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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005621
|accession_numbers=CAGE;DRX007920;DRR008792;DRZ000217;DRZ001602;DRZ011567;DRZ012952
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:1115
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:1115
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100400,FF:0103744
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr12:124873852..124873881,-!p3@NCOR2!1.87!416.09!NCOR2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.84!68.33!HOXC5;;chr2:176969228..176969260,+!p1@HOXD11!1.75!55.55!HOXD11;;chr1:170632285..170632309,+!p1@PRRX1!1.66!50.26!PRRX1;;chr12:124873357..124873401,-!p1@NCOR2!1.64!470.95!NCOR2;;chr6:45296048..45296082,+!p1@RUNX2!1.55!39.02!RUNX2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.54!33.57!ZBED1;;chr1:197886461..197886558,+!p1@LHX9!1.51!31.52!LHX9;;chr2:176969179..176969226,+!p2@HOXD11!1.50!30.33!HOXD11;;chr6:134210243..134210257,+!p1@TCF21!1.47!28.45!TCF21;;chr8:25902876..25902936,-!p1@EBF2!1.44!26.58!EBF2;;chr7:27192185..27192209,-!p1@HOXA3!1.33!20.62!HOXA3;;chr15:42749722..42749739,-!p2@ZFP106!1.31!34.76!ZFP106;;chr8:40755333..40755352,-!p1@ZMAT4!1.28!18.23!ZMAT4;;chr17:46682321..46682362,-!p1@HOXB6!1.26!17.04!HOXB6;;chr2:119605214..119605230,-!p1@EN1!1.26!17.04!EN1;;chr10:8096772..8096787,+!p2@GATA3!1.24!19.42!GATA3;;chr11:46299199..46299233,+!p1@CREB3L1!1.23!81.79!CREB3L1;;chr17:46690839..46690884,-!p1@HOXB8!1.23!15.85!HOXB8;;chr4:111558135..111558198,-!p2@PITX2!1.20!14.99!PITX2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.19!14.48!HOXC5;;chr21:36421535..36421610,-!p2@RUNX1!1.18!49.58!RUNX1;;chr12:124873824..124873833,-!p19@NCOR2!1.18!13.97!NCOR2;;chr13:74708029..74708077,-!p2@KLF12!1.15!37.66!KLF12;;chr6:10415276..10415341,-!p2@TFAP2A!1.14!15.85!TFAP2A;;chr8:49833978..49833996,-!p1@SNAI2!1.09!231.22!SNAI2;;chr10:8096631..8096660,+!p1@GATA3!1.09!13.63!GATA3;;chr7:27205136..27205164,-!p1@HOXA9!1.09!11.42!HOXA9;;chr1:170632250..170632277,+!p7@PRRX1!1.09!11.42!PRRX1;;chr8:49833948..49833973,-!p2@SNAI2!1.08!70.88!SNAI2;;chr7:27224842..27224872,-!p1@HOXA11!1.08!10.90!HOXA11;;chr6:10412600..10412637,-!p1@TFAP2A!1.07!17.89!TFAP2A;;chr12:54402745..54402788,+!p1@HOXC8!1.07!10.73!HOXC8;;chr11:46299539..46299620,+!p2@CREB3L1!1.04!17.04!CREB3L1;;chr16:86600426..86600441,+!p1@FOXC2!1.02!23.51!FOXC2;;chr1:170633348..170633399,+!p2@PRRX1!1.02!13.12!PRRX1;;chr3:147111198..147111225,+!p4@ZIC1!1.00!9.03!ZIC1;;chr12:115122318..115122331,-!p2@TBX3!0.99!8.69!TBX3;;chr7:35293685..35293718,-!p1@TBX20!0.98!8.52!TBX20;;chr2:200322654..200322707,-!p2@SATB2!0.97!12.27!SATB2;;chr3:157823517..157823562,-!p1@SHOX2!0.97!8.86!SHOX2;;chr2:176969097..176969109,+!p3@HOXD11!0.97!8.35!HOXD11;;chr12:54393880..54393962,+!p1@HOXC9!0.97!8.35!HOXC9;;chr8:106330656..106330684,+!p1@ZFPM2!0.95!21.47!ZFPM2;;chr15:57511609..57511651,+!p2@TCF12!0.95!13.46!TCF12;;chr1:170633262..170633285,+!p3@PRRX1!0.95!9.20!PRRX1;;chr2:176969124..176969155,+!p5@HOXD11!0.95!8.01!HOXD11;;chr17:46688334..46688385,-!p1@HOXB7!0.94!11.42!HOXB7;;chr3:71630980..71631110,-!p3@FOXP1!0.93!27.09!FOXP1;;chr10:131762504..131762555,-!p1@EBF3!0.93!7.50!EBF3;;chr17:46691732..46691766,-!p4@HOXB8!0.93!7.50!HOXB8;;chr6:28321971..28321995,-!p1@ZNF323!0.93!7.50!ZNF323;;chr17:46687959..46688007,-!p2@HOXB7!0.92!10.39!HOXB7;;chr15:96869255..96869291,+!p6@NR2F2!0.91!13.29!NR2F2;;chr16:86544113..86544145,+!p1@FOXF1!0.91!8.86!FOXF1;;chr2:176994408..176994492,+!p1@HOXD8!0.91!7.16!HOXD8;;chr2:45236540..45236577,-!p1@SIX2!0.91!7.16!SIX2;;chr7:27153454..27153469,-!p2@HOXA3!0.91!7.16!HOXA3;;chr12:54402790..54402805,+!p2@HOXC8!0.90!6.99!HOXC8;;chr12:115121962..115121987,-!p1@TBX3!0.89!60.15!TBX3;;chr3:147127142..147127168,+!p1@ZIC1!0.89!6.82!ZIC1;;chr5:72744594..72744609,-!p1@FOXD1!0.88!31.69!FOXD1;;chr2:19558373..19558392,-!p1@OSR1!0.88!18.74!OSR1;;chr16:54320617..54320643,-!p3@IRX3!0.87!8.35!IRX3;;chr3:147111231..147111281,+!p3@ZIC1!0.87!6.47!ZIC1;;chr7:19157248..19157268,-!p1@TWIST1!0.86!18.23!TWIST1;;chr17:46622070..46622109,-!p1@HOXB2!0.86!14.48!HOXB2;;chr7:27205106..27205134,-!p2@HOXA9!0.86!6.30!HOXA9;;chr1:170632959..170632987,+!p4@PRRX1!0.85!6.82!PRRX1;;chr2:200323414..200323455,-!p1@SATB2!0.84!13.29!SATB2;;chr19:1592828..1592910,-!p2@MBD3!0.83!48.90!MBD3;;chr2:71127699..71127744,+!p1@VAX2!0.83!12.44!VAX2;;chr17:46622114..46622138,-!p4@HOXB2!0.83!9.03!HOXB2;;chr2:119604456..119604501,-!p2@EN1!0.82!5.62!EN1;;chr12:80085255..80085284,-!p9@PAWR!0.81!8.18!PAWR;;chr10:8095593..8095625,+!p3@GATA3!0.81!6.47!GATA3;;chr7:27142290..27142310,-!p1@HOXA2!0.79!5.11!HOXA2;;chr6:144329384..144329405,-!p1@PLAGL1!0.77!62.02!PLAGL1;;chr19:4066803..4066886,-!p1@ZBTB7A!0.77!57.93!ZBTB7A;;chr8:77593474..77593612,+!p1@ZFHX4!0.77!22.49!ZFHX4;;chr17:59477233..59477263,+!p1@TBX2!0.77!16.53!TBX2;;chr7:27196267..27196311,-!p1@HOXA7!0.77!4.94!HOXA7;;chr7:19157043..19157088,-!p2@TWIST1!0.76!12.95!TWIST1;;chr3:178789522..178789564,-!p2@ZMAT3!0.75!37.66!ZMAT3;;chr5:72744445..72744466,-!p2@FOXD1!0.75!8.18!FOXD1;;chr1:151032860..151032918,+!p1@MLLT11!0.74!59.81!MLLT11;;chr19:4067039..4067064,-!p3@ZBTB7A!0.74!14.31!ZBTB7A;;chr19:31840130..31840160,-!p2@TSHZ3!0.74!7.33!TSHZ3;;chr16:54320158..54320200,-!p5@IRX3!0.74!6.82!IRX3;;chr2:66662281..66662308,+!p1@MEIS1!0.73!16.53!MEIS1;;chr8:67525443..67525459,-!p2@MYBL1!0.73!6.82!MYBL1;;chr9:16870659..16870675,-!p2@BNC2!0.73!5.45!BNC2;;chr5:139492456..139492489,+!p7@PURA!0.73!4.43!PURA;;chr1:119530493..119530572,-!p1@TBX15!0.73!4.43!TBX15;;chr1:170632477..170632506,+!p6@PRRX1!0.73!4.43!PRRX1;;chr2:172949484..172949522,+!p1@DLX1!0.73!4.43!DLX1;;chr19:4065485..4065546,-!p2@ZBTB7A!0.72!42.26!ZBTB7A;;chr11:65686732..65686756,+!p2@DRAP1!0.72!19.94!DRAP1;;chr11:65687222..65687240,+!p7@DRAP1!0.72!5.62!DRAP1;;chr13:74707894..74707947,-!p6@KLF12!0.72!4.77!KLF12;;chr11:125034640..125034655,+!p1@PKNOX2!0.72!4.26!PKNOX2;;chr7:27224795..27224840,-!p2@HOXA11!0.72!4.26!HOXA11;;chr6:45390025..45390076,+!p2@RUNX2!0.71!10.73!RUNX2;;chr11:65686802..65686818,+!p6@DRAP1!0.71!7.67!DRAP1;;chr21:36259445..36259519,-!p4@RUNX1!0.70!12.27!RUNX1;;chr12:124827609..124827643,-!p9@NCOR2!0.69!5.96!NCOR2;;chr15:96869292..96869320,+!p15@NR2F2!0.69!5.96!NR2F2;;chr7:27195867..27195893,-!p3@HOXA7!0.69!3.92!HOXA7;;chr12:69753448..69753577,+!p1@YEATS4!0.68!87.07!YEATS4;;chr19:50529247..50529296,+!p1@ZNF473!0.68!28.11!ZNF473;;chr2:121493425..121493474,+!p1@GLI2!0.68!9.20!GLI2;;chr2:74730430..74730451,-!p1@LBX2!0.68!6.65!LBX2;;chr19:4066890..4066903,-!p6@ZBTB7A!0.68!6.47!ZBTB7A;;chr12:54402729..54402743,+!p3@HOXC8!0.68!3.75!HOXC8;;chr7:27196217..27196246,-!p2@HOXA7!0.68!3.75!HOXA7;;chr19:1592714..1592762,-!p1@MBD3!0.67!32.03!MBD3;;chr7:150946015..150946070,-!p3@SMARCD3!0.67!8.69!SMARCD3;;chr17:46622205..46622218,-!p3@HOXB2!0.66!4.26!HOXB2;;chr1:170632723..170632739,+!p8@PRRX1!0.66!3.58!PRRX1;;chr21:36421347..36421380,-!p8@RUNX1!0.66!3.58!RUNX1;;chr11:46299443..46299459,+!p4@CREB3L1!0.66!3.58!CREB3L1;;chr2:102091566..102091581,-!p1@RFX8!0.66!3.58!RFX8;;chr2:172950227..172950249,+!p2@DLX1!0.66!3.58!DLX1;;chr5:321810..321877,+!p1@AHRR!0.65!12.61!AHRR;;chr7:4815238..4815327,+!p1@KIAA0415!0.64!87.58!AP5Z1;;chr12:122516646..122516668,+!p1@MLXIP!0.64!53.84!MLXIP;;chr13:74708269..74708291,-!p7@KLF12!0.64!4.77!KLF12;;chr12:115122303..115122314,-!p6@TBX3!0.64!3.41!TBX3;;chr3:147127177..147127194,+!p2@ZIC1!0.64!3.41!ZIC1;;chr17:45928443..45928473,-!p2@SP6!0.64!3.41!SP6;;chr1:170632683..170632696,+!p12@PRRX1!0.64!3.41!PRRX1;;chr14:90085458..90085557,-!p1@FOXN3!0.63!40.21!FOXN3;;chr18:53257027..53257052,-!p3@TCF4!0.63!15.16!TCF4;;chr11:706938..707008,-!p3@DEAF1!0.63!4.26!DEAF1;;chr13:74708246..74708264,-!p8@KLF12!0.63!3.75!KLF12;;chr9:16728327..16728338,-!p5@BNC2!0.63!3.24!BNC2;;chr1:170632439..170632465,+!p11@PRRX1!0.63!3.24!PRRX1;;chr16:54320646..54320672,-!p2@IRX3!0.62!5.28!IRX3;;chr3:114343768..114343822,-!p1@ZBTB20!0.61!15.68!ZBTB20;;chr7:150945754..150945789,-!p2@SMARCD3!0.61!10.90!SMARCD3;;chr17:46621937..46621966,-!p2@HOXB2!0.61!9.54!HOXB2;;chr7:27135591..27135658,-!p1@HOXA1!0.61!6.65!HOXA1;;chr6:45390002..45390023,+!p6@RUNX2!0.61!5.79!RUNX2;;chr17:59477197..59477212,+!p2@TBX2!0.61!5.79!TBX2;;chr18:53257001..53257015,-!p5@TCF4!0.61!5.79!TCF4;;chr6:45390077..45390105,+!p9@RUNX2!0.61!4.09!RUNX2;;chr6:10412392..10412409,-!p4@TFAP2A!0.61!3.58!TFAP2A;;chr18:53068911..53068935,-!p4@TCF4!0.61!3.58!TCF4;;chr16:31076332..31076388,-!p3@ZNF668!0.61!3.07!ZNF668;;chr17:46687935..46687950,-!p3@HOXB7!0.61!3.07!HOXB7;;chr17:46806067..46806097,-!p1@HOXB13!0.61!3.07!HOXB13;;chr6:45296191..45296203,+!p13@RUNX2!0.61!3.07!RUNX2;;chr7:27183291..27183324,-!p1@HOXA5!0.61!3.07!HOXA5;;chr2:45236579..45236596,-!p2@SIX2!0.61!3.07!SIX2;;chr2:74726710..74726736,-!p3@LBX2!0.61!3.07!LBX2;;chr17:46622440..46622477,-!p5@HOXB2!0.60!3.41!HOXB2;;chr5:134369905..134369972,-!p1@PITX1!0.59!4.77!PITX1;;chr20:55204351..55204377,+!p1@TFAP2C!0.59!3.92!TFAP2C;;chr7:27213893..27213954,-!p1@HOXA10!0.59!2.90!HOXA10;;chr12:54410948..54410992,+!p3@HOXC5!0.59!2.90!HOXC5;;chr2:102091144..102091183,-!p2@RFX8!0.59!2.90!RFX8;;chr16:86600870..86600921,+!p2@FOXC2!0.59!2.90!FOXC2;;chr14:89029366..89029425,+!p1@ZC3H14!0.58!81.28!ZC3H14;;chr11:65687362..65687436,+!p3@DRAP1!0.58!15.16!DRAP1;;chr11:65667884..65667895,-!p2@FOSL1!0.58!12.78!FOSL1;;chr17:38256799..38256815,-!p3@NR1D1!0.58!5.62!NR1D1;;chr2:28615716..28615733,+!p1@FOSL2!0.57!159.48!FOSL2;;chr12:80084333..80084380,-!p4@PAWR!0.57!15.85!PAWR;;chr9:2158443..2158481,+!p2@SMARCA2!0.57!9.03!SMARCA2;;chr13:74708475..74708499,-!p5@KLF12!0.57!7.16!KLF12;;chr3:114343826..114343869,-!p4@ZBTB20!0.57!6.13!ZBTB20;;chr5:43067636..43067674,+!p6@ZNF131!0.57!3.92!ZNF131;;chr17:46675420..46675465,-!p3@HOXB6!0.57!3.24!HOXB6;;chr3:157824001..157824078,-!p2@SHOX2!0.57!2.73!SHOX2;;chr1:170632115..170632136,+!p9@PRRX1!0.57!2.73!PRRX1;;chr5:142780189..142780223,-!p6@NR3C1!0.57!2.73!NR3C1;;chr7:27169801..27169844,-!p2@HOXA4!0.57!2.73!HOXA4;;chr7:27183263..27183284,-!p2@HOXA5!0.57!2.73!HOXA5;;chr1:211433275..211433335,+!p2@RCOR3!0.56!9.54!RCOR3;;chr17:59477275..59477286,+!p3@TBX2!0.56!3.75!TBX2;;chr19:4065848..4065909,-!p4@ZBTB7A!0.55!5.62!ZBTB7A;;chr19:13134457..13134462,+!p5@NFIX!0.55!5.11!NFIX;;chr21:36260343..36260402,-!p6@RUNX1!0.55!4.60!RUNX1;;chr6:45390300..45390335,+!p4@RUNX2!0.55!4.43!RUNX2;;chr3:101546827..101546847,+!p2@NFKBIZ!0.55!3.92!NFKBIZ;;chr3:25470156..25470227,+!p2@RARB!0.55!2.56!RARB;;c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NF189;;chr19:21579908..21579949,+!p1@ZNF493!0.19!7.84!ZNF493;;chr19:23869970..23869991,-!p1@ZNF675!0.19!4.60!ZNF675;;chr19:36870087..36870110,-!p1@ZFP14!0.19!4.43!ZFP14;;chr17:38256877..38256900,-!p2@NR1D1!0.19!3.75!NR1D1;;chr19:11877838..11877915,+!p1@ZNF441!0.19!3.58!ZNF441;;chr10:35484053..35484076,+!p1@CREM!0.19!2.73!CREM;;chr16:8962544..8962584,-!p2@CARHSP1!0.19!2.39!CARHSP1;;chr14:89628064..89628109,-!p4@FOXN3!0.19!2.04!FOXN3;;chr2:214015111..214015179,-!p1@IKZF2!0.19!1.70!IKZF2;;chr16:30418894..30418909,+!p2@ZNF771!0.19!1.53!ZNF771;;chr6:28367481..28367506,-!p2@ZSCAN12!0.19!1.36!ZSCAN12;;chr7:64023410..64023428,-!p2@ZNF680!0.19!1.36!ZNF680;;chr5:178322893..178322931,+!p1@ZFP2!0.19!1.19!ZFP2;;chr15:96875041..96875052,+!p17@NR2F2!0.19!1.19!NR2F2;;chr17:79881332..79881348,-!p3@MAFG!0.19!1.19!MAFG;;chr16:4365715..4365746,+!p@chr16:4365715..4365746,+!0.19!1.02!GLIS2;;chr2:66662232..66662243,+!p5@MEIS1!0.19!1.02!MEIS1;;chr3:71632811..71632825,-!p19@FOXP1!0.19!1.02!FOXP1;;chr4:106156933..106156947,+!p3@TET2!0.19!1.02!TET2;;chrX:66763815..66763854,+!p2@AR!0.19!1.02!AR;;chr5:92920256..92920282,+!p7@NR2F1!0.19!0.85!NR2F1;;chr22:42666429..42666436,-!p@chr22:42666429..42666436,-!0.19!0.68!TCF20;;chr1:59249707..59249727,-!p1@JUN!0.18!57.25!JUN;;chr19:44123734..44123796,-!p1@ZNF428!0.18!50.61!ZNF428;;chr16:69599861..69599885,+!p1@NFAT5!0.18!21.64!NFAT5;;chr2:70314579..70314590,+!p2@PCBP1!0.18!20.79!PCBP1;;chr10:77161504..77161530,-!p1@ZNF503!0.18!17.72!ZNF503;;chr12:95467359..95467417,-!p2@NR2C1!0.18!17.38!NR2C1;;chr1:197170394..197170444,-!p@chr1:197170394..197170444,-!0.18!14.14!ZBTB41;;chr7:77428149..77428220,+!p1@PHTF2!0.18!13.29!PHTF2;;chr17:4890919..4890985,-!p1@CAMTA2!0.18!12.10!CAMTA2;;chrX:152599604..152599626,+!p1@ZNF275!0.18!9.71!ZNF275;;chr9:35732647..35732678,+!p2@CREB3!0.18!6.82!CREB3;;chr19:37407212..37407280,+!p1@ZNF568!0.18!4.77!ZNF568;;chr19:53696587..53696633,-!p1@ZNF665!0.18!4.26!ZNF665;;chr6:12011943..12012015,+!p2@HIVEP1!0.18!3.58!HIVEP1;;chr2:148778973..148779035,+!p3@MBD5!0.18!2.73!MBD5;;chr19:36705547..36705597,-!p1@ZNF565!0.18!2.73!ZNF565;;chr14:69262789..69262822,-!p2@ZFP36L1!0.18!2.73!ZFP36L1;;chr20:3388207..3388236,-!p4@C20orf194!0.18!2.56!C20orf194;;chrX:129244885..129244926,-!p3@ELF4!0.18!2.56!ELF4;;chr1:211433151..211433191,+!p5@RCOR3!0.18!2.04!RCOR3;;chr5:178157700..178157734,-!p3@ZNF354A!0.18!2.04!ZNF354A;;chr8:116681150..116681164,-!p5@TRPS1!0.18!1.87!TRPS1;;chr19:36909484..36909525,-!p2@ZFP82!0.18!1.87!ZFP82;;chr22:46546494..46546525,+!p2@PPARA!0.18!1.87!PPARA;;chr10:3824332..3824425,-!p4@KLF6!0.18!1.36!KLF6;;chr14:64970593..64970627,+!p5@ZBTB1!0.18!1.19!ZBTB1;;chr1:247171316..247171336,-!p3@ZNF695!0.18!1.19!ZNF695;;chr18:3448422..3448439,+!p11@TGIF1!0.18!1.19!TGIF1;;chr6:28234822..28234836,+!p1@ZNF187!0.18!1.19!ZNF187;;chrX:129402754..129402766,-!p3@ZNF280C!0.18!1.02!ZNF280C;;chr16:73093174..73093209,-!p3@ZFHX3!0.18!1.02!ZFHX3;;chr20:44600199..44600219,-!p3@ZNF335!0.18!1.02!ZNF335;;chr1:23696448..23696453,-!p5@ZNF436!0.18!0.85!ZNF436;;chr8:124286761..124286773,-!p4@ZHX1!0.18!0.85!ZHX1;;chr3:170075080..170075089,+!p7@SKIL!0.18!0.85!SKIL;;chr18:42260030..42260055,+!p3@SETBP1!0.18!0.85!SETBP1;;chr9:2016758..2016782,+!p11@SMARCA2!0.18!0.85!SMARCA2;;chr6:21594252..21594285,+!p11@SOX4!0.18!0.68!SOX4;;chr12:51611888..51611917,-!p3@POU6F1!0.18!0.68!POU6F1;;chr18:3452133..3452150,+!p19@TGIF1!0.18!0.68!TGIF1;;chr2:24930357..24930402,+!p3@NCOA1!0.18!0.68!NCOA1;;chr2:25565329..25565342,-!p6@DNMT3A!0.18!0.68!DNMT3A;;chr22:22874610..22874616,-!p1@ZNF280A!0.18!0.51!ZNF280A;;chr22:46546390..46546401,+!p3@PPARA!0.18!0.51!PPARA;;chr2:100721310..100721325,-!p7@AFF3!0.18!0.51!AFF3;;chr2:113977697..113977733,-!p6@PAX8!0.18!0.51!PAX8;;chr2:177001366..177001379,+!p4@HOXD3!0.18!0.51!HOXD3;;
|expression_enrichment_score=chr12:124873852..124873881,-!p3@NCOR2!1.87!416.09!NCOR2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.84!68.33!HOXC5;;chr2:176969228..176969260,+!p1@HOXD11!1.75!55.55!HOXD11;;chr1:170632285..170632309,+!p1@PRRX1!1.66!50.26!PRRX1;;chr12:124873357..124873401,-!p1@NCOR2!1.64!470.95!NCOR2;;chr6:45296048..45296082,+!p1@RUNX2!1.55!39.02!RUNX2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.54!33.57!ZBED1;;chr1:197886461..197886558,+!p1@LHX9!1.51!31.52!LHX9;;chr2:176969179..176969226,+!p2@HOXD11!1.50!30.33!HOXD11;;chr6:134210243..134210257,+!p1@TCF21!1.47!28.45!TCF21;;chr8:25902876..25902936,-!p1@EBF2!1.44!26.58!EBF2;;chr7:27192185..27192209,-!p1@HOXA3!1.33!20.62!HOXA3;;chr15:42749722..42749739,-!p2@ZFP106!1.31!34.76!ZFP106;;chr8:40755333..40755352,-!p1@ZMAT4!1.28!18.23!ZMAT4;;chr17:46682321..46682362,-!p1@HOXB6!1.26!17.04!HOXB6;;chr2:119605214..119605230,-!p1@EN1!1.26!17.04!EN1;;chr10:8096772..8096787,+!p2@GATA3!1.24!19.42!GATA3;;chr11:46299199..46299233,+!p1@CREB3L1!1.23!81.79!CREB3L1;;chr17:46690839..46690884,-!p1@HOXB8!1.23!15.85!HOXB8;;chr4:111558135..111558198,-!p2@PITX2!1.20!14.99!PITX2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.19!14.48!HOXC5;;chr21:36421535..36421610,-!p2@RUNX1!1.18!49.58!RUNX1;;chr12:124873824..124873833,-!p19@NCOR2!1.18!13.97!NCOR2;;chr13:74708029..74708077,-!p2@KLF12!1.15!37.66!KLF12;;chr6:10415276..10415341,-!p2@TFAP2A!1.14!15.85!TFAP2A;;chr8:49833978..49833996,-!p1@SNAI2!1.09!231.22!SNAI2;;chr10:8096631..8096660,+!p1@GATA3!1.09!13.63!GATA3;;chr7:27205136..27205164,-!p1@HOXA9!1.09!11.42!HOXA9;;chr1:170632250..170632277,+!p7@PRRX1!1.09!11.42!PRRX1;;chr8:49833948..49833973,-!p2@SNAI2!1.08!70.88!SNAI2;;chr7:27224842..27224872,-!p1@HOXA11!1.08!10.90!HOXA11;;chr6:10412600..10412637,-!p1@TFAP2A!1.07!17.89!TFAP2A;;chr12:54402745..54402788,+!p1@HOXC8!1.07!10.73!HOXC8;;chr11:46299539..46299620,+!p2@CREB3L1!1.04!17.04!CREB3L1;;chr16:86600426..86600441,+!p1@FOXC2!1.02!23.51!FOXC2;;chr1:170633348..170633399,+!p2@PRRX1!1.02!13.12!PRRX1;;chr3:147111198..147111225,+!p4@ZIC1!1.00!9.03!ZIC1;;chr12:115122318..115122331,-!p2@TBX3!0.99!8.69!TBX3;;chr7:35293685..35293718,-!p1@TBX20!0.98!8.52!TBX20;;chr2:200322654..200322707,-!p2@SATB2!0.97!12.27!SATB2;;chr3:157823517..157823562,-!p1@SHOX2!0.97!8.86!SHOX2;;chr2:176969097..176969109,+!p3@HOXD11!0.97!8.35!HOXD11;;chr12:54393880..54393962,+!p1@HOXC9!0.97!8.35!HOXC9;;chr8:106330656..106330684,+!p1@ZFPM2!0.95!21.47!ZFPM2;;chr15:57511609..57511651,+!p2@TCF12!0.95!13.46!TCF12;;chr1:170633262..170633285,+!p3@PRRX1!0.95!9.20!PRRX1;;chr2:176969124..176969155,+!p5@HOXD11!0.95!8.01!HOXD11;;chr17:46688334..46688385,-!p1@HOXB7!0.94!11.42!HOXB7;;chr3:71630980..71631110,-!p3@FOXP1!0.93!27.09!FOXP1;;chr10:131762504..131762555,-!p1@EBF3!0.93!7.50!EBF3;;chr17:46691732..46691766,-!p4@HOXB8!0.93!7.50!HOXB8;;chr6:28321971..28321995,-!p1@ZNF323!0.93!7.50!ZNF323;;chr17:46687959..46688007,-!p2@HOXB7!0.92!10.39!HOXB7;;chr15:96869255..96869291,+!p6@NR2F2!0.91!13.29!NR2F2;;chr16:86544113..86544145,+!p1@FOXF1!0.91!8.86!FOXF1;;chr2:176994408..176994492,+!p1@HOXD8!0.91!7.16!HOXD8;;chr2:45236540..45236577,-!p1@SIX2!0.91!7.16!SIX2;;chr7:27153454..27153469,-!p2@HOXA3!0.91!7.16!HOXA3;;chr12:54402790..54402805,+!p2@HOXC8!0.90!6.99!HOXC8;;chr12:115121962..115121987,-!p1@TBX3!0.89!60.15!TBX3;;chr3:147127142..147127168,+!p1@ZIC1!0.89!6.82!ZIC1;;chr5:72744594..72744609,-!p1@FOXD1!0.88!31.69!FOXD1;;chr2:19558373..19558392,-!p1@OSR1!0.88!18.74!OSR1;;chr16:54320617..54320643,-!p3@IRX3!0.87!8.35!IRX3;;chr3:147111231..147111281,+!p3@ZIC1!0.87!6.47!ZIC1;;chr7:19157248..19157268,-!p1@TWIST1!0.86!18.23!TWIST1;;chr17:46622070..46622109,-!p1@HOXB2!0.86!14.48!HOXB2;;chr7:27205106..27205134,-!p2@HOXA9!0.86!6.30!HOXA9;;chr1:170632959..170632987,+!p4@PRRX1!0.85!6.82!PRRX1;;chr2:200323414..200323455,-!p1@SATB2!0.84!13.29!SATB2;;chr19:1592828..1592910,-!p2@MBD3!0.83!48.90!MBD3;;chr2:71127699..71127744,+!p1@VAX2!0.83!12.44!VAX2;;chr17:46622114..46622138,-!p4@HOXB2!0.83!9.03!HOXB2;;chr2:119604456..119604501,-!p2@EN1!0.82!5.62!EN1;;chr12:80085255..80085284,-!p9@PAWR!0.81!8.18!PAWR;;chr10:8095593..8095625,+!p3@GATA3!0.81!6.47!GATA3;;chr7:27142290..27142310,-!p1@HOXA2!0.79!5.11!HOXA2;;chr6:144329384..144329405,-!p1@PLAGL1!0.77!62.02!PLAGL1;;chr19:4066803..4066886,-!p1@ZBTB7A!0.77!57.93!ZBTB7A;;chr8:77593474..77593612,+!p1@ZFHX4!0.77!22.49!ZFHX4;;chr17:59477233..59477263,+!p1@TBX2!0.77!16.53!TBX2;;chr7:27196267..27196311,-!p1@HOXA7!0.77!4.94!HOXA7;;chr7:19157043..19157088,-!p2@TWIST1!0.76!12.95!TWIST1;;chr3:178789522..178789564,-!p2@ZMAT3!0.75!37.66!ZMAT3;;chr5:72744445..72744466,-!p2@FOXD1!0.75!8.18!FOXD1;;chr1:151032860..151032918,+!p1@MLLT11!0.74!59.81!MLLT11;;chr19:4067039..4067064,-!p3@ZBTB7A!0.74!14.31!ZBTB7A;;chr19:31840130..31840160,-!p2@TSHZ3!0.74!7.33!TSHZ3;;chr16:54320158..54320200,-!p5@IRX3!0.74!6.82!IRX3;;chr2:66662281..66662308,+!p1@MEIS1!0.73!16.53!MEIS1;;chr8:67525443..67525459,-!p2@MYBL1!0.73!6.82!MYBL1;;chr9:16870659..16870675,-!p2@BNC2!0.73!5.45!BNC2;;chr5:139492456..139492489,+!p7@PURA!0.73!4.43!PURA;;chr1:119530493..119530572,-!p1@TBX15!0.73!4.43!TBX15;;chr1:170632477..170632506,+!p6@PRRX1!0.73!4.43!PRRX1;;chr2:172949484..172949522,+!p1@DLX1!0.73!4.43!DLX1;;chr19:4065485..4065546,-!p2@ZBTB7A!0.72!42.26!ZBTB7A;;chr11:65686732..65686756,+!p2@DRAP1!0.72!19.94!DRAP1;;chr11:65687222..65687240,+!p7@DRAP1!0.72!5.62!DRAP1;;chr13:74707894..74707947,-!p6@KLF12!0.72!4.77!KLF12;;chr11:125034640..125034655,+!p1@PKNOX2!0.72!4.26!PKNOX2;;chr7:27224795..27224840,-!p2@HOXA11!0.72!4.26!HOXA11;;chr6:45390025..45390076,+!p2@RUNX2!0.71!10.73!RUNX2;;chr11:65686802..65686818,+!p6@DRAP1!0.71!7.67!DRAP1;;chr21:36259445..36259519,-!p4@RUNX1!0.70!12.27!RUNX1;;chr12:124827609..124827643,-!p9@NCOR2!0.69!5.96!NCOR2;;chr15:96869292..96869320,+!p15@NR2F2!0.69!5.96!NR2F2;;chr7:27195867..27195893,-!p3@HOXA7!0.69!3.92!HOXA7;;chr12:69753448..69753577,+!p1@YEATS4!0.68!87.07!YEATS4;;chr19:50529247..50529296,+!p1@ZNF473!0.68!28.11!ZNF473;;chr2:121493425..121493474,+!p1@GLI2!0.68!9.20!GLI2;;chr2:74730430..74730451,-!p1@LBX2!0.68!6.65!LBX2;;chr19:4066890..4066903,-!p6@ZBTB7A!0.68!6.47!ZBTB7A;;chr12:54402729..54402743,+!p3@HOXC8!0.68!3.75!HOXC8;;chr7:27196217..27196246,-!p2@HOXA7!0.68!3.75!HOXA7;;chr19:1592714..1592762,-!p1@MBD3!0.67!32.03!MBD3;;chr7:150946015..150946070,-!p3@SMARCD3!0.67!8.69!SMARCD3;;chr17:46622205..46622218,-!p3@HOXB2!0.66!4.26!HOXB2;;chr1:170632723..170632739,+!p8@PRRX1!0.66!3.58!PRRX1;;chr21:36421347..36421380,-!p8@RUNX1!0.66!3.58!RUNX1;;chr11:46299443..46299459,+!p4@CREB3L1!0.66!3.58!CREB3L1;;chr2:102091566..102091581,-!p1@RFX8!0.66!3.58!RFX8;;chr2:172950227..172950249,+!p2@DLX1!0.66!3.58!DLX1;;chr5:321810..321877,+!p1@AHRR!0.65!12.61!AHRR;;chr7:4815238..4815327,+!p1@KIAA0415!0.64!87.58!AP5Z1;;chr12:122516646..122516668,+!p1@MLXIP!0.64!53.84!MLXIP;;chr13:74708269..74708291,-!p7@KLF12!0.64!4.77!KLF12;;chr12:115122303..115122314,-!p6@TBX3!0.64!3.41!TBX3;;chr3:147127177..147127194,+!p2@ZIC1!0.64!3.41!ZIC1;;chr17:45928443..45928473,-!p2@SP6!0.64!3.41!SP6;;chr1:170632683..170632696,+!p12@PRRX1!0.64!3.41!PRRX1;;chr14:90085458..90085557,-!p1@FOXN3!0.63!40.21!FOXN3;;chr18:53257027..53257052,-!p3@TCF4!0.63!15.16!TCF4;;chr11:706938..707008,-!p3@DEAF1!0.63!4.26!DEAF1;;chr13:74708246..74708264,-!p8@KLF12!0.63!3.75!KLF12;;chr9:16728327..16728338,-!p5@BNC2!0.63!3.24!BNC2;;chr1:170632439..170632465,+!p11@PRRX1!0.63!3.24!PRRX1;;chr16:54320646..54320672,-!p2@IRX3!0.62!5.28!IRX3;;chr3:114343768..114343822,-!p1@ZBTB20!0.61!15.68!ZBTB20;;chr7:150945754..150945789,-!p2@SMARCD3!0.61!10.90!SMARCD3;;chr17:46621937..46621966,-!p2@HOXB2!0.61!9.54!HOXB2;;chr7:27135591..27135658,-!p1@HOXA1!0.61!6.65!HOXA1;;chr6:45390002..45390023,+!p6@RUNX2!0.61!5.79!RUNX2;;chr17:59477197..59477212,+!p2@TBX2!0.61!5.79!TBX2;;chr18:53257001..53257015,-!p5@TCF4!0.61!5.79!TCF4;;chr6:45390077..45390105,+!p9@RUNX2!0.61!4.09!RUNX2;;chr6:10412392..10412409,-!p4@TFAP2A!0.61!3.58!TFAP2A;;chr18:53068911..53068935,-!p4@TCF4!0.61!3.58!TCF4;;chr16:31076332..31076388,-!p3@ZNF668!0.61!3.07!ZNF668;;chr17:46687935..46687950,-!p3@HOXB7!0.61!3.07!HOXB7;;chr17:46806067..46806097,-!p1@HOXB13!0.61!3.07!HOXB13;;chr6:45296191..45296203,+!p13@RUNX2!0.61!3.07!RUNX2;;chr7:27183291..27183324,-!p1@HOXA5!0.61!3.07!HOXA5;;chr2:45236579..45236596,-!p2@SIX2!0.61!3.07!SIX2;;chr2:74726710..74726736,-!p3@LBX2!0.61!3.07!LBX2;;chr17:46622440..46622477,-!p5@HOXB2!0.60!3.41!HOXB2;;chr5:134369905..134369972,-!p1@PITX1!0.59!4.77!PITX1;;chr20:55204351..55204377,+!p1@TFAP2C!0.59!3.92!TFAP2C;;chr7:27213893..27213954,-!p1@HOXA10!0.59!2.90!HOXA10;;chr12:54410948..54410992,+!p3@HOXC5!0.59!2.90!HOXC5;;chr2:102091144..102091183,-!p2@RFX8!0.59!2.90!RFX8;;chr16:86600870..86600921,+!p2@FOXC2!0.59!2.90!FOXC2;;chr14:89029366..89029425,+!p1@ZC3H14!0.58!81.28!ZC3H14;;chr11:65687362..65687436,+!p3@DRAP1!0.58!15.16!DRAP1;;chr11:65667884..65667895,-!p2@FOSL1!0.58!12.78!FOSL1;;chr17:38256799..38256815,-!p3@NR1D1!0.58!5.62!NR1D1;;chr2:28615716..28615733,+!p1@FOSL2!0.57!159.48!FOSL2;;chr12:80084333..80084380,-!p4@PAWR!0.57!15.85!PAWR;;chr9:2158443..2158481,+!p2@SMARCA2!0.57!9.03!SMARCA2;;chr13:74708475..74708499,-!p5@KLF12!0.57!7.16!KLF12;;chr3:114343826..114343869,-!p4@ZBTB20!0.57!6.13!ZBTB20;;chr5:43067636..43067674,+!p6@ZNF131!0.57!3.92!ZNF131;;chr17:46675420..46675465,-!p3@HOXB6!0.57!3.24!HOXB6;;chr3:157824001..157824078,-!p2@SHOX2!0.57!2.73!SHOX2;;chr1:170632115..170632136,+!p9@PRRX1!0.57!2.73!PRRX1;;chr5:142780189..142780223,-!p6@NR3C1!0.57!2.73!NR3C1;;chr7:27169801..27169844,-!p2@HOXA4!0.57!2.73!HOXA4;;chr7:27183263..27183284,-!p2@HOXA5!0.57!2.73!HOXA5;;chr1:211433275..211433335,+!p2@RCOR3!0.56!9.54!RCOR3;;chr17:59477275..59477286,+!p3@TBX2!0.56!3.75!TBX2;;chr19:4065848..4065909,-!p4@ZBTB7A!0.55!5.62!ZBTB7A;;chr19:13134457..13134462,+!p5@NFIX!0.55!5.11!NFIX;;chr21:36260343..36260402,-!p6@RUNX1!0.55!4.60!RUNX1;;chr6:45390300..45390335,+!p4@RUNX2!0.55!4.43!RUNX2;;chr3:101546827..101546847,+!p2@NFKBIZ!0.55!3.92!NFKBIZ;;chr3:25470156..25470227,+!p2@RARB!0.55!2.56!RARB;;c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NF189;;chr19:21579908..21579949,+!p1@ZNF493!0.19!7.84!ZNF493;;chr19:23869970..23869991,-!p1@ZNF675!0.19!4.60!ZNF675;;chr19:36870087..36870110,-!p1@ZFP14!0.19!4.43!ZFP14;;chr17:38256877..38256900,-!p2@NR1D1!0.19!3.75!NR1D1;;chr19:11877838..11877915,+!p1@ZNF441!0.19!3.58!ZNF441;;chr10:35484053..35484076,+!p1@CREM!0.19!2.73!CREM;;chr16:8962544..8962584,-!p2@CARHSP1!0.19!2.39!CARHSP1;;chr14:89628064..89628109,-!p4@FOXN3!0.19!2.04!FOXN3;;chr2:214015111..214015179,-!p1@IKZF2!0.19!1.70!IKZF2;;chr16:30418894..30418909,+!p2@ZNF771!0.19!1.53!ZNF771;;chr6:28367481..28367506,-!p2@ZSCAN12!0.19!1.36!ZSCAN12;;chr7:64023410..64023428,-!p2@ZNF680!0.19!1.36!ZNF680;;chr5:178322893..178322931,+!p1@ZFP2!0.19!1.19!ZFP2;;chr15:96875041..96875052,+!p17@NR2F2!0.19!1.19!NR2F2;;chr17:79881332..79881348,-!p3@MAFG!0.19!1.19!MAFG;;chr16:4365715..4365746,+!p@chr16:4365715..4365746,+!0.19!1.02!GLIS2;;chr2:66662232..66662243,+!p5@MEIS1!0.19!1.02!MEIS1;;chr3:71632811..71632825,-!p19@FOXP1!0.19!1.02!FOXP1;;chr4:106156933..106156947,+!p3@TET2!0.19!1.02!TET2;;chrX:66763815..66763854,+!p2@AR!0.19!1.02!AR;;chr5:92920256..92920282,+!p7@NR2F1!0.19!0.85!NR2F1;;chr22:42666429..42666436,-!p@chr22:42666429..42666436,-!0.19!0.68!TCF20;;chr1:59249707..59249727,-!p1@JUN!0.18!57.25!JUN;;chr19:44123734..44123796,-!p1@ZNF428!0.18!50.61!ZNF428;;chr16:69599861..69599885,+!p1@NFAT5!0.18!21.64!NFAT5;;chr2:70314579..70314590,+!p2@PCBP1!0.18!20.79!PCBP1;;chr10:77161504..77161530,-!p1@ZNF503!0.18!17.72!ZNF503;;chr12:95467359..95467417,-!p2@NR2C1!0.18!17.38!NR2C1;;chr1:197170394..197170444,-!p@chr1:197170394..197170444,-!0.18!14.14!ZBTB41;;chr7:77428149..77428220,+!p1@PHTF2!0.18!13.29!PHTF2;;chr17:4890919..4890985,-!p1@CAMTA2!0.18!12.10!CAMTA2;;chrX:152599604..152599626,+!p1@ZNF275!0.18!9.71!ZNF275;;chr9:35732647..35732678,+!p2@CREB3!0.18!6.82!CREB3;;chr19:37407212..37407280,+!p1@ZNF568!0.18!4.77!ZNF568;;chr19:53696587..53696633,-!p1@ZNF665!0.18!4.26!ZNF665;;chr6:12011943..12012015,+!p2@HIVEP1!0.18!3.58!HIVEP1;;chr2:148778973..148779035,+!p3@MBD5!0.18!2.73!MBD5;;chr19:36705547..36705597,-!p1@ZNF565!0.18!2.73!ZNF565;;chr14:69262789..69262822,-!p2@ZFP36L1!0.18!2.73!ZFP36L1;;chr20:3388207..3388236,-!p4@C20orf194!0.18!2.56!C20orf194;;chrX:129244885..129244926,-!p3@ELF4!0.18!2.56!ELF4;;chr1:211433151..211433191,+!p5@RCOR3!0.18!2.04!RCOR3;;chr5:178157700..178157734,-!p3@ZNF354A!0.18!2.04!ZNF354A;;chr8:116681150..116681164,-!p5@TRPS1!0.18!1.87!TRPS1;;chr19:36909484..36909525,-!p2@ZFP82!0.18!1.87!ZFP82;;chr22:46546494..46546525,+!p2@PPARA!0.18!1.87!PPARA;;chr10:3824332..3824425,-!p4@KLF6!0.18!1.36!KLF6;;chr14:64970593..64970627,+!p5@ZBTB1!0.18!1.19!ZBTB1;;chr1:247171316..247171336,-!p3@ZNF695!0.18!1.19!ZNF695;;chr18:3448422..3448439,+!p11@TGIF1!0.18!1.19!TGIF1;;chr6:28234822..28234836,+!p1@ZNF187!0.18!1.19!ZNF187;;chrX:129402754..129402766,-!p3@ZNF280C!0.18!1.02!ZNF280C;;chr16:73093174..73093209,-!p3@ZFHX3!0.18!1.02!ZFHX3;;chr20:44600199..44600219,-!p3@ZNF335!0.18!1.02!ZNF335;;chr1:23696448..23696453,-!p5@ZNF436!0.18!0.85!ZNF436;;chr8:124286761..124286773,-!p4@ZHX1!0.18!0.85!ZHX1;;chr3:170075080..170075089,+!p7@SKIL!0.18!0.85!SKIL;;chr18:42260030..42260055,+!p3@SETBP1!0.18!0.85!SETBP1;;chr9:2016758..2016782,+!p11@SMARCA2!0.18!0.85!SMARCA2;;chr6:21594252..21594285,+!p11@SOX4!0.18!0.68!SOX4;;chr12:51611888..51611917,-!p3@POU6F1!0.18!0.68!POU6F1;;chr18:3452133..3452150,+!p19@TGIF1!0.18!0.68!TGIF1;;chr2:24930357..24930402,+!p3@NCOA1!0.18!0.68!NCOA1;;chr2:25565329..25565342,-!p6@DNMT3A!0.18!0.68!DNMT3A;;chr22:22874610..22874616,-!p1@ZNF280A!0.18!0.51!ZNF280A;;chr22:46546390..46546401,+!p3@PPARA!0.18!0.51!PPARA;;chr2:100721310..100721325,-!p7@AFF3!0.18!0.51!AFF3;;chr2:113977697..113977733,-!p6@PAX8!0.18!0.51!PAX8;;chr2:177001366..177001379,+!p4@HOXD3!0.18!0.51!HOXD3;;
Line 35: Line 40:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/liposarcoma%2520cell%2520line%253aKMLS-1.CNhs11870.10782-110G8.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/liposarcoma%2520cell%2520line%253aKMLS-1.CNhs11870.10782-110G8.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/liposarcoma%2520cell%2520line%253aKMLS-1.CNhs11870.10782-110G8.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/liposarcoma%2520cell%2520line%253aKMLS-1.CNhs11870.10782-110G8.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/liposarcoma%2520cell%2520line%253aKMLS-1.CNhs11870.10782-110G8.hg38.nobarcode.ctss.bed.gz
|id=FF:10782-110G8
|id=FF:10782-110G8
|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0103744
|is_a=EFO:0002091;;FF:0000210;;FF:0103744
|is_obsolete=
|library_id=CNhs11870
|library_id_phase_based=2:CNhs11870
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10782
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10782
|name=liposarcoma cell line:KMLS-1
|name=liposarcoma cell line:KMLS-1
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 59:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11870,LSID830,release010,COMPLETED
|profile_hcage=CNhs11870,LSID830,release010,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0.0341649341991287,0,0.275469904121696,0,0,0.0653922943194612,0,0.167099661296879,0.379531407883949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187659405468457,0,0,0.0341649341991287,0,0,0.529138738656737,0,0,0.172895033185389,0,0,0,0,0,0,0,0,0,0,0,0,0.183514936776891,0.177488249166793,0,0,0,0,0,0,0,0.0099499130862943,0,0,0,0,0,0.0525339582906389,0,0.386545907091482,0,0,0.030012614349106,0,0,0,0,0,0,0,0,0.127356241562203,0,0,0,0,0.0683298683982573,0,0,0,0.0876541155737092,0.0636781207811015,0,0.0931706279653312,0,0,0,0.292227334075901,0.152925811482126,0,0,-0.205679546965597,-0.113354347715639,0.0341649341991287,0.225710324405847,0.0636781207811015,0,0.0812762665168361,0.271135998364708,0,0,0.000153570923712106,0.0683298683982573,0,0,0,0,0,0,0.0978430549802301,0,0,0,0,0,0,0.074117613985981,0,0,0,0.101415854876647,0.270426421906507,0,0,0.127356241562203,0,0,0
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|rna_box=110
|rna_box=110
|rna_catalog_number=
|rna_catalog_number=
Line 57: Line 77:
|rna_weight_ug=32.77017
|rna_weight_ug=32.77017
|sample_age=unknown
|sample_age=unknown
|sample_category=cell lines
|sample_cell_catalog=jcrb0200
|sample_cell_catalog=jcrb0200
|sample_cell_line=KMLS-1
|sample_cell_line=KMLS-1
Line 69: Line 90:
|sample_ethnicity=unknown
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.41187458764461e-229!GO:0043226;organelle;5.77785724880232e-190!GO:0043229;intracellular organelle;1.33592841206417e-189!GO:0043231;intracellular membrane-bound organelle;3.16540150152024e-188!GO:0043227;membrane-bound organelle;5.85878666123701e-188!GO:0005737;cytoplasm;1.09560281125281e-174!GO:0044444;cytoplasmic part;1.1662619444338e-136!GO:0044422;organelle part;1.36149576451423e-130!GO:0044446;intracellular organelle part;4.79920171725761e-129!GO:0032991;macromolecular complex;5.61556995714794e-89!GO:0044238;primary metabolic process;1.8860845071114e-84!GO:0044237;cellular metabolic process;3.6230485948984e-84!GO:0043170;macromolecule metabolic process;5.62198140908098e-83!GO:0030529;ribonucleoprotein complex;1.78468214193938e-76!GO:0005634;nucleus;1.1251171716599e-68!GO:0043233;organelle lumen;3.27165423382908e-68!GO:0031974;membrane-enclosed lumen;3.27165423382908e-68!GO:0005515;protein binding;3.34288775789982e-65!GO:0003723;RNA binding;1.31890261237699e-62!GO:0044428;nuclear part;2.81007812029003e-62!GO:0005739;mitochondrion;9.68544297454266e-62!GO:0031090;organelle membrane;1.58291135149849e-52!GO:0019538;protein metabolic process;1.75546033085107e-48!GO:0005840;ribosome;4.11023412185791e-47!GO:0043283;biopolymer metabolic process;8.98144449256649e-46!GO:0043234;protein complex;3.57734869672271e-45!GO:0016043;cellular component organization and biogenesis;7.05668351691729e-45!GO:0015031;protein transport;8.02960331935708e-45!GO:0033036;macromolecule localization;5.89300517662209e-44!GO:0006396;RNA processing;2.33763443912798e-43!GO:0044260;cellular macromolecule metabolic process;3.460552126692e-43!GO:0006412;translation;8.63437960999763e-43!GO:0044267;cellular protein metabolic process;2.62737685828788e-42!GO:0044429;mitochondrial part;5.93959537338673e-42!GO:0045184;establishment of protein localization;3.70905137635831e-41!GO:0010467;gene expression;7.07785356436479e-41!GO:0008104;protein localization;1.41297813512563e-40!GO:0003735;structural constituent of ribosome;1.63327396761036e-40!GO:0031981;nuclear lumen;9.42155501238308e-39!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.54298746482567e-38!GO:0031967;organelle envelope;2.8088800974705e-37!GO:0031975;envelope;4.78239996662434e-37!GO:0046907;intracellular transport;5.64232401139038e-36!GO:0005829;cytosol;1.48853401609222e-35!GO:0033279;ribosomal subunit;3.91183394594106e-35!GO:0009059;macromolecule biosynthetic process;3.91183394594106e-35!GO:0009058;biosynthetic process;4.22521678829361e-35!GO:0016071;mRNA metabolic process;1.7995905458051e-34!GO:0044249;cellular biosynthetic process;6.68942114310069e-32!GO:0008380;RNA splicing;8.85445228764592e-32!GO:0006397;mRNA processing;1.11750409186829e-29!GO:0006886;intracellular protein transport;3.87549249755681e-29!GO:0006996;organelle organization and biogenesis;4.29904766655924e-27!GO:0005740;mitochondrial envelope;4.29904766655924e-27!GO:0065003;macromolecular complex assembly;6.13083689272338e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.54276664355185e-25!GO:0031966;mitochondrial membrane;1.60482021693062e-25!GO:0005654;nucleoplasm;9.31215862258042e-25!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.48827199628521e-24!GO:0019866;organelle inner membrane;2.98451224904437e-24!GO:0043228;non-membrane-bound organelle;4.96630944668009e-24!GO:0043232;intracellular non-membrane-bound organelle;4.96630944668009e-24!GO:0003676;nucleic acid binding;1.04121241870297e-23!GO:0051649;establishment of cellular localization;7.0490468371133e-23!GO:0051641;cellular localization;8.76697316795051e-23!GO:0022607;cellular component assembly;1.30801642126533e-22!GO:0005743;mitochondrial inner membrane;1.30801642126533e-22!GO:0006119;oxidative phosphorylation;1.43891579689818e-22!GO:0012505;endomembrane system;8.95623075700529e-22!GO:0044445;cytosolic part;1.50532042421475e-21!GO:0005681;spliceosome;1.50532042421475e-21!GO:0005783;endoplasmic reticulum;2.86364355489669e-21!GO:0006259;DNA metabolic process;4.46344048537785e-21!GO:0044455;mitochondrial membrane part;9.90348332296194e-21!GO:0006457;protein folding;1.31302560982691e-20!GO:0000166;nucleotide binding;9.08578150605104e-20!GO:0044451;nucleoplasm part;1.74908386646944e-19!GO:0016070;RNA metabolic process;3.83926331562498e-19!GO:0048770;pigment granule;1.7472924962268e-18!GO:0042470;melanosome;1.7472924962268e-18!GO:0005794;Golgi apparatus;1.96784383772398e-18!GO:0015934;large ribosomal subunit;3.10926642940928e-18!GO:0015935;small ribosomal subunit;6.74848843090602e-18!GO:0044432;endoplasmic reticulum part;1.35557897976895e-17!GO:0031980;mitochondrial lumen;1.61418757746046e-17!GO:0005759;mitochondrial matrix;1.61418757746046e-17!GO:0006512;ubiquitin cycle;3.84443852838643e-17!GO:0007049;cell cycle;5.1820885201577e-17!GO:0016462;pyrophosphatase activity;7.01400090458555e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.20337773079686e-17!GO:0005746;mitochondrial respiratory chain;9.39337656326178e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;9.55282857005283e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.20097639965712e-16!GO:0017111;nucleoside-triphosphatase activity;1.21686982503368e-16!GO:0008134;transcription factor binding;1.96016516079322e-16!GO:0016874;ligase activity;3.4600273165142e-16!GO:0048193;Golgi vesicle transport;4.27172593293262e-16!GO:0022618;protein-RNA complex assembly;4.57914062547183e-16!GO:0000502;proteasome complex (sensu Eukaryota);7.45902069936762e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.0898866371399e-15!GO:0003954;NADH dehydrogenase activity;1.0898866371399e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.0898866371399e-15!GO:0044265;cellular macromolecule catabolic process;1.97239188164363e-15!GO:0016192;vesicle-mediated transport;2.25998971365908e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;7.30551593463428e-15!GO:0043285;biopolymer catabolic process;8.62377861966544e-15!GO:0005730;nucleolus;1.31918937302629e-14!GO:0044257;cellular protein catabolic process;1.33047249349534e-14!GO:0019941;modification-dependent protein catabolic process;1.65198672589744e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.65198672589744e-14!GO:0006974;response to DNA damage stimulus;2.53385285021083e-14!GO:0006511;ubiquitin-dependent protein catabolic process;3.14266284602877e-14!GO:0008135;translation factor activity, nucleic acid binding;3.41584595351736e-14!GO:0009057;macromolecule catabolic process;3.68536063096019e-14!GO:0051082;unfolded protein binding;3.85240654577562e-14!GO:0006605;protein targeting;4.61812232775409e-14!GO:0032553;ribonucleotide binding;5.22915147851128e-14!GO:0032555;purine ribonucleotide binding;5.22915147851128e-14!GO:0043412;biopolymer modification;7.97298838508029e-14!GO:0030964;NADH dehydrogenase complex (quinone);9.02351078590375e-14!GO:0045271;respiratory chain complex I;9.02351078590375e-14!GO:0005747;mitochondrial respiratory chain complex I;9.02351078590375e-14!GO:0005793;ER-Golgi intermediate compartment;9.48279351965827e-14!GO:0051186;cofactor metabolic process;1.08572106655844e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.1250610815227e-13!GO:0042773;ATP synthesis coupled electron transport;1.1250610815227e-13!GO:0005761;mitochondrial ribosome;1.65044876271117e-13!GO:0000313;organellar ribosome;1.65044876271117e-13!GO:0017076;purine nucleotide binding;2.09990468974868e-13!GO:0030163;protein catabolic process;2.69040538522184e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.83860107357318e-13!GO:0044248;cellular catabolic process;2.93849208508927e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.75096932892367e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.64121424306203e-13!GO:0022402;cell cycle process;1.46420064223291e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.03324114567693e-12!GO:0006464;protein modification process;2.94523443407866e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.58740235168435e-12!GO:0005524;ATP binding;4.84417758203766e-12!GO:0005789;endoplasmic reticulum membrane;1.22038585208112e-11!GO:0000278;mitotic cell cycle;1.49594599349474e-11!GO:0032559;adenyl ribonucleotide binding;1.52538906845277e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;3.90401755130524e-11!GO:0000375;RNA splicing, via transesterification reactions;3.90401755130524e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.90401755130524e-11!GO:0006281;DNA repair;4.10459931131073e-11!GO:0006732;coenzyme metabolic process;5.642902523538e-11!GO:0005635;nuclear envelope;6.0244321904052e-11!GO:0003743;translation initiation factor activity;6.60311920444454e-11!GO:0030554;adenyl nucleotide binding;8.39310085368365e-11!GO:0031965;nuclear membrane;1.56808306296574e-10!GO:0003712;transcription cofactor activity;1.98249761443668e-10!GO:0009259;ribonucleotide metabolic process;2.21392744538366e-10!GO:0043687;post-translational protein modification;2.301169534235e-10!GO:0006413;translational initiation;2.39228814455509e-10!GO:0006163;purine nucleotide metabolic process;2.57174962649858e-10!GO:0009055;electron carrier activity;2.67194902102212e-10!GO:0008639;small protein conjugating enzyme activity;4.18959639256432e-10!GO:0019787;small conjugating protein ligase activity;5.53312348365242e-10!GO:0009150;purine ribonucleotide metabolic process;5.71042166246528e-10!GO:0006446;regulation of translational initiation;7.52543690532084e-10!GO:0004842;ubiquitin-protein ligase activity;7.73577569199199e-10!GO:0000074;regulation of progression through cell cycle;9.20380473662806e-10!GO:0051726;regulation of cell cycle;9.96578985471783e-10!GO:0016604;nuclear body;1.12736955233619e-09!GO:0009719;response to endogenous stimulus;1.24343252757866e-09!GO:0006164;purine nucleotide biosynthetic process;1.48406154055947e-09!GO:0006913;nucleocytoplasmic transport;1.50002487349579e-09!GO:0012501;programmed cell death;1.84384184651477e-09!GO:0005768;endosome;2.08021080357841e-09!GO:0042254;ribosome biogenesis and assembly;2.46560029490554e-09!GO:0051169;nuclear transport;3.14490928911427e-09!GO:0006399;tRNA metabolic process;3.15784629753774e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.17963329100544e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.21689457781235e-09!GO:0006915;apoptosis;3.93869055451788e-09!GO:0016887;ATPase activity;4.03707212209886e-09!GO:0009260;ribonucleotide biosynthetic process;4.28728903566075e-09!GO:0042623;ATPase activity, coupled;4.35761909749089e-09!GO:0044453;nuclear membrane part;4.35761909749089e-09!GO:0030120;vesicle coat;5.21877301260135e-09!GO:0030662;coated vesicle membrane;5.21877301260135e-09!GO:0005788;endoplasmic reticulum lumen;5.35081132206707e-09!GO:0050794;regulation of cellular process;5.57148037143303e-09!GO:0008565;protein transporter activity;5.75788772876472e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.05499644069674e-09!GO:0006888;ER to Golgi vesicle-mediated transport;7.72335749235461e-09!GO:0016881;acid-amino acid ligase activity;1.09805045732029e-08!GO:0048523;negative regulation of cellular process;1.12574858700283e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.15290619147995e-08!GO:0044431;Golgi apparatus part;1.28108722153734e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.32545765529289e-08!GO:0006366;transcription from RNA polymerase II promoter;1.42815153439682e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.63566197797454e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.63566197797454e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;1.73911370075077e-08!GO:0051276;chromosome organization and biogenesis;1.80485065464277e-08!GO:0008219;cell death;1.8848857206492e-08!GO:0016265;death;1.8848857206492e-08!GO:0009141;nucleoside triphosphate metabolic process;2.12391807691591e-08!GO:0015986;ATP synthesis coupled proton transport;2.69858242605702e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.69858242605702e-08!GO:0017038;protein import;3.47373185287312e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.71528868457506e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.71528868457506e-08!GO:0016607;nuclear speck;4.02240481821787e-08!GO:0048475;coated membrane;4.78648989529014e-08!GO:0030117;membrane coat;4.78648989529014e-08!GO:0006323;DNA packaging;4.87840479843184e-08!GO:0004386;helicase activity;5.13298722095975e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.21042402906991e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.21042402906991e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.55736708139073e-08!GO:0005773;vacuole;6.33293479653806e-08!GO:0006461;protein complex assembly;7.65853338418654e-08!GO:0009060;aerobic respiration;7.76618328417717e-08!GO:0000087;M phase of mitotic cell cycle;9.30007102088997e-08!GO:0009056;catabolic process;1.16357907487248e-07!GO:0046034;ATP metabolic process;1.33934724301401e-07!GO:0007067;mitosis;1.40742232762758e-07!GO:0006260;DNA replication;1.97012816549798e-07!GO:0019829;cation-transporting ATPase activity;2.17585470203334e-07!GO:0065002;intracellular protein transport across a membrane;2.25364591939692e-07!GO:0051188;cofactor biosynthetic process;2.51020728084986e-07!GO:0008026;ATP-dependent helicase activity;2.98844763977425e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.15206392686422e-07!GO:0004812;aminoacyl-tRNA ligase activity;3.15206392686422e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.15206392686422e-07!GO:0006754;ATP biosynthetic process;3.66882182261449e-07!GO:0006753;nucleoside phosphate metabolic process;3.66882182261449e-07!GO:0045333;cellular respiration;4.17530274069861e-07!GO:0048519;negative regulation of biological process;4.17530274069861e-07!GO:0007005;mitochondrion organization and biogenesis;4.24901637014586e-07!GO:0022403;cell cycle phase;4.4139977946105e-07!GO:0043038;amino acid activation;5.41850138535494e-07!GO:0006418;tRNA aminoacylation for protein translation;5.41850138535494e-07!GO:0043039;tRNA aminoacylation;5.41850138535494e-07!GO:0000323;lytic vacuole;5.42677398952442e-07!GO:0005764;lysosome;5.42677398952442e-07!GO:0051301;cell division;5.43593912415444e-07!GO:0016740;transferase activity;6.62139935719159e-07!GO:0015078;hydrogen ion transmembrane transporter activity;6.77240463540528e-07!GO:0032446;protein modification by small protein conjugation;7.52938572223541e-07!GO:0044440;endosomal part;7.54750608211538e-07!GO:0010008;endosome membrane;7.54750608211538e-07!GO:0043566;structure-specific DNA binding;9.45327106288834e-07!GO:0009117;nucleotide metabolic process;1.03062155270523e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.21352451885541e-06!GO:0005643;nuclear pore;1.25229663811316e-06!GO:0005694;chromosome;1.32834091341705e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.33918612687922e-06!GO:0015630;microtubule cytoskeleton;1.33918612687922e-06!GO:0000139;Golgi membrane;1.34954762404062e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.35504322554046e-06!GO:0016567;protein ubiquitination;1.44121709511958e-06!GO:0031324;negative regulation of cellular metabolic process;1.44598835690776e-06!GO:0000151;ubiquitin ligase complex;1.52181493736969e-06!GO:0016853;isomerase activity;1.74409396102859e-06!GO:0005798;Golgi-associated vesicle;1.87927770834535e-06!GO:0005770;late endosome;1.88125288917931e-06!GO:0006099;tricarboxylic acid cycle;1.97547235617767e-06!GO:0046356;acetyl-CoA catabolic process;1.97547235617767e-06!GO:0006403;RNA localization;2.28259370799321e-06!GO:0050657;nucleic acid transport;2.64148230327853e-06!GO:0051236;establishment of RNA localization;2.64148230327853e-06!GO:0050658;RNA transport;2.64148230327853e-06!GO:0045786;negative regulation of progression through cell cycle;2.65252011420031e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.73615199348398e-06!GO:0003697;single-stranded DNA binding;3.17948635874869e-06!GO:0016568;chromatin modification;3.19815936809697e-06!GO:0045259;proton-transporting ATP synthase complex;3.28458087760086e-06!GO:0051246;regulation of protein metabolic process;3.41777058304204e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;3.45733685146224e-06!GO:0016564;transcription repressor activity;3.48121071568138e-06!GO:0003924;GTPase activity;3.65067273470277e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.06430363397471e-06!GO:0003714;transcription corepressor activity;4.14364633080886e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.25710957043537e-06!GO:0043067;regulation of programmed cell death;4.65699654590112e-06!GO:0006793;phosphorus metabolic process;4.9835280152272e-06!GO:0006796;phosphate metabolic process;4.9835280152272e-06!GO:0016859;cis-trans isomerase activity;5.35492804711799e-06!GO:0006084;acetyl-CoA metabolic process;5.56858365417935e-06!GO:0042981;regulation of apoptosis;5.6488564099092e-06!GO:0009108;coenzyme biosynthetic process;5.96716789940657e-06!GO:0006364;rRNA processing;6.59145799547643e-06!GO:0016787;hydrolase activity;6.60584191815675e-06!GO:0065004;protein-DNA complex assembly;6.91421728015498e-06!GO:0004298;threonine endopeptidase activity;6.94340445277737e-06!GO:0050789;regulation of biological process;7.31363634982999e-06!GO:0000245;spliceosome assembly;7.64949657038318e-06!GO:0006916;anti-apoptosis;7.89458257567664e-06!GO:0043069;negative regulation of programmed cell death;8.53755247098559e-06!GO:0044427;chromosomal part;9.35827565455695e-06!GO:0008654;phospholipid biosynthetic process;9.81235462659267e-06!GO:0051187;cofactor catabolic process;1.11110761449587e-05!GO:0016072;rRNA metabolic process;1.1234272673685e-05!GO:0009109;coenzyme catabolic process;1.15554815862192e-05!GO:0005667;transcription factor complex;1.20890890266998e-05!GO:0016491;oxidoreductase activity;1.21385162814217e-05!GO:0031988;membrane-bound vesicle;1.28482011365232e-05!GO:0006613;cotranslational protein targeting to membrane;1.29827042015063e-05!GO:0046930;pore complex;1.33382164658722e-05!GO:0031252;leading edge;1.40673550209037e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.49254973182266e-05!GO:0009892;negative regulation of metabolic process;1.85318466642597e-05!GO:0043066;negative regulation of apoptosis;1.85524207478946e-05!GO:0006752;group transfer coenzyme metabolic process;1.89430677325469e-05!GO:0019222;regulation of metabolic process;1.90094547207379e-05!GO:0051170;nuclear import;1.90094547207379e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.05658766578981e-05!GO:0008361;regulation of cell size;2.12786988972713e-05!GO:0031982;vesicle;2.14540956568014e-05!GO:0030867;rough endoplasmic reticulum membrane;2.23142129524247e-05!GO:0006606;protein import into nucleus;2.2959431951975e-05!GO:0006333;chromatin assembly or disassembly;2.35052476559109e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.66375059042338e-05!GO:0031410;cytoplasmic vesicle;2.67674906547106e-05!GO:0005813;centrosome;3.07488538761531e-05!GO:0016049;cell growth;3.17483577911876e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.19722809740287e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.20425763138238e-05!GO:0016779;nucleotidyltransferase activity;3.37280789964446e-05!GO:0005762;mitochondrial large ribosomal subunit;3.48647124917517e-05!GO:0000315;organellar large ribosomal subunit;3.48647124917517e-05!GO:0033116;ER-Golgi intermediate compartment membrane;4.05534366897219e-05!GO:0016563;transcription activator activity;4.21238300429454e-05!GO:0016310;phosphorylation;4.25626926798041e-05!GO:0001558;regulation of cell growth;4.27303858888318e-05!GO:0005769;early endosome;4.700482103612e-05!GO:0051028;mRNA transport;4.86471887109148e-05!GO:0051427;hormone receptor binding;4.94872127839184e-05!GO:0003724;RNA helicase activity;5.06160114076964e-05!GO:0000279;M phase;5.5254573237386e-05!GO:0051789;response to protein stimulus;6.02728207828192e-05!GO:0006986;response to unfolded protein;6.02728207828192e-05!GO:0005815;microtubule organizing center;6.10197081075015e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.42148410562157e-05!GO:0016481;negative regulation of transcription;6.55596225297872e-05!GO:0005905;coated pit;7.43235242243487e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;7.69522789770081e-05!GO:0031968;organelle outer membrane;8.09787145032634e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.57011462217073e-05!GO:0035257;nuclear hormone receptor binding;0.000100963306532583!GO:0019867;outer membrane;0.000101155760402787!GO:0043021;ribonucleoprotein binding;0.000106940361643767!GO:0005525;GTP binding;0.000116274812258014!GO:0003713;transcription coactivator activity;0.000136169108882993!GO:0000785;chromatin;0.000157717776254926!GO:0044262;cellular carbohydrate metabolic process;0.000170073333988399!GO:0006612;protein targeting to membrane;0.000182178838067411!GO:0030663;COPI coated vesicle membrane;0.000192823590023014!GO:0030126;COPI vesicle coat;0.000192823590023014!GO:0008250;oligosaccharyl transferase complex;0.00019643046930215!GO:0030133;transport vesicle;0.000196954576154356!GO:0004576;oligosaccharyl transferase activity;0.000207093072428227!GO:0007243;protein kinase cascade;0.000213163840000087!GO:0005048;signal sequence binding;0.000217056516814361!GO:0045454;cell redox homeostasis;0.000231823048900115!GO:0051329;interphase of mitotic cell cycle;0.000246592865725404!GO:0015980;energy derivation by oxidation of organic compounds;0.000248594616221541!GO:0046474;glycerophospholipid biosynthetic process;0.000248594616221541!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000274796316245226!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000280196845150084!GO:0046489;phosphoinositide biosynthetic process;0.000285036588407798!GO:0000314;organellar small ribosomal subunit;0.000295950949094672!GO:0005763;mitochondrial small ribosomal subunit;0.000295950949094672!GO:0006091;generation of precursor metabolites and energy;0.000299934306282079!GO:0005885;Arp2/3 protein complex;0.00033847967668581!GO:0019899;enzyme binding;0.000356261731393828!GO:0006891;intra-Golgi vesicle-mediated transport;0.00038734589717192!GO:0006334;nucleosome assembly;0.000436677201327717!GO:0016363;nuclear matrix;0.000449024323175557!GO:0005791;rough endoplasmic reticulum;0.000449450818343182!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000473761692280361!GO:0030137;COPI-coated vesicle;0.000517564023648542!GO:0006839;mitochondrial transport;0.000518814421658016!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000525146561183702!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000550139066477019!GO:0032561;guanyl ribonucleotide binding;0.000569632405962401!GO:0019001;guanyl nucleotide binding;0.000569632405962401!GO:0005741;mitochondrial outer membrane;0.000641097014277157!GO:0043623;cellular protein complex assembly;0.000645038856026092!GO:0007010;cytoskeleton organization and biogenesis;0.000648457377009873!GO:0018196;peptidyl-asparagine modification;0.000676638471637361!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000676638471637361!GO:0007050;cell cycle arrest;0.00072878933739292!GO:0003690;double-stranded DNA binding;0.000762300548603684!GO:0003729;mRNA binding;0.000794079832529629!GO:0003899;DNA-directed RNA polymerase activity;0.000847825141903205!GO:0031497;chromatin assembly;0.000902122897441757!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000919548485499346!GO:0051920;peroxiredoxin activity;0.000949937368600602!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000968604712541061!GO:0030658;transport vesicle membrane;0.000987243782656714!GO:0043284;biopolymer biosynthetic process;0.00103495068851014!GO:0009165;nucleotide biosynthetic process;0.00103905049160847!GO:0031323;regulation of cellular metabolic process;0.00105556105849664!GO:0048522;positive regulation of cellular process;0.00108734845900775!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0011469149296337!GO:0030176;integral to endoplasmic reticulum membrane;0.00124321480513272!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00127006830836124!GO:0015399;primary active transmembrane transporter activity;0.00127006830836124!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00127023507131286!GO:0030036;actin cytoskeleton organization and biogenesis;0.00127677469896031!GO:0040008;regulation of growth;0.00131726221273915!GO:0051168;nuclear export;0.00136592960885245!GO:0007006;mitochondrial membrane organization and biogenesis;0.00139975185035403!GO:0051325;interphase;0.00142662294921807!GO:0030132;clathrin coat of coated pit;0.00149123686689619!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00150183090151306!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00150183090151306!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00150183090151306!GO:0005819;spindle;0.00155081653372837!GO:0043681;protein import into mitochondrion;0.00158466837493416!GO:0030134;ER to Golgi transport vesicle;0.00168868647809139!GO:0006626;protein targeting to mitochondrion;0.00173184199500623!GO:0006350;transcription;0.00176505510163801!GO:0045045;secretory pathway;0.00178640466445758!GO:0016044;membrane organization and biogenesis;0.00179159677900249!GO:0005774;vacuolar membrane;0.00180176692685462!GO:0008033;tRNA processing;0.00187387377718834!GO:0008186;RNA-dependent ATPase activity;0.00187387377718834!GO:0031902;late endosome membrane;0.0020325951524014!GO:0030127;COPII vesicle coat;0.00229281412445286!GO:0012507;ER to Golgi transport vesicle membrane;0.00229281412445286!GO:0006497;protein amino acid lipidation;0.00234206215115736!GO:0006414;translational elongation;0.0023675197810406!GO:0007040;lysosome organization and biogenesis;0.00237481443881195!GO:0006302;double-strand break repair;0.00243906300297862!GO:0000075;cell cycle checkpoint;0.002463441131386!GO:0006261;DNA-dependent DNA replication;0.00248249620410961!GO:0045892;negative regulation of transcription, DNA-dependent;0.00254125082606165!GO:0048500;signal recognition particle;0.00296083917668092!GO:0007033;vacuole organization and biogenesis;0.00312936078817883!GO:0030660;Golgi-associated vesicle membrane;0.00320564143571247!GO:0019843;rRNA binding;0.0032112503776431!GO:0030027;lamellipodium;0.00347022368300308!GO:0035258;steroid hormone receptor binding;0.00347137949932964!GO:0006892;post-Golgi vesicle-mediated transport;0.00369988633640656!GO:0065009;regulation of a molecular function;0.00380167569594498!GO:0065007;biological regulation;0.00380315287487183!GO:0031072;heat shock protein binding;0.00381024888109285!GO:0008047;enzyme activator activity;0.00415632803380403!GO:0006289;nucleotide-excision repair;0.00418982951284618!GO:0042802;identical protein binding;0.00422024353307624!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00425548472763592!GO:0006383;transcription from RNA polymerase III promoter;0.00427469530047569!GO:0046467;membrane lipid biosynthetic process;0.00432115080465634!GO:0006506;GPI anchor biosynthetic process;0.00433092934082493!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00459076850916946!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00459076850916946!GO:0048471;perinuclear region of cytoplasm;0.00461068576495988!GO:0004004;ATP-dependent RNA helicase activity;0.00485827777561422!GO:0006505;GPI anchor metabolic process;0.00509080624076329!GO:0044437;vacuolar part;0.00516433912163932!GO:0030521;androgen receptor signaling pathway;0.00517598146047665!GO:0030659;cytoplasmic vesicle membrane;0.00527048052142907!GO:0045792;negative regulation of cell size;0.00533745167409418!GO:0005765;lysosomal membrane;0.00541322659446386!GO:0042158;lipoprotein biosynthetic process;0.0057043142452962!GO:0007051;spindle organization and biogenesis;0.00581298737848797!GO:0000082;G1/S transition of mitotic cell cycle;0.00589355626772566!GO:0008180;signalosome;0.00589355626772566!GO:0003682;chromatin binding;0.00592992411701325!GO:0031543;peptidyl-proline dioxygenase activity;0.00596261266567263!GO:0030118;clathrin coat;0.00605965294255789!GO:0045893;positive regulation of transcription, DNA-dependent;0.0060774991032746!GO:0030308;negative regulation of cell growth;0.00614959426549508!GO:0006650;glycerophospholipid metabolic process;0.00616463811637827!GO:0030384;phosphoinositide metabolic process;0.00640247233808926!GO:0046483;heterocycle metabolic process;0.00675784910693752!GO:0005874;microtubule;0.00679531455054948!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00679706155830723!GO:0045047;protein targeting to ER;0.00679706155830723!GO:0004674;protein serine/threonine kinase activity;0.00699033710153062!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00704852908409093!GO:0006740;NADPH regeneration;0.00718112535306923!GO:0006098;pentose-phosphate shunt;0.00718112535306923!GO:0004177;aminopeptidase activity;0.00720673488980537!GO:0051539;4 iron, 4 sulfur cluster binding;0.00730428166646637!GO:0005869;dynactin complex;0.00745664478360748!GO:0030029;actin filament-based process;0.00745664478360748!GO:0017166;vinculin binding;0.0077242089445606!GO:0008092;cytoskeletal protein binding;0.00838078355570591!GO:0035035;histone acetyltransferase binding;0.00853910455586181!GO:0003711;transcription elongation regulator activity;0.00853910455586181!GO:0044433;cytoplasmic vesicle part;0.00856546848857131!GO:0046519;sphingoid metabolic process;0.00856953592165321!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00857479617999771!GO:0010468;regulation of gene expression;0.00868015404547403!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00874654748989316!GO:0003684;damaged DNA binding;0.00875681940415596!GO:0019798;procollagen-proline dioxygenase activity;0.00879707744251692!GO:0016197;endosome transport;0.00884241454664299!GO:0006402;mRNA catabolic process;0.00885295360004354!GO:0007030;Golgi organization and biogenesis;0.00914087913098463!GO:0043492;ATPase activity, coupled to movement of substances;0.00939859995358865!GO:0022890;inorganic cation transmembrane transporter activity;0.00961121682817167!GO:0006818;hydrogen transport;0.00968185563748431!GO:0008312;7S RNA binding;0.00985284200139261!GO:0015631;tubulin binding;0.00995096490929073!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0101505306452793!GO:0051087;chaperone binding;0.0102517377073902!GO:0015992;proton transport;0.0105498499480195!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0108907557392157!GO:0030125;clathrin vesicle coat;0.0108907557392157!GO:0030665;clathrin coated vesicle membrane;0.0108907557392157!GO:0009112;nucleobase metabolic process;0.0110360530365036!GO:0030880;RNA polymerase complex;0.0112080291634749!GO:0005684;U2-dependent spliceosome;0.0113386376216986!GO:0031418;L-ascorbic acid binding;0.011375343572165!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0115904997370438!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0119967624506635!GO:0045941;positive regulation of transcription;0.0120253561144541!GO:0030518;steroid hormone receptor signaling pathway;0.012438547438779!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0126130702712556!GO:0048487;beta-tubulin binding;0.0128614403873494!GO:0031901;early endosome membrane;0.0128945450998119!GO:0012506;vesicle membrane;0.013002741263344!GO:0006672;ceramide metabolic process;0.0130066278403121!GO:0050681;androgen receptor binding;0.0132219981344931!GO:0000059;protein import into nucleus, docking;0.0132771813926421!GO:0007264;small GTPase mediated signal transduction;0.0133219773836461!GO:0005832;chaperonin-containing T-complex;0.0133219773836461!GO:0003678;DNA helicase activity;0.0134052537502437!GO:0005586;collagen type III;0.0135650241932469!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0137834090318522!GO:0008094;DNA-dependent ATPase activity;0.0139113385496151!GO:0051252;regulation of RNA metabolic process;0.0140932037916587!GO:0003746;translation elongation factor activity;0.0142444994022769!GO:0006352;transcription initiation;0.0142836142915615!GO:0000339;RNA cap binding;0.0143953485543865!GO:0003923;GPI-anchor transamidase activity;0.0144181430413575!GO:0016255;attachment of GPI anchor to protein;0.0144181430413575!GO:0042765;GPI-anchor transamidase complex;0.0144181430413575!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0145459284855162!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.014548395454987!GO:0005637;nuclear inner membrane;0.0146063516994955!GO:0000209;protein polyubiquitination;0.014822371923004!GO:0003756;protein disulfide isomerase activity;0.0149612946663809!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0149612946663809!GO:0043022;ribosome binding;0.0151788614782584!GO:0005801;cis-Golgi network;0.0154716671575455!GO:0008632;apoptotic program;0.0156853125734952!GO:0006897;endocytosis;0.016240928537481!GO:0010324;membrane invagination;0.016240928537481!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0165771963762833!GO:0008139;nuclear localization sequence binding;0.0168586865601026!GO:0016251;general RNA polymerase II transcription factor activity;0.0170222146181122!GO:0009967;positive regulation of signal transduction;0.0172496581583187!GO:0007088;regulation of mitosis;0.0172925877707078!GO:0008022;protein C-terminus binding;0.0176739000822132!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0182669381379605!GO:0001726;ruffle;0.0188974943066932!GO:0045936;negative regulation of phosphate metabolic process;0.0193832032576641!GO:0005862;muscle thin filament tropomyosin;0.0194792360483753!GO:0016741;transferase activity, transferring one-carbon groups;0.0195444790952088!GO:0008168;methyltransferase activity;0.0199670430784706!GO:0006007;glucose catabolic process;0.0200346796387662!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0202150739520649!GO:0000428;DNA-directed RNA polymerase complex;0.0202150739520649!GO:0003702;RNA polymerase II transcription factor activity;0.0202814637681349!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.020626035505622!GO:0007093;mitotic cell cycle checkpoint;0.02084113676032!GO:0030149;sphingolipid catabolic process;0.0214035161772851!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.021434972809084!GO:0044452;nucleolar part;0.0215593242714655!GO:0031124;mRNA 3'-end processing;0.0217603192491901!GO:0032940;secretion by cell;0.0226000385221315!GO:0008287;protein serine/threonine phosphatase complex;0.0229116225377549!GO:0045926;negative regulation of growth;0.0229978241928642!GO:0042585;germinal vesicle;0.0232735120083536!GO:0032774;RNA biosynthetic process;0.0233176009324132!GO:0043087;regulation of GTPase activity;0.0235908414224595!GO:0008484;sulfuric ester hydrolase activity;0.0239162537741884!GO:0000287;magnesium ion binding;0.0239401436494702!GO:0031625;ubiquitin protein ligase binding;0.0241264510586863!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0243182928424903!GO:0006351;transcription, DNA-dependent;0.0243182928424903!GO:0022408;negative regulation of cell-cell adhesion;0.024346680929276!GO:0005657;replication fork;0.024362391974168!GO:0048144;fibroblast proliferation;0.0246550058244491!GO:0048145;regulation of fibroblast proliferation;0.0246550058244491!GO:0007034;vacuolar transport;0.0247498722729861!GO:0006144;purine base metabolic process;0.0252784901673909!GO:0030119;AP-type membrane coat adaptor complex;0.0256612797459524!GO:0051052;regulation of DNA metabolic process;0.0259044828448868!GO:0005876;spindle microtubule;0.0261397570290233!GO:0031529;ruffle organization and biogenesis;0.0264103590268634!GO:0006354;RNA elongation;0.0265385392431573!GO:0051287;NAD binding;0.0266095914404591!GO:0032984;macromolecular complex disassembly;0.0268194933808504!GO:0016272;prefoldin complex;0.0269406091884566!GO:0022406;membrane docking;0.027292527471678!GO:0048278;vesicle docking;0.027292527471678!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0274639772340481!GO:0010257;NADH dehydrogenase complex assembly;0.0274639772340481!GO:0033108;mitochondrial respiratory chain complex assembly;0.0274639772340481!GO:0001527;microfibril;0.0274639772340481!GO:0006595;polyamine metabolic process;0.0275329165089499!GO:0043624;cellular protein complex disassembly;0.0282227054985844!GO:0006378;mRNA polyadenylation;0.0283631412727066!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0283631412727066!GO:0015002;heme-copper terminal oxidase activity;0.0283631412727066!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0283631412727066!GO:0004129;cytochrome-c oxidase activity;0.0283631412727066!GO:0006611;protein export from nucleus;0.0287616693361264!GO:0008610;lipid biosynthetic process;0.0290157677784126!GO:0006401;RNA catabolic process;0.0295193978784256!GO:0000049;tRNA binding;0.0296245180904098!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0299140293520293!GO:0006509;membrane protein ectodomain proteolysis;0.0299817017566825!GO:0033619;membrane protein proteolysis;0.0299817017566825!GO:0006310;DNA recombination;0.0301730830251695!GO:0006984;ER-nuclear signaling pathway;0.0308990751097446!GO:0051540;metal cluster binding;0.030989261620024!GO:0051536;iron-sulfur cluster binding;0.030989261620024!GO:0008629;induction of apoptosis by intracellular signals;0.0314323317404221!GO:0004656;procollagen-proline 4-dioxygenase activity;0.031970855887749!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.031970855887749!GO:0006739;NADP metabolic process;0.032186991499214!GO:0048468;cell development;0.0324828035467544!GO:0000118;histone deacetylase complex;0.0329178021421075!GO:0016126;sterol biosynthetic process;0.0333325107629787!GO:0050790;regulation of catalytic activity;0.0348291971533426!GO:0006368;RNA elongation from RNA polymerase II promoter;0.035490186123092!GO:0006904;vesicle docking during exocytosis;0.0355173690836935!GO:0031371;ubiquitin conjugating enzyme complex;0.0357084276044358!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0357084276044358!GO:0043433;negative regulation of transcription factor activity;0.0359142464695453!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.035966192043606!GO:0005758;mitochondrial intermembrane space;0.0360837828644673!GO:0000776;kinetochore;0.0361112488645547!GO:0005975;carbohydrate metabolic process;0.0365133971945159!GO:0042326;negative regulation of phosphorylation;0.0375162033037377!GO:0005784;translocon complex;0.0382748504434698!GO:0007017;microtubule-based process;0.0382748504434698!GO:0051128;regulation of cellular component organization and biogenesis;0.0383657599010895!GO:0030522;intracellular receptor-mediated signaling pathway;0.0383657599010895!GO:0030911;TPR domain binding;0.0384595625317673!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0385846177803219!GO:0046914;transition metal ion binding;0.0392423186494549!GO:0019377;glycolipid catabolic process;0.0393260921300275!GO:0042026;protein refolding;0.0397562301158395!GO:0032508;DNA duplex unwinding;0.0400055664885133!GO:0032392;DNA geometric change;0.0400055664885133!GO:0006607;NLS-bearing substrate import into nucleus;0.0403738421890826!GO:0000726;non-recombinational repair;0.0407526013035437!GO:0016408;C-acyltransferase activity;0.0408360973123486!GO:0008143;poly(A) binding;0.0411688270014666!GO:0048146;positive regulation of fibroblast proliferation;0.0411688270014666!GO:0030131;clathrin adaptor complex;0.0413806221671781!GO:0001953;negative regulation of cell-matrix adhesion;0.041942799204098!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0422505084533099!GO:0030508;thiol-disulfide exchange intermediate activity;0.0423354579072101!GO:0050811;GABA receptor binding;0.042364084496116!GO:0000775;chromosome, pericentric region;0.0425938302537047!GO:0048593;camera-type eye morphogenesis;0.0427473137008093!GO:0006405;RNA export from nucleus;0.0428086391046031!GO:0004563;beta-N-acetylhexosaminidase activity;0.0428086391046031!GO:0007052;mitotic spindle organization and biogenesis;0.0428514028653639!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0430706755359145!GO:0043241;protein complex disassembly;0.0434780898204407!GO:0008538;proteasome activator activity;0.0442165344385242!GO:0048518;positive regulation of biological process;0.0442165344385242!GO:0005096;GTPase activator activity;0.044958143445586!GO:0043488;regulation of mRNA stability;0.0452019874053113!GO:0043487;regulation of RNA stability;0.0452019874053113!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0459100996441423!GO:0007041;lysosomal transport;0.0462250149909939!GO:0042770;DNA damage response, signal transduction;0.0462250149909939!GO:0008270;zinc ion binding;0.0467932251893604!GO:0000152;nuclear ubiquitin ligase complex;0.0470896471253952!GO:0006778;porphyrin metabolic process;0.0471084420734407!GO:0033013;tetrapyrrole metabolic process;0.0471084420734407!GO:0050662;coenzyme binding;0.0475811181626405!GO:0031970;organelle envelope lumen;0.0476049218370934!GO:0008320;protein transmembrane transporter activity;0.0482225123148153!GO:0045449;regulation of transcription;0.0482225123148153!GO:0009116;nucleoside metabolic process;0.049023680276812!GO:0043065;positive regulation of apoptosis;0.0493133543540348!GO:0045334;clathrin-coated endocytic vesicle;0.0493439375213959!GO:0031123;RNA 3'-end processing;0.0495541819410264!GO:0016301;kinase activity;0.0498029670064303!GO:0004003;ATP-dependent DNA helicase activity;0.0498029670064303
|sample_id=10782
|sample_id=10782
|sample_note=
|sample_note=
Line 76: Line 98:
|sample_tissue=retroperitoneum
|sample_tissue=retroperitoneum
|top_motifs=EVI1:2.17165339971;NKX3-1:2.01210709223;HMGA1,2:1.97304796213;ALX4:1.56333786549;TAL1_TCF{3,4,12}:1.55215555339;HIF1A:1.42365290997;ZNF384:1.40122415953;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.37633085799;AIRE:1.34320052414;POU3F1..4:1.28745970509;RXR{A,B,G}:1.2327353161;HOX{A5,B5}:1.21453872189;NR3C1:1.15931973226;ATF6:1.11080649263;NANOG{mouse}:1.01402961755;TBX4,5:0.991847401845;DBP:0.990926045168;RXRA_VDR{dimer}:0.974226508142;PAX4:0.967759201339;TOPORS:0.952757513539;UFEwm:0.952458006037;HSF1,2:0.94604190202;TEAD1:0.891687769119;PDX1:0.841771297911;PAX8:0.839265887598;FOXD3:0.813436815621;IKZF1:0.786520075549;HOX{A4,D4}:0.77301387783;ADNP_IRX_SIX_ZHX:0.768884513646;PITX1..3:0.755628924905;PRDM1:0.737859395628;NR1H4:0.73324314806;EN1,2:0.716961467802;TFAP2{A,C}:0.710008899324;GZF1:0.703420863173;HBP1_HMGB_SSRP1_UBTF:0.700238551302;AHR_ARNT_ARNT2:0.692403371697;GFI1B:0.670152028124;XBP1:0.668284007832;TP53:0.63088813036;PRRX1,2:0.622111095436;ZBTB16:0.615176963674;SOX17:0.600793717104;GTF2A1,2:0.59182392876;HES1:0.586245111218;TFAP2B:0.5708977323;NKX2-2,8:0.569514624064;ARID5B:0.511153153155;MZF1:0.478391451771;TFAP4:0.470180091398;NKX6-1,2:0.466261488957;NFE2L1:0.44635012767;ZNF143:0.426169512184;YY1:0.423301227993;CDC5L:0.411594848961;MTE{core}:0.408076373897;HIC1:0.406215013948;GTF2I:0.404987214104;ZBTB6:0.384394470409;BACH2:0.359601314421;NRF1:0.356381115376;MAZ:0.349779466171;ELK1,4_GABP{A,B1}:0.345173284899;KLF4:0.331275003966;FOXM1:0.325060284397;TLX1..3_NFIC{dimer}:0.318164401083;TFCP2:0.309515936348;PPARG:0.309410132781;NR6A1:0.309295403538;NFATC1..3:0.275650821952;FOXA2:0.27409997908;EBF1:0.269232054195;NKX3-2:0.248540579123;FOXN1:0.243195980433;SPZ1:0.237769925277;SRF:0.236152935519;GFI1:0.221834885862;GLI1..3:0.206907512878;ESR1:0.204232149768;NFE2L2:0.194424472147;SREBF1,2:0.17741283578;TEF:0.166423957094;CDX1,2,4:0.163919649345;MYBL2:0.162954839398;POU6F1:0.160485287489;SMAD1..7,9:0.150266348892;ZNF238:0.142929904997;LEF1_TCF7_TCF7L1,2:0.135433562823;MED-1{core}:0.129781771021;LHX3,4:0.117106059611;FOXL1:0.106462424559;FOSL2:0.102955513109;MYFfamily:0.101983679307;STAT5{A,B}:0.0995118019813;STAT1,3:0.0990687251443;NFE2:0.094864465918;PAX2:0.0874958389586;ZIC1..3:0.0665463406292;CREB1:0.0570730334843;FOXP1:0.0561058023716;ONECUT1,2:0.0463906976993;MAFB:0.0430431729126;GATA4:0.0296019556192;HMX1:0.0264399622254;PBX1:-0.00364995456864;FOS_FOS{B,L1}_JUN{B,D}:-0.0123408895321;IRF1,2:-0.0161523354514;PAX6:-0.0184712956428;REST:-0.0609559262854;NKX2-3_NKX2-5:-0.0861280544892;ZFP161:-0.0990588989026;HNF1A:-0.106058827751;RUNX1..3:-0.115596450386;NKX2-1,4:-0.127222519753;STAT2,4,6:-0.141889475185;PAX1,9:-0.153989924422;BREu{core}:-0.160489913786;HLF:-0.161539565331;SOX2:-0.169333877152;NHLH1,2:-0.177804092441;TFDP1:-0.180522738656;GCM1,2:-0.182435183759;E2F1..5:-0.187348382202;POU1F1:-0.20748458227;bHLH_family:-0.208265329847;IKZF2:-0.210967164503;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.229795343058;MYB:-0.247807330669;EGR1..3:-0.259363450329;SP1:-0.319558755317;ZNF148:-0.333937175166;OCT4_SOX2{dimer}:-0.339976011498;PATZ1:-0.351519179017;HNF4A_NR2F1,2:-0.35644285777;ELF1,2,4:-0.362134305906;ATF5_CREB3:-0.364548629838;NFY{A,B,C}:-0.370429293417;XCPE1{core}:-0.370868441662;MEF2{A,B,C,D}:-0.384528052805;NFKB1_REL_RELA:-0.408277469932;SOX{8,9,10}:-0.412389274392;MTF1:-0.422906911623;RREB1:-0.430572825295;SPI1:-0.44421422114;DMAP1_NCOR{1,2}_SMARC:-0.456769999035;PAX3,7:-0.480310846781;RFX1:-0.484419695699;ATF2:-0.498803422222;JUN:-0.499255705199;SPIB:-0.504222143472;ALX1:-0.515621313806;CRX:-0.522882923762;AR:-0.52362256466;TGIF1:-0.533198674107;IRF7:-0.539686569081;TLX2:-0.544476050606;FOXQ1:-0.610746990962;ETS1,2:-0.642580769868;T:-0.65058535752;NFIX:-0.679108273563;CUX2:-0.679175625985;LMO2:-0.728168598592;ESRRA:-0.731230477054;FOXO1,3,4:-0.732304986969;NANOG:-0.753777433492;GATA6:-0.766638017613;RORA:-0.767128120899;HOXA9_MEIS1:-0.772483185669;FOX{D1,D2}:-0.777754691209;HAND1,2:-0.794002213744;TBP:-0.824122389293;EP300:-0.828074750096;ATF4:-0.828318105737;FOX{I1,J2}:-0.841094281639;RBPJ:-0.852860537556;PAX5:-0.887061338005;POU5F1:-0.893597239271;POU2F1..3:-0.912861360235;CEBPA,B_DDIT3:-0.933651588455;FOXP3:-1.0229307021;RFX2..5_RFXANK_RFXAP:-1.03532078937;VSX1,2:-1.05420736869;BPTF:-1.06467511486;FOX{F1,F2,J1}:-1.08454718096;NFIL3:-1.11167778787;NR5A1,2:-1.18081341891;HOX{A6,A7,B6,B7}:-1.18157381954;SNAI1..3:-1.24015095309;ZNF423:-1.27803228021;ZEB1:-1.29413735456;MYOD1:-1.3127963092;SOX5:-1.51575578575
|top_motifs=EVI1:2.17165339971;NKX3-1:2.01210709223;HMGA1,2:1.97304796213;ALX4:1.56333786549;TAL1_TCF{3,4,12}:1.55215555339;HIF1A:1.42365290997;ZNF384:1.40122415953;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.37633085799;AIRE:1.34320052414;POU3F1..4:1.28745970509;RXR{A,B,G}:1.2327353161;HOX{A5,B5}:1.21453872189;NR3C1:1.15931973226;ATF6:1.11080649263;NANOG{mouse}:1.01402961755;TBX4,5:0.991847401845;DBP:0.990926045168;RXRA_VDR{dimer}:0.974226508142;PAX4:0.967759201339;TOPORS:0.952757513539;UFEwm:0.952458006037;HSF1,2:0.94604190202;TEAD1:0.891687769119;PDX1:0.841771297911;PAX8:0.839265887598;FOXD3:0.813436815621;IKZF1:0.786520075549;HOX{A4,D4}:0.77301387783;ADNP_IRX_SIX_ZHX:0.768884513646;PITX1..3:0.755628924905;PRDM1:0.737859395628;NR1H4:0.73324314806;EN1,2:0.716961467802;TFAP2{A,C}:0.710008899324;GZF1:0.703420863173;HBP1_HMGB_SSRP1_UBTF:0.700238551302;AHR_ARNT_ARNT2:0.692403371697;GFI1B:0.670152028124;XBP1:0.668284007832;TP53:0.63088813036;PRRX1,2:0.622111095436;ZBTB16:0.615176963674;SOX17:0.600793717104;GTF2A1,2:0.59182392876;HES1:0.586245111218;TFAP2B:0.5708977323;NKX2-2,8:0.569514624064;ARID5B:0.511153153155;MZF1:0.478391451771;TFAP4:0.470180091398;NKX6-1,2:0.466261488957;NFE2L1:0.44635012767;ZNF143:0.426169512184;YY1:0.423301227993;CDC5L:0.411594848961;MTE{core}:0.408076373897;HIC1:0.406215013948;GTF2I:0.404987214104;ZBTB6:0.384394470409;BACH2:0.359601314421;NRF1:0.356381115376;MAZ:0.349779466171;ELK1,4_GABP{A,B1}:0.345173284899;KLF4:0.331275003966;FOXM1:0.325060284397;TLX1..3_NFIC{dimer}:0.318164401083;TFCP2:0.309515936348;PPARG:0.309410132781;NR6A1:0.309295403538;NFATC1..3:0.275650821952;FOXA2:0.27409997908;EBF1:0.269232054195;NKX3-2:0.248540579123;FOXN1:0.243195980433;SPZ1:0.237769925277;SRF:0.236152935519;GFI1:0.221834885862;GLI1..3:0.206907512878;ESR1:0.204232149768;NFE2L2:0.194424472147;SREBF1,2:0.17741283578;TEF:0.166423957094;CDX1,2,4:0.163919649345;MYBL2:0.162954839398;POU6F1:0.160485287489;SMAD1..7,9:0.150266348892;ZNF238:0.142929904997;LEF1_TCF7_TCF7L1,2:0.135433562823;MED-1{core}:0.129781771021;LHX3,4:0.117106059611;FOXL1:0.106462424559;FOSL2:0.102955513109;MYFfamily:0.101983679307;STAT5{A,B}:0.0995118019813;STAT1,3:0.0990687251443;NFE2:0.094864465918;PAX2:0.0874958389586;ZIC1..3:0.0665463406292;CREB1:0.0570730334843;FOXP1:0.0561058023716;ONECUT1,2:0.0463906976993;MAFB:0.0430431729126;GATA4:0.0296019556192;HMX1:0.0264399622254;PBX1:-0.00364995456864;FOS_FOS{B,L1}_JUN{B,D}:-0.0123408895321;IRF1,2:-0.0161523354514;PAX6:-0.0184712956428;REST:-0.0609559262854;NKX2-3_NKX2-5:-0.0861280544892;ZFP161:-0.0990588989026;HNF1A:-0.106058827751;RUNX1..3:-0.115596450386;NKX2-1,4:-0.127222519753;STAT2,4,6:-0.141889475185;PAX1,9:-0.153989924422;BREu{core}:-0.160489913786;HLF:-0.161539565331;SOX2:-0.169333877152;NHLH1,2:-0.177804092441;TFDP1:-0.180522738656;GCM1,2:-0.182435183759;E2F1..5:-0.187348382202;POU1F1:-0.20748458227;bHLH_family:-0.208265329847;IKZF2:-0.210967164503;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.229795343058;MYB:-0.247807330669;EGR1..3:-0.259363450329;SP1:-0.319558755317;ZNF148:-0.333937175166;OCT4_SOX2{dimer}:-0.339976011498;PATZ1:-0.351519179017;HNF4A_NR2F1,2:-0.35644285777;ELF1,2,4:-0.362134305906;ATF5_CREB3:-0.364548629838;NFY{A,B,C}:-0.370429293417;XCPE1{core}:-0.370868441662;MEF2{A,B,C,D}:-0.384528052805;NFKB1_REL_RELA:-0.408277469932;SOX{8,9,10}:-0.412389274392;MTF1:-0.422906911623;RREB1:-0.430572825295;SPI1:-0.44421422114;DMAP1_NCOR{1,2}_SMARC:-0.456769999035;PAX3,7:-0.480310846781;RFX1:-0.484419695699;ATF2:-0.498803422222;JUN:-0.499255705199;SPIB:-0.504222143472;ALX1:-0.515621313806;CRX:-0.522882923762;AR:-0.52362256466;TGIF1:-0.533198674107;IRF7:-0.539686569081;TLX2:-0.544476050606;FOXQ1:-0.610746990962;ETS1,2:-0.642580769868;T:-0.65058535752;NFIX:-0.679108273563;CUX2:-0.679175625985;LMO2:-0.728168598592;ESRRA:-0.731230477054;FOXO1,3,4:-0.732304986969;NANOG:-0.753777433492;GATA6:-0.766638017613;RORA:-0.767128120899;HOXA9_MEIS1:-0.772483185669;FOX{D1,D2}:-0.777754691209;HAND1,2:-0.794002213744;TBP:-0.824122389293;EP300:-0.828074750096;ATF4:-0.828318105737;FOX{I1,J2}:-0.841094281639;RBPJ:-0.852860537556;PAX5:-0.887061338005;POU5F1:-0.893597239271;POU2F1..3:-0.912861360235;CEBPA,B_DDIT3:-0.933651588455;FOXP3:-1.0229307021;RFX2..5_RFXANK_RFXAP:-1.03532078937;VSX1,2:-1.05420736869;BPTF:-1.06467511486;FOX{F1,F2,J1}:-1.08454718096;NFIL3:-1.11167778787;NR5A1,2:-1.18081341891;HOX{A6,A7,B6,B7}:-1.18157381954;SNAI1..3:-1.24015095309;ZNF423:-1.27803228021;ZEB1:-1.29413735456;MYOD1:-1.3127963092;SOX5:-1.51575578575
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10782-110G8;search_select_hide=table117:FF:10782-110G8
}}
}}

Latest revision as of 15:04, 3 June 2020

Name:liposarcoma cell line:KMLS-1
Species:Human (Homo sapiens)
Library ID:CNhs11870
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueretroperitoneum
dev stageNA
sexfemale
ageunknown
cell typeadipocyte
cell lineKMLS-1
companyJAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005621
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11870 CAGE DRX007920 DRR008792
Accession ID Hg19

Library idBAMCTSS
CNhs11870 DRZ000217 DRZ001602
Accession ID Hg38

Library idBAMCTSS
CNhs11870 DRZ011567 DRZ012952
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.231
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0272
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.721
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.034
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.166
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar1.088
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.00711
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.127
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.129
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.189
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0683
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.237
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.268
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-6.31285e-4
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0683
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.127
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.707
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.609
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.341
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.551
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.864
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11870

Jaspar motifP-value
MA0002.20.115
MA0003.10.319
MA0004.10.884
MA0006.10.562
MA0007.10.673
MA0009.10.0129
MA0014.10.375
MA0017.10.126
MA0018.20.0547
MA0019.10.397
MA0024.10.0701
MA0025.10.00366
MA0027.10.574
MA0028.10.163
MA0029.10.0684
MA0030.10.00606
MA0031.10.00566
MA0035.20.0176
MA0038.10.412
MA0039.20.00182
MA0040.10.341
MA0041.10.357
MA0042.10.888
MA0043.10.00217
MA0046.10.0431
MA0047.20.0465
MA0048.10.107
MA0050.10.0393
MA0051.10.268
MA0052.17.20182e-5
MA0055.10.792
MA0057.10.876
MA0058.10.914
MA0059.10.866
MA0060.10.0161
MA0061.18.31631e-4
MA0062.20.605
MA0065.20.00725
MA0066.10.292
MA0067.10.135
MA0068.10.0407
MA0069.10.0234
MA0070.10.135
MA0071.10.594
MA0072.10.424
MA0073.10.774
MA0074.10.689
MA0076.10.0787
MA0077.10.376
MA0078.10.239
MA0079.20.717
MA0080.21.7529e-10
MA0081.10.0976
MA0083.10.193
MA0084.10.53
MA0087.10.387
MA0088.10.7
MA0090.10.00284
MA0091.10.712
MA0092.10.997
MA0093.10.953
MA0099.27.63838e-4
MA0100.10.27
MA0101.17.16227e-4
MA0102.27.48404e-4
MA0103.16.9491e-7
MA0104.20.11
MA0105.10.00549
MA0106.10.111
MA0107.19.88759e-4
MA0108.23.3005e-5
MA0111.10.808
MA0112.20.0931
MA0113.10.794
MA0114.10.0673
MA0115.10.206
MA0116.10.0339
MA0117.10.982
MA0119.10.632
MA0122.10.389
MA0124.10.0487
MA0125.10.064
MA0131.10.549
MA0135.10.306
MA0136.11.33944e-10
MA0137.20.783
MA0138.20.911
MA0139.10.728
MA0140.10.216
MA0141.10.114
MA0142.10.106
MA0143.10.207
MA0144.10.487
MA0145.10.361
MA0146.10.441
MA0147.10.125
MA0148.10.0331
MA0149.10.635
MA0150.10.311
MA0152.10.426
MA0153.10.145
MA0154.10.00284
MA0155.10.536
MA0156.16.16546e-5
MA0157.10.043
MA0159.10.097
MA0160.10.0393
MA0162.10.938
MA0163.10.834
MA0164.10.218
MA0258.10.135
MA0259.10.821



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11870

Novel motifP-value
10.602
100.641
1000.454
1010.786
1020.695
1030.895
1040.442
1050.29
1060.0809
1070.282
1080.115
1090.295
110.36
1100.361
1110.781
1120.836
1130.026
1140.448
1150.852
1160.279
1170.541
1180.629
1190.897
120.519
1200.968
1210.992
1220.0269
1230.881
1240.903
1250.767
1260.0452
1270.745
1280.239
1290.467
130.15
1300.541
1310.501
1320.327
1330.62
1340.863
1350.241
1360.742
1370.636
1380.906
1390.969
140.244
1400.78
1410.103
1420.951
1430.528
1440.265
1450.431
1460.0866
1470.229
1480.793
1490.922
150.0884
1500.182
1510.2
1520.897
1530.792
1540.261
1550.172
1560.54
1570.774
1580.0152
1590.158
160.369
1600.103
1610.013
1620.269
1630.297
1640.645
1650.619
1660.147
1670.488
1680.157
1690.319
170.893
180.444
190.527
20.871
200.756
210.256
220.701
230.119
240.58
250.0806
260.91
270.467
280.469
290.473
30.569
300.494
310.743
327.64878e-6
330.475
340.356
350.781
360.102
370.864
380.194
390.553
40.948
400.00726
410.209
420.445
430.455
440.807
450.21
460.861
470.583
480.582
490.252
50.608
500.824
510.529
520.202
530.729
540.559
550.0335
560.888
570.783
580.259
590.221
60.668
600.0608
610.699
620.295
630.413
640.354
650.248
660.51
670.914
680.629
690.711
70.0229
700.158
710.818
720.281
730.889
740.323
750.762
760.95
770.914
780.551
790.261
80.913
800.25
810.947
820.601
830.513
840.784
850.373
860.666
870.636
880.649
890.616
90.33
900.273
910.169
920.999
930.776
940.813
950.88
960.749
970.605
980.00588
990.312



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11870


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
1115 (sarcoma)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100400 (sarcoma cell line sample)
0103744 (liposarcoma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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