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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|DRA_sample_Accession=CAGE@SAMD00005976
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000144,CL:0000723,CL:0000048,CL:0000988,CL:0000548,CL:0000034,CL:0002032,CL:0000012,CL:0002320,CL:0000063,CL:0002371,CL:0000542,CL:0000219,CL:0000004,CL:0000134,CL:0000738,CL:0002087,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002420,CL:0002419,CL:0000624,CL:0000790,CL:0000838,CL:0002031,CL:0000827,CL:0000037,CL:0000566,CL:0000837,CL:0000051
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005976
|accession_numbers=CAGE;DRX008177;DRR009049;DRZ000474;DRZ001859;DRZ011824;DRZ013209
|accession_numbers_RNASeq=sRNA-Seq;DRX037136;DRR041502;DRZ007144
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000624
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000031
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr19:45971246..45971265,+!p1@FOSB!2.07!2043.66!FOSB;;chr1:25256756..25256774,-!p1@RUNX3!2.06!205.94!RUNX3;;chr2:157189180..157189290,-!p1@NR4A2!1.97!461.00!NR4A2;;chr10:8096631..8096660,+!p1@GATA3!1.97!109.65!GATA3;;chr14:75746722..75746777,+!p2@FOS!1.93!107.68!FOS;;chr3:63953435..63953499,+!p1@ATXN7!1.93!84.89!ATXN7;;chr5:133451294..133451310,+!p2@TCF7!1.92!82.53!TCF7;;chr7:50343634..50343717,+!p2@IKZF1!1.87!73.10!IKZF1;;chr5:133450365..133450444,+!p1@TCF7!1.86!307.33!TCF7;;chr19:54058073..54058088,+!p1@ZNF331!1.86!70.74!ZNF331;;chr2:192015701..192015743,-!p1@STAT4!1.83!90.00!STAT4;;chr10:8096772..8096787,+!p2@GATA3!1.83!78.21!GATA3;;chr15:60884706..60884743,-!p1@RORA!1.81!311.66!RORA;;chr14:75745523..75745537,+!p1@FOS!1.80!6940.57!FOS;;chr9:102584262..102584276,+!p1@NR4A3!1.79!131.27!NR4A3;;chr20:50159198..50159299,-!p1@NFATC2!1.76!82.14!NFATC2;;chr6:91006518..91006570,-!p1@BACH2!1.75!124.19!BACH2;;chrX:106960285..106960299,-!p1@TSC22D3!1.74!1359.42!TSC22D3;;chr19:54041669..54041697,+!p2@ZNF331!1.72!51.09!ZNF331;;chr9:3525727..3525828,-!p2@RFX3!1.69!117.51!RFX3;;chr2:231090433..231090469,+!p1@SP140!1.67!45.59!SP140;;chrY:21906594..21906622,-!p1@KDM5D!1.61!39.30!KDM5D;;chr3:71355163..71355209,-!p5@FOXP1!1.60!52.66!FOXP1;;chr19:16435625..16435682,+!p1@KLF2!1.58!1123.22!KLF2;;chr3:39195075..39195088,-!p1@CSRNP1!1.58!219.69!CSRNP1;;chr19:19729477..19729542,-!p1@PBX4!1.54!70.35!PBX4;;chr3:18486354..18486377,-!p2@SATB1!1.54!42.05!SATB1;;chr17:38020392..38020477,-!p1@IKZF3!1.54!33.80!IKZF3;;chr19:16435423..16435484,+!p5@KLF2!1.54!33.41!KLF2;;chr10:3824332..3824425,-!p4@KLF6!1.53!52.27!KLF6;;chr4:109087445..109087463,-!p1@LEF1!1.52!31.83!LEF1;;chr9:102584241..102584261,+!p4@NR4A3!1.50!46.77!NR4A3;;chrX:106960180..106960197,-!p2@TSC22D3!1.49!109.65!TSC22D3;;chr10:35484053..35484076,+!p1@CREM!1.48!71.53!CREM;;chr6:106546808..106546833,+!p3@PRDM1!1.48!36.55!PRDM1;;chr2:192015750..192015793,-!p2@STAT4!1.46!37.34!STAT4;;chr19:12902289..12902307,+!p1@JUNB!1.45!5871.97!JUNB;;chr1:59249688..59249703,-!p3@JUN!1.45!157.99!JUN;;chr7:50343895..50343936,+!p5@IKZF1!1.44!26.72!IKZF1;;chr3:71542615..71542644,-!p12@FOXP1!1.43!25.94!FOXP1;;chr9:117150254..117150271,-!p1@AKNA!1.42!67.99!AKNA;;chr6:391743..391759,+!p1@IRF4!1.42!25.15!IRF4;;chr7:104654718..104654741,+!p3@MLL5!1.41!35.76!MLL5;;chr12:72056800..72056834,+!p1@THAP2!1.41!33.41!THAP2;;chr8:123793988..123794016,+!p1@ZHX2!1.40!41.66!ZHX2;;chr2:157189617..157189667,-!p4@NR4A2!1.40!24.37!NR4A2;;chr9:102584128..102584144,+!p3@NR4A3!1.39!44.02!NR4A3;;chr14:35873947..35873965,-!p1@NFKBIA!1.38!1382.61!NFKBIA;;chr3:71542684..71542720,-!p18@FOXP1!1.38!23.19!FOXP1;;chr5:131826457..131826514,-!p1@IRF1!1.37!843.40!IRF1;;chr11:67007548..67007610,+!p3@KDM2A!1.37!161.53!KDM2A;;chr6:12009042..12009092,+!p6@HIVEP1!1.37!28.69!HIVEP1;;chr4:109090075..109090095,-!p2@LEF1!1.37!22.40!LEF1;;chr14:99738138..99738163,-!p1@BCL11B!1.37!22.40!BCL11B;;chr3:23986824..23986848,+!p2@NR1D2!1.36!119.08!NR1D2;;chr14:64971288..64971316,-!p2@ZBTB25!1.36!66.03!ZBTB25;;chr6:91006575..91006602,-!p2@BACH2!1.36!32.23!BACH2;;chr8:81397846..81397860,+!p3@ZBTB10!1.36!27.12!ZBTB10;;chr17:38497662..38497713,+!p4@RARA!1.36!25.15!RARA;;chr4:103422499..103422632,+!p1@NFKB1!1.35!429.56!NFKB1;;chrX:106960221..106960236,-!p3@TSC22D3!1.35!58.56!TSC22D3;;chr14:35872453..35872485,-!p2@NFKBIA!1.35!51.48!NFKBIA;;chr2:43453734..43453751,-!p1@ZFP36L2!1.34!2125.40!ZFP36L2;;chr15:60884747..60884774,-!p3@RORA!1.34!50.31!RORA;;chr2:97202480..97202499,+!p1@ARID5A!1.33!200.44!ARID5A;;chr19:54041645..54041661,+!p5@ZNF331!1.33!20.44!ZNF331;;chr20:51588873..51588953,+!p1@TSHZ2!1.32!26.33!TSHZ2;;chr3:71542651..71542683,-!p22@FOXP1!1.31!19.26!FOXP1;;chr1:59249707..59249727,-!p1@JUN!1.30!767.94!JUN;;chr7:104654690..104654704,+!p2@MLL5!1.30!36.94!MLL5;;chr8:81397820..81397836,+!p2@ZBTB10!1.29!23.19!ZBTB10;;chr5:133451347..133451358,+!p3@TCF7!1.29!18.47!TCF7;;chr18:46475696..46475713,-!p1@SMAD7!1.28!20.44!SMAD7;;chr7:17338324..17338341,+!p3@AHR!1.27!57.77!AHR;;chr1:91487774..91487802,-!p2@ZNF644!1.27!45.59!ZNF644;;chr1:45805693..45805718,+!p3@TOE1!1.27!37.34!TOE1;;chr14:64970670..64970712,-!p3@ZBTB25!1.27!37.34!ZBTB25;;chr17:45810594..45810608,+!p1@TBX21!1.26!17.29!TBX21;;chr2:231090471..231090504,+!p2@SP140!1.26!17.29!SP140;;chr18:77155922..77155939,+!p1@NFATC1!1.23!43.23!NFATC1;;chr14:99738059..99738086,-!p2@BCL11B!1.23!16.11!BCL11B;;chr4:103498623..103498650,+!p9@NFKB1!1.23!16.11!NFKB1;;chr10:3827389..3827408,-!p1@KLF6!1.22!1177.85!KLF6;;chr13:74707894..74707947,-!p6@KLF12!1.22!17.29!KLF12;;chr2:192015677..192015691,-!p3@STAT4!1.21!15.33!STAT4;;chr3:18487057..18487105,-!p4@SATB1!1.21!15.33!SATB1;;chr13:41240717..41240735,-!p2@FOXO1!1.20!99.43!FOXO1;;chr3:39195037..39195069,-!p2@CSRNP1!1.20!90.39!CSRNP1;;chr21:36421535..36421610,-!p2@RUNX1!1.20!52.27!RUNX1;;chr14:35874077..35874091,-!p8@NFKBIA!1.20!14.93!NFKBIA;;chr14:75988831..75988847,+!p2@BATF!1.20!14.93!BATF;;chr4:38665769..38665801,+!p2@KLF3!1.19!128.51!KLF3;;chr2:97202991..97203043,+!p3@ARID5A!1.19!14.54!ARID5A;;chr14:75747250..75747267,+!p5@FOS!1.19!14.54!FOS;;chr20:56195474..56195506,-!p1@ZBP1!1.19!14.54!ZBP1;;chr10:104154246..104154347,+!p3@NFKB2!1.17!83.32!NFKB2;;chr6:143266297..143266356,-!p1@HIVEP2!1.17!66.42!HIVEP2;;chr10:3827371..3827386,-!p2@KLF6!1.16!111.62!KLF6;;chr2:208394817..208394834,+!p3@CREB1!1.16!53.45!CREB1;;chr9:102584278..102584285,+!p5@NR4A3!1.16!13.36!NR4A3;;chr14:75747296..75747329,+!p4@FOS!1.16!13.36!FOS;;chr17:37934365..37934387,-!p2@IKZF3!1.16!13.36!IKZF3;;chr11:67007611..67007622,+!p6@KDM2A!1.15!17.69!KDM2A;;chr2:157186630..157186686,-!p6@NR4A2!1.15!12.97!NR4A2;;chr6:106546834..106546850,+!p4@PRDM1!1.15!12.97!PRDM1;;chr2:61108695..61108753,+!p1@REL!1.14!88.43!REL;;chr10:35416142..35416169,+!p3@CREM!1.14!33.80!CREM;;chr11:67007522..67007533,+!p5@KDM2A!1.14!22.01!KDM2A;;chr7:106809470..106809481,+!p2@HBP1!1.14!18.08!HBP1;;chr11:128392273..128392308,-!p2@ETS1!1.13!53.45!ETS1;;chr3:5020939..5020952,+!p2@BHLHE40!1.13!38.91!BHLHE40;;chr14:35872926..35872951,-!p4@NFKBIA!1.13!17.69!NFKBIA;;chr10:3819310..3819325,-!p5@KLF6!1.13!16.51!KLF6;;chr16:79634595..79634620,-!p2@MAF!1.12!22.40!MAF;;chr20:51589835..51589848,+!p5@TSHZ2!1.12!12.18!TSHZ2;;chr19:45972203..45972226,+!p5@FOSB!1.11!11.79!FOSB;;chr19:45977697..45977713,+!p4@FOSB!1.11!11.79!FOSB;;chr7:50344289..50344323,+!p1@IKZF1!1.11!11.79!IKZF1;;chr15:31619326..31619390,+!p2@KLF13!1.10!134.80!KLF13;;chr1:59249645..59249656,-!p4@JUN!1.10!29.08!JUN;;chr3:39195139..39195150,-!p3@CSRNP1!1.10!14.93!CSRNP1;;chr3:71007344..71007348,-!p6@FOXP1!1.09!45.98!FOXP1;;chr8:81398444..81398472,+!p1@ZBTB10!1.09!45.59!ZBTB10;;chr6:157098579..157098634,+!p4@ARID1B!1.09!25.55!ARID1B;;chr5:142782823..142782854,-!p3@NR3C1!1.09!16.11!NR3C1;;chr19:45972701..45972774,+!p2@FOSB!1.09!15.33!FOSB;;chr7:50344251..50344288,+!p3@IKZF1!1.09!11.40!IKZF1;;chr4:109086281..109086319,-!p9@LEF1!1.09!11.40!LEF1;;chr4:149365827..149365870,-!p5@NR3C2!1.09!11.40!NR3C2;;chr14:99737850..99737852,-!p3@BCL11B!1.09!11.40!BCL11B;;chr17:56565257..56565283,-!p2@HSF5!1.09!11.40!HSF5;;chr19:18392422..18392440,-!p1@JUND!1.08!1518.59!JUND;;chrX:106960249..106960260,-!p5@TSC22D3!1.08!17.69!TSC22D3;;chr19:54041603..54041615,+!p10@ZNF331!1.08!11.00!ZNF331;;chr14:35872542..35872553,-!p10@NFKBIA!1.08!11.00!NFKBIA;;chr1:59249732..59249749,-!p2@JUN!1.07!129.69!JUN;;chr14:35872962..35873025,-!p3@NFKBIA!1.07!27.12!NFKBIA;;chr19:16435523..16435619,+!p2@KLF2!1.07!14.93!KLF2;;chr2:113057415..113057477,+!p3@ZC3H6!1.07!14.15!ZC3H6;;chr11:128392085..128392232,-!p1@ETS1!1.06!350.57!ETS1;;chr11:67007477..67007493,+!p2@KDM2A!1.06!89.21!KDM2A;;chr16:79634624..79634642,-!p1@MAF!1.06!42.05!MAF;;chr1:10754477..10754517,-!p1@CASZ1!1.06!17.69!CASZ1;;chr14:75988771..75988826,+!p1@BATF!1.06!14.15!BATF;;chr8:81397876..81397898,+!p5@ZBTB10!1.06!12.58!ZBTB10;;chr8:41909982..41910009,-!p2@KAT6A!1.06!11.79!KAT6A;;chr4:103498478..103498489,+!p12@NFKB1!1.06!10.61!NFKB1;;chr4:87927888..87927912,+!p18@AFF1!1.06!10.61!AFF1;;chr12:51158359..51158395,+!p4@ATF1!1.06!10.61!ATF1;;chr9:73028332..73028385,-!p3@KLF9!1.05!35.76!KLF9;;chr12:72056773..72056796,+!p3@THAP2!1.05!13.36!THAP2;;chr13:41593425..41593480,-!p1@ELF1!1.04!64.45!ELF1;;chr7:21467674..21467727,+!p1@SP4!1.04!40.09!SP4;;chr19:12721790..12721810,+!p2@ZNF791!1.04!27.90!ZNF791;;chr7:21467642..21467671,+!p2@SP4!1.04!23.19!SP4;;chr5:172483347..172483407,+!p1@C5orf41!1.03!73.49!CREBRF;;chr2:61108650..61108687,+!p2@REL!1.03!48.73!REL;;chr1:91487836..91487854,-!p3@ZNF644!1.03!22.40!ZNF644;;chr14:35872494..35872511,-!p5@NFKBIA!1.03!12.97!NFKBIA;;chr7:127032330..127032356,-!p3@ZNF800!1.03!12.58!ZNF800;;chr10:135121763..135121783,+!p5@ZNF511!1.03!9.83!ZNF511;;chr14:75746781..75746799,+!p6@FOS!1.03!9.83!FOS;;chr10:3827417..3827428,-!p3@KLF6!1.02!82.93!KLF6;;chr20:56195525..56195556,-!p2@ZBP1!1.02!9.43!ZBP1;;chr4:109088130..109088163,-!p13@LEF1!1.02!9.43!LEF1;;chrX:49121165..49121179,-!p1@FOXP3!1.02!9.43!FOXP3;;chr8:103668114..103668134,-!p5@KLF10!1.02!9.43!KLF10;;chr8:123793252..123793266,+!p10@ZHX2!1.02!9.43!ZHX2;;chr1:37940170..37940190,+!p1@ZC3H12A!1.01!117.12!ZC3H12A;;chr19:18391593..18391611,-!p6@JUND!1.01!15.33!JUND;;chr19:18391708..18391737,-!p7@JUND!1.01!14.15!JUND;;chr13:74708246..74708264,-!p8@KLF12!1.01!10.22!KLF12;;chr3:63898321..63898396,+!p3@ATXN7!1.00!21.22!ATXN7;;chr8:102218439..102218455,-!p3@ZNF706!1.00!9.04!ZNF706;;chr13:41240737..41240787,-!p1@FOXO1!0.99!106.51!FOXO1;;chr16:3313791..3313834,+!p2@ZNF263!0.99!20.04!ZNF263;;chr9:102584159..102584174,+!p2@NR4A3!0.99!16.11!NR4A3;;chr14:64971461..64971542,+!p1@ZBTB1!0.98!177.25!ZBTB1;;chr11:13299319..13299424,+!p1@ARNTL!0.98!88.43!ARNTL;;chr19:19779619..19779670,+!p1@ZNF101!0.98!24.76!ZNF101;;chr11:85375237..85375277,-!p4@CREBZF!0.98!9.83!CREBZF;;chr10:3824206..3824226,-!p10@KLF6!0.98!8.65!KLF6;;chr5:142814241..142814278,-!p12@NR3C1!0.98!8.65!NR3C1;;chr3:71179699..71179744,-!p2@FOXP1!0.97!63.67!FOXP1;;chr9:114287433..114287513,+!p1@ZNF483!0.97!22.40!ZNF483;;chr3:33482052..3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|expression_enrichment_score=chr19:45971246..45971265,+!p1@FOSB!2.07!2043.66!FOSB;;chr1:25256756..25256774,-!p1@RUNX3!2.06!205.94!RUNX3;;chr2:157189180..157189290,-!p1@NR4A2!1.97!461.00!NR4A2;;chr10:8096631..8096660,+!p1@GATA3!1.97!109.65!GATA3;;chr14:75746722..75746777,+!p2@FOS!1.93!107.68!FOS;;chr3:63953435..63953499,+!p1@ATXN7!1.93!84.89!ATXN7;;chr5:133451294..133451310,+!p2@TCF7!1.92!82.53!TCF7;;chr7:50343634..50343717,+!p2@IKZF1!1.87!73.10!IKZF1;;chr5:133450365..133450444,+!p1@TCF7!1.86!307.33!TCF7;;chr19:54058073..54058088,+!p1@ZNF331!1.86!70.74!ZNF331;;chr2:192015701..192015743,-!p1@STAT4!1.83!90.00!STAT4;;chr10:8096772..8096787,+!p2@GATA3!1.83!78.21!GATA3;;chr15:60884706..60884743,-!p1@RORA!1.81!311.66!RORA;;chr14:75745523..75745537,+!p1@FOS!1.80!6940.57!FOS;;chr9:102584262..102584276,+!p1@NR4A3!1.79!131.27!NR4A3;;chr20:50159198..50159299,-!p1@NFATC2!1.76!82.14!NFATC2;;chr6:91006518..91006570,-!p1@BACH2!1.75!124.19!BACH2;;chrX:106960285..106960299,-!p1@TSC22D3!1.74!1359.42!TSC22D3;;chr19:54041669..54041697,+!p2@ZNF331!1.72!51.09!ZNF331;;chr9:3525727..3525828,-!p2@RFX3!1.69!117.51!RFX3;;chr2:231090433..231090469,+!p1@SP140!1.67!45.59!SP140;;chrY:21906594..21906622,-!p1@KDM5D!1.61!39.30!KDM5D;;chr3:71355163..71355209,-!p5@FOXP1!1.60!52.66!FOXP1;;chr19:16435625..16435682,+!p1@KLF2!1.58!1123.22!KLF2;;chr3:39195075..39195088,-!p1@CSRNP1!1.58!219.69!CSRNP1;;chr19:19729477..19729542,-!p1@PBX4!1.54!70.35!PBX4;;chr3:18486354..18486377,-!p2@SATB1!1.54!42.05!SATB1;;chr17:38020392..38020477,-!p1@IKZF3!1.54!33.80!IKZF3;;chr19:16435423..16435484,+!p5@KLF2!1.54!33.41!KLF2;;chr10:3824332..3824425,-!p4@KLF6!1.53!52.27!KLF6;;chr4:109087445..109087463,-!p1@LEF1!1.52!31.83!LEF1;;chr9:102584241..102584261,+!p4@NR4A3!1.50!46.77!NR4A3;;chrX:106960180..106960197,-!p2@TSC22D3!1.49!109.65!TSC22D3;;chr10:35484053..35484076,+!p1@CREM!1.48!71.53!CREM;;chr6:106546808..106546833,+!p3@PRDM1!1.48!36.55!PRDM1;;chr2:192015750..192015793,-!p2@STAT4!1.46!37.34!STAT4;;chr19:12902289..12902307,+!p1@JUNB!1.45!5871.97!JUNB;;chr1:59249688..59249703,-!p3@JUN!1.45!157.99!JUN;;chr7:50343895..50343936,+!p5@IKZF1!1.44!26.72!IKZF1;;chr3:71542615..71542644,-!p12@FOXP1!1.43!25.94!FOXP1;;chr9:117150254..117150271,-!p1@AKNA!1.42!67.99!AKNA;;chr6:391743..391759,+!p1@IRF4!1.42!25.15!IRF4;;chr7:104654718..104654741,+!p3@MLL5!1.41!35.76!MLL5;;chr12:72056800..72056834,+!p1@THAP2!1.41!33.41!THAP2;;chr8:123793988..123794016,+!p1@ZHX2!1.40!41.66!ZHX2;;chr2:157189617..157189667,-!p4@NR4A2!1.40!24.37!NR4A2;;chr9:102584128..102584144,+!p3@NR4A3!1.39!44.02!NR4A3;;chr14:35873947..35873965,-!p1@NFKBIA!1.38!1382.61!NFKBIA;;chr3:71542684..71542720,-!p18@FOXP1!1.38!23.19!FOXP1;;chr5:131826457..131826514,-!p1@IRF1!1.37!843.40!IRF1;;chr11:67007548..67007610,+!p3@KDM2A!1.37!161.53!KDM2A;;chr6:12009042..12009092,+!p6@HIVEP1!1.37!28.69!HIVEP1;;chr4:109090075..109090095,-!p2@LEF1!1.37!22.40!LEF1;;chr14:99738138..99738163,-!p1@BCL11B!1.37!22.40!BCL11B;;chr3:23986824..23986848,+!p2@NR1D2!1.36!119.08!NR1D2;;chr14:64971288..64971316,-!p2@ZBTB25!1.36!66.03!ZBTB25;;chr6:91006575..91006602,-!p2@BACH2!1.36!32.23!BACH2;;chr8:81397846..81397860,+!p3@ZBTB10!1.36!27.12!ZBTB10;;chr17:38497662..38497713,+!p4@RARA!1.36!25.15!RARA;;chr4:103422499..103422632,+!p1@NFKB1!1.35!429.56!NFKB1;;chrX:106960221..106960236,-!p3@TSC22D3!1.35!58.56!TSC22D3;;chr14:35872453..35872485,-!p2@NFKBIA!1.35!51.48!NFKBIA;;chr2:43453734..43453751,-!p1@ZFP36L2!1.34!2125.40!ZFP36L2;;chr15:60884747..60884774,-!p3@RORA!1.34!50.31!RORA;;chr2:97202480..97202499,+!p1@ARID5A!1.33!200.44!ARID5A;;chr19:54041645..54041661,+!p5@ZNF331!1.33!20.44!ZNF331;;chr20:51588873..51588953,+!p1@TSHZ2!1.32!26.33!TSHZ2;;chr3:71542651..71542683,-!p22@FOXP1!1.31!19.26!FOXP1;;chr1:59249707..59249727,-!p1@JUN!1.30!767.94!JUN;;chr7:104654690..104654704,+!p2@MLL5!1.30!36.94!MLL5;;chr8:81397820..81397836,+!p2@ZBTB10!1.29!23.19!ZBTB10;;chr5:133451347..133451358,+!p3@TCF7!1.29!18.47!TCF7;;chr18:46475696..46475713,-!p1@SMAD7!1.28!20.44!SMAD7;;chr7:17338324..17338341,+!p3@AHR!1.27!57.77!AHR;;chr1:91487774..91487802,-!p2@ZNF644!1.27!45.59!ZNF644;;chr1:45805693..45805718,+!p3@TOE1!1.27!37.34!TOE1;;chr14:64970670..64970712,-!p3@ZBTB25!1.27!37.34!ZBTB25;;chr17:45810594..45810608,+!p1@TBX21!1.26!17.29!TBX21;;chr2:231090471..231090504,+!p2@SP140!1.26!17.29!SP140;;chr18:77155922..77155939,+!p1@NFATC1!1.23!43.23!NFATC1;;chr14:99738059..99738086,-!p2@BCL11B!1.23!16.11!BCL11B;;chr4:103498623..103498650,+!p9@NFKB1!1.23!16.11!NFKB1;;chr10:3827389..3827408,-!p1@KLF6!1.22!1177.85!KLF6;;chr13:74707894..74707947,-!p6@KLF12!1.22!17.29!KLF12;;chr2:192015677..192015691,-!p3@STAT4!1.21!15.33!STAT4;;chr3:18487057..18487105,-!p4@SATB1!1.21!15.33!SATB1;;chr13:41240717..41240735,-!p2@FOXO1!1.20!99.43!FOXO1;;chr3:39195037..39195069,-!p2@CSRNP1!1.20!90.39!CSRNP1;;chr21:36421535..36421610,-!p2@RUNX1!1.20!52.27!RUNX1;;chr14:35874077..35874091,-!p8@NFKBIA!1.20!14.93!NFKBIA;;chr14:75988831..75988847,+!p2@BATF!1.20!14.93!BATF;;chr4:38665769..38665801,+!p2@KLF3!1.19!128.51!KLF3;;chr2:97202991..97203043,+!p3@ARID5A!1.19!14.54!ARID5A;;chr14:75747250..75747267,+!p5@FOS!1.19!14.54!FOS;;chr20:56195474..56195506,-!p1@ZBP1!1.19!14.54!ZBP1;;chr10:104154246..104154347,+!p3@NFKB2!1.17!83.32!NFKB2;;chr6:143266297..143266356,-!p1@HIVEP2!1.17!66.42!HIVEP2;;chr10:3827371..3827386,-!p2@KLF6!1.16!111.62!KLF6;;chr2:208394817..208394834,+!p3@CREB1!1.16!53.45!CREB1;;chr9:102584278..102584285,+!p5@NR4A3!1.16!13.36!NR4A3;;chr14:75747296..75747329,+!p4@FOS!1.16!13.36!FOS;;chr17:37934365..37934387,-!p2@IKZF3!1.16!13.36!IKZF3;;chr11:67007611..67007622,+!p6@KDM2A!1.15!17.69!KDM2A;;chr2:157186630..157186686,-!p6@NR4A2!1.15!12.97!NR4A2;;chr6:106546834..106546850,+!p4@PRDM1!1.15!12.97!PRDM1;;chr2:61108695..61108753,+!p1@REL!1.14!88.43!REL;;chr10:35416142..35416169,+!p3@CREM!1.14!33.80!CREM;;chr11:67007522..67007533,+!p5@KDM2A!1.14!22.01!KDM2A;;chr7:106809470..106809481,+!p2@HBP1!1.14!18.08!HBP1;;chr11:128392273..128392308,-!p2@ETS1!1.13!53.45!ETS1;;chr3:5020939..5020952,+!p2@BHLHE40!1.13!38.91!BHLHE40;;chr14:35872926..35872951,-!p4@NFKBIA!1.13!17.69!NFKBIA;;chr10:3819310..3819325,-!p5@KLF6!1.13!16.51!KLF6;;chr16:79634595..79634620,-!p2@MAF!1.12!22.40!MAF;;chr20:51589835..51589848,+!p5@TSHZ2!1.12!12.18!TSHZ2;;chr19:45972203..45972226,+!p5@FOSB!1.11!11.79!FOSB;;chr19:45977697..45977713,+!p4@FOSB!1.11!11.79!FOSB;;chr7:50344289..50344323,+!p1@IKZF1!1.11!11.79!IKZF1;;chr15:31619326..31619390,+!p2@KLF13!1.10!134.80!KLF13;;chr1:59249645..59249656,-!p4@JUN!1.10!29.08!JUN;;chr3:39195139..39195150,-!p3@CSRNP1!1.10!14.93!CSRNP1;;chr3:71007344..71007348,-!p6@FOXP1!1.09!45.98!FOXP1;;chr8:81398444..81398472,+!p1@ZBTB10!1.09!45.59!ZBTB10;;chr6:157098579..157098634,+!p4@ARID1B!1.09!25.55!ARID1B;;chr5:142782823..142782854,-!p3@NR3C1!1.09!16.11!NR3C1;;chr19:45972701..45972774,+!p2@FOSB!1.09!15.33!FOSB;;chr7:50344251..50344288,+!p3@IKZF1!1.09!11.40!IKZF1;;chr4:109086281..109086319,-!p9@LEF1!1.09!11.40!LEF1;;chr4:149365827..149365870,-!p5@NR3C2!1.09!11.40!NR3C2;;chr14:99737850..99737852,-!p3@BCL11B!1.09!11.40!BCL11B;;chr17:56565257..56565283,-!p2@HSF5!1.09!11.40!HSF5;;chr19:18392422..18392440,-!p1@JUND!1.08!1518.59!JUND;;chrX:106960249..106960260,-!p5@TSC22D3!1.08!17.69!TSC22D3;;chr19:54041603..54041615,+!p10@ZNF331!1.08!11.00!ZNF331;;chr14:35872542..35872553,-!p10@NFKBIA!1.08!11.00!NFKBIA;;chr1:59249732..59249749,-!p2@JUN!1.07!129.69!JUN;;chr14:35872962..35873025,-!p3@NFKBIA!1.07!27.12!NFKBIA;;chr19:16435523..16435619,+!p2@KLF2!1.07!14.93!KLF2;;chr2:113057415..113057477,+!p3@ZC3H6!1.07!14.15!ZC3H6;;chr11:128392085..128392232,-!p1@ETS1!1.06!350.57!ETS1;;chr11:67007477..67007493,+!p2@KDM2A!1.06!89.21!KDM2A;;chr16:79634624..79634642,-!p1@MAF!1.06!42.05!MAF;;chr1:10754477..10754517,-!p1@CASZ1!1.06!17.69!CASZ1;;chr14:75988771..75988826,+!p1@BATF!1.06!14.15!BATF;;chr8:81397876..81397898,+!p5@ZBTB10!1.06!12.58!ZBTB10;;chr8:41909982..41910009,-!p2@KAT6A!1.06!11.79!KAT6A;;chr4:103498478..103498489,+!p12@NFKB1!1.06!10.61!NFKB1;;chr4:87927888..87927912,+!p18@AFF1!1.06!10.61!AFF1;;chr12:51158359..51158395,+!p4@ATF1!1.06!10.61!ATF1;;chr9:73028332..73028385,-!p3@KLF9!1.05!35.76!KLF9;;chr12:72056773..72056796,+!p3@THAP2!1.05!13.36!THAP2;;chr13:41593425..41593480,-!p1@ELF1!1.04!64.45!ELF1;;chr7:21467674..21467727,+!p1@SP4!1.04!40.09!SP4;;chr19:12721790..12721810,+!p2@ZNF791!1.04!27.90!ZNF791;;chr7:21467642..21467671,+!p2@SP4!1.04!23.19!SP4;;chr5:172483347..172483407,+!p1@C5orf41!1.03!73.49!CREBRF;;chr2:61108650..61108687,+!p2@REL!1.03!48.73!REL;;chr1:91487836..91487854,-!p3@ZNF644!1.03!22.40!ZNF644;;chr14:35872494..35872511,-!p5@NFKBIA!1.03!12.97!NFKBIA;;chr7:127032330..127032356,-!p3@ZNF800!1.03!12.58!ZNF800;;chr10:135121763..135121783,+!p5@ZNF511!1.03!9.83!ZNF511;;chr14:75746781..75746799,+!p6@FOS!1.03!9.83!FOS;;chr10:3827417..3827428,-!p3@KLF6!1.02!82.93!KLF6;;chr20:56195525..56195556,-!p2@ZBP1!1.02!9.43!ZBP1;;chr4:109088130..109088163,-!p13@LEF1!1.02!9.43!LEF1;;chrX:49121165..49121179,-!p1@FOXP3!1.02!9.43!FOXP3;;chr8:103668114..103668134,-!p5@KLF10!1.02!9.43!KLF10;;chr8:123793252..123793266,+!p10@ZHX2!1.02!9.43!ZHX2;;chr1:37940170..37940190,+!p1@ZC3H12A!1.01!117.12!ZC3H12A;;chr19:18391593..18391611,-!p6@JUND!1.01!15.33!JUND;;chr19:18391708..18391737,-!p7@JUND!1.01!14.15!JUND;;chr13:74708246..74708264,-!p8@KLF12!1.01!10.22!KLF12;;chr3:63898321..63898396,+!p3@ATXN7!1.00!21.22!ATXN7;;chr8:102218439..102218455,-!p3@ZNF706!1.00!9.04!ZNF706;;chr13:41240737..41240787,-!p1@FOXO1!0.99!106.51!FOXO1;;chr16:3313791..3313834,+!p2@ZNF263!0.99!20.04!ZNF263;;chr9:102584159..102584174,+!p2@NR4A3!0.99!16.11!NR4A3;;chr14:64971461..64971542,+!p1@ZBTB1!0.98!177.25!ZBTB1;;chr11:13299319..13299424,+!p1@ARNTL!0.98!88.43!ARNTL;;chr19:19779619..19779670,+!p1@ZNF101!0.98!24.76!ZNF101;;chr11:85375237..85375277,-!p4@CREBZF!0.98!9.83!CREBZF;;chr10:3824206..3824226,-!p10@KLF6!0.98!8.65!KLF6;;chr5:142814241..142814278,-!p12@NR3C1!0.98!8.65!NR3C1;;chr3:71179699..71179744,-!p2@FOXP1!0.97!63.67!FOXP1;;chr9:114287433..114287513,+!p1@ZNF483!0.97!22.40!ZNF483;;chr3:33482052..3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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 35: Line 44:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor2.CNhs11955.11306-117C1.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor2.CNhs11955.11306-117C1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor2.CNhs11955.11306-117C1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor2.CNhs11955.11306-117C1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor2.CNhs11955.11306-117C1.hg38.nobarcode.ctss.bed.gz
|id=FF:11306-117C1
|id=FF:11306-117C1
|is_a=EFO:0002091;;FF:0000002;;FF:0000031;;FF:0000210
|is_a=EFO:0002091;;FF:0000031;;FF:0000210
|is_obsolete=
|library_id=CNhs11955
|library_id_phase_based=2:CNhs11955
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11306
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.CTTGTA.11306
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11306
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.CTTGTA.11306
|name=CD4+ T Cells, donor2
|name=CD4+ T Cells, donor2
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 65:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11955,LSID836,release011,COMPLETED
|profile_hcage=CNhs11955,LSID836,release011,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=SRhi10009,,,
|profile_srnaseq=SRhi10009,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=117
|rna_box=117
|rna_catalog_number=3H100-23-10
|rna_catalog_number=3H100-23-10
Line 56: Line 82:
|rna_tube_id=117C1
|rna_tube_id=117C1
|rna_weight_ug=10
|rna_weight_ug=10
|rnaseq_library_id=SRhi10009.CTTGTA
|sample_age=57
|sample_age=57
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_line=
Line 69: Line 97:
|sample_ethnicity=C
|sample_ethnicity=C
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.56655890480506e-226!GO:0043227;membrane-bound organelle;4.19754128443589e-197!GO:0043231;intracellular membrane-bound organelle;8.4163638208415e-197!GO:0043226;organelle;1.90364931063399e-185!GO:0043229;intracellular organelle;8.87175750879833e-185!GO:0005737;cytoplasm;4.62013765992835e-125!GO:0005634;nucleus;2.04307803396212e-118!GO:0044422;organelle part;1.16265341063597e-108!GO:0044446;intracellular organelle part;5.1586810354832e-107!GO:0043170;macromolecule metabolic process;1.08498454725077e-103!GO:0044237;cellular metabolic process;2.87903166454459e-99!GO:0044238;primary metabolic process;1.00231120013036e-95!GO:0032991;macromolecular complex;7.10867167923538e-86!GO:0044428;nuclear part;1.75900399343548e-82!GO:0043283;biopolymer metabolic process;1.0077224865301e-79!GO:0003723;RNA binding;3.02871467308312e-78!GO:0044444;cytoplasmic part;1.82901600682151e-76!GO:0030529;ribonucleoprotein complex;6.05544579787711e-76!GO:0010467;gene expression;1.21327466718895e-66!GO:0043233;organelle lumen;2.51484115282339e-66!GO:0031974;membrane-enclosed lumen;2.51484115282339e-66!GO:0005515;protein binding;1.72437450689368e-63!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.30052207130132e-62!GO:0031981;nuclear lumen;3.16924161133116e-53!GO:0006396;RNA processing;6.32380631170484e-52!GO:0003676;nucleic acid binding;6.47167024656748e-48!GO:0019538;protein metabolic process;7.84825986454192e-48!GO:0044267;cellular protein metabolic process;1.00993690206965e-46!GO:0016071;mRNA metabolic process;2.43692023553033e-46!GO:0033036;macromolecule localization;8.70173109915485e-46!GO:0044260;cellular macromolecule metabolic process;1.04954936851547e-45!GO:0006412;translation;8.5391223707675e-45!GO:0015031;protein transport;3.24530704776346e-44!GO:0043234;protein complex;2.55372235291458e-42!GO:0045184;establishment of protein localization;7.81886921054562e-42!GO:0008104;protein localization;2.17880843622464e-41!GO:0016070;RNA metabolic process;2.23072124598219e-40!GO:0008380;RNA splicing;9.66129797220231e-40!GO:0005739;mitochondrion;2.8336413908966e-39!GO:0005840;ribosome;9.18086691868897e-39!GO:0006397;mRNA processing;1.88330085473181e-38!GO:0005654;nucleoplasm;8.73865163815352e-34!GO:0003735;structural constituent of ribosome;2.65310214176622e-33!GO:0046907;intracellular transport;3.17179809827127e-33!GO:0006259;DNA metabolic process;1.22201083074691e-32!GO:0031090;organelle membrane;1.38973019114004e-32!GO:0009059;macromolecule biosynthetic process;2.73819695756017e-32!GO:0006886;intracellular protein transport;4.41471124066701e-32!GO:0031967;organelle envelope;8.92079678728525e-32!GO:0016043;cellular component organization and biogenesis;1.18925675790961e-31!GO:0031975;envelope;1.77682202000592e-31!GO:0033279;ribosomal subunit;3.66523474554783e-31!GO:0005681;spliceosome;8.93410418075476e-30!GO:0005829;cytosol;1.43541192529731e-29!GO:0044429;mitochondrial part;2.74793679332554e-29!GO:0006512;ubiquitin cycle;1.52515827997659e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.4480106702505e-28!GO:0000166;nucleotide binding;1.36061193706483e-27!GO:0044451;nucleoplasm part;1.64482141100669e-27!GO:0065003;macromolecular complex assembly;4.38448096683603e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.47790123325678e-26!GO:0006996;organelle organization and biogenesis;1.35488361004631e-25!GO:0022607;cellular component assembly;1.59045806507912e-24!GO:0044445;cytosolic part;5.76781223412099e-24!GO:0043412;biopolymer modification;7.57082101791657e-24!GO:0044249;cellular biosynthetic process;2.02176419516871e-23!GO:0009058;biosynthetic process;3.14429584812969e-23!GO:0051641;cellular localization;4.56768603314327e-23!GO:0051649;establishment of cellular localization;8.30820135916594e-23!GO:0012501;programmed cell death;2.52983836404958e-22!GO:0006915;apoptosis;3.06614635330985e-22!GO:0008219;cell death;1.40187431072051e-21!GO:0016265;death;1.40187431072051e-21!GO:0006464;protein modification process;4.68606809330398e-21!GO:0008134;transcription factor binding;4.97051123741141e-21!GO:0043687;post-translational protein modification;5.74087953733366e-21!GO:0050794;regulation of cellular process;7.15390827527612e-21!GO:0019941;modification-dependent protein catabolic process;2.2097779880092e-20!GO:0043632;modification-dependent macromolecule catabolic process;2.2097779880092e-20!GO:0051603;proteolysis involved in cellular protein catabolic process;2.36211001329569e-20!GO:0006511;ubiquitin-dependent protein catabolic process;2.47776111777471e-20!GO:0044265;cellular macromolecule catabolic process;2.87819676131091e-20!GO:0044257;cellular protein catabolic process;7.28764407946165e-20!GO:0006605;protein targeting;9.01688166514988e-20!GO:0032553;ribonucleotide binding;9.18764158813341e-20!GO:0032555;purine ribonucleotide binding;9.18764158813341e-20!GO:0005740;mitochondrial envelope;1.48478973559247e-19!GO:0016874;ligase activity;1.68057844703647e-19!GO:0017111;nucleoside-triphosphatase activity;2.18606584366897e-19!GO:0005730;nucleolus;2.29479270333229e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.81783157060986e-19!GO:0031966;mitochondrial membrane;2.84557108983695e-19!GO:0016462;pyrophosphatase activity;2.84557108983695e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;3.46146310202291e-19!GO:0006913;nucleocytoplasmic transport;3.53445854003477e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;5.7483575411881e-19!GO:0051169;nuclear transport;7.62067951447536e-19!GO:0043228;non-membrane-bound organelle;8.06985756194862e-19!GO:0043232;intracellular non-membrane-bound organelle;8.06985756194862e-19!GO:0051276;chromosome organization and biogenesis;1.39465505916514e-18!GO:0017076;purine nucleotide binding;1.44984765514624e-18!GO:0016604;nuclear body;2.3596849862294e-18!GO:0006323;DNA packaging;4.11594853988703e-18!GO:0019866;organelle inner membrane;5.14824896425153e-18!GO:0043285;biopolymer catabolic process;9.85113938628403e-18!GO:0022618;protein-RNA complex assembly;1.03337572175175e-17!GO:0019222;regulation of metabolic process;4.40379108838494e-17!GO:0007049;cell cycle;4.71778706563159e-17!GO:0005524;ATP binding;5.87811883638409e-17!GO:0032559;adenyl ribonucleotide binding;2.05702572953745e-16!GO:0006119;oxidative phosphorylation;2.28995441166498e-16!GO:0015934;large ribosomal subunit;2.62366497137137e-16!GO:0008135;translation factor activity, nucleic acid binding;4.27882591371837e-16!GO:0005743;mitochondrial inner membrane;7.05702568000057e-16!GO:0015935;small ribosomal subunit;7.18910934587608e-16!GO:0042981;regulation of apoptosis;1.29303331903562e-15!GO:0016607;nuclear speck;1.67660493323687e-15!GO:0043067;regulation of programmed cell death;1.90971467944696e-15!GO:0009057;macromolecule catabolic process;3.79292285402181e-15!GO:0030554;adenyl nucleotide binding;4.64279545921757e-15!GO:0006974;response to DNA damage stimulus;5.51180140887626e-15!GO:0050789;regulation of biological process;1.19446370925006e-14!GO:0031323;regulation of cellular metabolic process;1.38393946754156e-14!GO:0016887;ATPase activity;2.46647153197434e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.10132760446858e-14!GO:0030163;protein catabolic process;3.40055711649244e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.57154217671611e-14!GO:0044455;mitochondrial membrane part;5.01318473713721e-14!GO:0017038;protein import;7.9325126102075e-14!GO:0006350;transcription;8.18883860057106e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;9.99387861050128e-14!GO:0000375;RNA splicing, via transesterification reactions;9.99387861050128e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.99387861050128e-14!GO:0042623;ATPase activity, coupled;1.06738989597144e-13!GO:0016568;chromatin modification;1.14588315691752e-13!GO:0005635;nuclear envelope;2.80780770557451e-13!GO:0004386;helicase activity;3.53571531336881e-13!GO:0003712;transcription cofactor activity;6.16958157497022e-13!GO:0031965;nuclear membrane;9.91983152018367e-13!GO:0010468;regulation of gene expression;1.57077666861225e-12!GO:0012505;endomembrane system;1.58657611839431e-12!GO:0006281;DNA repair;2.2912611744037e-12!GO:0008639;small protein conjugating enzyme activity;2.65052154879668e-12!GO:0031980;mitochondrial lumen;2.70458808565471e-12!GO:0005759;mitochondrial matrix;2.70458808565471e-12!GO:0005694;chromosome;2.88908368787956e-12!GO:0044453;nuclear membrane part;2.96778649918343e-12!GO:0004842;ubiquitin-protein ligase activity;3.88228338923256e-12!GO:0006457;protein folding;4.06709930077996e-12!GO:0005746;mitochondrial respiratory chain;6.81290316760801e-12!GO:0022402;cell cycle process;7.23745795146283e-12!GO:0006333;chromatin assembly or disassembly;7.53468315630318e-12!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.92370024965279e-12!GO:0006366;transcription from RNA polymerase II promoter;8.18001338163544e-12!GO:0065004;protein-DNA complex assembly;9.36418698748247e-12!GO:0051726;regulation of cell cycle;1.08445162808822e-11!GO:0006793;phosphorus metabolic process;1.13519790181563e-11!GO:0006796;phosphate metabolic process;1.13519790181563e-11!GO:0000502;proteasome complex (sensu Eukaryota);1.26414516548373e-11!GO:0003743;translation initiation factor activity;1.40259866367911e-11!GO:0000074;regulation of progression through cell cycle;2.01659114974175e-11!GO:0044248;cellular catabolic process;2.01659114974175e-11!GO:0019787;small conjugating protein ligase activity;2.08725926422429e-11!GO:0006413;translational initiation;2.22626263896526e-11!GO:0050657;nucleic acid transport;2.58206005759858e-11!GO:0051236;establishment of RNA localization;2.58206005759858e-11!GO:0050658;RNA transport;2.58206005759858e-11!GO:0006403;RNA localization;3.01563725160834e-11!GO:0048523;negative regulation of cellular process;3.35539591712092e-11!GO:0008026;ATP-dependent helicase activity;3.6087754007372e-11!GO:0005643;nuclear pore;5.16899630450534e-11!GO:0006606;protein import into nucleus;6.4799260976235e-11!GO:0032774;RNA biosynthetic process;6.6717753416565e-11!GO:0050136;NADH dehydrogenase (quinone) activity;6.6717753416565e-11!GO:0003954;NADH dehydrogenase activity;6.6717753416565e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.6717753416565e-11!GO:0051170;nuclear import;6.71023377686812e-11!GO:0006446;regulation of translational initiation;6.846926978517e-11!GO:0006351;transcription, DNA-dependent;7.07718318651452e-11!GO:0044427;chromosomal part;1.67760033986409e-10!GO:0045449;regulation of transcription;2.3489934214752e-10!GO:0016310;phosphorylation;4.62268364520588e-10!GO:0008270;zinc ion binding;6.57484992629386e-10!GO:0042254;ribosome biogenesis and assembly;7.22391729980758e-10!GO:0051082;unfolded protein binding;7.91891515498646e-10!GO:0007243;protein kinase cascade;1.06167917473447e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.08388074352273e-09!GO:0048770;pigment granule;1.16746404055404e-09!GO:0042470;melanosome;1.16746404055404e-09!GO:0065007;biological regulation;1.18182564706397e-09!GO:0000785;chromatin;1.28227925975217e-09!GO:0048519;negative regulation of biological process;1.31740882674594e-09!GO:0042775;organelle ATP synthesis coupled electron transport;1.46711739597683e-09!GO:0042773;ATP synthesis coupled electron transport;1.46711739597683e-09!GO:0048193;Golgi vesicle transport;2.05440578399538e-09!GO:0051028;mRNA transport;2.11170304228091e-09!GO:0030964;NADH dehydrogenase complex (quinone);2.90003628057585e-09!GO:0045271;respiratory chain complex I;2.90003628057585e-09!GO:0005747;mitochondrial respiratory chain complex I;2.90003628057585e-09!GO:0009719;response to endogenous stimulus;2.99962402229444e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.76255464156114e-09!GO:0005794;Golgi apparatus;3.85894145913571e-09!GO:0016881;acid-amino acid ligase activity;5.57199294460089e-09!GO:0043566;structure-specific DNA binding;5.8739855913283e-09!GO:0046930;pore complex;6.6258515167225e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.96011832327427e-09!GO:0006355;regulation of transcription, DNA-dependent;7.40309552272216e-09!GO:0016563;transcription activator activity;7.6033145527052e-09!GO:0003713;transcription coactivator activity;7.77666203177584e-09!GO:0031324;negative regulation of cellular metabolic process;7.85200275306487e-09!GO:0065002;intracellular protein transport across a membrane;1.51316079005132e-08!GO:0016564;transcription repressor activity;1.65889129712311e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.65889129712311e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.87074018244646e-08!GO:0003697;single-stranded DNA binding;2.04929844782007e-08!GO:0032446;protein modification by small protein conjugation;2.45708540713472e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.78009182888207e-08!GO:0019829;cation-transporting ATPase activity;3.08201332159198e-08!GO:0045786;negative regulation of progression through cell cycle;3.14268918547716e-08!GO:0043069;negative regulation of programmed cell death;3.25620635197809e-08!GO:0008565;protein transporter activity;4.3271870784661e-08!GO:0043066;negative regulation of apoptosis;5.16574817793732e-08!GO:0016567;protein ubiquitination;5.3248201915607e-08!GO:0005768;endosome;5.76289145622357e-08!GO:0016192;vesicle-mediated transport;5.85509243498508e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.36956533554578e-08!GO:0006916;anti-apoptosis;6.48087548360513e-08!GO:0051246;regulation of protein metabolic process;8.54898324686138e-08!GO:0031497;chromatin assembly;9.93013927187105e-08!GO:0006334;nucleosome assembly;1.03215000548844e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.09627543507564e-07!GO:0007242;intracellular signaling cascade;1.16008617445953e-07!GO:0003677;DNA binding;1.28369433891743e-07!GO:0000151;ubiquitin ligase complex;1.28642235812739e-07!GO:0065009;regulation of a molecular function;1.31705604793391e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.44022595966295e-07!GO:0009892;negative regulation of metabolic process;1.67278177386526e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.79208388253736e-07!GO:0030532;small nuclear ribonucleoprotein complex;2.05241311396722e-07!GO:0019899;enzyme binding;2.1790511930817e-07!GO:0016072;rRNA metabolic process;2.55165723851782e-07!GO:0004674;protein serine/threonine kinase activity;3.18302485076877e-07!GO:0016481;negative regulation of transcription;3.22340443114404e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.365976809482e-07!GO:0006364;rRNA processing;3.54142890889041e-07!GO:0006399;tRNA metabolic process;3.55831146650705e-07!GO:0051168;nuclear export;3.72558793600103e-07!GO:0005761;mitochondrial ribosome;3.80294553522795e-07!GO:0000313;organellar ribosome;3.80294553522795e-07!GO:0051186;cofactor metabolic process;4.72682285801344e-07!GO:0016740;transferase activity;5.17455739190972e-07!GO:0016787;hydrolase activity;5.48256809909053e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.89234663571476e-07!GO:0043065;positive regulation of apoptosis;6.2651638649944e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.30442807031625e-07!GO:0009260;ribonucleotide biosynthetic process;8.51995628722294e-07!GO:0009259;ribonucleotide metabolic process;8.55356699505128e-07!GO:0043068;positive regulation of programmed cell death;9.19881367290869e-07!GO:0006917;induction of apoptosis;9.70191398448434e-07!GO:0044432;endoplasmic reticulum part;1.12629518580258e-06!GO:0046914;transition metal ion binding;1.23983284760971e-06!GO:0000278;mitotic cell cycle;1.27086680681594e-06!GO:0012502;induction of programmed cell death;1.55790598498267e-06!GO:0006260;DNA replication;1.86278817852675e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.15096902669313e-06!GO:0003724;RNA helicase activity;2.212185356384e-06!GO:0009152;purine ribonucleotide biosynthetic process;2.27461906951549e-06!GO:0015986;ATP synthesis coupled proton transport;2.4129433374843e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.4129433374843e-06!GO:0006164;purine nucleotide biosynthetic process;2.75351663507535e-06!GO:0009060;aerobic respiration;3.90115821032281e-06!GO:0005839;proteasome core complex (sensu Eukaryota);4.19650714446058e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.86141916274788e-06!GO:0006401;RNA catabolic process;5.06070071223975e-06!GO:0005783;endoplasmic reticulum;5.06070071223975e-06!GO:0009150;purine ribonucleotide metabolic process;6.22612267125669e-06!GO:0006402;mRNA catabolic process;6.52794522560568e-06!GO:0006163;purine nucleotide metabolic process;6.6618297096897e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.71422870238398e-06!GO:0000245;spliceosome assembly;7.23319765967646e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;7.26920961073216e-06!GO:0015399;primary active transmembrane transporter activity;7.26920961073216e-06!GO:0005789;endoplasmic reticulum membrane;1.04209826665967e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.06117365310042e-05!GO:0016363;nuclear matrix;1.09927772979133e-05!GO:0006754;ATP biosynthetic process;1.13649013337673e-05!GO:0006753;nucleoside phosphate metabolic process;1.13649013337673e-05!GO:0009142;nucleoside triphosphate biosynthetic process;1.28862085997134e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.28862085997134e-05!GO:0009056;catabolic process;1.33202496046517e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.38566541015378e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.38566541015378e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.38566541015378e-05!GO:0006732;coenzyme metabolic process;1.39228349739412e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.417895523124e-05!GO:0004298;threonine endopeptidase activity;1.52339763907858e-05!GO:0005813;centrosome;1.67121326694799e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.6800833782889e-05!GO:0045259;proton-transporting ATP synthase complex;1.78050673961354e-05!GO:0016779;nucleotidyltransferase activity;1.98446042737796e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.16195915834302e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.20908795690606e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.20908795690606e-05!GO:0008234;cysteine-type peptidase activity;3.13564072552715e-05!GO:0009199;ribonucleoside triphosphate metabolic process;3.136994441502e-05!GO:0003714;transcription corepressor activity;3.18030102207048e-05!GO:0043038;amino acid activation;3.39266441503982e-05!GO:0006418;tRNA aminoacylation for protein translation;3.39266441503982e-05!GO:0043039;tRNA aminoacylation;3.39266441503982e-05!GO:0048522;positive regulation of cellular process;3.90632350847961e-05!GO:0045333;cellular respiration;4.28296773451946e-05!GO:0046034;ATP metabolic process;4.30691576392745e-05!GO:0008186;RNA-dependent ATPase activity;4.42933213403963e-05!GO:0009141;nucleoside triphosphate metabolic process;4.42933213403963e-05!GO:0007005;mitochondrion organization and biogenesis;4.98326105773393e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.09337444551133e-05!GO:0009144;purine nucleoside triphosphate metabolic process;5.09337444551133e-05!GO:0005815;microtubule organizing center;5.25728586654536e-05!GO:0005793;ER-Golgi intermediate compartment;5.31116213979382e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.43981489929987e-05!GO:0003924;GTPase activity;5.88691986636957e-05!GO:0006417;regulation of translation;5.95021400325268e-05!GO:0005525;GTP binding;6.07720528218323e-05!GO:0051427;hormone receptor binding;6.20720431503183e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;7.53910585845637e-05!GO:0043492;ATPase activity, coupled to movement of substances;7.91486567418907e-05!GO:0007264;small GTPase mediated signal transduction;8.20249157929959e-05!GO:0048475;coated membrane;8.38671015340335e-05!GO:0030117;membrane coat;8.38671015340335e-05!GO:0006461;protein complex assembly;8.71645674863852e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;9.55433718832904e-05!GO:0003690;double-stranded DNA binding;0.000101643085139807!GO:0003729;mRNA binding;0.000104152497415955!GO:0006352;transcription initiation;0.000106099527063526!GO:0030120;vesicle coat;0.00011203774567284!GO:0030662;coated vesicle membrane;0.00011203774567284!GO:0051188;cofactor biosynthetic process;0.000113431179633776!GO:0060090;molecular adaptor activity;0.000115222031166474!GO:0035257;nuclear hormone receptor binding;0.000119476493895943!GO:0043623;cellular protein complex assembly;0.000121064104214317!GO:0004004;ATP-dependent RNA helicase activity;0.000136551359775041!GO:0005667;transcription factor complex;0.000144550281279596!GO:0006613;cotranslational protein targeting to membrane;0.000152603067737625!GO:0007265;Ras protein signal transduction;0.000154401023626628!GO:0031326;regulation of cellular biosynthetic process;0.000167014972751491!GO:0008632;apoptotic program;0.000172457549440931!GO:0019783;small conjugating protein-specific protease activity;0.000203719907299607!GO:0006099;tricarboxylic acid cycle;0.000221958969955438!GO:0046356;acetyl-CoA catabolic process;0.000221958969955438!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000228692761035493!GO:0005769;early endosome;0.000235590909272302!GO:0016251;general RNA polymerase II transcription factor activity;0.000238822285650943!GO:0044440;endosomal part;0.000241178072569505!GO:0010008;endosome membrane;0.000241178072569505!GO:0005770;late endosome;0.000269839590371291!GO:0006607;NLS-bearing substrate import into nucleus;0.000272528081028892!GO:0050790;regulation of catalytic activity;0.000275635962751466!GO:0022403;cell cycle phase;0.00028837503235227!GO:0042110;T cell activation;0.00029430533930001!GO:0004843;ubiquitin-specific protease activity;0.000302618115014542!GO:0015631;tubulin binding;0.000325192056353007!GO:0030384;phosphoinositide metabolic process;0.000342280851061556!GO:0045892;negative regulation of transcription, DNA-dependent;0.000346686148116354!GO:0006084;acetyl-CoA metabolic process;0.000404985576392735!GO:0005773;vacuole;0.000414144960676398!GO:0006261;DNA-dependent DNA replication;0.000463911045463384!GO:0046822;regulation of nucleocytoplasmic transport;0.000472821877144843!GO:0030695;GTPase regulator activity;0.000473077063031077!GO:0016197;endosome transport;0.000482983210806815!GO:0015630;microtubule cytoskeleton;0.000517650585872104!GO:0009055;electron carrier activity;0.000521551656584887!GO:0009108;coenzyme biosynthetic process;0.000543612775991935!GO:0044431;Golgi apparatus part;0.000569981567704871!GO:0051223;regulation of protein transport;0.000593321275415376!GO:0048471;perinuclear region of cytoplasm;0.000604891703529637!GO:0008017;microtubule binding;0.000633193908374068!GO:0006611;protein export from nucleus;0.000638072804039119!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000638072804039119!GO:0005083;small GTPase regulator activity;0.000713638318005442!GO:0006310;DNA recombination;0.000713638318005442!GO:0006752;group transfer coenzyme metabolic process;0.000713638318005442!GO:0008654;phospholipid biosynthetic process;0.000726303013529073!GO:0032561;guanyl ribonucleotide binding;0.000741759660614602!GO:0019001;guanyl nucleotide binding;0.000741759660614602!GO:0009889;regulation of biosynthetic process;0.000744186442193686!GO:0006891;intra-Golgi vesicle-mediated transport;0.000754242808130215!GO:0004221;ubiquitin thiolesterase activity;0.000760926136587362!GO:0006338;chromatin remodeling;0.000775669407870441!GO:0048518;positive regulation of biological process;0.000775669407870441!GO:0006612;protein targeting to membrane;0.000848832425504076!GO:0022415;viral reproductive process;0.000874762397823699!GO:0006405;RNA export from nucleus;0.000977515012018568!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00100780519429093!GO:0009966;regulation of signal transduction;0.00100780519429093!GO:0007050;cell cycle arrest;0.00101838951825949!GO:0000786;nucleosome;0.00104829959781894!GO:0016301;kinase activity;0.00105157106640457!GO:0000087;M phase of mitotic cell cycle;0.00109311241425131!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00110031334973955!GO:0009109;coenzyme catabolic process;0.00110713371590746!GO:0048468;cell development;0.00118070168560783!GO:0006414;translational elongation;0.00125163247380042!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00126664756310451!GO:0009967;positive regulation of signal transduction;0.00128367155643885!GO:0005885;Arp2/3 protein complex;0.00132687690025458!GO:0009615;response to virus;0.00135732955030113!GO:0007067;mitosis;0.00137474227660989!GO:0046966;thyroid hormone receptor binding;0.00142563913033665!GO:0051252;regulation of RNA metabolic process;0.0014311463512349!GO:0045941;positive regulation of transcription;0.00146124254473839!GO:0051251;positive regulation of lymphocyte activation;0.00156565281069935!GO:0043021;ribonucleoprotein binding;0.00158064582949306!GO:0006650;glycerophospholipid metabolic process;0.00163580428180459!GO:0046649;lymphocyte activation;0.00169027880719431!GO:0051301;cell division;0.00174478570394902!GO:0031625;ubiquitin protein ligase binding;0.00179110387370258!GO:0031072;heat shock protein binding;0.00179110387370258!GO:0003746;translation elongation factor activity;0.00187700877991632!GO:0000323;lytic vacuole;0.00189078393152812!GO:0005764;lysosome;0.00189078393152812!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00191434178882427!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0019234952025641!GO:0030518;steroid hormone receptor signaling pathway;0.00196621037135737!GO:0051187;cofactor catabolic process;0.00198411993411905!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00224162281670158!GO:0051090;regulation of transcription factor activity;0.00231368497042474!GO:0003682;chromatin binding;0.00250588738530023!GO:0005637;nuclear inner membrane;0.00250588738530023!GO:0042802;identical protein binding;0.00260112829906638!GO:0005684;U2-dependent spliceosome;0.00278939551528312!GO:0043488;regulation of mRNA stability;0.00278939551528312!GO:0043487;regulation of RNA stability;0.00278939551528312!GO:0008022;protein C-terminus binding;0.00278939551528312!GO:0051789;response to protein stimulus;0.00278939551528312!GO:0006986;response to unfolded protein;0.00278939551528312!GO:0003899;DNA-directed RNA polymerase activity;0.00279261483346678!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00279261483346678!GO:0046489;phosphoinositide biosynthetic process;0.00280321093830096!GO:0008168;methyltransferase activity;0.00285927774623494!GO:0016741;transferase activity, transferring one-carbon groups;0.0029316770108915!GO:0005741;mitochondrial outer membrane;0.00298626147833954!GO:0008139;nuclear localization sequence binding;0.00301638676148107!GO:0008047;enzyme activator activity;0.00303340138688541!GO:0005070;SH3/SH2 adaptor activity;0.00309975372670548!GO:0045893;positive regulation of transcription, DNA-dependent;0.00315600303339867!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00325666585713508!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00325666585713508!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00325666585713508!GO:0019867;outer membrane;0.0032712860114481!GO:0016790;thiolester hydrolase activity;0.0032712860114481!GO:0019843;rRNA binding;0.00327563781971595!GO:0006383;transcription from RNA polymerase III promoter;0.00331570626148389!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00333721106075288!GO:0044452;nucleolar part;0.00352760494495618!GO:0005048;signal sequence binding;0.00374904486616768!GO:0016585;chromatin remodeling complex;0.00377936770681004!GO:0006818;hydrogen transport;0.00382269631243345!GO:0016584;nucleosome positioning;0.00388141111553383!GO:0030521;androgen receptor signaling pathway;0.00398507880223155!GO:0005774;vacuolar membrane;0.00427071303002121!GO:0031968;organelle outer membrane;0.00428673413661157!GO:0043681;protein import into mitochondrion;0.00438186621037782!GO:0015992;proton transport;0.00485450786223584!GO:0033157;regulation of intracellular protein transport;0.00511256141711346!GO:0042306;regulation of protein import into nucleus;0.00511256141711346!GO:0008287;protein serine/threonine phosphatase complex;0.00524027079512326!GO:0043414;biopolymer methylation;0.0052478025887978!GO:0005669;transcription factor TFIID complex;0.00528292946923897!GO:0051329;interphase of mitotic cell cycle;0.0054924007567873!GO:0019901;protein kinase binding;0.0054924007567873!GO:0005798;Golgi-associated vesicle;0.0054924007567873!GO:0006468;protein amino acid phosphorylation;0.00552529671084294!GO:0005762;mitochondrial large ribosomal subunit;0.00555877792992781!GO:0000315;organellar large ribosomal subunit;0.00555877792992781!GO:0000139;Golgi membrane;0.00582448201837588!GO:0046474;glycerophospholipid biosynthetic process;0.00589872297904565!GO:0008033;tRNA processing;0.00590206488769583!GO:0030522;intracellular receptor-mediated signaling pathway;0.00618330757184238!GO:0008624;induction of apoptosis by extracellular signals;0.00619776994143324!GO:0033549;MAP kinase phosphatase activity;0.00639967047810975!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.00639967047810975!GO:0043621;protein self-association;0.00648264781320872!GO:0051059;NF-kappaB binding;0.00656166447266565!GO:0032259;methylation;0.00675048911725004!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00679262891222255!GO:0008276;protein methyltransferase activity;0.0071015941482064!GO:0042101;T cell receptor complex;0.00711460293635532!GO:0045603;positive regulation of endothelial cell differentiation;0.0071216377014546!GO:0019210;kinase inhibitor activity;0.00720727324868085!GO:0003711;transcription elongation regulator activity;0.00753253335188776!GO:0016311;dephosphorylation;0.00765370615864976!GO:0030258;lipid modification;0.00765964240331238!GO:0004722;protein serine/threonine phosphatase activity;0.00765964240331238!GO:0000287;magnesium ion binding;0.00774316336904187!GO:0004527;exonuclease activity;0.00795553730660021!GO:0048500;signal recognition particle;0.00820409320426835!GO:0031252;leading edge;0.00834456024847676!GO:0005765;lysosomal membrane;0.00903620150887594!GO:0044437;vacuolar part;0.00910796812765924!GO:0032200;telomere organization and biogenesis;0.00924541556598048!GO:0000723;telomere maintenance;0.00924541556598048!GO:0001772;immunological synapse;0.00939627587314905!GO:0030658;transport vesicle membrane;0.00939627587314905!GO:0051336;regulation of hydrolase activity;0.00952047736952852!GO:0000049;tRNA binding;0.00960904753202156!GO:0000118;histone deacetylase complex;0.00973311766575077!GO:0004860;protein kinase inhibitor activity;0.0097720315203562!GO:0022890;inorganic cation transmembrane transporter activity;0.00999251362503414!GO:0003684;damaged DNA binding;0.0101236682662192!GO:0005657;replication fork;0.0101652200634198!GO:0051052;regulation of DNA metabolic process;0.010511517369942!GO:0006376;mRNA splice site selection;0.0105686147981236!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0105686147981236!GO:0032508;DNA duplex unwinding;0.0106383865823037!GO:0032392;DNA geometric change;0.0106383865823037!GO:0043433;negative regulation of transcription factor activity;0.0107096977892913!GO:0017091;AU-rich element binding;0.0107096977892913!GO:0050779;RNA destabilization;0.0107096977892913!GO:0000289;poly(A) tail shortening;0.0107096977892913!GO:0000279;M phase;0.0110971098018487!GO:0051098;regulation of binding;0.0113525503340677!GO:0051325;interphase;0.0113534709373986!GO:0009893;positive regulation of metabolic process;0.0114598884943769!GO:0051539;4 iron, 4 sulfur cluster binding;0.0114598884943769!GO:0000781;chromosome, telomeric region;0.0114598884943769!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.011623201198109!GO:0051235;maintenance of localization;0.011623201198109!GO:0000082;G1/S transition of mitotic cell cycle;0.0116552396074498!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0118497373547082!GO:0046983;protein dimerization activity;0.0119703011773993!GO:0004518;nuclease activity;0.012043165182877!GO:0019904;protein domain specific binding;0.0122010047188481!GO:0048487;beta-tubulin binding;0.0122395994432981!GO:0040029;regulation of gene expression, epigenetic;0.0122395994432981!GO:0003702;RNA polymerase II transcription factor activity;0.0122395994432981!GO:0006302;double-strand break repair;0.0126227251650748!GO:0042990;regulation of transcription factor import into nucleus;0.0126278658909824!GO:0042991;transcription factor import into nucleus;0.0126278658909824!GO:0016791;phosphoric monoester hydrolase activity;0.0127199713965709!GO:0006919;caspase activation;0.0127348964864215!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0129666449887202!GO:0000209;protein polyubiquitination;0.0130628496889073!GO:0050852;T cell receptor signaling pathway;0.0131022375142194!GO:0033116;ER-Golgi intermediate compartment membrane;0.0132058863256995!GO:0046854;phosphoinositide phosphorylation;0.0133488840832465!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0135282249025992!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0135282249025992!GO:0050811;GABA receptor binding;0.0136845432276375!GO:0031902;late endosome membrane;0.0142791778291512!GO:0000119;mediator complex;0.0143651332894759!GO:0019900;kinase binding;0.0144506818927021!GO:0047485;protein N-terminus binding;0.0146854020507016!GO:0006839;mitochondrial transport;0.0147276766967615!GO:0015923;mannosidase activity;0.0149657045973394!GO:0003678;DNA helicase activity;0.0150023886298852!GO:0030660;Golgi-associated vesicle membrane;0.0150199997301557!GO:0045321;leukocyte activation;0.0154139278956461!GO:0005819;spindle;0.0154558250434499!GO:0007034;vacuolar transport;0.0154558250434499!GO:0009117;nucleotide metabolic process;0.0156284406658072!GO:0008312;7S RNA binding;0.0160508066575105!GO:0003725;double-stranded RNA binding;0.0166072159329574!GO:0030118;clathrin coat;0.0170347660829566!GO:0006626;protein targeting to mitochondrion;0.0170347660829566!GO:0005869;dynactin complex;0.0170485371423346!GO:0050870;positive regulation of T cell activation;0.0170485371423346!GO:0033673;negative regulation of kinase activity;0.0170528857114555!GO:0006469;negative regulation of protein kinase activity;0.0170528857114555!GO:0016279;protein-lysine N-methyltransferase activity;0.0170528857114555!GO:0018024;histone-lysine N-methyltransferase activity;0.0170528857114555!GO:0016278;lysine N-methyltransferase activity;0.0170528857114555!GO:0046467;membrane lipid biosynthetic process;0.0171704711636148!GO:0000059;protein import into nucleus, docking;0.0172737500522622!GO:0007006;mitochondrial membrane organization and biogenesis;0.0174618558260391!GO:0000314;organellar small ribosomal subunit;0.0176654546531519!GO:0005763;mitochondrial small ribosomal subunit;0.0176654546531519!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.017782288129362!GO:0046834;lipid phosphorylation;0.0184718699146095!GO:0004721;phosphoprotein phosphatase activity;0.0185556939645757!GO:0006354;RNA elongation;0.0185556939645757!GO:0031461;cullin-RING ubiquitin ligase complex;0.0188358859703991!GO:0051087;chaperone binding;0.0189698875487089!GO:0032386;regulation of intracellular transport;0.0196863893049753!GO:0043281;regulation of caspase activity;0.0197110725035676!GO:0051092;activation of NF-kappaB transcription factor;0.01979098344626!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0198125776125747!GO:0045047;protein targeting to ER;0.0198125776125747!GO:0016569;covalent chromatin modification;0.0198352793262101!GO:0005096;GTPase activator activity;0.0201243952236428!GO:0043549;regulation of kinase activity;0.0210183518492911!GO:0007004;telomere maintenance via telomerase;0.0211372382742051!GO:0008637;apoptotic mitochondrial changes;0.0212384310049994!GO:0032507;maintenance of cellular protein localization;0.0212754550704281!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.021448072548463!GO:0051338;regulation of transferase activity;0.021448072548463!GO:0006289;nucleotide-excision repair;0.021488391742724!GO:0043280;positive regulation of caspase activity;0.0222724119866527!GO:0006984;ER-nuclear signaling pathway;0.0224610442642676!GO:0019058;viral infectious cycle;0.0227463664428765!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0230161400822557!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0237412932564816!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0241383666968661!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0244503873377713!GO:0031647;regulation of protein stability;0.0249625666942865!GO:0016570;histone modification;0.0251586105703802!GO:0030880;RNA polymerase complex;0.0254744553896299!GO:0006406;mRNA export from nucleus;0.0258410084574133!GO:0016605;PML body;0.0260871459885224!GO:0046426;negative regulation of JAK-STAT cascade;0.0271556230124935!GO:0043022;ribosome binding;0.0271967675222888!GO:0043087;regulation of GTPase activity;0.0277022028092133!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0279057059213327!GO:0006595;polyamine metabolic process;0.0283471320733141!GO:0030127;COPII vesicle coat;0.0284555956286459!GO:0012507;ER to Golgi transport vesicle membrane;0.0284555956286459!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0285143639618668!GO:0015002;heme-copper terminal oxidase activity;0.0285143639618668!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0285143639618668!GO:0004129;cytochrome-c oxidase activity;0.0285143639618668!GO:0016788;hydrolase activity, acting on ester bonds;0.0287956859152697!GO:0004177;aminopeptidase activity;0.0288031858631301!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0289897646041565!GO:0042054;histone methyltransferase activity;0.0292117627712188!GO:0004197;cysteine-type endopeptidase activity;0.0292117627712188!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.030130430864551!GO:0045185;maintenance of protein localization;0.0303558638188763!GO:0016859;cis-trans isomerase activity;0.0304004704652913!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0311072600187452!GO:0000776;kinetochore;0.0316288412793446!GO:0050865;regulation of cell activation;0.0318727032345555!GO:0006470;protein amino acid dephosphorylation;0.0319142534180392!GO:0006268;DNA unwinding during replication;0.0320955268378792!GO:0030968;unfolded protein response;0.032201417633127!GO:0004402;histone acetyltransferase activity;0.0322370435601146!GO:0004468;lysine N-acetyltransferase activity;0.0322370435601146!GO:0008097;5S rRNA binding;0.0323531933483494!GO:0051249;regulation of lymphocyte activation;0.0323531933483494!GO:0005521;lamin binding;0.0324528898254861!GO:0030134;ER to Golgi transport vesicle;0.0327689693497871!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0335281609011042!GO:0006672;ceramide metabolic process;0.0340559490494348!GO:0051348;negative regulation of transferase activity;0.0341680112375545!GO:0033239;negative regulation of amine metabolic process;0.0342979427529205!GO:0045763;negative regulation of amino acid metabolic process;0.0342979427529205!GO:0001933;negative regulation of protein amino acid phosphorylation;0.0342979427529205!GO:0042608;T cell receptor binding;0.035328020887782!GO:0000303;response to superoxide;0.0356063911775662!GO:0045815;positive regulation of gene expression, epigenetic;0.0359368369010891!GO:0031901;early endosome membrane;0.0359481578135251!GO:0006013;mannose metabolic process;0.0360932233905385!GO:0009116;nucleoside metabolic process;0.0363172422467254!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0363596294494747!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0363596294494747!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0363596294494747!GO:0051651;maintenance of cellular localization;0.0364447365626789!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0365848544959992!GO:0045859;regulation of protein kinase activity;0.0371642759389472!GO:0030145;manganese ion binding;0.0372066903718684!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0372366662758612!GO:0000428;DNA-directed RNA polymerase complex;0.0372366662758612!GO:0030217;T cell differentiation;0.0375141174703838!GO:0015980;energy derivation by oxidation of organic compounds;0.037694809945971!GO:0046979;TAP2 binding;0.037694809945971!GO:0046977;TAP binding;0.037694809945971!GO:0046978;TAP1 binding;0.037694809945971!GO:0042393;histone binding;0.0377575869618795!GO:0030433;ER-associated protein catabolic process;0.0378561811412707!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0378561811412707!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0378986308141363!GO:0042809;vitamin D receptor binding;0.0380218979295781!GO:0019079;viral genome replication;0.0381603031070076!GO:0035258;steroid hormone receptor binding;0.0382783479776075!GO:0046519;sphingoid metabolic process;0.038505996731971!GO:0046578;regulation of Ras protein signal transduction;0.0386772500335077!GO:0006661;phosphatidylinositol biosynthetic process;0.0393315793305017!GO:0008536;Ran GTPase binding;0.0393858113261705!GO:0031325;positive regulation of cellular metabolic process;0.0404714057562471!GO:0045746;negative regulation of Notch signaling pathway;0.0406613007352761!GO:0000060;protein import into nucleus, translocation;0.0418887283824763!GO:0016272;prefoldin complex;0.0420167248371714!GO:0006278;RNA-dependent DNA replication;0.0422493366512305!GO:0001667;ameboidal cell migration;0.0424477811512443!GO:0032027;myosin light chain binding;0.0424477811512443!GO:0030097;hemopoiesis;0.0424696100909837!GO:0008138;protein tyrosine/serine/threonine phosphatase activity;0.0426802489740707!GO:0006914;autophagy;0.043312343044456!GO:0016853;isomerase activity;0.0436363411167035!GO:0009165;nucleotide biosynthetic process;0.0441742610081827!GO:0050863;regulation of T cell activation;0.0444249507125884!GO:0045792;negative regulation of cell size;0.0446583147921486!GO:0006506;GPI anchor biosynthetic process;0.0460919417878621!GO:0051051;negative regulation of transport;0.0465409209468238!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0469131570693791!GO:0030137;COPI-coated vesicle;0.0469672678586662!GO:0045947;negative regulation of translational initiation;0.0480379921186475!GO:0001819;positive regulation of cytokine production;0.0483954251220326!GO:0051457;maintenance of protein localization in nucleus;0.0486664581247518!GO:0006505;GPI anchor metabolic process;0.0487234917276323!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0490360962630181!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0490360962630181!GO:0016763;transferase activity, transferring pentosyl groups;0.0491716897098843!GO:0022406;membrane docking;0.0492940624023676!GO:0048278;vesicle docking;0.0492940624023676!GO:0000738;DNA catabolic process, exonucleolytic;0.0493264051183816!GO:0006284;base-excision repair;0.0494453979778715
|sample_id=11306
|sample_id=11306
|sample_note=
|sample_note=
Line 76: Line 105:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=PITX1..3:3.76748161535;FOX{D1,D2}:3.33747208357;PAX3,7:3.2424757632;BPTF:3.22719722364;CREB1:3.18441851256;ZBTB16:3.13075750659;FOXP1:3.10521665664;ATF4:3.00714692119;ATF5_CREB3:2.70734267244;RORA:2.69300340595;NKX6-1,2:2.58630877255;RFX2..5_RFXANK_RFXAP:2.57756131989;FOXO1,3,4:2.49023030245;RUNX1..3:2.44663582031;TOPORS:2.43664595371;CDX1,2,4:2.32625295977;FOXN1:2.29137633295;FOX{F1,F2,J1}:2.25432862372;IKZF2:2.10632344122;NFKB1_REL_RELA:1.92487469291;RFX1:1.74992337337;ELF1,2,4:1.73310744319;PAX2:1.69501502912;DMAP1_NCOR{1,2}_SMARC:1.68951782979;PAX4:1.64257183886;ETS1,2:1.45748122149;NKX2-1,4:1.43736876876;HMX1:1.43491453099;AIRE:1.41269380195;BREu{core}:1.40965051082;LEF1_TCF7_TCF7L1,2:1.31506612219;JUN:1.25791550514;SPI1:1.25710328027;T:1.17952281579;ATF2:1.10514154122;ATF6:1.09252165512;TGIF1:1.07033419591;TBX4,5:1.06973480771;FOX{I1,J2}:1.06720152498;ZNF384:0.969292505206;SPIB:0.85217449414;NKX3-1:0.84541729239;HBP1_HMGB_SSRP1_UBTF:0.803152569042;IRF1,2:0.76909582363;RREB1:0.724842329354;NFIL3:0.701270802505;HIF1A:0.699015852697;FOXD3:0.683830451432;HOXA9_MEIS1:0.682531920314;EGR1..3:0.654744215404;PAX6:0.586136129616;GATA6:0.522271142375;TLX2:0.472733692273;EP300:0.449994385756;ZEB1:0.44341794563;POU3F1..4:0.40754592559;NFATC1..3:0.406258156669;SMAD1..7,9:0.39927223307;MAFB:0.380662011939;HOX{A6,A7,B6,B7}:0.365938600324;NFE2L1:0.342138715566;NANOG{mouse}:0.322244490093;SOX5:0.294444868317;SREBF1,2:0.292768936843;HMGA1,2:0.267147179515;PDX1:0.262980205445;MYB:0.237497274314;SNAI1..3:0.215619599162;NFIX:0.203518097929;CUX2:0.132869625896;FOSL2:0.116010450664;SPZ1:0.113669351639;POU2F1..3:0.0873189688221;MYFfamily:0.0831515126348;IRF7:0.0567673224198;FOXQ1:0.049214840308;FOXP3:0.0254381274744;AHR_ARNT_ARNT2:0.0202902299843;FOS_FOS{B,L1}_JUN{B,D}:0.019953161362;SOX2:-0.0320005634328;CRX:-0.0486080603181;NR5A1,2:-0.0573322810873;EVI1:-0.0826529481661;ELK1,4_GABP{A,B1}:-0.0879207672844;STAT5{A,B}:-0.0931217976956;LMO2:-0.100384521994;DBP:-0.144112284995;STAT2,4,6:-0.161253660771;PBX1:-0.16126644093;BACH2:-0.16735391253;HES1:-0.176353228974;FOXM1:-0.188569451716;MED-1{core}:-0.213156437969;PPARG:-0.223750369705;MTE{core}:-0.307526321299;E2F1..5:-0.314024215206;FOXL1:-0.319218658348;NKX2-2,8:-0.323673782577;POU1F1:-0.333322434598;YY1:-0.372167976173;NFE2:-0.384597227705;GCM1,2:-0.395740234754;CEBPA,B_DDIT3:-0.420374497119;UFEwm:-0.42264343335;HNF4A_NR2F1,2:-0.430233915604;GATA4:-0.453476329176;NR6A1:-0.464103799217;AR:-0.484960400864;OCT4_SOX2{dimer}:-0.491470328321;NRF1:-0.5184021076;SRF:-0.521863214937;MZF1:-0.532630484064;NFY{A,B,C}:-0.540230233864;ZFP161:-0.543421957915;TFDP1:-0.550608664231;bHLH_family:-0.604921833602;ALX4:-0.61245101332;MYOD1:-0.617923604365;ZBTB6:-0.663890429885;RXRA_VDR{dimer}:-0.670084447274;PAX5:-0.701738627638;HNF1A:-0.711744951135;GLI1..3:-0.780541022607;HLF:-0.812062941653;NFE2L2:-0.833463591013;STAT1,3:-0.834298324604;PATZ1:-0.863167576922;NHLH1,2:-0.866753990465;HAND1,2:-0.872448267738;TAL1_TCF{3,4,12}:-0.881141449221;SOX{8,9,10}:-0.917831815418;FOXA2:-0.948743783117;PRRX1,2:-0.964028826726;TFAP2B:-0.979418850726;POU6F1:-0.999442750987;NANOG:-1.00612535314;ONECUT1,2:-1.00833854872;MTF1:-1.00889825486;REST:-1.02072849633;RBPJ:-1.0441438962;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.05263970815;ZNF423:-1.08199280579;MEF2{A,B,C,D}:-1.09286388893;PAX8:-1.0933435722;ARID5B:-1.16489957486;TFAP4:-1.18313586941;ZNF143:-1.19897367129;ZIC1..3:-1.21661974399;LHX3,4:-1.26182896437;TEF:-1.27174576936;TFAP2{A,C}:-1.28665105149;MAZ:-1.30138020792;ALX1:-1.30175200996;SOX17:-1.32109216943;SP1:-1.34894884126;MYBL2:-1.3542980229;TBP:-1.36377240612;XBP1:-1.37738444422;GFI1B:-1.40746578734;GFI1:-1.480651115;CDC5L:-1.48829779966;HIC1:-1.51530876627;POU5F1:-1.57819188516;HOX{A5,B5}:-1.58246540508;NR1H4:-1.60630866474;XCPE1{core}:-1.60997815662;HSF1,2:-1.64141519622;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.65002444781;TP53:-1.65969122936;PRDM1:-1.66327058219;ZNF238:-1.67550988772;TFCP2:-1.68470669872;NKX2-3_NKX2-5:-1.7036846249;ADNP_IRX_SIX_ZHX:-1.70775823548;TEAD1:-1.72299979456;TLX1..3_NFIC{dimer}:-1.74099136856;KLF4:-1.78612101907;GTF2A1,2:-1.82598543425;GTF2I:-1.86496625654;ZNF148:-1.94069867522;NKX3-2:-1.95091448313;VSX1,2:-1.97673980089;HOX{A4,D4}:-2.00383992988;EN1,2:-2.09727547897;RXR{A,B,G}:-2.15806245002;ESR1:-2.17892488408;ESRRA:-2.18888128933;GZF1:-2.20938519516;EBF1:-2.28316104604;IKZF1:-2.58281045826;NR3C1:-3.03722478138;PAX1,9:-3.0730478509
|top_motifs=PITX1..3:3.76748161535;FOX{D1,D2}:3.33747208357;PAX3,7:3.2424757632;BPTF:3.22719722364;CREB1:3.18441851256;ZBTB16:3.13075750659;FOXP1:3.10521665664;ATF4:3.00714692119;ATF5_CREB3:2.70734267244;RORA:2.69300340595;NKX6-1,2:2.58630877255;RFX2..5_RFXANK_RFXAP:2.57756131989;FOXO1,3,4:2.49023030245;RUNX1..3:2.44663582031;TOPORS:2.43664595371;CDX1,2,4:2.32625295977;FOXN1:2.29137633295;FOX{F1,F2,J1}:2.25432862372;IKZF2:2.10632344122;NFKB1_REL_RELA:1.92487469291;RFX1:1.74992337337;ELF1,2,4:1.73310744319;PAX2:1.69501502912;DMAP1_NCOR{1,2}_SMARC:1.68951782979;PAX4:1.64257183886;ETS1,2:1.45748122149;NKX2-1,4:1.43736876876;HMX1:1.43491453099;AIRE:1.41269380195;BREu{core}:1.40965051082;LEF1_TCF7_TCF7L1,2:1.31506612219;JUN:1.25791550514;SPI1:1.25710328027;T:1.17952281579;ATF2:1.10514154122;ATF6:1.09252165512;TGIF1:1.07033419591;TBX4,5:1.06973480771;FOX{I1,J2}:1.06720152498;ZNF384:0.969292505206;SPIB:0.85217449414;NKX3-1:0.84541729239;HBP1_HMGB_SSRP1_UBTF:0.803152569042;IRF1,2:0.76909582363;RREB1:0.724842329354;NFIL3:0.701270802505;HIF1A:0.699015852697;FOXD3:0.683830451432;HOXA9_MEIS1:0.682531920314;EGR1..3:0.654744215404;PAX6:0.586136129616;GATA6:0.522271142375;TLX2:0.472733692273;EP300:0.449994385756;ZEB1:0.44341794563;POU3F1..4:0.40754592559;NFATC1..3:0.406258156669;SMAD1..7,9:0.39927223307;MAFB:0.380662011939;HOX{A6,A7,B6,B7}:0.365938600324;NFE2L1:0.342138715566;NANOG{mouse}:0.322244490093;SOX5:0.294444868317;SREBF1,2:0.292768936843;HMGA1,2:0.267147179515;PDX1:0.262980205445;MYB:0.237497274314;SNAI1..3:0.215619599162;NFIX:0.203518097929;CUX2:0.132869625896;FOSL2:0.116010450664;SPZ1:0.113669351639;POU2F1..3:0.0873189688221;MYFfamily:0.0831515126348;IRF7:0.0567673224198;FOXQ1:0.049214840308;FOXP3:0.0254381274744;AHR_ARNT_ARNT2:0.0202902299843;FOS_FOS{B,L1}_JUN{B,D}:0.019953161362;SOX2:-0.0320005634328;CRX:-0.0486080603181;NR5A1,2:-0.0573322810873;EVI1:-0.0826529481661;ELK1,4_GABP{A,B1}:-0.0879207672844;STAT5{A,B}:-0.0931217976956;LMO2:-0.100384521994;DBP:-0.144112284995;STAT2,4,6:-0.161253660771;PBX1:-0.16126644093;BACH2:-0.16735391253;HES1:-0.176353228974;FOXM1:-0.188569451716;MED-1{core}:-0.213156437969;PPARG:-0.223750369705;MTE{core}:-0.307526321299;E2F1..5:-0.314024215206;FOXL1:-0.319218658348;NKX2-2,8:-0.323673782577;POU1F1:-0.333322434598;YY1:-0.372167976173;NFE2:-0.384597227705;GCM1,2:-0.395740234754;CEBPA,B_DDIT3:-0.420374497119;UFEwm:-0.42264343335;HNF4A_NR2F1,2:-0.430233915604;GATA4:-0.453476329176;NR6A1:-0.464103799217;AR:-0.484960400864;OCT4_SOX2{dimer}:-0.491470328321;NRF1:-0.5184021076;SRF:-0.521863214937;MZF1:-0.532630484064;NFY{A,B,C}:-0.540230233864;ZFP161:-0.543421957915;TFDP1:-0.550608664231;bHLH_family:-0.604921833602;ALX4:-0.61245101332;MYOD1:-0.617923604365;ZBTB6:-0.663890429885;RXRA_VDR{dimer}:-0.670084447274;PAX5:-0.701738627638;HNF1A:-0.711744951135;GLI1..3:-0.780541022607;HLF:-0.812062941653;NFE2L2:-0.833463591013;STAT1,3:-0.834298324604;PATZ1:-0.863167576922;NHLH1,2:-0.866753990465;HAND1,2:-0.872448267738;TAL1_TCF{3,4,12}:-0.881141449221;SOX{8,9,10}:-0.917831815418;FOXA2:-0.948743783117;PRRX1,2:-0.964028826726;TFAP2B:-0.979418850726;POU6F1:-0.999442750987;NANOG:-1.00612535314;ONECUT1,2:-1.00833854872;MTF1:-1.00889825486;REST:-1.02072849633;RBPJ:-1.0441438962;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.05263970815;ZNF423:-1.08199280579;MEF2{A,B,C,D}:-1.09286388893;PAX8:-1.0933435722;ARID5B:-1.16489957486;TFAP4:-1.18313586941;ZNF143:-1.19897367129;ZIC1..3:-1.21661974399;LHX3,4:-1.26182896437;TEF:-1.27174576936;TFAP2{A,C}:-1.28665105149;MAZ:-1.30138020792;ALX1:-1.30175200996;SOX17:-1.32109216943;SP1:-1.34894884126;MYBL2:-1.3542980229;TBP:-1.36377240612;XBP1:-1.37738444422;GFI1B:-1.40746578734;GFI1:-1.480651115;CDC5L:-1.48829779966;HIC1:-1.51530876627;POU5F1:-1.57819188516;HOX{A5,B5}:-1.58246540508;NR1H4:-1.60630866474;XCPE1{core}:-1.60997815662;HSF1,2:-1.64141519622;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.65002444781;TP53:-1.65969122936;PRDM1:-1.66327058219;ZNF238:-1.67550988772;TFCP2:-1.68470669872;NKX2-3_NKX2-5:-1.7036846249;ADNP_IRX_SIX_ZHX:-1.70775823548;TEAD1:-1.72299979456;TLX1..3_NFIC{dimer}:-1.74099136856;KLF4:-1.78612101907;GTF2A1,2:-1.82598543425;GTF2I:-1.86496625654;ZNF148:-1.94069867522;NKX3-2:-1.95091448313;VSX1,2:-1.97673980089;HOX{A4,D4}:-2.00383992988;EN1,2:-2.09727547897;RXR{A,B,G}:-2.15806245002;ESR1:-2.17892488408;ESRRA:-2.18888128933;GZF1:-2.20938519516;EBF1:-2.28316104604;IKZF1:-2.58281045826;NR3C1:-3.03722478138;PAX1,9:-3.0730478509
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11306-117C1;search_select_hide=table117:FF:11306-117C1
}}
}}

Latest revision as of 16:32, 3 June 2020

Name:CD4+ T Cells, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11955
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage57 years old adult
sexmale
age57
cell typet cell, CD4+
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberCD4T726
catalog number3H100-23-10
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005976
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11955 CAGE DRX008177 DRR009049
Accession ID Hg19

Library idBAMCTSS
CNhs11955 DRZ000474 DRZ001859
Accession ID Hg38

Library idBAMCTSS
CNhs11955 DRZ011824 DRZ013209
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005976
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10009.CTTGTA sRNA-Seq DRX037136 DRR041502
Accession ID Hg19

Library idBAMCTSS
SRhi10009.CTTGTA DRZ007144


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.338
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0635
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.258
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.907
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.786
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.144
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.657
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.574
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.796
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.571
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.144
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.693
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.169
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.144
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.868
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.574
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.786
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.864
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.339
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.617
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.338
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.217
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.457
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.801
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.72
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.693
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0725
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.574
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.41
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.772
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.569
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.785
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.657
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.144
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.876
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.657
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340.41
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.144
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11955

Jaspar motifP-value
MA0002.20.00301
MA0003.10.257
MA0004.10.915
MA0006.10.151
MA0007.10.857
MA0009.10.0719
MA0014.10.734
MA0017.10.185
MA0018.21.92494e-7
MA0019.10.442
MA0024.10.678
MA0025.10.312
MA0027.10.937
MA0028.10.335
MA0029.10.245
MA0030.10.0789
MA0031.11.72024e-4
MA0035.20.768
MA0038.10.0135
MA0039.20.225
MA0040.10.536
MA0041.10.229
MA0042.10.552
MA0043.10.0341
MA0046.10.0501
MA0047.20.646
MA0048.10.748
MA0050.10.00179
MA0051.10.219
MA0052.10.0342
MA0055.10.755
MA0057.10.186
MA0058.10.801
MA0059.10.894
MA0060.10.00533
MA0061.15.48624e-9
MA0062.24.19552e-5
MA0065.20.921
MA0066.10.929
MA0067.10.0232
MA0068.10.987
MA0069.10.583
MA0070.10.405
MA0071.10.969
MA0072.10.322
MA0073.10.805
MA0074.10.971
MA0076.10.2
MA0077.10.0643
MA0078.10.964
MA0079.20.544
MA0080.26.48188e-7
MA0081.10.0655
MA0083.10.175
MA0084.10.594
MA0087.10.451
MA0088.10.427
MA0090.17.90209e-4
MA0091.10.253
MA0092.10.919
MA0093.10.762
MA0099.20.0947
MA0100.10.864
MA0101.11.16697e-5
MA0102.20.815
MA0103.10.459
MA0104.20.42
MA0105.11.6208e-7
MA0106.10.0669
MA0107.14.26221e-5
MA0108.22.47207e-5
MA0111.10.304
MA0112.20.433
MA0113.10.436
MA0114.10.351
MA0115.10.167
MA0116.10.0507
MA0117.10.0514
MA0119.10.903
MA0122.10.665
MA0124.10.16
MA0125.10.0992
MA0131.10.159
MA0135.10.102
MA0136.12.34571e-9
MA0137.20.0348
MA0138.20.0686
MA0139.10.854
MA0140.10.98
MA0141.10.232
MA0142.10.131
MA0143.10.194
MA0144.10.166
MA0145.10.0142
MA0146.10.762
MA0147.10.373
MA0148.10.936
MA0149.10.474
MA0150.10.645
MA0152.10.00542
MA0153.10.132
MA0154.10.805
MA0155.10.265
MA0156.11.24132e-5
MA0157.16.83819e-4
MA0159.10.934
MA0160.10.498
MA0162.10.241
MA0163.10.00518
MA0164.10.541
MA0258.10.686
MA0259.10.429



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11955

Novel motifP-value
10.638
100.00777
1000.456
1010.114
1020.784
1030.294
1040.899
1050.852
1060.22
1070.143
1080.966
1090.795
110.487
1100.596
1110.291
1120.897
1130.252
1140.619
1150.778
1160.473
1170.00574
1180.386
1190.812
120.703
1200.432
1210.798
1220.604
1237.16985e-8
1240.769
1250.911
1260.936
1270.254
1280.998
1290.433
130.562
1300.165
1310.796
1320.342
1330.673
1340.808
1350.271
1360.936
1370.0371
1380.476
1390.0893
140.595
1400.323
1410.928
1420.333
1430.147
1440.845
1450.907
1460.342
1470.0608
1480.216
1490.235
150.339
1500.96
1510.49
1520.524
1530.386
1540.0708
1550.112
1560.749
1570.757
1580.00869
1590.895
160.307
1600.237
1610.468
1620.0942
1630.874
1640.0312
1650.936
1660.404
1670.0744
1680.412
1690.28
170.66
180.59
190.0802
20.182
200.144
210.59
220.193
230.764
240.387
250.196
260.592
270.6
280.394
290.0568
30.337
300.0178
310.523
320.0454
330.461
340.203
350.137
360.141
370.453
380.832
390.54
40.732
400.651
410.453
420.211
430.528
440.861
450.109
460.651
470.443
480.746
490.0929
50.731
500.459
510.931
520.79
530.19
540.885
550.959
560.825
570.583
580.196
590.28
60.663
600.552
610.226
620.249
630.908
640.749
650.644
660.17
670.567
680.811
690.684
70.772
700.0918
710.169
720.586
730.928
740.758
750.0215
760.0368
770.00714
780.582
790.598
80.588
800.244
810.741
820.449
830.901
840.0637
850.891
860.0808
870.449
880.897
890.00465
90.445
900.262
910.467
920.616
930.377
940.447
950.278
960.856
970.279
980.274
991.05599e-4



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11955


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000624 (CD4-positive, alpha-beta T cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000031 (CD4-positive T cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)

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