-14!390;CL:0000034!3.74e-12!444;CL:0000081!6.13e-12!11;CL:0000048!1.27e-11!430;CL:0000723!2.95e-11!436;CL:0000767!5.77e-10!3;CL:0000875!1.81e-09!3;CL:0002396!1.81e-09!3;CL:0000842!5.96e-09!3;CL:0000775!7.81e-09!3;CL:0000224!8.46e-07!4 | |ontology_enrichment_celltype=CL:0002057!2.28e-105!42;CL:0000860!1.48e-97!45;CL:0000766!3.12e-84!76;CL:0002194!9.61e-72!63;CL:0000576!9.61e-72!63;CL:0000040!9.61e-72!63;CL:0000559!9.61e-72!63;CL:0002009!3.35e-69!65;CL:0000839!1.65e-66!70;CL:0000557!2.06e-65!71;CL:0000738!3.88e-60!140;CL:0000763!4.84e-53!112;CL:0000049!4.84e-53!112;CL:0002087!1.25e-52!119;CL:0000037!3.12e-46!172;CL:0000566!3.12e-46!172;CL:0002031!1.99e-45!124;CL:0002032!4.44e-43!165;CL:0000837!4.44e-43!165;CL:0000988!6.94e-43!182;CL:0002393!2.79e-25!9;CL:0002397!2.79e-25!9;CL:0000134!5.34e-17!358;CL:0000094!7.38e-17!8;CL:0002320!2.21e-16!365;CL:0000219!3.28e-14!390;CL:0000034!3.74e-12!444;CL:0000081!6.13e-12!11;CL:0000048!1.27e-11!430;CL:0000723!2.95e-11!436;CL:0000767!5.77e-10!3;CL:0000875!1.81e-09!3;CL:0002396!1.81e-09!3;CL:0000842!5.96e-09!3;CL:0000775!7.81e-09!3;CL:0000224!8.46e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.35e-79;33!CL:0002057;3.35e-79;33!CL:0000576;9.02e-63;48!CL:0000473;6.87e-56;39!CL:0000234;6.87e-56;39!CL:0000766;9.28e-52;69!CL:0002393;2.23e-27;6!CL:0002397;2.23e-27;6!CL:0000094;6.36e-20;8!CL:0002087;3.40e-19;104!CL:0000763;7.53e-19;100!CL:0000767;3.65e-15;3!CL:0000081;2.50e-14;11!CL:0000875;2.91e-14;3!CL:0002396;2.91e-14;3!CL:0000226;1.69e-13;3!CL:0000842;1.69e-13;3!CL:0000738;9.60e-12;136!CL:0000988;2.79e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.37e-125,42;CL:0002057,3.37e-125,42;CL:0000473,1.29e-108,48;CL:0000234,1.29e-108,48;CL:0000766,9.15e-97,72;CL:0002194,2.17e-85,59;CL:0000576,2.17e-85,59;CL:0000040,2.17e-85,59;CL:0000559,2.17e-85,59;CL:0002009,2.15e-82,61;CL:0000839,1.11e-75,66;CL:0000557,1.86e-74,67;CL:0000763,3.74e-62,108;CL:0000049,3.74e-62,108;CL:0000738,6.47e-56,136;CL:0002087,1.51e-48,115;CL:0000037,9.06e-44,168;CL:0000988,3.88e-41,177;CL:0002393,5.90e-40,9;CL:0002397,5.90e-40,9;CL:0002032,3.70e-39,161;CL:0000837,3.70e-39,161;CL:0002031,1.63e-38,120;CL:0000094,6.05e-20,8;CL:0000134,2.01e-16,354;CL:0002320,6.13e-16,361;CL:0000767,3.92e-15,3;CL:0000081,2.41e-14,11;CL:0000875,2.48e-14,3;CL:0002396,2.48e-14,3;CL:0000219,3.10e-14,386;CL:0000226,1.69e-13,3;CL:0000842,1.69e-13,3;CL:0000034,2.32e-12,441;CL:0000048,3.79e-12,427;CL:0000723,7.37e-12,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.05e-91;42!CL:0000049;6.60e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.48e-58!102;UBERON:0003061!2.48e-58!102;UBERON:0002371!8.91e-57!80;UBERON:0001474!5.16e-52!86;UBERON:0002193!5.72e-52!112;UBERON:0004765!1.45e-42!101;UBERON:0001434!1.45e-42!101;UBERON:0002405!1.59e-41!115;UBERON:0003081!9.26e-22!216;UBERON:0002204!3.79e-21!167;UBERON:0002384!1.53e-15!375 | |ontology_enrichment_uberon=UBERON:0002390!2.48e-58!102;UBERON:0003061!2.48e-58!102;UBERON:0002371!8.91e-57!80;UBERON:0001474!5.16e-52!86;UBERON:0002193!5.72e-52!112;UBERON:0004765!1.45e-42!101;UBERON:0001434!1.45e-42!101;UBERON:0002405!1.59e-41!115;UBERON:0003081!9.26e-22!216;UBERON:0002204!3.79e-21!167;UBERON:0002384!1.53e-15!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.16e-65,76;UBERON:0001474,1.24e-59,82;UBERON:0002390,3.06e-58,98;UBERON:0003061,3.06e-58,98;UBERON:0004765,1.01e-53,90;UBERON:0002193,3.58e-52,108;UBERON:0002405,9.11e-52,93;UBERON:0001434,1.19e-47,100;UBERON:0002204,1.35e-25,167;UBERON:0003081,3.66e-24,203;UBERON:0002384,2.80e-15,371;UBERON:0000926,9.74e-13,315;UBERON:0004120,9.74e-13,315;UBERON:0006603,9.74e-13,315 | |||
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|short_description=p@chr6:88428781..88428805,- | |short_description=p@chr6:88428781..88428805,- | ||
}} | }} |
Latest revision as of 03:40, 31 July 2015
Short description: | p@chr6:88428781..88428805, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:88428781..88428805, - |
Coexpression cluster: | C475_CD14_Basophils_CD14CD16_Peripheral_CD133_large_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.16e-65 | 76 |
bone element | 1.24e-59 | 82 |
hematopoietic system | 3.06e-58 | 98 |
blood island | 3.06e-58 | 98 |
skeletal element | 1.01e-53 | 90 |
hemolymphoid system | 3.58e-52 | 108 |
immune system | 9.11e-52 | 93 |
skeletal system | 1.19e-47 | 100 |
musculoskeletal system | 1.35e-25 | 167 |
lateral plate mesoderm | 3.66e-24 | 203 |
connective tissue | 2.80e-15 | 371 |
mesoderm | 9.74e-13 | 315 |
mesoderm-derived structure | 9.74e-13 | 315 |
presumptive mesoderm | 9.74e-13 | 315 |