FF:12206-129D1: Difference between revisions

Latest revision as of 18:34, 4 June 2020

Name:	CD8+ T Cells (pluriselect), donor090612, donation2
Species:	Human (Homo sapiens)
Library ID:	CNhs12184,RDhi10018
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	NA
age	NA
cell type	T cell, CD8+
cell line	NA
company	NA
collaboration	Matched_genome_OSC(contact:Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
RNA-Seq		SAMD00013694

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12184		CAGE		DRX008070		DRR008942
RDhi10018		RNA-Seq		DRX012351		DRR013799

Accession ID Hg19

Library id		BAM		CTSS
CNhs12184		DRZ000367		DRZ001752
RDhi10018		DRZ003000

Accession ID Hg38

Library id		BAM		CTSS
CNhs12184		DRZ011717		DRZ013102
RDhi10018

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0.168
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.165
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.224
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.00584
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0655
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.39
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.345
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.84
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.525
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0923
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.236
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.0923
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.375
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0.0923
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.462
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.0427
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.61
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.138
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.139
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.289
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.162
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.527
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.117
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.547
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.168
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.304
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.116
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.339
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.362
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.958
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0.0923
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.84
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12184

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	2.89832e-10
MA0003.1	MA0003.1	0.482
MA0004.1	MA0004.1	0.944
MA0006.1	MA0006.1	0.508
MA0007.1	MA0007.1	0.954
MA0009.1	MA0009.1	0.202
MA0014.1	MA0014.1	0.98
MA0017.1	MA0017.1	0.0292
MA0018.2	MA0018.2	0.431
MA0019.1	MA0019.1	0.992
MA0024.1	MA0024.1	0.219
MA0025.1	MA0025.1	0.71
MA0027.1	MA0027.1	0.929
MA0028.1	MA0028.1	1.18661e-4
MA0029.1	MA0029.1	0.697
MA0030.1	MA0030.1	0.138
MA0031.1	MA0031.1	0.00834
MA0035.2	MA0035.2	0.212
MA0038.1	MA0038.1	0.0976
MA0039.2	MA0039.2	0.898
MA0040.1	MA0040.1	0.884
MA0041.1	MA0041.1	0.861
MA0042.1	MA0042.1	0.559
MA0043.1	MA0043.1	0.325
MA0046.1	MA0046.1	0.795
MA0047.2	MA0047.2	0.175
MA0048.1	MA0048.1	0.28
MA0050.1	MA0050.1	4.61348e-9
MA0051.1	MA0051.1	6.31316e-5
MA0052.1	MA0052.1	0.00109
MA0055.1	MA0055.1	0.394
MA0057.1	MA0057.1	0.685
MA0058.1	MA0058.1	0.81
MA0059.1	MA0059.1	0.547
MA0060.1	MA0060.1	0.0437
MA0061.1	MA0061.1	0.00469
MA0062.2	MA0062.2	4.28177e-18
MA0065.2	MA0065.2	0.0386
MA0066.1	MA0066.1	0.157
MA0067.1	MA0067.1	0.643
MA0068.1	MA0068.1	0.424
MA0069.1	MA0069.1	0.747
MA0070.1	MA0070.1	0.411
MA0071.1	MA0071.1	0.696
MA0072.1	MA0072.1	0.439
MA0073.1	MA0073.1	0.797
MA0074.1	MA0074.1	0.642
MA0076.1	MA0076.1	1.18089e-7
MA0077.1	MA0077.1	0.0862
MA0078.1	MA0078.1	0.751
MA0079.2	MA0079.2	0.563
MA0080.2	MA0080.2	2.80608e-15
MA0081.1	MA0081.1	0.00427
MA0083.1	MA0083.1	0.0353
MA0084.1	MA0084.1	0.449
MA0087.1	MA0087.1	0.652
MA0088.1	MA0088.1	0.0603
MA0090.1	MA0090.1	2.86221e-4
MA0091.1	MA0091.1	0.844
MA0092.1	MA0092.1	0.921
MA0093.1	MA0093.1	0.975
MA0099.2	MA0099.2	0.0394
MA0100.1	MA0100.1	0.512
MA0101.1	MA0101.1	0.675
MA0102.2	MA0102.2	0.286
MA0103.1	MA0103.1	0.148
MA0104.2	MA0104.2	0.277
MA0105.1	MA0105.1	1.08006e-5
MA0106.1	MA0106.1	0.355
MA0107.1	MA0107.1	0.844
MA0108.2	MA0108.2	1.57164e-10
MA0111.1	MA0111.1	0.207
MA0112.2	MA0112.2	0.0863
MA0113.1	MA0113.1	0.706
MA0114.1	MA0114.1	0.271
MA0115.1	MA0115.1	0.774
MA0116.1	MA0116.1	1.02917e-5
MA0117.1	MA0117.1	0.725
MA0119.1	MA0119.1	0.715
MA0122.1	MA0122.1	0.23
MA0124.1	MA0124.1	0.491
MA0125.1	MA0125.1	0.308
MA0131.1	MA0131.1	0.603
MA0135.1	MA0135.1	0.829
MA0136.1	MA0136.1	1.19946e-27
MA0137.2	MA0137.2	0.0105
MA0138.2	MA0138.2	0.995
MA0139.1	MA0139.1	0.0103
MA0140.1	MA0140.1	0.213
MA0141.1	MA0141.1	0.984
MA0142.1	MA0142.1	0.568
MA0143.1	MA0143.1	0.377
MA0144.1	MA0144.1	0.0949
MA0145.1	MA0145.1	0.943
MA0146.1	MA0146.1	0.3
MA0147.1	MA0147.1	0.31
MA0148.1	MA0148.1	0.404
MA0149.1	MA0149.1	0.234
MA0150.1	MA0150.1	0.653
MA0152.1	MA0152.1	0.037
MA0153.1	MA0153.1	0.261
MA0154.1	MA0154.1	0.00443
MA0155.1	MA0155.1	0.769
MA0156.1	MA0156.1	1.58714e-27
MA0157.1	MA0157.1	0.00938
MA0159.1	MA0159.1	0.0574
MA0160.1	MA0160.1	0.401
MA0162.1	MA0162.1	0.906
MA0163.1	MA0163.1	3.775e-10
MA0164.1	MA0164.1	0.39
MA0258.1	MA0258.1	0.121
MA0259.1	MA0259.1	0.689

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12184

Novel motif	Logo	P-value
1	1	0.189
10	10	0.0185
100	100	0.792
101	101	0.277
102	102	0.525
103	103	0.151
104	104	0.533
105	105	0.0874
106	106	0.511
107	107	0.243
108	108	0.645
109	109	0.0616
11	11	0.0778
110	110	0.44
111	111	0.358
112	112	0.449
113	113	0.143
114	114	0.206
115	115	0.307
116	116	0.929
117	117	0.00656
118	118	0.307
119	119	0.71
12	12	0.654
120	120	0.494
121	121	0.913
122	122	0.432
123	123	0.041
124	124	0.0963
125	125	0.699
126	126	0.262
127	127	0.294
128	128	0.635
129	129	0.359
13	13	0.65
130	130	0.751
131	131	0.784
132	132	0.838
133	133	0.753
134	134	0.753
135	135	0.249
136	136	0.934
137	137	0.0445
138	138	0.204
139	139	0.0171
14	14	0.256
140	140	0.0921
141	141	0.636
142	142	0.557
143	143	1.37755e-5
144	144	0.744
145	145	0.383
146	146	0.226
147	147	0.0179
148	148	0.114
149	149	0.883
15	15	0.0825
150	150	0.74
151	151	0.28
152	152	0.54
153	153	0.8
154	154	0.949
155	155	0.0239
156	156	0.479
157	157	0.352
158	158	0.283
159	159	0.0878
16	16	0.728
160	160	0.581
161	161	0.298
162	162	0.282
163	163	0.816
164	164	0.417
165	165	0.252
166	166	0.663
167	167	0.55
168	168	0.0991
169	169	0.445
17	17	0.742
18	18	0.603
19	19	0.656
2	2	0.538
20	20	0.738
21	21	0.309
22	22	0.781
23	23	0.947
24	24	0.407
25	25	0.0544
26	26	0.56
27	27	0.0397
28	28	0.395
29	29	0.125
3	3	0.0294
30	30	0.586
31	31	0.648
32	32	0.133
33	33	0.483
34	34	0.659
35	35	0.0722
36	36	0.0514
37	37	0.21
38	38	0.549
39	39	0.562
4	4	0.797
40	40	0.539
41	41	0.15
42	42	0.0515
43	43	0.226
44	44	0.535
45	45	0.958
46	46	0.125
47	47	0.0822
48	48	0.128
49	49	0.142
5	5	0.186
50	50	0.614
51	51	0.512
52	52	0.467
53	53	0.143
54	54	0.447
55	55	0.22
56	56	0.494
57	57	0.625
58	58	0.0327
59	59	0.259
6	6	0.96
60	60	0.245
61	61	0.131
62	62	0.0165
63	63	0.649
64	64	0.192
65	65	0.613
66	66	0.99
67	67	0.928
68	68	0.518
69	69	0.92
7	7	0.194
70	70	0.0172
71	71	0.106
72	72	0.0747
73	73	0.605
74	74	0.334
75	75	0.0356
76	76	0.295
77	77	0.698
78	78	0.161
79	79	0.408
8	8	0.878
80	80	0.00167
81	81	0.309
82	82	0.0942
83	83	0.984
84	84	0.395
85	85	0.733
86	86	0.156
87	87	0.607
88	88	0.775
89	89	0.876
9	9	0.358
90	90	0.0107
91	91	0.895
92	92	0.29
93	93	0.223
94	94	0.0625
95	95	0.0229
96	96	0.128
97	97	0.442
98	98	0.236
99	99	0.138

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12184

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
+|DRA_sample_Accession=RNA-Seq@SAMD00013694
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000144,CL:0000723,CL:0000048,CL:0000988,CL:0000548,CL:0000034,CL:0002032,CL:0000012,CL:0002320,CL:0000063,CL:0002371,CL:0000542,CL:0000219,CL:0000004,CL:0000134,CL:0000738,CL:0002087,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002420,CL:0002419,CL:0000790,CL:0000838,CL:0002031,CL:0000827,CL:0000037,CL:0000566,CL:0000625,CL:0000837,CL:0000051
+|accession_numbers=CAGE;DRX008070;DRR008942;DRZ000367;DRZ001752;DRZ011717;DRZ013102!RNA-Seq;DRX012351;DRR013799;DRZ003000;
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.00!99.92!PLEK;;chr5:133451294..133451310,+!p2@TCF7!1.95!87.61!TCF7;;chr17:45810594..45810608,+!p1@TBX21!1.82!65.59!TBX21;;chr3:27763807..27763822,-!p1@EOMES!1.82!65.11!EOMES;;chr2:192015701..192015743,-!p1@STAT4!1.81!85.95!STAT4;;chr3:63953435..63953499,+!p1@ATXN7!1.80!62.04!ATXN7;;chr9:117150254..117150271,-!p1@AKNA!1.72!136.86!AKNA;;chr4:109087445..109087463,-!p1@LEF1!1.72!51.62!LEF1;;chr7:50343634..50343717,+!p2@IKZF1!1.71!50.67!IKZF1;;chr1:25256756..25256774,-!p1@RUNX3!1.68!86.19!RUNX3;;chr2:231090433..231090469,+!p1@SP140!1.68!46.65!SP140;;chr2:192015750..192015793,-!p2@STAT4!1.67!61.33!STAT4;;chr5:133450365..133450444,+!p1@TCF7!1.66!194.39!TCF7;;chr2:68592394..68592405,+!p2@PLEK!1.61!39.54!PLEK;;chr17:37934365..37934387,-!p2@IKZF3!1.61!39.31!IKZF3;;chr11:47400078..47400106,-!p1@SPI1!1.55!34.57!SPI1;;chr14:75988771..75988826,+!p1@BATF!1.53!43.80!BATF;;chr19:16435625..16435682,+!p1@KLF2!1.51!950.90!KLF2;;chr7:50344251..50344288,+!p3@IKZF1!1.47!28.41!IKZF1;;chr20:50159198..50159299,-!p1@NFATC2!1.46!40.02!NFATC2;;chr1:26697243..26697258,-!p1@ZNF683!1.46!27.70!ZNF683;;chr5:133451347..133451358,+!p3@TCF7!1.45!27.23!TCF7;;chr6:106546808..106546833,+!p3@PRDM1!1.36!27.47!PRDM1;;chr19:19779619..19779670,+!p1@ZNF101!1.34!57.77!ZNF101;;chr4:109090075..109090095,-!p2@LEF1!1.34!20.84!LEF1;;chr20:56195474..56195506,-!p1@ZBP1!1.33!20.36!ZBP1;;chr4:57522166..57522260,-!p2@HOPX!1.31!22.49!HOPX;;chr3:18486354..18486377,-!p2@SATB1!1.30!23.68!SATB1;;chr2:231090471..231090504,+!p2@SP140!1.29!18.71!SP140;;chr7:50343895..50343936,+!p5@IKZF1!1.29!18.71!IKZF1;;chr15:60884706..60884743,-!p1@RORA!1.27!89.50!RORA;;chr3:71355163..71355209,-!p5@FOXP1!1.27!24.62!FOXP1;;chr7:50344289..50344323,+!p1@IKZF1!1.27!17.52!IKZF1;;chr13:74707894..74707947,-!p6@KLF12!1.26!19.18!KLF12;;chr17:37934204..37934241,-!p3@IKZF3!1.26!17.28!IKZF3;;chr13:41593425..41593480,-!p1@ELF1!1.25!105.84!ELF1;;chr10:8096772..8096787,+!p2@GATA3!1.25!19.65!GATA3;;chr3:71542615..71542644,-!p12@FOXP1!1.25!16.81!FOXP1;;chr6:391743..391759,+!p1@IRF4!1.24!16.34!IRF4;;chr10:8096631..8096660,+!p1@GATA3!1.23!19.42!GATA3;;chr4:57522598..57522664,-!p3@HOPX!1.23!16.10!HOPX;;chr3:71542684..71542720,-!p18@FOXP1!1.20!14.68!FOXP1;;chr17:38020392..38020477,-!p1@IKZF3!1.20!14.68!IKZF3;;chr8:67525443..67525459,-!p2@MYBL1!1.18!21.31!MYBL1;;chr17:37934280..37934299,-!p6@IKZF3!1.18!13.97!IKZF3;;chr11:128392273..128392308,-!p2@ETS1!1.16!57.06!ETS1;;chr11:128392085..128392232,-!p1@ETS1!1.14!427.62!ETS1;;chr11:128563948..128564003,+!p1@FLI1!1.12!146.57!FLI1;;chr17:38020557..38020572,-!p4@IKZF3!1.12!12.08!IKZF3;;chr21:36421535..36421610,-!p2@RUNX1!1.10!41.91!RUNX1;;chr14:64970670..64970712,-!p3@ZBTB25!1.08!24.15!ZBTB25;;chr4:109089901..109089930,-!p3@LEF1!1.08!11.13!LEF1;;chr17:38020516..38020544,-!p5@IKZF3!1.08!10.89!IKZF3;;chr8:60031619..60031676,-!p1@TOX!1.07!23.20!TOX;;chr6:106546731..106546755,+!p5@PRDM1!1.07!10.65!PRDM1;;chr21:36421347..36421380,-!p8@RUNX1!1.07!10.65!RUNX1;;chr6:91006518..91006570,-!p1@BACH2!1.06!24.39!BACH2;;chr1:92951607..92951661,-!p1@GFI1!1.06!10.42!GFI1;;chr4:57522674..57522699,-!p5@HOPX!1.06!10.42!HOPX;;chr2:97202991..97203043,+!p3@ARID5A!1.05!10.18!ARID5A;;chr3:71542651..71542683,-!p22@FOXP1!1.05!10.18!FOXP1;;chr14:75988831..75988847,+!p2@BATF!1.03!9.71!BATF;;chr19:38085768..38085821,+!p1@ZNF540!1.02!14.21!ZNF540;;chrX:106960285..106960299,-!p1@TSC22D3!1.01!254.06!TSC22D3;;chr16:89789271..89789291,+!p5@ZNF276!1.01!9.23!ZNF276;;chr12:54778471..54778528,-!p1@ZNF385A!1.01!9.23!ZNF385A;;chr14:69262947..69262986,-!p3@ZFP36L1!1.00!10.89!ZFP36L1;;chr11:47400062..47400077,-!p2@SPI1!1.00!9.00!SPI1;;chr17:38020481..38020506,-!p7@IKZF3!0.99!8.76!IKZF3;;chr3:18480217..18480239,-!p3@SATB1!0.98!8.52!SATB1;;chr4:109088940..109089037,-!p4@LEF1!0.97!8.29!LEF1;;chr3:71179699..71179744,-!p2@FOXP1!0.96!62.04!FOXP1;;chr19:53289995..53290050,-!p1@ZNF600!0.96!34.10!ZNF600;;chr9:3525727..3525828,-!p2@RFX3!0.96!21.07!RFX3;;chr2:178128250..178128293,-!p6@NFE2L2!0.96!20.84!NFE2L2;;chr8:67525473..67525518,-!p1@MYBL1!0.96!19.18!MYBL1;;chr4:109089573..109089585,-!p8@LEF1!0.96!8.05!LEF1;;chr16:88752889..88752921,-!p1@SNAI3!0.95!9.23!SNAI3;;chr16:79634624..79634642,-!p1@MAF!0.93!30.78!MAF;;chr7:137620650..137620677,-!p3@CREB3L2!0.93!7.58!CREB3L2;;chr7:50343864..50343888,+!p7@IKZF1!0.93!7.58!IKZF1;;chr8:72756023..72756055,-!p6@MSC!0.92!9.23!MSC;;chr4:109088089..109088101,-!p11@LEF1!0.92!7.34!LEF1;;chr2:231090344..231090361,-!p3@SP110!0.91!7.10!SP110;;chr3:18487057..18487105,-!p4@SATB1!0.91!7.10!SATB1;;chrX:49121165..49121179,-!p1@FOXP3!0.91!7.10!FOXP3;;chr20:56195525..56195556,-!p2@ZBP1!0.91!7.10!ZBP1;;chr12:54694758..54694805,-!p1@NFE2!0.90!8.52!NFE2;;chr7:50348268..50348366,+!p4@IKZF1!0.90!6.87!IKZF1;;chr19:20748574..20748599,-!p1@ZNF737!0.89!43.09!ZNF737;;chr4:185395633..185395651,-!p2@IRF2!0.89!11.13!IRF2;;chr4:81104895..81104920,+!p2@PRDM8!0.88!10.18!PRDM8;;chr16:85932760..85932775,+!p1@IRF8!0.88!6.63!IRF8;;chr7:50344144..5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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000625;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
+|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12184.12206-129D1.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12184.12206-129D1.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12184.12206-129D1.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12184.12206-129D1.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12184.12206-129D1.hg38.nobarcode.ctss.bed.gz
 |id=FF:12206-129D1
-|is_a=EFO:0002091;;FF:0000002;;FF:0000030;;FF:0000210
+|is_a=EFO:0002091;;FF:0000030;;FF:0000210
+|is_obsolete=
+|library_id=CNhs12184!RDhi10018
+|library_id_phase_based=2:CNhs12184
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12206
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12206
 |name=CD8+ T Cells (pluriselect), donor090612, donation2
 |namespace=FANTOM5
@@ Line 42: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs12184,LSID975,release011,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
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 |rna_box=129
 |rna_catalog_number=
@@ Line 57: / Line 79: @@
 |rna_weight_ug=3.60342
 |sample_age=
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.37887632400788e-215!GO:0043227;membrane-bound organelle;3.22629211616115e-190!GO:0043231;intracellular membrane-bound organelle;6.9673612167117e-190!GO:0043226;organelle;6.67622536069754e-175!GO:0043229;intracellular organelle;3.02082950285838e-174!GO:0005737;cytoplasm;1.85824418565284e-132!GO:0044422;organelle part;8.94069702472271e-108!GO:0044446;intracellular organelle part;3.50991299359182e-106!GO:0005634;nucleus;2.79888238860582e-99!GO:0043170;macromolecule metabolic process;1.43068079005581e-95!GO:0044444;cytoplasmic part;2.18308479957055e-92!GO:0032991;macromolecular complex;8.19234663181606e-92!GO:0044237;cellular metabolic process;8.38403621251794e-92!GO:0044238;primary metabolic process;7.25100530184574e-89!GO:0030529;ribonucleoprotein complex;3.3975204488248e-84!GO:0003723;RNA binding;6.1325365586373e-78!GO:0044428;nuclear part;4.16061236447009e-77!GO:0043233;organelle lumen;1.67150534931696e-65!GO:0031974;membrane-enclosed lumen;1.67150534931696e-65!GO:0043283;biopolymer metabolic process;8.65173304314729e-64!GO:0010467;gene expression;6.77692426408963e-61!GO:0005515;protein binding;4.95141950973166e-56!GO:0006396;RNA processing;5.68246632530714e-54!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.51781372900499e-53!GO:0006412;translation;2.8898644851973e-52!GO:0005739;mitochondrion;3.71299291228285e-50!GO:0033036;macromolecule localization;4.37494537913945e-49!GO:0019538;protein metabolic process;1.60533400411211e-48!GO:0015031;protein transport;2.7221511076696e-47!GO:0016071;mRNA metabolic process;1.6345610512636e-46!GO:0031981;nuclear lumen;1.85979211744326e-46!GO:0044267;cellular protein metabolic process;5.98423031113901e-46!GO:0045184;establishment of protein localization;6.47345828979095e-46!GO:0005840;ribosome;1.62607870437673e-45!GO:0044260;cellular macromolecule metabolic process;2.5096604410704e-45!GO:0008104;protein localization;2.95527986217759e-45!GO:0043234;protein complex;3.11287831566081e-44!GO:0008380;RNA splicing;1.40120010372601e-40!GO:0006397;mRNA processing;8.31296312085726e-40!GO:0003676;nucleic acid binding;2.38816093143371e-39!GO:0003735;structural constituent of ribosome;3.30029054605232e-39!GO:0009059;macromolecule biosynthetic process;1.6025297972314e-38!GO:0031090;organelle membrane;5.72264166361701e-37!GO:0044429;mitochondrial part;3.17333367925011e-36!GO:0031967;organelle envelope;1.60960806353267e-35!GO:0031975;envelope;3.55941035883284e-35!GO:0033279;ribosomal subunit;3.09301437623062e-34!GO:0005829;cytosol;4.42220221970548e-34!GO:0016070;RNA metabolic process;1.4461950547547e-32!GO:0046907;intracellular transport;2.76871008540153e-32!GO:0016043;cellular component organization and biogenesis;4.69956091458492e-31!GO:0006886;intracellular protein transport;5.2886017433299e-31!GO:0005681;spliceosome;1.8262966086096e-30!GO:0005654;nucleoplasm;9.50958422593009e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.7054346929072e-29!GO:0044249;cellular biosynthetic process;5.6871789396507e-29!GO:0065003;macromolecular complex assembly;1.73532120006831e-28!GO:0009058;biosynthetic process;3.00686120733208e-28!GO:0006259;DNA metabolic process;3.51028591763313e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.42381023055806e-26!GO:0000166;nucleotide binding;1.43026850324857e-25!GO:0022607;cellular component assembly;4.68309550870646e-25!GO:0044445;cytosolic part;3.897089024063e-24!GO:0051641;cellular localization;5.84276555076424e-24!GO:0051649;establishment of cellular localization;8.3544568716291e-24!GO:0044451;nucleoplasm part;1.2012871848596e-23!GO:0005740;mitochondrial envelope;1.13571067683535e-22!GO:0019866;organelle inner membrane;3.13722078448896e-22!GO:0031966;mitochondrial membrane;7.9014962119444e-22!GO:0006996;organelle organization and biogenesis;1.58404257218118e-21!GO:0012501;programmed cell death;2.69780856885878e-21!GO:0006512;ubiquitin cycle;2.85773354915121e-21!GO:0006915;apoptosis;3.33963300028344e-21!GO:0008219;cell death;2.64369380578291e-20!GO:0016265;death;2.64369380578291e-20!GO:0005743;mitochondrial inner membrane;3.21371132336408e-20!GO:0006119;oxidative phosphorylation;3.21647941384385e-19!GO:0022618;protein-RNA complex assembly;4.00029815362934e-19!GO:0016874;ligase activity;1.59683539719659e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.29309864458392e-18!GO:0044265;cellular macromolecule catabolic process;2.37129107475385e-18!GO:0032553;ribonucleotide binding;2.46404533706943e-18!GO:0032555;purine ribonucleotide binding;2.46404533706943e-18!GO:0016462;pyrophosphatase activity;2.83642275722257e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.88608867183929e-18!GO:0043412;biopolymer modification;4.47605531899998e-18!GO:0015935;small ribosomal subunit;6.27071318273537e-18!GO:0017076;purine nucleotide binding;7.18144789653568e-18!GO:0005730;nucleolus;8.43247620869011e-18!GO:0017111;nucleoside-triphosphatase activity;8.86172435430179e-18!GO:0015934;large ribosomal subunit;3.19000979626286e-17!GO:0016604;nuclear body;3.48503226429324e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;4.44996228266637e-17!GO:0006605;protein targeting;5.75462892020512e-17!GO:0044455;mitochondrial membrane part;6.18788075481612e-17!GO:0019941;modification-dependent protein catabolic process;6.45540502104573e-17!GO:0043632;modification-dependent macromolecule catabolic process;6.45540502104573e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.09557255569063e-16!GO:0044257;cellular protein catabolic process;1.39937523725882e-16!GO:0031980;mitochondrial lumen;1.68696216384768e-16!GO:0005759;mitochondrial matrix;1.68696216384768e-16!GO:0043285;biopolymer catabolic process;4.77214153467003e-16!GO:0043228;non-membrane-bound organelle;4.93763984531341e-16!GO:0043232;intracellular non-membrane-bound organelle;4.93763984531341e-16!GO:0008134;transcription factor binding;6.20273188068971e-16!GO:0006913;nucleocytoplasmic transport;9.51564642871778e-16!GO:0006464;protein modification process;1.00654237953051e-15!GO:0008135;translation factor activity, nucleic acid binding;1.64300789899722e-15!GO:0051169;nuclear transport;1.80064839298401e-15!GO:0050794;regulation of cellular process;2.4789263654515e-15!GO:0006457;protein folding;2.4789263654515e-15!GO:0005524;ATP binding;6.29037495668764e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;6.82988251849223e-15!GO:0000375;RNA splicing, via transesterification reactions;6.82988251849223e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.82988251849223e-15!GO:0000502;proteasome complex (sensu Eukaryota);7.92378048662682e-15!GO:0032559;adenyl ribonucleotide binding;1.56087537374823e-14!GO:0043687;post-translational protein modification;1.86506076593051e-14!GO:0012505;endomembrane system;2.04313348092586e-14!GO:0042981;regulation of apoptosis;3.2241706649278e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;3.50949991506217e-14!GO:0009057;macromolecule catabolic process;3.61240682683897e-14!GO:0005746;mitochondrial respiratory chain;4.20540842818978e-14!GO:0043067;regulation of programmed cell death;4.78632733261836e-14!GO:0030554;adenyl nucleotide binding;5.72620096505081e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.38040380148553e-14!GO:0006974;response to DNA damage stimulus;6.78488637726886e-14!GO:0051276;chromosome organization and biogenesis;7.2632746991342e-14!GO:0005635;nuclear envelope;1.01073540230341e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.27095079197842e-13!GO:0016607;nuclear speck;1.53061956323033e-13!GO:0006323;DNA packaging;1.61188096442963e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.61987469350175e-13!GO:0050136;NADH dehydrogenase (quinone) activity;7.48896193711227e-13!GO:0003954;NADH dehydrogenase activity;7.48896193711227e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.48896193711227e-13!GO:0031965;nuclear membrane;1.23500908083382e-12!GO:0016887;ATPase activity;1.82176618796181e-12!GO:0042623;ATPase activity, coupled;2.08597469465031e-12!GO:0048770;pigment granule;2.26221371652129e-12!GO:0042470;melanosome;2.26221371652129e-12!GO:0044248;cellular catabolic process;2.69494948039301e-12!GO:0006281;DNA repair;4.60816985400188e-12!GO:0030163;protein catabolic process;5.05445052393002e-12!GO:0005761;mitochondrial ribosome;7.53476097260979e-12!GO:0000313;organellar ribosome;7.53476097260979e-12!GO:0019222;regulation of metabolic process;8.09510925591478e-12!GO:0003743;translation initiation factor activity;9.19871296149492e-12!GO:0006413;translational initiation;1.28307466412941e-11!GO:0017038;protein import;1.87592673673243e-11!GO:0005794;Golgi apparatus;2.09330333389757e-11!GO:0048193;Golgi vesicle transport;2.12719471385167e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.13641232469621e-11!GO:0042773;ATP synthesis coupled electron transport;2.13641232469621e-11!GO:0042254;ribosome biogenesis and assembly;2.42688173655579e-11!GO:0004386;helicase activity;3.00513910835455e-11!GO:0016192;vesicle-mediated transport;3.42099694625037e-11!GO:0030964;NADH dehydrogenase complex (quinone);4.34978704000091e-11!GO:0045271;respiratory chain complex I;4.34978704000091e-11!GO:0005747;mitochondrial respiratory chain complex I;4.34978704000091e-11!GO:0007049;cell cycle;4.89959236889003e-11!GO:0008639;small protein conjugating enzyme activity;5.88766407038793e-11!GO:0016568;chromatin modification;8.05092178860756e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;8.49839751904323e-11!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.16705277107665e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.16747260659142e-10!GO:0006446;regulation of translational initiation;1.21500036785918e-10!GO:0004842;ubiquitin-protein ligase activity;1.24132681446718e-10!GO:0044453;nuclear membrane part;1.84089289247767e-10!GO:0051082;unfolded protein binding;3.00421275337384e-10!GO:0050789;regulation of biological process;3.04748972389293e-10!GO:0005694;chromosome;3.29145092699874e-10!GO:0008026;ATP-dependent helicase activity;4.55670466766459e-10!GO:0019787;small conjugating protein ligase activity;5.32089039802347e-10!GO:0031323;regulation of cellular metabolic process;6.51018608930406e-10!GO:0051186;cofactor metabolic process;7.90842142529548e-10!GO:0003712;transcription cofactor activity;8.20632687655195e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.01151964700621e-09!GO:0007243;protein kinase cascade;1.51140233227638e-09!GO:0050657;nucleic acid transport;2.11314629869447e-09!GO:0051236;establishment of RNA localization;2.11314629869447e-09!GO:0050658;RNA transport;2.11314629869447e-09!GO:0006333;chromatin assembly or disassembly;2.28570971448685e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.5100715433237e-09!GO:0019829;cation-transporting ATPase activity;2.71057354638824e-09!GO:0006403;RNA localization;2.74173053432703e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.04336679977232e-09!GO:0005643;nuclear pore;4.29207872262819e-09!GO:0044427;chromosomal part;5.76650936307262e-09!GO:0006793;phosphorus metabolic process;6.21973246037179e-09!GO:0006796;phosphate metabolic process;6.21973246037179e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.39094381607493e-09!GO:0043566;structure-specific DNA binding;6.65469046235844e-09!GO:0008565;protein transporter activity;7.98595790400474e-09!GO:0006350;transcription;1.00145722599455e-08!GO:0005768;endosome;1.44229378858653e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.51830792612612e-08!GO:0051170;nuclear import;1.72291657763179e-08!GO:0065004;protein-DNA complex assembly;1.72354294067243e-08!GO:0051246;regulation of protein metabolic process;1.83079636187634e-08!GO:0010468;regulation of gene expression;1.96839706483034e-08!GO:0009719;response to endogenous stimulus;2.30515510907833e-08!GO:0006399;tRNA metabolic process;2.31122109280347e-08!GO:0009259;ribonucleotide metabolic process;2.44947032340708e-08!GO:0006606;protein import into nucleus;2.78095762633551e-08!GO:0008270;zinc ion binding;2.80715116272398e-08!GO:0016072;rRNA metabolic process;3.28242931420758e-08!GO:0016310;phosphorylation;3.44364867189977e-08!GO:0005839;proteasome core complex (sensu Eukaryota);3.62174623066976e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.35148236079205e-08!GO:0006364;rRNA processing;4.48653529830332e-08!GO:0048523;negative regulation of cellular process;4.51110188691779e-08!GO:0016881;acid-amino acid ligase activity;5.07580880157841e-08!GO:0030532;small nuclear ribonucleoprotein complex;5.51047485679923e-08!GO:0051028;mRNA transport;6.48550202072904e-08!GO:0006164;purine nucleotide biosynthetic process;7.01121087664558e-08!GO:0009260;ribonucleotide biosynthetic process;7.0115097627471e-08!GO:0016787;hydrolase activity;7.20967175861771e-08!GO:0006163;purine nucleotide metabolic process;7.98446021595748e-08!GO:0006732;coenzyme metabolic process;8.13911109554741e-08!GO:0051726;regulation of cell cycle;9.23617317323035e-08!GO:0065002;intracellular protein transport across a membrane;9.23617317323035e-08!GO:0022402;cell cycle process;9.48392078053254e-08!GO:0000785;chromatin;1.04316841253117e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.07741384630767e-07!GO:0000074;regulation of progression through cell cycle;1.15706396493986e-07!GO:0003697;single-stranded DNA binding;1.2442016998372e-07!GO:0009150;purine ribonucleotide metabolic process;1.3159426200009e-07!GO:0004298;threonine endopeptidase activity;1.78914242792491e-07!GO:0009615;response to virus;1.90150472549033e-07!GO:0003713;transcription coactivator activity;2.12632437070658e-07!GO:0006916;anti-apoptosis;2.21031200975132e-07!GO:0000245;spliceosome assembly;2.23235102778483e-07!GO:0009060;aerobic respiration;2.24057176753837e-07!GO:0032446;protein modification by small protein conjugation;2.34742940493776e-07!GO:0015986;ATP synthesis coupled proton transport;2.46251516779211e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.46251516779211e-07!GO:0046930;pore complex;2.99589757557869e-07!GO:0043069;negative regulation of programmed cell death;3.00424941471374e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.0553814162135e-07!GO:0006366;transcription from RNA polymerase II promoter;3.19075308052017e-07!GO:0015078;hydrogen ion transmembrane transporter activity;4.31891812746254e-07!GO:0043066;negative regulation of apoptosis;5.27482092064045e-07!GO:0016567;protein ubiquitination;5.7666349619052e-07!GO:0006917;induction of apoptosis;6.01383578876752e-07!GO:0044432;endoplasmic reticulum part;6.17747575053859e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.484949655268e-07!GO:0065009;regulation of a molecular function;6.52905559114532e-07!GO:0043065;positive regulation of apoptosis;8.83129591907863e-07!GO:0000151;ubiquitin ligase complex;8.98085725408909e-07!GO:0012502;induction of programmed cell death;9.88984958900377e-07!GO:0005783;endoplasmic reticulum;1.01884946816147e-06!GO:0016779;nucleotidyltransferase activity;1.10221296392715e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.24245465543441e-06!GO:0043068;positive regulation of programmed cell death;1.45377764741912e-06!GO:0016563;transcription activator activity;1.60730234082441e-06!GO:0007242;intracellular signaling cascade;1.61601689025447e-06!GO:0065007;biological regulation;1.6550104826918e-06!GO:0006461;protein complex assembly;1.69357936038134e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.74233296676809e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.83524957290324e-06!GO:0009055;electron carrier activity;1.8621108945259e-06!GO:0048519;negative regulation of biological process;1.8621108945259e-06!GO:0006754;ATP biosynthetic process;2.02631271063111e-06!GO:0006753;nucleoside phosphate metabolic process;2.02631271063111e-06!GO:0045333;cellular respiration;2.16865000401064e-06!GO:0009056;catabolic process;2.19838313525105e-06!GO:0006417;regulation of translation;2.42188460167545e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.58487520334451e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.58487520334451e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.58487520334451e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.66084553151766e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.66084553151766e-06!GO:0003724;RNA helicase activity;2.76370907552768e-06!GO:0032774;RNA biosynthetic process;2.81548709335532e-06!GO:0005773;vacuole;3.00241155351637e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.06906110301436e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.06906110301436e-06!GO:0009199;ribonucleoside triphosphate metabolic process;3.09056723352822e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.1240551297286e-06!GO:0006401;RNA catabolic process;3.12915756715318e-06!GO:0031324;negative regulation of cellular metabolic process;3.3752568891768e-06!GO:0051168;nuclear export;3.37817435864208e-06!GO:0006351;transcription, DNA-dependent;3.49470156627691e-06!GO:0046034;ATP metabolic process;3.58245412886476e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.58578175202305e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.58578175202305e-06!GO:0045449;regulation of transcription;3.92260930868295e-06!GO:0005525;GTP binding;3.93909861129728e-06!GO:0009141;nucleoside triphosphate metabolic process;4.03240235883493e-06!GO:0043038;amino acid activation;4.31507977049315e-06!GO:0006418;tRNA aminoacylation for protein translation;4.31507977049315e-06!GO:0043039;tRNA aminoacylation;4.31507977049315e-06!GO:0005793;ER-Golgi intermediate compartment;4.84516186105983e-06!GO:0045259;proton-transporting ATP synthase complex;5.42551397586562e-06!GO:0030120;vesicle coat;6.10162916383846e-06!GO:0030662;coated vesicle membrane;6.10162916383846e-06!GO:0005770;late endosome;6.19312372234341e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.37539073747454e-06!GO:0046914;transition metal ion binding;6.4656146772516e-06!GO:0000323;lytic vacuole;6.64397051101657e-06!GO:0005764;lysosome;6.64397051101657e-06!GO:0016564;transcription repressor activity;7.50787395516807e-06!GO:0019899;enzyme binding;8.25160673384344e-06!GO:0048475;coated membrane;8.46968559664163e-06!GO:0030117;membrane coat;8.46968559664163e-06!GO:0006613;cotranslational protein targeting to membrane;8.58542742672208e-06!GO:0006260;DNA replication;8.59244124686106e-06!GO:0016740;transferase activity;8.60758774430169e-06!GO:0006099;tricarboxylic acid cycle;8.67465523508163e-06!GO:0046356;acetyl-CoA catabolic process;8.67465523508163e-06!GO:0005789;endoplasmic reticulum membrane;9.48508882453136e-06!GO:0031497;chromatin assembly;1.22316091130994e-05!GO:0045786;negative regulation of progression through cell cycle;1.29731111446451e-05!GO:0006334;nucleosome assembly;1.3004307790382e-05!GO:0001772;immunological synapse;1.33152518558964e-05!GO:0051188;cofactor biosynthetic process;1.33478905545079e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.51604683558707e-05!GO:0031326;regulation of cellular biosynthetic process;1.6749791365562e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.80993769161681e-05!GO:0044431;Golgi apparatus part;2.05509607685184e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.12608816292083e-05!GO:0009967;positive regulation of signal transduction;2.56034671506697e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.59569392985313e-05!GO:0015399;primary active transmembrane transporter activity;2.59569392985313e-05!GO:0009892;negative regulation of metabolic process;2.6357506229742e-05!GO:0006084;acetyl-CoA metabolic process;2.64809592877939e-05!GO:0016481;negative regulation of transcription;3.02083529786309e-05!GO:0042110;T cell activation;3.37501971412317e-05!GO:0003924;GTPase activity;4.53985836588571e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.54978385384971e-05!GO:0006402;mRNA catabolic process;4.61138063169702e-05!GO:0008632;apoptotic program;4.73197359319051e-05!GO:0042101;T cell receptor complex;6.11519784089128e-05!GO:0032561;guanyl ribonucleotide binding;6.35869897752264e-05!GO:0019001;guanyl nucleotide binding;6.35869897752264e-05!GO:0006612;protein targeting to membrane;6.36286605397694e-05!GO:0044440;endosomal part;7.15338467083548e-05!GO:0010008;endosome membrane;7.15338467083548e-05!GO:0008186;RNA-dependent ATPase activity;7.58289247877127e-05!GO:0009108;coenzyme biosynthetic process;7.59802157693795e-05!GO:0016363;nuclear matrix;7.76178844813237e-05!GO:0051187;cofactor catabolic process;7.99919184205575e-05!GO:0008234;cysteine-type peptidase activity;8.01396636761878e-05!GO:0046649;lymphocyte activation;8.12997607808608e-05!GO:0006355;regulation of transcription, DNA-dependent;8.12997607808608e-05!GO:0002376;immune system process;8.2991110386263e-05!GO:0009109;coenzyme catabolic process;8.2991110386263e-05!GO:0048522;positive regulation of cellular process;9.15743138109214e-05!GO:0060090;molecular adaptor activity;9.16499498034201e-05!GO:0003690;double-stranded DNA binding;9.43708821773039e-05!GO:0007005;mitochondrion organization and biogenesis;9.75570918666035e-05!GO:0009889;regulation of biosynthetic process;0.000105458285435002!GO:0043623;cellular protein complex assembly;0.000114922291886819!GO:0007264;small GTPase mediated signal transduction;0.000127645631279105!GO:0000278;mitotic cell cycle;0.000130043683804139!GO:0005813;centrosome;0.000156865307313532!GO:0004674;protein serine/threonine kinase activity;0.000176614406920489!GO:0005885;Arp2/3 protein complex;0.000186243064409543!GO:0003677;DNA binding;0.000193146499933897!GO:0003729;mRNA binding;0.000203864502548835!GO:0045321;leukocyte activation;0.00022353522773493!GO:0004004;ATP-dependent RNA helicase activity;0.000239987691279449!GO:0006752;group transfer coenzyme metabolic process;0.000252527858575485!GO:0005762;mitochondrial large ribosomal subunit;0.000258617873834059!GO:0000315;organellar large ribosomal subunit;0.000258617873834059!GO:0043492;ATPase activity, coupled to movement of substances;0.000275787829449362!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000304492906751537!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00032705556498067!GO:0000139;Golgi membrane;0.000337649278654924!GO:0008047;enzyme activator activity;0.000366516048670907!GO:0006891;intra-Golgi vesicle-mediated transport;0.00036820231540331!GO:0009117;nucleotide metabolic process;0.000421423449201034!GO:0003899;DNA-directed RNA polymerase activity;0.000426959617545918!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000428725807738013!GO:0051427;hormone receptor binding;0.000451444237556025!GO:0005798;Golgi-associated vesicle;0.000462768163410574!GO:0043021;ribonucleoprotein binding;0.000476306913483648!GO:0006310;DNA recombination;0.000478090673630247!GO:0008654;phospholipid biosynthetic process;0.000486498034790658!GO:0005774;vacuolar membrane;0.00051114841829942!GO:0005815;microtubule organizing center;0.000541703968961568!GO:0050790;regulation of catalytic activity;0.000559436680787008!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000639586254788109!GO:0030384;phosphoinositide metabolic process;0.000653375024720769!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000653638023982479!GO:0007265;Ras protein signal transduction;0.00066543390340532!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000692701646693339!GO:0031902;late endosome membrane;0.000799045134201858!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000868655083811068!GO:0035257;nuclear hormone receptor binding;0.000875104889438559!GO:0016251;general RNA polymerase II transcription factor activity;0.000910829958375852!GO:0048518;positive regulation of biological process;0.000979461796347339!GO:0005765;lysosomal membrane;0.00102117574061171!GO:0043681;protein import into mitochondrion;0.00104712269094819!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00107441232684947!GO:0031252;leading edge;0.0010827921057965!GO:0015992;proton transport;0.00113854228790419!GO:0006818;hydrogen transport;0.00119788273763775!GO:0030695;GTPase regulator activity;0.00120292409573655!GO:0000314;organellar small ribosomal subunit;0.00124424092487284!GO:0005763;mitochondrial small ribosomal subunit;0.00124424092487284!GO:0004518;nuclease activity;0.0012500458158519!GO:0016197;endosome transport;0.00125435231295593!GO:0031072;heat shock protein binding;0.00137411024279804!GO:0005667;transcription factor complex;0.00139722838679228!GO:0005070;SH3/SH2 adaptor activity;0.00140094977506021!GO:0044437;vacuolar part;0.00144477608362285!GO:0005769;early endosome;0.00149228397506738!GO:0006611;protein export from nucleus;0.00150455587757357!GO:0006352;transcription initiation;0.00161522238293939!GO:0032940;secretion by cell;0.00185251726488136!GO:0048500;signal recognition particle;0.00189813404654058!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00192238925794117!GO:0003714;transcription corepressor activity;0.00192497641143937!GO:0008033;tRNA processing;0.00193738232219792!GO:0006383;transcription from RNA polymerase III promoter;0.00195327480802905!GO:0003725;double-stranded RNA binding;0.00198947905182179!GO:0009966;regulation of signal transduction;0.00202346976638693!GO:0007034;vacuolar transport;0.00202881687314129!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00206012050631259!GO:0051252;regulation of RNA metabolic process;0.0021659981009458!GO:0022415;viral reproductive process;0.00220546656714177!GO:0046489;phosphoinositide biosynthetic process;0.00241867516431611!GO:0045892;negative regulation of transcription, DNA-dependent;0.00252899665502423!GO:0051087;chaperone binding;0.00254911561406475!GO:0016859;cis-trans isomerase activity;0.00257924241730832!GO:0006650;glycerophospholipid metabolic process;0.00259912271612724!GO:0047485;protein N-terminus binding;0.00260971371321854!GO:0002757;immune response-activating signal transduction;0.0026253719915646!GO:0006261;DNA-dependent DNA replication;0.00268448579157414!GO:0051251;positive regulation of lymphocyte activation;0.00269785877288749!GO:0051090;regulation of transcription factor activity;0.00270420688572039!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00279235363529228!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00279235363529228!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00279235363529228!GO:0043488;regulation of mRNA stability;0.00297375747465265!GO:0043487;regulation of RNA stability;0.00297375747465265!GO:0000786;nucleosome;0.00297929114534883!GO:0019867;outer membrane;0.00300191151523327!GO:0006955;immune response;0.00301246211899573!GO:0005741;mitochondrial outer membrane;0.00301246211899573!GO:0003746;translation elongation factor activity;0.00319226253532294!GO:0051336;regulation of hydrolase activity;0.00321356520835918!GO:0000087;M phase of mitotic cell cycle;0.00324061985717185!GO:0030658;transport vesicle membrane;0.003551978454162!GO:0031968;organelle outer membrane;0.0035584437878732!GO:0006414;translational elongation;0.0035584437878732!GO:0032259;methylation;0.00357642380521027!GO:0044452;nucleolar part;0.00363126784088815!GO:0005083;small GTPase regulator activity;0.00368215953829113!GO:0022890;inorganic cation transmembrane transporter activity;0.003693913991048!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00382814095735328!GO:0006405;RNA export from nucleus;0.0039166539830913!GO:0045045;secretory pathway;0.00397897881552349!GO:0005684;U2-dependent spliceosome;0.00398146515822032!GO:0006338;chromatin remodeling;0.00410181426935774!GO:0051092;activation of NF-kappaB transcription factor;0.0041383649820194!GO:0004527;exonuclease activity;0.00416377253076281!GO:0006607;NLS-bearing substrate import into nucleus;0.00418065859256409!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00418137734845809!GO:0045047;protein targeting to ER;0.00418137734845809!GO:0003711;transcription elongation regulator activity;0.0041902812334411!GO:0031982;vesicle;0.00462202193865975!GO:0008312;7S RNA binding;0.00475288348064767!GO:0043414;biopolymer methylation;0.00493087278836096!GO:0003678;DNA helicase activity;0.00493972281568464!GO:0005637;nuclear inner membrane;0.00496000094785497!GO:0030118;clathrin coat;0.00496000094785497!GO:0007067;mitosis;0.00497355907510107!GO:0002764;immune response-regulating signal transduction;0.00536308484187114!GO:0008624;induction of apoptosis by extracellular signals;0.00549272578145229!GO:0016584;nucleosome positioning;0.00555264894399152!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00558556856368577!GO:0006950;response to stress;0.00558821108030226!GO:0015631;tubulin binding;0.00570477657530791!GO:0019783;small conjugating protein-specific protease activity;0.00577148950356308!GO:0001775;cell activation;0.00589941088635907!GO:0005096;GTPase activator activity;0.00593738745033!GO:0048471;perinuclear region of cytoplasm;0.00599183231331395!GO:0004843;ubiquitin-specific protease activity;0.00602875032916607!GO:0051301;cell division;0.00621546131511758!GO:0046474;glycerophospholipid biosynthetic process;0.00621986908405558!GO:0046966;thyroid hormone receptor binding;0.00623930673824653!GO:0051539;4 iron, 4 sulfur cluster binding;0.00633804158342624!GO:0042287;MHC protein binding;0.00657507713179679!GO:0000049;tRNA binding;0.00663556048265951!GO:0016605;PML body;0.00664954994393249!GO:0006289;nucleotide-excision repair;0.00695055472886466!GO:0046822;regulation of nucleocytoplasmic transport;0.00727248050241277!GO:0042802;identical protein binding;0.00768589552599317!GO:0051098;regulation of binding;0.00782109942963832!GO:0007006;mitochondrial membrane organization and biogenesis;0.00791638563602618!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0079186292095432!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0079186292095432!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00802349002373324!GO:0008168;methyltransferase activity;0.00819036030254961!GO:0007050;cell cycle arrest;0.00829470967914148!GO:0031988;membrane-bound vesicle;0.00831878908195179!GO:0032200;telomere organization and biogenesis;0.00838695491173089!GO:0000723;telomere maintenance;0.00838695491173089!GO:0051249;regulation of lymphocyte activation;0.00851685435349784!GO:0006376;mRNA splice site selection;0.0086517665646851!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0086517665646851!GO:0005669;transcription factor TFIID complex;0.00871230040354042!GO:0050865;regulation of cell activation;0.00889838594402922!GO:0030660;Golgi-associated vesicle membrane;0.00889838594402922!GO:0000209;protein polyubiquitination;0.0089260457742749!GO:0022403;cell cycle phase;0.00904653430772251!GO:0001819;positive regulation of cytokine production;0.00926465236529277!GO:0050863;regulation of T cell activation;0.00926970769276651!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00928610212007747!GO:0033116;ER-Golgi intermediate compartment membrane;0.00979766769468419!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0100046053933992!GO:0016853;isomerase activity;0.0101608499378864!GO:0043087;regulation of GTPase activity;0.0102903391585987!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0103096589149814!GO:0051920;peroxiredoxin activity;0.0103096589149814!GO:0016741;transferase activity, transferring one-carbon groups;0.0109064723492862!GO:0004532;exoribonuclease activity;0.0113312331753847!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0113312331753847!GO:0051789;response to protein stimulus;0.0113556703759919!GO:0006986;response to unfolded protein;0.0113556703759919!GO:0004221;ubiquitin thiolesterase activity;0.0116052081185691!GO:0031625;ubiquitin protein ligase binding;0.011765685287901!GO:0048468;cell development;0.0117824692225365!GO:0004197;cysteine-type endopeptidase activity;0.0119003807310534!GO:0031410;cytoplasmic vesicle;0.0120448074095768!GO:0030518;steroid hormone receptor signaling pathway;0.0121581518624397!GO:0030663;COPI coated vesicle membrane;0.0121703897334901!GO:0030126;COPI vesicle coat;0.0121703897334901!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0121703897334901!GO:0015002;heme-copper terminal oxidase activity;0.0121703897334901!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0121703897334901!GO:0004129;cytochrome-c oxidase activity;0.0121703897334901!GO:0022411;cellular component disassembly;0.0126977578261569!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0129687010865418!GO:0051540;metal cluster binding;0.0134397276253377!GO:0051536;iron-sulfur cluster binding;0.0134397276253377!GO:0008097;5S rRNA binding;0.0136516094540548!GO:0048487;beta-tubulin binding;0.013682666246224!GO:0008017;microtubule binding;0.0138535264260281!GO:0040029;regulation of gene expression, epigenetic;0.0140405808724527!GO:0008408;3'-5' exonuclease activity;0.0141642423272848!GO:0009165;nucleotide biosynthetic process;0.0141936709699002!GO:0006626;protein targeting to mitochondrion;0.0144053063463589!GO:0030137;COPI-coated vesicle;0.0149798313229185!GO:0018193;peptidyl-amino acid modification;0.0149933902715986!GO:0007041;lysosomal transport;0.0155985357881918!GO:0015630;microtubule cytoskeleton;0.0156417013441057!GO:0050870;positive regulation of T cell activation;0.0156591225126104!GO:0006497;protein amino acid lipidation;0.0157179868711157!GO:0045454;cell redox homeostasis;0.0157866036663792!GO:0005869;dynactin complex;0.0160880560463217!GO:0016023;cytoplasmic membrane-bound vesicle;0.0169242250531221!GO:0016301;kinase activity;0.0169936710358198!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0171228699369735!GO:0009112;nucleobase metabolic process;0.0171988383550662!GO:0000059;protein import into nucleus, docking;0.0178712658581579!GO:0015980;energy derivation by oxidation of organic compounds;0.018425929304445!GO:0016585;chromatin remodeling complex;0.0185426978465628!GO:0003682;chromatin binding;0.0186389227038641!GO:0016272;prefoldin complex;0.0187034999360769!GO:0000781;chromosome, telomeric region;0.0187802048305268!GO:0019079;viral genome replication;0.019496441309802!GO:0005657;replication fork;0.0195881264593992!GO:0005048;signal sequence binding;0.0202881432583853!GO:0009116;nucleoside metabolic process;0.0204162683519522!GO:0015923;mannosidase activity;0.0204872485239929!GO:0006839;mitochondrial transport;0.0207042190357416!GO:0050811;GABA receptor binding;0.0216980006407093!GO:0022406;membrane docking;0.0219026418302044!GO:0048278;vesicle docking;0.0219026418302044!GO:0030880;RNA polymerase complex;0.0219026418302044!GO:0006302;double-strand break repair;0.0219026418302044!GO:0050852;T cell receptor signaling pathway;0.0219175905783168!GO:0030521;androgen receptor signaling pathway;0.0220046701496709!GO:0030125;clathrin vesicle coat;0.0220103921089817!GO:0030665;clathrin coated vesicle membrane;0.0220103921089817!GO:0048002;antigen processing and presentation of peptide antigen;0.022333370721405!GO:0000118;histone deacetylase complex;0.0223477345449116!GO:0005521;lamin binding;0.0228934436610815!GO:0006506;GPI anchor biosynthetic process;0.0235808828815346!GO:0046467;membrane lipid biosynthetic process;0.0237133245954523!GO:0045058;T cell selection;0.0238244516928417!GO:0019058;viral infectious cycle;0.0242779769879449!GO:0001784;phosphotyrosine binding;0.024432228809553!GO:0019843;rRNA binding;0.0244880581589258!GO:0051223;regulation of protein transport;0.0246489278776109!GO:0016044;membrane organization and biogenesis;0.0246778870003375!GO:0050851;antigen receptor-mediated signaling pathway;0.0246957623056893!GO:0031124;mRNA 3'-end processing;0.0253001225649629!GO:0044438;microbody part;0.025440896050199!GO:0044439;peroxisomal part;0.025440896050199!GO:0016505;apoptotic protease activator activity;0.0256460756425707!GO:0006904;vesicle docking during exocytosis;0.0257643862459121!GO:0042393;histone binding;0.0259993270577479!GO:0003684;damaged DNA binding;0.0262979470647215!GO:0009607;response to biotic stimulus;0.0263898329106982!GO:0030867;rough endoplasmic reticulum membrane;0.026394712380018!GO:0043022;ribosome binding;0.0270178994850079!GO:0030119;AP-type membrane coat adaptor complex;0.0270178994850079!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0270235907179438!GO:0043621;protein self-association;0.0270235907179438!GO:0001726;ruffle;0.0272868631879414!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0273004414489967!GO:0051091;positive regulation of transcription factor activity;0.0282255293258102!GO:0008180;signalosome;0.028348806538106!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0285313981606589!GO:0006505;GPI anchor metabolic process;0.0288174614560026!GO:0030258;lipid modification;0.0288174614560026!GO:0000738;DNA catabolic process, exonucleolytic;0.0294896858902452!GO:0045309;protein phosphorylated amino acid binding;0.0296961857590256!GO:0000178;exosome (RNase complex);0.0297359812214722!GO:0030132;clathrin coat of coated pit;0.0298954839644815!GO:0019904;protein domain specific binding;0.0300141554680106!GO:0006919;caspase activation;0.0300176505604567!GO:0008139;nuclear localization sequence binding;0.0302631972884653!GO:0019883;antigen processing and presentation of endogenous antigen;0.0304508982789602!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0307192068612558!GO:0004003;ATP-dependent DNA helicase activity;0.0312833632589166!GO:0046979;TAP2 binding;0.031726499925374!GO:0046977;TAP binding;0.031726499925374!GO:0046978;TAP1 binding;0.031726499925374!GO:0042608;T cell receptor binding;0.0320980268038362!GO:0004722;protein serine/threonine phosphatase activity;0.0321018538849099!GO:0016790;thiolester hydrolase activity;0.0323016312967541!GO:0000287;magnesium ion binding;0.0323016312967541!GO:0007004;telomere maintenance via telomerase;0.0323016312967541!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0323016312967541!GO:0031123;RNA 3'-end processing;0.0324619402087836!GO:0000119;mediator complex;0.0328331922880696!GO:0051219;phosphoprotein binding;0.0330530021717151!GO:0005832;chaperonin-containing T-complex;0.0330530021717151!GO:0043281;regulation of caspase activity;0.0330601784048327!GO:0030131;clathrin adaptor complex;0.0334125625155945!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0337983525426633!GO:0000303;response to superoxide;0.0340859315046874!GO:0004540;ribonuclease activity;0.0345922250829031!GO:0004576;oligosaccharyl transferase activity;0.0346271867976662!GO:0030522;intracellular receptor-mediated signaling pathway;0.0367221308889824!GO:0032318;regulation of Ras GTPase activity;0.0374267850537073!GO:0031903;microbody membrane;0.0377633961773999!GO:0005778;peroxisomal membrane;0.0377633961773999!GO:0008250;oligosaccharyl transferase complex;0.0378264427947981!GO:0005095;GTPase inhibitor activity;0.0387129663078937!GO:0000090;mitotic anaphase;0.0389430065177035!GO:0051322;anaphase;0.0389430065177035!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.0390474794297941!GO:0008287;protein serine/threonine phosphatase complex;0.0390973549848917!GO:0017134;fibroblast growth factor binding;0.0391663987578611!GO:0005057;receptor signaling protein activity;0.0394183915976901!GO:0007259;JAK-STAT cascade;0.0394183915976901!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0398195542771514!GO:0000428;DNA-directed RNA polymerase complex;0.0398195542771514!GO:0000776;kinetochore;0.0401444921860147!GO:0002378;immunoglobulin biosynthetic process;0.0401444921860147!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0401444921860147!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0401444921860147!GO:0030176;integral to endoplasmic reticulum membrane;0.040980276776187!GO:0006595;polyamine metabolic process;0.0413092316022183!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0413092316022183!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0413092316022183!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0427274240662863!GO:0032984;macromolecular complex disassembly;0.0430802048397703!GO:0006213;pyrimidine nucleoside metabolic process;0.0430802048397703!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0432790074608721!GO:0042158;lipoprotein biosynthetic process;0.043355275858445!GO:0006284;base-excision repair;0.0444603466262868!GO:0030127;COPII vesicle coat;0.0453614946839853!GO:0012507;ER to Golgi transport vesicle membrane;0.0453614946839853!GO:0005784;translocon complex;0.0457743702447498!GO:0016788;hydrolase activity, acting on ester bonds;0.0461669862120938!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0466442690473757!GO:0006378;mRNA polyadenylation;0.047283496257466!GO:0002440;production of molecular mediator of immune response;0.0474586855739!GO:0008094;DNA-dependent ATPase activity;0.0477602396555263!GO:0006406;mRNA export from nucleus;0.0479209015898069!GO:0030134;ER to Golgi transport vesicle;0.0489655114237172!GO:0008637;apoptotic mitochondrial changes;0.048966789257719!GO:0032981;mitochondrial respiratory chain complex I assembly;0.048966789257719!GO:0010257;NADH dehydrogenase complex assembly;0.048966789257719!GO:0033108;mitochondrial respiratory chain complex assembly;0.048966789257719!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0489968673860077!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0489968673860077!GO:0008538;proteasome activator activity;0.049130356315596
 |sample_id=12206
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=blood
 |top_motifs=ELF1,2,4:2.55826061884;RUNX1..3:2.26464567158;ETS1,2:2.10270691616;CDX1,2,4:1.94502362637;T:1.90361827871;PAX3,7:1.87816910354;PDX1:1.87761538408;STAT1,3:1.77530684783;SPI1:1.75157093405;FOX{D1,D2}:1.56795480577;DMAP1_NCOR{1,2}_SMARC:1.51983332109;CRX:1.4899823675;IRF1,2:1.47702201281;RORA:1.43350591514;FOXO1,3,4:1.40476907334;SPIB:1.36263784748;TLX2:1.347131566;FOX{F1,F2,J1}:1.22241804004;ELK1,4_GABP{A,B1}:1.16182108422;BPTF:1.08089551585;IKZF2:1.06091179035;NANOG{mouse}:1.03950238621;HMX1:1.03716589971;IRF7:0.985349758836;TGIF1:0.932837210364;GATA6:0.861120791253;YY1:0.857341078999;NKX2-2,8:0.85678978669;FOXA2:0.822690642711;LEF1_TCF7_TCF7L1,2:0.791991946722;PBX1:0.77387482341;MYOD1:0.715271501233;NKX6-1,2:0.677743818845;BREu{core}:0.604765434258;FOX{I1,J2}:0.602479864412;PAX6:0.587289308784;EP300:0.561830375372;CREB1:0.508823303222;ZBTB16:0.461556521934;ZEB1:0.377064338737;CUX2:0.376603344572;FOXP3:0.376459485703;SPZ1:0.373393468602;RFX2..5_RFXANK_RFXAP:0.340536906643;PAX4:0.331260567313;ATF5_CREB3:0.32415977578;FOXN1:0.321163913731;SOX5:0.319900257813;SNAI1..3:0.287912415017;ALX1:0.279858090325;FOXD3:0.271951029831;POU1F1:0.263261029273;NFIX:0.260229832728;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.227766779336;FOXP1:0.216209634371;NRF1:0.215763896448;NFATC1..3:0.197535882804;PAX2:0.1934579055;SREBF1,2:0.179934816343;NKX2-1,4:0.163772752377;NFKB1_REL_RELA:0.161321294342;STAT5{A,B}:0.145491712212;RBPJ:0.142048121505;STAT2,4,6:0.0889218372336;POU2F1..3:0.0741276468769;NFIL3:0.0700990975287;ZNF143:0.0620802553001;NR1H4:0.0538828094238;ZNF148:0.0511615013658;SOX2:0.048504584935;ATF2:0.048091175455;LMO2:0.0235378398979;TAL1_TCF{3,4,12}:-0.0134149591876;HOX{A6,A7,B6,B7}:-0.0144979086812;AR:-0.026899952346;VSX1,2:-0.0279952907792;MYB:-0.0447288502894;HES1:-0.0591304348062;OCT4_SOX2{dimer}:-0.068625542096;PRRX1,2:-0.0752701071837;ADNP_IRX_SIX_ZHX:-0.0775372672133;CEBPA,B_DDIT3:-0.080387334501;NKX3-1:-0.0978398526816;TBX4,5:-0.115044341239;POU5F1:-0.141184718535;NR5A1,2:-0.144873686284;TFAP4:-0.175521893935;RXRA_VDR{dimer}:-0.185563724498;HLF:-0.205756859576;FOXQ1:-0.216086434907;FOXM1:-0.225617366133;MYFfamily:-0.256284314674;DBP:-0.267424589696;GCM1,2:-0.279128713338;NANOG:-0.288376783142;NFY{A,B,C}:-0.291560399361;HMGA1,2:-0.293912807178;JUN:-0.299779315437;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.300317199331;ESR1:-0.303519136229;AHR_ARNT_ARNT2:-0.314017972137;TFCP2:-0.314558993295;HAND1,2:-0.329702657799;NFE2L1:-0.329891097296;RREB1:-0.331445697444;ARID5B:-0.333604145007;HNF4A_NR2F1,2:-0.341602943696;GLI1..3:-0.342742780006;HNF1A:-0.357465197427;HBP1_HMGB_SSRP1_UBTF:-0.360951276991;E2F1..5:-0.369602893528;NFE2L2:-0.370771901515;FOSL2:-0.374883096795;ZNF423:-0.378302931628;MTF1:-0.378560959914;AIRE:-0.384093889024;MZF1:-0.411017838872;MAFB:-0.4131555707;ALX4:-0.454792677045;NR3C1:-0.456391056151;ATF4:-0.483115398937;BACH2:-0.49325533529;EVI1:-0.555404804965;RFX1:-0.56247810974;NHLH1,2:-0.568703852065;GFI1:-0.568908600611;FOS_FOS{B,L1}_JUN{B,D}:-0.570343986341;HIF1A:-0.580830212625;GATA4:-0.60791932758;ZNF238:-0.616715619728;ATF6:-0.62850807687;ZNF384:-0.631065369965;NFE2:-0.638649872159;EGR1..3:-0.639548505565;REST:-0.650870277546;PPARG:-0.684798286146;PITX1..3:-0.689268932533;SMAD1..7,9:-0.692312001192;SRF:-0.7030331634;ZFP161:-0.728025239417;NKX2-3_NKX2-5:-0.758970840136;MAZ:-0.784039329168;PAX5:-0.798751774375;PRDM1:-0.809827077334;PATZ1:-0.816681873104;MEF2{A,B,C,D}:-0.82927171212;NR6A1:-0.870680654736;MTE{core}:-0.909464268014;MED-1{core}:-0.92416420281;TP53:-0.924246395831;TOPORS:-0.925058024104;ZBTB6:-0.945941016768;LHX3,4:-0.956925452689;KLF4:-0.97522764519;ONECUT1,2:-0.989001120972;GFI1B:-1.02676648181;HOX{A4,D4}:-1.06583372498;HOXA9_MEIS1:-1.09443544881;SOX{8,9,10}:-1.09626317751;bHLH_family:-1.09815136043;HSF1,2:-1.10114853017;GTF2I:-1.1051520855;NKX3-2:-1.12129193222;XCPE1{core}:-1.12609161097;MYBL2:-1.13510884193;GZF1:-1.14076605003;EN1,2:-1.14858968372;PAX8:-1.20013322302;CDC5L:-1.28656829148;UFEwm:-1.29731383455;TFAP2B:-1.29747114296;RXR{A,B,G}:-1.31543376898;XBP1:-1.31923682028;TEF:-1.32153523746;SP1:-1.3307239453;SOX17:-1.37103924305;HIC1:-1.37705496067;TLX1..3_NFIC{dimer}:-1.39330765311;EBF1:-1.42645980608;TBP:-1.43648850792;GTF2A1,2:-1.488345612;TFDP1:-1.51769587458;POU6F1:-1.51874835923;HOX{A5,B5}:-1.55949696024;FOXL1:-1.5605468553;TFAP2{A,C}:-1.61417841238;ZIC1..3:-1.6510933289;ESRRA:-1.6852737764;TEAD1:-1.73562000057;POU3F1..4:-1.83507449209;IKZF1:-2.2867958352;PAX1,9:-2.29433812416
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12206-129D1;search_select_hide=table117:FF:12206-129D1
 }}

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FF:12206-129D1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:34, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0