FFCP PHASE1:Hg19::chr19:52005009..52005060,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:52005009..52005060,-
|short_description=p1@SIGLEC12
|description=CAGE_peak_1_at_SIGLEC12_5end
|association_with_transcript=0bp_to_ENST00000291707,NM_05300...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89858 | |EntrezGene=89858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15482 | |HGNC=15482 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PQ1 | |UniProt=Q96PQ1 | ||
|association_with_transcript=0bp_to_ENST00000291707,NM_053003,uc002pwx.1,uc010eoy.1_5end | |||
|cluster_id=chr19:52005009..52005060,- | |||
|description=CAGE_peak_1_at_SIGLEC12_5end | |||
|id=chr19:52005009..52005060,- | |||
|ontology_enrichment_celltype=CL:0000763!2.67e-58!112;CL:0000049!2.67e-58!112;CL:0000839!8.95e-45!70;CL:0000557!2.36e-40!71;CL:0000037!2.34e-39!172;CL:0000566!2.34e-39!172;CL:0000766!5.13e-38!76;CL:0002057!1.04e-37!42;CL:0002032!1.36e-37!165;CL:0000837!1.36e-37!165;CL:0002194!1.90e-37!63;CL:0000576!1.90e-37!63;CL:0000040!1.90e-37!63;CL:0000559!1.90e-37!63;CL:0002009!8.69e-36!65;CL:0000988!1.25e-35!182;CL:0000860!2.87e-34!45;CL:0002031!6.49e-23!124;CL:0002087!4.60e-20!119;CL:0000738!8.46e-20!140;CL:0002274!3.63e-07!5;CL:0000457!3.63e-07!5;CL:0002191!3.63e-07!5;CL:0000097!3.63e-07!5;CL:0000831!3.63e-07!5;CL:0002028!3.63e-07!5;CL:0000134!8.01e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.47e-49;33!CL:0002057;4.47e-49;33!CL:0000473;1.23e-35;39!CL:0000234;1.23e-35;39!CL:0000576;2.84e-33;48!CL:0000763;1.48e-29;100!CL:0000766;1.51e-20;69!CL:0000097;6.97e-11;5!CL:0002087;2.37e-09;104!CL:0000988;3.14e-09;177!CL:0000738;1.01e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.24e-71,108;CL:0000049,3.24e-71,108;CL:0000839,2.67e-50,66;CL:0000557,2.24e-49,67;CL:0000860,3.14e-46,42;CL:0002057,3.14e-46,42;CL:0002032,1.38e-45,161;CL:0000837,1.38e-45,161;CL:0000766,3.90e-45,72;CL:0000037,1.52e-44,168;CL:0002194,1.01e-43,59;CL:0000576,1.01e-43,59;CL:0000040,1.01e-43,59;CL:0000559,1.01e-43,59;CL:0000473,4.40e-42,48;CL:0000234,4.40e-42,48;CL:0002009,5.98e-42,61;CL:0000988,2.11e-41,177;CL:0002031,4.27e-25,120;CL:0000738,6.72e-22,136;CL:0002087,4.78e-21,115;CL:0000134,2.83e-12,354;CL:0002320,1.01e-11,361;CL:0000097,6.26e-11,5;CL:0002028,6.26e-11,5;CL:0000219,8.42e-10,386;CL:0000034,1.03e-07,441;CL:0000048,1.69e-07,427;CL:0000723,3.47e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-34;42!CL:0000049;4.71e-21;108 | |||
|ontology_enrichment_disease=DOID:8692!4.21e-26!31;DOID:1240!2.59e-22!39;DOID:2531!8.92e-15!51;DOID:0060083!8.92e-15!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.56e-36;31!DOID:1240;2.56e-25;39!DOID:2531;1.94e-15;51!DOID:0060083;1.94e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.78e-38,31;DOID:1240,3.74e-34,39;DOID:2531,2.80e-24,51;DOID:0060083,2.80e-24,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.02e-40!102;UBERON:0003061!5.02e-40!102;UBERON:0002193!2.53e-37!112;UBERON:0002371!3.70e-35!80;UBERON:0001474!1.96e-31!86;UBERON:0002405!5.35e-31!115;UBERON:0004765!4.04e-24!101;UBERON:0001434!4.04e-24!101;UBERON:0003081!1.41e-11!216;UBERON:0007023!2.09e-09!115;UBERON:0002204!2.37e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.30e-07;5!UBERON:0005057;1.30e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,4.22e-46,93;UBERON:0002390,4.54e-45,98;UBERON:0003061,4.54e-45,98;UBERON:0002193,2.61e-43,108;UBERON:0002371,3.84e-42,76;UBERON:0001474,3.37e-38,82;UBERON:0004765,9.31e-34,90;UBERON:0001434,3.29e-29,100;UBERON:0003081,1.08e-15,203;UBERON:0002204,5.77e-13,167;UBERON:0002384,5.63e-11,371;UBERON:0004177,8.00e-08,7;UBERON:0005057,8.00e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,1.80490002723128,0.651032612147555,0.671746422719773,1.6194683300949,13.9090806522461,11.4864608635856,12.0920301980419,1.94067248950253,10.9241647345672,6.16751832032739,0.619412741790207,95.2261818586318,50.2074984797037,35.945298943065,6.89491361473237,5.80936215225443,0,13.1769637679823,16.6472751535286,3.37085226667627,18.977201326996,14.4418062184242,3.19668562899521,82.1329737464923,56.8471424221651,32.8193057910174,5.80418477257168,7.94339314567596,1.86846674698672,55.2747063564835,44.3260480657171,29.5376828798959,4.84319602106695,9.20694089968912,1.89877432464531,0.845021145247767,0,1.04829322754188,1.12328631146495,0.300353785683013,0.32145117339416,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,2.37045676297569,0,0,0,0.83593247695339,0,0,0,0,0,0,0,0.25618263945135,0.780356085359269,0,0.829050053357545,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.696518949197069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,4.7561971932393,0,0,0,0,0,0,6.89728533054321,2.90559832243646,1.4512968087854,4.32359860250884,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68127715990291,0.197030760201927,0,0,0,0,0,0.502548796003046,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0.714695326373367,1.64544909234478,0,0,0.79312517629427,0,0,0,0,0,0,0,15.3676116003269,31.5983860718405,86.1511481686203,14.2833653720804,49.9818977041957,0,3.44695770700651,30.0761372508081,1.69291777801603,2.56940920165919,1.21079824314629,10.2203097045678,20.6103206853459,3.07240764308458,3.13146551049382,3.33698283423817,22.2742428758326,0,7.38524393686274,24.3410110628385,0,0,0,0.146508179271894,0,3.12041475976939,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,20.4628948090749,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.957003479195758,0,0,0,80.2169110178577,1.99454018280188,1.35357396370308,0.784250137270958,0.503464760927528,0,93.1368352825019,0,0,0,0,0.995261931078505,0.973033209536731,1.22206028986725,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,1.20990716048664,0.91821828489147,7.77194929430402,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.786818822024972,0,0,0,0.714695326373367,0,0,0,0,0,0,169.685240388884,0,0.906496732161005,7.18105945022604,5.30027555648885,0,0,0,0,4.27149650270779,1.10043013569766,0,1.9846640872478,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5769925353446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.156986185701028,0.785577949580009,0,1.82631744101899,0.215927591218621,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.308696632431779,4.5897507705831,0,0,0,0,0,0,0,17.8569444161722,21.5933924711484,0,0,0,0,0,0.917458566809082,0,0,0.135982980381829,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0.852935927603924,0,1.16260037704811,2.42091385753846,0,0.12729431655633,0.202117188958219,0.870866991587845,0,1.34704106029175,1.64961072403156,0.332660356546013,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0.201273793591026,0 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| ||
|short_description=p1@SIGLEC12 | |||
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Latest revision as of 15:07, 19 September 2015
Short description: | p1@SIGLEC12 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIGLEC12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000291707, NM_053003, uc002pwx.1, uc010eoy.1_5end |
EntrezGene: | SIGLEC12 |
HGNC: | 15482 |
UniProt: | Q96PQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.24e-71 | 108 |
common myeloid progenitor | 3.24e-71 | 108 |
myeloid lineage restricted progenitor cell | 2.67e-50 | 66 |
granulocyte monocyte progenitor cell | 2.24e-49 | 67 |
classical monocyte | 3.14e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.14e-46 | 42 |
hematopoietic oligopotent progenitor cell | 1.38e-45 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-45 | 161 |
myeloid leukocyte | 3.90e-45 | 72 |
hematopoietic stem cell | 1.52e-44 | 168 |
monopoietic cell | 1.01e-43 | 59 |
monocyte | 1.01e-43 | 59 |
monoblast | 1.01e-43 | 59 |
promonocyte | 1.01e-43 | 59 |
defensive cell | 4.40e-42 | 48 |
phagocyte | 4.40e-42 | 48 |
macrophage dendritic cell progenitor | 5.98e-42 | 61 |
hematopoietic cell | 2.11e-41 | 177 |
hematopoietic lineage restricted progenitor cell | 4.27e-25 | 120 |
leukocyte | 6.72e-22 | 136 |
nongranular leukocyte | 4.78e-21 | 115 |
mesenchymal cell | 2.83e-12 | 354 |
connective tissue cell | 1.01e-11 | 361 |
mast cell | 6.26e-11 | 5 |
basophil mast progenitor cell | 6.26e-11 | 5 |
motile cell | 8.42e-10 | 386 |
stem cell | 1.03e-07 | 441 |
multi fate stem cell | 1.69e-07 | 427 |
somatic stem cell | 3.47e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
immune system | 4.22e-46 | 93 |
hematopoietic system | 4.54e-45 | 98 |
blood island | 4.54e-45 | 98 |
hemolymphoid system | 2.61e-43 | 108 |
bone marrow | 3.84e-42 | 76 |
bone element | 3.37e-38 | 82 |
skeletal element | 9.31e-34 | 90 |
skeletal system | 3.29e-29 | 100 |
lateral plate mesoderm | 1.08e-15 | 203 |
musculoskeletal system | 5.77e-13 | 167 |
connective tissue | 5.63e-11 | 371 |
hemopoietic organ | 8.00e-08 | 7 |
immune organ | 8.00e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.78e-38 | 31 |
leukemia | 3.74e-34 | 39 |
hematologic cancer | 2.80e-24 | 51 |
immune system cancer | 2.80e-24 | 51 |