FF:10096-102C6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023 | |DRA_sample_Accession=CAGE@SAMD00005187 | ||
|accession_numbers=CAGE;DRX008740;DRR009612;DRZ001037;DRZ002422;DRZ012387;DRZ013772 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000473,UBERON:0000991,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003135,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0003101,UBERON:0000079 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010026 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr7:5111723..5111807,+!p2@RBAK!2.56!365.77!RBAK;;chr12:107078493..107078533,+!p3@RFX4!2.39!243.58!RFX4;;chr6:134273321..134273418,+!p4@TBPL1!2.22!163.99!TBPL1;;chr12:10875733..10875752,-!p8@CSDA!2.11!126.48!CSDA;;chr17:56565736..56565779,-!p1@HSF5!2.06!113.08!HSF5;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.01!101.29!PEG3;;chr19:39390292..39390315,+!p6@NFKBIB!1.99!96.47!NFKBIB;;chr12:10875768..10875808,-!p3@CSDA!1.98!140.68!CSDA;;chr17:7197844..7197869,-!p2@YBX2!1.96!89.77!YBX2;;chr19:39390320..39390346,+!p5@NFKBIB!1.94!86.28!NFKBIB;;chr1:40105299..40105326,-!p1@HEYL!1.92!82.53!HEYL;;chr1:166958504..166958525,+!p1@MAEL!1.92!82.00!MAEL;;chr1:53925516..53925575,+!p1@DMRTB1!1.87!73.96!DMRTB1;;chr10:35464513..35464548,+!p14@CREM!1.85!69.40!CREM;;chr17:7197881..7197901,-!p3@YBX2!1.81!64.31!YBX2;;chr1:202776392..202776436,-!p4@KDM5B!1.81!64.31!KDM5B;;chr4:57547454..57547469,-!p1@HOPX!1.79!60.83!HOPX;;chr3:22414095..22414138,-!p7@ZNF385D!1.78!58.95!ZNF385D;;chr1:53925063..53925076,+!p2@DMRTB1!1.73!53.32!DMRTB1;;chrX:25034067..25034088,-!p1@ARX!1.69!48.23!ARX;;chr16:31085961..31086009,+!p2@ZNF646!1.66!59.49!ZNF646;;chr14:23762777..23762821,-!p3@HOMEZ!1.66!44.48!HOMEZ;;chr19:42349092..42349121,+!p1@DMRTC2!1.65!43.95!DMRTC2;;chr19:6110555..6110617,-!p2@RFX2!1.64!138.81!RFX2;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!1.63!87.89!SOHLH2;;chr19:36132631..36132653,+!p3@ETV2!1.63!42.07!ETV2;;chr13:73629107..73629148,+!p8@KLF5!1.61!39.93!KLF5;;chr3:107364769..107364793,+!p12@BBX!1.59!37.78!BBX;;chr14:89060749..89060783,+!p6@ZC3H14!1.57!36.44!ZC3H14;;chrX:84498989..84499003,+!p1@ZNF711!1.55!47.16!ZNF711;;chr6:134273300..134273320,+!p7@TBPL1!1.55!34.30!TBPL1;;chr17:15983824..15983838,-!p6@NCOR1!1.53!32.69!NCOR1;;chr1:43148029..43148040,+!p7@YBX1!1.52!39.39!YBX1;;chr5:118965244..118965287,+!p1@FAM170A!1.51!31.08!FAM170A;;chr13:45009414..45009442,-!p10@TSC22D1!1.50!30.55!TSC22D1;;chrX:30327504..30327509,-!p1@NR0B1!1.50!30.28!NR0B1;;chr1:26700984..26701002,-!p3@ZNF683!1.48!29.21!ZNF683;;chr3:114070572..114070597,-!p24@ZBTB20!1.48!28.94!ZBTB20;;chrX:131547625..131547644,-!p4@MBNL3!1.48!28.94!MBNL3;;chr17:7197911..7197964,-!p1@YBX2!1.47!28.67!YBX2;;chr10:60144911..60144939,+!p2@TFAM!1.47!28.40!TFAM;;chr20:56100179..56100208,-!p1@CTCFL!1.45!27.06!CTCFL;;chr1:166958538..166958552,+!p2@MAEL!1.44!26.80!MAEL;;chr3:114070550..114070569,-!p28@ZBTB20!1.44!26.80!ZBTB20;;chr9:841691..841702,+!p1@DMRT1!1.44!26.53!DMRT1;;chr1:114301755..114301796,-!p3@PHTF1!1.43!29.21!PHTF1;;chrY:21906594..21906622,-!p1@KDM5D!1.40!24.38!KDM5D;;chr4:4291780..4291807,-!p4@LYAR!1.40!24.38!LYAR;;chr10:35456485..35456498,+!p22@CREM!1.40!24.12!CREM;;chr11:32457075..32457095,-!p1@WT1!1.39!23.58!WT1;;chr14:24025106..24025172,-!p2@ZFHX2!1.35!27.60!ZFHX2;;chr4:26322996..26323031,+!p21@RBPJ!1.34!20.63!RBPJ;;chr8:11561684..11561751,+!p1@GATA4!1.34!20.63!GATA4;;chr20:61051039..61051057,-!p1@GATA5!1.32!19.83!GATA5;;chr1:166958364..166958375,+!p3@MAEL!1.31!19.56!MAEL;;chr12:23737512..23737527,-!p8@SOX5!1.31!19.29!SOX5;;chr5:157079374..157079395,-!p1@SOX30!1.31!19.29!SOX30;;chr15:83952197..83952219,-!p6@BNC1!1.29!18.49!BNC1;;chr5:322733..322758,+!p2@AHRR!1.28!18.22!AHRR;;chr15:101084446..101084488,-!p3@CERS3!1.27!17.69!CERS3;;chr14:64804818..64804842,-!p3@ESR2!1.27!17.69!ESR2;;chr11:32452357..32452363,-!p5@WT1!1.27!17.42!WT1;;chr20:39928705..39928740,-!p11@ZHX3!1.27!17.42!ZHX3;;chr1:8939229..8939249,-!p21@ENO1!1.26!17.15!ENO1;;chr1:151804244..151804310,-!p1@RORC!1.25!16.88!RORC;;chr19:53758167..53758190,-!p3@ZNF677!1.25!16.61!ZNF677;;chr1:214161272..214161322,+!p1@PROX1!1.23!22.24!PROX1;;chr11:65686689..65686700,+!p14@DRAP1!1.22!15.54!DRAP1;;chr5:93077293..93077310,-!p1@POU5F2!1.22!15.54!POU5F2;;chr9:2015215..2015222,+!p35@SMARCA2!1.21!15.27!SMARCA2;;chr14:37051798..37051831,-!p1@NKX2-8!1.20!15.01!NKX2-8;;chr19:48076356..48076387,-!p@chr19:48076356..48076387,-!1.20!14.74!ZNF541;;chr1:247313250..247313291,-!p2@ZNF124!1.20!14.74!ZNF124;;chr19:14117622..14117633,-!p3@RFX1!1.20!14.74!RFX1;;chr19:40503013..40503044,+!p3@ZNF546!1.19!16.61!ZNF546;;chr6:28226984..28227005,-!p4@ZKSCAN4!1.19!14.47!ZKSCAN4;;chr17:70117153..70117174,+!p1@SOX9!1.18!143.36!SOX9;;chr2:176994408..176994492,+!p1@HOXD8!1.18!14.20!HOXD8;;chr5:157079401..157079413,-!p3@SOX30!1.17!13.93!SOX30;;chr12:46246608..46246632,+!p13@ARID2!1.17!13.67!ARID2;;chr19:57352109..57352153,-!p2@ZIM2!1.17!13.67!ZIM2;;chr18:6414884..6414942,-!p1@L3MBTL4!1.16!16.88!L3MBTL4;;chr19:58545369..58545404,+!p2@ZSCAN1!1.16!13.40!ZSCAN1;;chr1:202776145..202776171,-!p10@KDM5B!1.16!13.40!KDM5B;;chr8:23540441..23540466,-!p1@NKX3-1!1.15!26.53!NKX3-1;;chr7:73038839..73038862,-!p1@MLXIPL!1.15!13.13!MLXIPL;;chr19:42349060..42349071,+!p2@DMRTC2!1.15!13.13!DMRTC2;;chr16:66835480..66835492,-!p1@ENST00000559050!1.15!13.13!CCDC79;;chrX:79270245..79270257,+!p1@TBX22!1.15!13.13!TBX22;;chrX:103499602..103499617,-!p1@ESX1!1.15!13.13!ESX1;;chr13:45151509..45151539,-!p6@TSC22D1!1.14!21.71!TSC22D1;;chr14: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| |expression_enrichment_score=chr7:5111723..5111807,+!p2@RBAK!2.56!365.77!RBAK;;chr12:107078493..107078533,+!p3@RFX4!2.39!243.58!RFX4;;chr6:134273321..134273418,+!p4@TBPL1!2.22!163.99!TBPL1;;chr12:10875733..10875752,-!p8@CSDA!2.11!126.48!CSDA;;chr17:56565736..56565779,-!p1@HSF5!2.06!113.08!HSF5;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.01!101.29!PEG3;;chr19:39390292..39390315,+!p6@NFKBIB!1.99!96.47!NFKBIB;;chr12:10875768..10875808,-!p3@CSDA!1.98!140.68!CSDA;;chr17:7197844..7197869,-!p2@YBX2!1.96!89.77!YBX2;;chr19:39390320..39390346,+!p5@NFKBIB!1.94!86.28!NFKBIB;;chr1:40105299..40105326,-!p1@HEYL!1.92!82.53!HEYL;;chr1:166958504..166958525,+!p1@MAEL!1.92!82.00!MAEL;;chr1:53925516..53925575,+!p1@DMRTB1!1.87!73.96!DMRTB1;;chr10:35464513..35464548,+!p14@CREM!1.85!69.40!CREM;;chr17:7197881..7197901,-!p3@YBX2!1.81!64.31!YBX2;;chr1:202776392..202776436,-!p4@KDM5B!1.81!64.31!KDM5B;;chr4:57547454..57547469,-!p1@HOPX!1.79!60.83!HOPX;;chr3:22414095..22414138,-!p7@ZNF385D!1.78!58.95!ZNF385D;;chr1:53925063..53925076,+!p2@DMRTB1!1.73!53.32!DMRTB1;;chrX:25034067..25034088,-!p1@ARX!1.69!48.23!ARX;;chr16:31085961..31086009,+!p2@ZNF646!1.66!59.49!ZNF646;;chr14:23762777..23762821,-!p3@HOMEZ!1.66!44.48!HOMEZ;;chr19:42349092..42349121,+!p1@DMRTC2!1.65!43.95!DMRTC2;;chr19:6110555..6110617,-!p2@RFX2!1.64!138.81!RFX2;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!1.63!87.89!SOHLH2;;chr19:36132631..36132653,+!p3@ETV2!1.63!42.07!ETV2;;chr13:73629107..73629148,+!p8@KLF5!1.61!39.93!KLF5;;chr3:107364769..107364793,+!p12@BBX!1.59!37.78!BBX;;chr14:89060749..89060783,+!p6@ZC3H14!1.57!36.44!ZC3H14;;chrX:84498989..84499003,+!p1@ZNF711!1.55!47.16!ZNF711;;chr6:134273300..134273320,+!p7@TBPL1!1.55!34.30!TBPL1;;chr17:15983824..15983838,-!p6@NCOR1!1.53!32.69!NCOR1;;chr1:43148029..43148040,+!p7@YBX1!1.52!39.39!YBX1;;chr5:118965244..118965287,+!p1@FAM170A!1.51!31.08!FAM170A;;chr13:45009414..45009442,-!p10@TSC22D1!1.50!30.55!TSC22D1;;chrX:30327504..30327509,-!p1@NR0B1!1.50!30.28!NR0B1;;chr1:26700984..26701002,-!p3@ZNF683!1.48!29.21!ZNF683;;chr3:114070572..114070597,-!p24@ZBTB20!1.48!28.94!ZBTB20;;chrX:131547625..131547644,-!p4@MBNL3!1.48!28.94!MBNL3;;chr17:7197911..7197964,-!p1@YBX2!1.47!28.67!YBX2;;chr10:60144911..60144939,+!p2@TFAM!1.47!28.40!TFAM;;chr20:56100179..56100208,-!p1@CTCFL!1.45!27.06!CTCFL;;chr1:166958538..166958552,+!p2@MAEL!1.44!26.80!MAEL;;chr3:114070550..114070569,-!p28@ZBTB20!1.44!26.80!ZBTB20;;chr9:841691..841702,+!p1@DMRT1!1.44!26.53!DMRT1;;chr1:114301755..114301796,-!p3@PHTF1!1.43!29.21!PHTF1;;chrY:21906594..21906622,-!p1@KDM5D!1.40!24.38!KDM5D;;chr4:4291780..4291807,-!p4@LYAR!1.40!24.38!LYAR;;chr10:35456485..35456498,+!p22@CREM!1.40!24.12!CREM;;chr11:32457075..32457095,-!p1@WT1!1.39!23.58!WT1;;chr14:24025106..24025172,-!p2@ZFHX2!1.35!27.60!ZFHX2;;chr4:26322996..26323031,+!p21@RBPJ!1.34!20.63!RBPJ;;chr8:11561684..11561751,+!p1@GATA4!1.34!20.63!GATA4;;chr20:61051039..61051057,-!p1@GATA5!1.32!19.83!GATA5;;chr1:166958364..166958375,+!p3@MAEL!1.31!19.56!MAEL;;chr12:23737512..23737527,-!p8@SOX5!1.31!19.29!SOX5;;chr5:157079374..157079395,-!p1@SOX30!1.31!19.29!SOX30;;chr15:83952197..83952219,-!p6@BNC1!1.29!18.49!BNC1;;chr5:322733..322758,+!p2@AHRR!1.28!18.22!AHRR;;chr15:101084446..101084488,-!p3@CERS3!1.27!17.69!CERS3;;chr14:64804818..64804842,-!p3@ESR2!1.27!17.69!ESR2;;chr11:32452357..32452363,-!p5@WT1!1.27!17.42!WT1;;chr20:39928705..39928740,-!p11@ZHX3!1.27!17.42!ZHX3;;chr1:8939229..8939249,-!p21@ENO1!1.26!17.15!ENO1;;chr1:151804244..151804310,-!p1@RORC!1.25!16.88!RORC;;chr19:53758167..53758190,-!p3@ZNF677!1.25!16.61!ZNF677;;chr1:214161272..214161322,+!p1@PROX1!1.23!22.24!PROX1;;chr11:65686689..65686700,+!p14@DRAP1!1.22!15.54!DRAP1;;chr5:93077293..93077310,-!p1@POU5F2!1.22!15.54!POU5F2;;chr9:2015215..2015222,+!p35@SMARCA2!1.21!15.27!SMARCA2;;chr14:37051798..37051831,-!p1@NKX2-8!1.20!15.01!NKX2-8;;chr19:48076356..48076387,-!p@chr19:48076356..48076387,-!1.20!14.74!ZNF541;;chr1:247313250..247313291,-!p2@ZNF124!1.20!14.74!ZNF124;;chr19:14117622..14117633,-!p3@RFX1!1.20!14.74!RFX1;;chr19:40503013..40503044,+!p3@ZNF546!1.19!16.61!ZNF546;;chr6:28226984..28227005,-!p4@ZKSCAN4!1.19!14.47!ZKSCAN4;;chr17:70117153..70117174,+!p1@SOX9!1.18!143.36!SOX9;;chr2:176994408..176994492,+!p1@HOXD8!1.18!14.20!HOXD8;;chr5:157079401..157079413,-!p3@SOX30!1.17!13.93!SOX30;;chr12:46246608..46246632,+!p13@ARID2!1.17!13.67!ARID2;;chr19:57352109..57352153,-!p2@ZIM2!1.17!13.67!ZIM2;;chr18:6414884..6414942,-!p1@L3MBTL4!1.16!16.88!L3MBTL4;;chr19:58545369..58545404,+!p2@ZSCAN1!1.16!13.40!ZSCAN1;;chr1:202776145..202776171,-!p10@KDM5B!1.16!13.40!KDM5B;;chr8:23540441..23540466,-!p1@NKX3-1!1.15!26.53!NKX3-1;;chr7:73038839..73038862,-!p1@MLXIPL!1.15!13.13!MLXIPL;;chr19:42349060..42349071,+!p2@DMRTC2!1.15!13.13!DMRTC2;;chr16:66835480..66835492,-!p1@ENST00000559050!1.15!13.13!CCDC79;;chrX:79270245..79270257,+!p1@TBX22!1.15!13.13!TBX22;;chrX:103499602..103499617,-!p1@ESX1!1.15!13.13!ESX1;;chr13:45151509..45151539,-!p6@TSC22D1!1.14!21.71!TSC22D1;;chr14:89029308..89029318,+!p3@ZC3H14!1.14!21.44!ZC3H14;;chr20:50792507..50792525,-!p12@ZFP64!1.14!12.86!ZFP64;;chr1:44584544..44584557,+!p4@KLF17!1.13!12.59!KLF17;;chr5:322711..322730,+!p6@AHRR!1.13!12.59!AHRR;;chr5:421030..421044,+!p8@AHRR!1.13!12.59!AHRR;;chr2:208423840..208423851,+!p10@CREB1!1.13!12.59!CREB1;;chr2:208423867..208423882,+!p11@CREB1!1.13!12.59!CREB1;;chr20:51588873..51588953,+!p1@TSHZ2!1.12!16.08!TSHZ2;;chr10:21822984..21823023,+!p5@MLLT10!1.12!15.54!MLLT10;;chr3:37217544..37217586,-!p6@LRRFIP2!1.12!14.20!LRRFIP2;;chr11:65686702..65686715,+!p11@DRAP1!1.12!13.67!DRAP1;;chr3:141144963..141144984,+!p44@ZBTB38!1.12!12.33!ZBTB38;;chr4:299227..299272,-!p1@ZNF732!1.12!12.33!ZNF732;;chr19:38308356..38308378,-!p4@ZNF573!1.12!12.06!ZNF573;;chr6:170863672..170863698,+!p6@TBP!1.12!12.06!TBP;;chr10:35415761..35415800,+!p7@CREM!1.11!30.28!CREM;;chr19:38042335..38042352,+!p4@ZNF540!1.11!11.79!ZNF540;;chr19:46801639..46801699,+!p1@HIF3A!1.11!11.79!HIF3A;;chr1:166958377..166958384,+!p5@MAEL!1.11!11.79!MAEL;;chr12:66218003..66218018,+!p9@HMGA2!1.10!14.20!HMGA2;;chr7:63505799..63505904,+!p1@ZNF727!1.10!11.52!ZNF727;;chr9:127269661..127269719,-!p1@NR5A1!1.10!11.52!NR5A1;;chr11:130184470..130184533,-!p2@ZBTB44!1.09!31.35!ZBTB44;;chr22:22863052..22863133,-!p1@ZNF280B!1.09!30.01!ZNF280B;;chr12:106994905..106994954,+!p6@RFX4!1.09!11.25!RFX4;;chr16:71523222..71523232,-!p2@ZNF23,p3@ZNF19!1.09!11.25!ZNF23;;chr6:19837592..19837621,+!p1@ID4!1.08!67.26!ID4;;chr19:44764031..44764072,+!p1@ZNF233!1.08!13.67!ZNF233;;chr13:45150896..45150927,-!p17@TSC22D1!1.08!10.99!TSC22D1;;chr9:114287433..114287513,+!p1@ZNF483!1.07!27.87!ZNF483;;chr9:127533519..127533573,-!p2@NR6A1!1.07!12.86!NR6A1;;chr17:53342311..53342400,+!p1@HLF!1.07!12.33!HLF;;chr6:134210243..134210257,+!p1@TCF21!1.07!10.72!TCF21;;chr6:170863699..170863716,+!p8@TBP!1.07!10.72!TBP;;chr1:247094628..247094663,-!p5@AHCTF1!1.07!10.72!AHCTF1;;chr9:127533582..127533615,-!p1@NR6A1!1.06!15.81!NR6A1;;chr6:43337180..43337244,-!p1@ZNF318!1.05!39.93!ZNF318;;chr5:158526917..158526932,-!p1@EBF1!1.05!25.72!EBF1;;chr19:19729477..19729542,-!p1@PBX4!1.05!21.97!PBX4;;chr19:12624655..12624680,-!p4@ZNF709!1.05!10.18!ZNF709;;chr5:121465234..121465263,+!p1@ZNF474!1.05!10.18!ZNF474;;chr12:23737534..23737550,-!p11@SOX5!1.05!10.18!SOX5;;chr9:130954135..130954168,-!p13@CIZ1!1.05!10.18!CIZ1;;chr19:58545454..58545498,+!p1@ZSCAN1!1.05!10.18!ZSCAN1;;chr1:43148059..43148108,+!p1@YBX1!1.04!644.45!YBX1;;chr19:38042240..38042309,+!p2@ZNF540!1.04!15.27!ZNF540;;chr21:47063590..47063597,+!p2@PCBP3!1.04!9.91!PCBP3;;chr12:53846612..53846624,+!p24@PCBP2!1.04!9.91!PCBP2;;chr10:135043702..135043729,+!p1@UTF1!1.03!9.65!UTF1;;chr19:42349075..42349085,+!p3@DMRTC2!1.03!9.65!DMRTC2;;chr19:9609272..9609297,-!p1@ZNF560!1.03!9.65!ZNF560;;chr1:197886461..197886558,+!p1@LHX9!1.03!9.65!LHX9;;chr20:30433396..30433414,-!p1@FOXS1!1.03!9.65!FOXS1;;chr6:134273279..134273294,+!p10@TBPL1!1.03!9.65!TBPL1;;chr2:208423853..208423865,+!p12@CREB1!1.03!9.65!CREB1;;chr17:17726892..17726903,-!p6@SREBF1!1.02!10.72!SREBF1;;chr19:58629742..58629787,-!p2@ZSCAN18!1.02!9.38!ZSCAN18;;chr20:44600983..44600997,-!p8@ZNF335!1.02!9.38!ZNF335;;chr12:8034651..8034657,+!p@chr12:8034651..8034657,+!1.02!9.38!NANOGP1;;chrX:70316005..70316034,+!p2@FOXO4!1.01!16.88!FOXO4;;chr14:89029323..89029329,+!p4@ZC3H14!1.00!11.52!ZC3H14;;chr9:138591319..138591340,-!p1@SOHLH1!1.00!9.11!SOHLH1;;chr10:60144869..60144887,+!p3@TFAM!1.00!9.11!TFAM;;chrX:66763856..66763896,+!p1@AR!0.99!12.86!AR;;chr17:74137321..74137337,-!p1@FOXJ1!0.99!8.84!FOXJ1;;chr22:41763452..41763466,+!p2@TEF!0.99!8.84!TEF;;chr19:50542543..50542548,+!p2@ZNF473!0.99!8.84!ZNF473;;chr1:26701003..26701014,-!p4@ZNF683!0.99!8.84!ZNF683;;chr1:43147829..43147842,+!p15@YBX1!0.99!8.84!YBX1;;chr6:27342388..27342399,+!p10@ZNF391!0.99!8.84!ZNF391;;chr8:116504458..116504481,-!p24@TRPS1!0.99!8.84!TRPS1;;chr19:50529247..50529296,+!p1@ZNF473!0.98!56.54!ZNF473;;chr19:23493420..23493428,-!p@chr19:23493420..23493428,-!0.98!8.57!ZNF725;;chr5:157079442..157079452,-!p5@SOX30!0.98!8.57!SOX30;;chr13:45151548..45151569,-!p9@TSC22D1!0.98!8.57!TSC22D1;;chr11:16430399..16430440,-!p27@SOX6!0.97!8.31!SOX6;;chr1:173837214..173837234,+!p6@ZBTB37!0.97!8.31!ZBTB37;;chrX:132352373..132352384,-!p1@TFDP3!0.97!8.31!TFDP3;;chr17:4889630..4889648,-!p14@CAMTA2!0.97!8.31!CAMTA2;;chr17:47439354..47439383,-!p3@ZNF652!0.96!13.13!ZNF652;;chr6:31515311..31515330,+!p3@NFKBIL1!0.96!11.79!NFKBIL1;;chr8:11534521..11534533,+!p4@GATA4!0.96!8.04!GATA4;;chr11:65554898..65554910,+!p3@OVOL1!0.96!8.04!OVOL1;;chr12:53846463..53846478,+!p25@PCBP2!0.96!8.04!PCBP2;;chr18:6414849..6414876,-!p2@L3MBTL4!0.96!8.04!L3MBTL4;;chr21:44394645..44394737,+!p1@PKNOX1!0.95!68.06!PKNOX1;;chr14:89029336..89029363,+!p2@ZC3H14!0.95!32.69!ZC3H14;;chr4:47916613..47916640,-!p3@NFXL1!0.95!24.38!NFXL1;;chr2:42795651..42795676,+!p3@MTA3!0.94!21.17!MTA3;;chr1:211432593..211432642,+!p6@RCOR3!0.94!11.25!RCOR3;;chr14:69260117..69260141,-!p4@ZFP36L1!0.94!10.45!ZFP36L1;;chr17:38497662..38497713,+!p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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000079;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000473;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000990;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000991;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002323;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003135;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122 | |||
|ffid_belonging_in_development=UBERON:0009117,UBERON:0002532,UBERON:0006603,UBERON:0005564,UBERON:0010316 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/testis%252c%2520adult%252c%2520pool2.CNhs12998.10096-102C6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/testis%252c%2520adult%252c%2520pool2.CNhs12998.10096-102C6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/testis%252c%2520adult%252c%2520pool2.CNhs12998.10096-102C6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/testis%252c%2520adult%252c%2520pool2.CNhs12998.10096-102C6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/testis%252c%2520adult%252c%2520pool2.CNhs12998.10096-102C6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10096-102C6 | |id=FF:10096-102C6 | ||
|is_a=EFO:0002091;;FF:0010026 | |is_a=EFO:0002091;;FF:0010026 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs12998 | |||
|library_id_phase_based=2:CNhs12998 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10096 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10096 | |||
|name=testis, adult, pool2 | |name=testis, adult, pool2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 43: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12998,LSID999,release012,COMPLETED | |profile_hcage=CNhs12998,LSID999,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=102 | |rna_box=102 | ||
|rna_catalog_number=Cat: 636643 Lot: 8101369A-16 | |rna_catalog_number=Cat: 636643 Lot: 8101369A-16 | ||
| Line 58: | Line 79: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 79: | Line 101: | ||
|top_motifs=MYB:10.0864286341;JUN:7.30649851472;RFX1:5.94731829188;ZNF148:4.707496114;NRF1:3.97020896235;SOX17:3.57828104986;NFY{A,B,C}:3.23235705863;BREu{core}:2.78964234405;RFX2..5_RFXANK_RFXAP:2.72147418388;HLF:2.29781240706;GFI1:1.89937320879;ATF2:1.89676354268;ATF4:1.7758756737;ZNF143:1.77169046649;ELK1,4_GABP{A,B1}:1.64321891611;ZFP161:1.61256153861;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.58874724623;NR5A1,2:1.56057557209;FOXN1:1.45356052254;ZBTB16:1.45016916429;SP1:1.43539310045;CREB1:1.36700732239;TEF:1.28072957545;NFIX:1.22453493655;PPARG:1.19440725598;SOX5:1.1901004234;HIF1A:1.13794343925;PITX1..3:0.930040880311;ZIC1..3:0.900969718891;POU6F1:0.831542091063;RXR{A,B,G}:0.807805907362;MTE{core}:0.747665353271;YY1:0.741661855782;TFAP2{A,C}:0.724063823346;ESR1:0.690805263842;HIC1:0.624046777344;XCPE1{core}:0.604777807924;GFI1B:0.582558471684;E2F1..5:0.501103840175;HOXA9_MEIS1:0.461819016117;AR:0.417528926204;bHLH_family:0.380236275922;TFAP2B:0.296931447456;EGR1..3:0.289960552255;NFE2L1:0.282240759808;RREB1:0.26938269631;NKX2-1,4:0.235629426913;NKX3-1:0.23435118842;TFDP1:0.229729571608;ATF6:0.1958112042;PATZ1:0.134949568414;NKX6-1,2:0.125160394449;ZNF423:0.117444722147;HOX{A4,D4}:0.103759656261;EN1,2:0.0825188562409;SNAI1..3:0.080629191679;DMAP1_NCOR{1,2}_SMARC:0.0804570436801;PAX5:0.0792604330331;MTF1:0.0788652888092;IKZF2:0.0536691971517;FOXP1:0.0425025401189;SREBF1,2:0.0416577900706;MED-1{core}:0.0377036225339;RBPJ:0.0293857142075;STAT5{A,B}:0.0188868996803;POU3F1..4:0.0165582242773;GCM1,2:-0.00993599284746;ZBTB6:-0.0346166690073;GZF1:-0.0672392016831;SRF:-0.0853820187491;HSF1,2:-0.110458643952;MYBL2:-0.138850561575;REST:-0.152217204118;LHX3,4:-0.155307062468;SOX2:-0.1639874218;SOX{8,9,10}:-0.165681484707;ATF5_CREB3:-0.167831592503;ALX1:-0.195457471917;MYFfamily:-0.19915692245;PBX1:-0.203467507251;ZEB1:-0.230795066096;EVI1:-0.240199797242;NHLH1,2:-0.265962851489;TEAD1:-0.318253687815;TGIF1:-0.319441646253;PAX1,9:-0.352994749132;TBP:-0.356881354001;GTF2A1,2:-0.35952162664;POU2F1..3:-0.379934491344;HNF4A_NR2F1,2:-0.380064398906;HBP1_HMGB_SSRP1_UBTF:-0.385193744544;HNF1A:-0.392090196003;UFEwm:-0.426471942283;PAX8:-0.441680143903;LMO2:-0.482896540615;GTF2I:-0.502203148936;TOPORS:-0.523912494693;NR3C1:-0.528472682792;PAX3,7:-0.544845220536;RXRA_VDR{dimer}:-0.54529895043;AIRE:-0.58484550891;NANOG{mouse}:-0.594013681728;GATA6:-0.638513212743;FOX{D1,D2}:-0.674995526733;STAT1,3:-0.714482581742;ESRRA:-0.742025485681;HMX1:-0.762401854693;FOXD3:-0.768382131488;CUX2:-0.768403246714;MAZ:-0.770107117237;HOX{A6,A7,B6,B7}:-0.777772633312;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.799110882599;ONECUT1,2:-0.807302809542;TFAP4:-0.849854627687;MEF2{A,B,C,D}:-0.862937339679;PDX1:-0.863265561769;MZF1:-0.880408125739;HAND1,2:-0.930472312755;GLI1..3:-0.939449295799;AHR_ARNT_ARNT2:-0.97166797392;HOX{A5,B5}:-0.973299785583;TP53:-0.984571147066;SPIB:-0.998548781676;HES1:-0.999086558721;PRRX1,2:-1.00053572685;MYOD1:-1.01199299946;TFCP2:-1.04024509069;PAX2:-1.04111896929;SPI1:-1.07436548368;TBX4,5:-1.09989591045;TLX1..3_NFIC{dimer}:-1.10034397782;KLF4:-1.10176968209;GATA4:-1.11378482276;FOXM1:-1.12099419532;BPTF:-1.13118482382;DBP:-1.16476959584;IRF7:-1.1703812567;NFKB1_REL_RELA:-1.18721129475;CDX1,2,4:-1.19647811893;NKX2-3_NKX2-5:-1.22908653954;ADNP_IRX_SIX_ZHX:-1.24524236413;RUNX1..3:-1.2500382483;FOS_FOS{B,L1}_JUN{B,D}:-1.25114316637;EBF1:-1.2746834086;FOXO1,3,4:-1.29482734015;TLX2:-1.31336827889;IKZF1:-1.33353697998;FOXQ1:-1.34377985016;NKX3-2:-1.35668073041;NKX2-2,8:-1.35785401655;ETS1,2:-1.36277712851;NFE2:-1.37626661819;T:-1.40018365893;BACH2:-1.41117395696;ELF1,2,4:-1.42947871571;CDC5L:-1.43976354828;ALX4:-1.44044088474;FOX{F1,F2,J1}:-1.44897524059;FOXP3:-1.46297929845;FOSL2:-1.47413588838;TAL1_TCF{3,4,12}:-1.48604910378;IRF1,2:-1.50999376141;LEF1_TCF7_TCF7L1,2:-1.51853060084;RORA:-1.53610256939;XBP1:-1.61060678248;ZNF384:-1.6236676645;VSX1,2:-1.63798164625;SPZ1:-1.68002868737;NR6A1:-1.73600613659;EP300:-1.74639243884;FOXA2:-1.75377336565;SMAD1..7,9:-1.8147297016;NR1H4:-1.84876875708;NFIL3:-1.89712253523;CEBPA,B_DDIT3:-1.91736107783;NFE2L2:-1.96864965697;OCT4_SOX2{dimer}:-1.9907526461;POU1F1:-2.02841732661;PAX6:-2.08878518426;ZNF238:-2.10194572792;STAT2,4,6:-2.14512294725;PRDM1:-2.16486953249;MAFB:-2.17177872798;FOXL1:-2.17547190908;NFATC1..3:-2.19671917853;ARID5B:-2.28379208869;NANOG:-2.72959838955;POU5F1:-2.78517402996;HMGA1,2:-2.88254795919;CRX:-3.07822750668;PAX4:-3.15239800724;FOX{I1,J2}:-4.54855561992 | |top_motifs=MYB:10.0864286341;JUN:7.30649851472;RFX1:5.94731829188;ZNF148:4.707496114;NRF1:3.97020896235;SOX17:3.57828104986;NFY{A,B,C}:3.23235705863;BREu{core}:2.78964234405;RFX2..5_RFXANK_RFXAP:2.72147418388;HLF:2.29781240706;GFI1:1.89937320879;ATF2:1.89676354268;ATF4:1.7758756737;ZNF143:1.77169046649;ELK1,4_GABP{A,B1}:1.64321891611;ZFP161:1.61256153861;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.58874724623;NR5A1,2:1.56057557209;FOXN1:1.45356052254;ZBTB16:1.45016916429;SP1:1.43539310045;CREB1:1.36700732239;TEF:1.28072957545;NFIX:1.22453493655;PPARG:1.19440725598;SOX5:1.1901004234;HIF1A:1.13794343925;PITX1..3:0.930040880311;ZIC1..3:0.900969718891;POU6F1:0.831542091063;RXR{A,B,G}:0.807805907362;MTE{core}:0.747665353271;YY1:0.741661855782;TFAP2{A,C}:0.724063823346;ESR1:0.690805263842;HIC1:0.624046777344;XCPE1{core}:0.604777807924;GFI1B:0.582558471684;E2F1..5:0.501103840175;HOXA9_MEIS1:0.461819016117;AR:0.417528926204;bHLH_family:0.380236275922;TFAP2B:0.296931447456;EGR1..3:0.289960552255;NFE2L1:0.282240759808;RREB1:0.26938269631;NKX2-1,4:0.235629426913;NKX3-1:0.23435118842;TFDP1:0.229729571608;ATF6:0.1958112042;PATZ1:0.134949568414;NKX6-1,2:0.125160394449;ZNF423:0.117444722147;HOX{A4,D4}:0.103759656261;EN1,2:0.0825188562409;SNAI1..3:0.080629191679;DMAP1_NCOR{1,2}_SMARC:0.0804570436801;PAX5:0.0792604330331;MTF1:0.0788652888092;IKZF2:0.0536691971517;FOXP1:0.0425025401189;SREBF1,2:0.0416577900706;MED-1{core}:0.0377036225339;RBPJ:0.0293857142075;STAT5{A,B}:0.0188868996803;POU3F1..4:0.0165582242773;GCM1,2:-0.00993599284746;ZBTB6:-0.0346166690073;GZF1:-0.0672392016831;SRF:-0.0853820187491;HSF1,2:-0.110458643952;MYBL2:-0.138850561575;REST:-0.152217204118;LHX3,4:-0.155307062468;SOX2:-0.1639874218;SOX{8,9,10}:-0.165681484707;ATF5_CREB3:-0.167831592503;ALX1:-0.195457471917;MYFfamily:-0.19915692245;PBX1:-0.203467507251;ZEB1:-0.230795066096;EVI1:-0.240199797242;NHLH1,2:-0.265962851489;TEAD1:-0.318253687815;TGIF1:-0.319441646253;PAX1,9:-0.352994749132;TBP:-0.356881354001;GTF2A1,2:-0.35952162664;POU2F1..3:-0.379934491344;HNF4A_NR2F1,2:-0.380064398906;HBP1_HMGB_SSRP1_UBTF:-0.385193744544;HNF1A:-0.392090196003;UFEwm:-0.426471942283;PAX8:-0.441680143903;LMO2:-0.482896540615;GTF2I:-0.502203148936;TOPORS:-0.523912494693;NR3C1:-0.528472682792;PAX3,7:-0.544845220536;RXRA_VDR{dimer}:-0.54529895043;AIRE:-0.58484550891;NANOG{mouse}:-0.594013681728;GATA6:-0.638513212743;FOX{D1,D2}:-0.674995526733;STAT1,3:-0.714482581742;ESRRA:-0.742025485681;HMX1:-0.762401854693;FOXD3:-0.768382131488;CUX2:-0.768403246714;MAZ:-0.770107117237;HOX{A6,A7,B6,B7}:-0.777772633312;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.799110882599;ONECUT1,2:-0.807302809542;TFAP4:-0.849854627687;MEF2{A,B,C,D}:-0.862937339679;PDX1:-0.863265561769;MZF1:-0.880408125739;HAND1,2:-0.930472312755;GLI1..3:-0.939449295799;AHR_ARNT_ARNT2:-0.97166797392;HOX{A5,B5}:-0.973299785583;TP53:-0.984571147066;SPIB:-0.998548781676;HES1:-0.999086558721;PRRX1,2:-1.00053572685;MYOD1:-1.01199299946;TFCP2:-1.04024509069;PAX2:-1.04111896929;SPI1:-1.07436548368;TBX4,5:-1.09989591045;TLX1..3_NFIC{dimer}:-1.10034397782;KLF4:-1.10176968209;GATA4:-1.11378482276;FOXM1:-1.12099419532;BPTF:-1.13118482382;DBP:-1.16476959584;IRF7:-1.1703812567;NFKB1_REL_RELA:-1.18721129475;CDX1,2,4:-1.19647811893;NKX2-3_NKX2-5:-1.22908653954;ADNP_IRX_SIX_ZHX:-1.24524236413;RUNX1..3:-1.2500382483;FOS_FOS{B,L1}_JUN{B,D}:-1.25114316637;EBF1:-1.2746834086;FOXO1,3,4:-1.29482734015;TLX2:-1.31336827889;IKZF1:-1.33353697998;FOXQ1:-1.34377985016;NKX3-2:-1.35668073041;NKX2-2,8:-1.35785401655;ETS1,2:-1.36277712851;NFE2:-1.37626661819;T:-1.40018365893;BACH2:-1.41117395696;ELF1,2,4:-1.42947871571;CDC5L:-1.43976354828;ALX4:-1.44044088474;FOX{F1,F2,J1}:-1.44897524059;FOXP3:-1.46297929845;FOSL2:-1.47413588838;TAL1_TCF{3,4,12}:-1.48604910378;IRF1,2:-1.50999376141;LEF1_TCF7_TCF7L1,2:-1.51853060084;RORA:-1.53610256939;XBP1:-1.61060678248;ZNF384:-1.6236676645;VSX1,2:-1.63798164625;SPZ1:-1.68002868737;NR6A1:-1.73600613659;EP300:-1.74639243884;FOXA2:-1.75377336565;SMAD1..7,9:-1.8147297016;NR1H4:-1.84876875708;NFIL3:-1.89712253523;CEBPA,B_DDIT3:-1.91736107783;NFE2L2:-1.96864965697;OCT4_SOX2{dimer}:-1.9907526461;POU1F1:-2.02841732661;PAX6:-2.08878518426;ZNF238:-2.10194572792;STAT2,4,6:-2.14512294725;PRDM1:-2.16486953249;MAFB:-2.17177872798;FOXL1:-2.17547190908;NFATC1..3:-2.19671917853;ARID5B:-2.28379208869;NANOG:-2.72959838955;POU5F1:-2.78517402996;HMGA1,2:-2.88254795919;CRX:-3.07822750668;PAX4:-3.15239800724;FOX{I1,J2}:-4.54855561992 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10096-102C6;search_select_hide=table117:FF:10096-102C6 | |||
}} | }} | ||
Latest revision as of 12:21, 3 June 2020
| Name: | testis, adult, pool2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12998 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12998
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12998
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.178 |
| 10 | 10 | 0.355 |
| 100 | 100 | 0.565 |
| 101 | 101 | 0.529 |
| 102 | 102 | 0.482 |
| 103 | 103 | 0.419 |
| 104 | 104 | 0.59 |
| 105 | 105 | 0.233 |
| 106 | 106 | 1.50768e-6 |
| 107 | 107 | 0.00332 |
| 108 | 108 | 0.282 |
| 109 | 109 | 0.861 |
| 11 | 11 | 0.132 |
| 110 | 110 | 0.381 |
| 111 | 111 | 0.978 |
| 112 | 112 | 0.0248 |
| 113 | 113 | 0.766 |
| 114 | 114 | 0.329 |
| 115 | 115 | 0.793 |
| 116 | 116 | 0.374 |
| 117 | 117 | 0.599 |
| 118 | 118 | 0.505 |
| 119 | 119 | 0.168 |
| 12 | 12 | 0.887 |
| 120 | 120 | 0.0753 |
| 121 | 121 | 0.453 |
| 122 | 122 | 0.892 |
| 123 | 123 | 0.313 |
| 124 | 124 | 0.368 |
| 125 | 125 | 0.662 |
| 126 | 126 | 0.659 |
| 127 | 127 | 0.264 |
| 128 | 128 | 0.00178 |
| 129 | 129 | 0.561 |
| 13 | 13 | 0.689 |
| 130 | 130 | 0.402 |
| 131 | 131 | 0.257 |
| 132 | 132 | 0.631 |
| 133 | 133 | 0.968 |
| 134 | 134 | 0.802 |
| 135 | 135 | 0.128 |
| 136 | 136 | 0.0305 |
| 137 | 137 | 0.227 |
| 138 | 138 | 0.116 |
| 139 | 139 | 0.399 |
| 14 | 14 | 0.421 |
| 140 | 140 | 0.151 |
| 141 | 141 | 0.162 |
| 142 | 142 | 0.919 |
| 143 | 143 | 0.993 |
| 144 | 144 | 0.949 |
| 145 | 145 | 0.152 |
| 146 | 146 | 0.644 |
| 147 | 147 | 0.421 |
| 148 | 148 | 0.137 |
| 149 | 149 | 0.0707 |
| 15 | 15 | 0.362 |
| 150 | 150 | 0.358 |
| 151 | 151 | 0.172 |
| 152 | 152 | 0.0533 |
| 153 | 153 | 0.283 |
| 154 | 154 | 0.211 |
| 155 | 155 | 0.315 |
| 156 | 156 | 0.597 |
| 157 | 157 | 0.876 |
| 158 | 158 | 0.0493 |
| 159 | 159 | 0.43 |
| 16 | 16 | 0.334 |
| 160 | 160 | 0.0346 |
| 161 | 161 | 0.916 |
| 162 | 162 | 0.818 |
| 163 | 163 | 0.195 |
| 164 | 164 | 0.00448 |
| 165 | 165 | 0.358 |
| 166 | 166 | 0.375 |
| 167 | 167 | 0.812 |
| 168 | 168 | 0.254 |
| 169 | 169 | 0.0576 |
| 17 | 17 | 0.111 |
| 18 | 18 | 0.0775 |
| 19 | 19 | 0.35 |
| 2 | 2 | 0.115 |
| 20 | 20 | 0.325 |
| 21 | 21 | 0.548 |
| 22 | 22 | 0.314 |
| 23 | 23 | 0.00914 |
| 24 | 24 | 0.811 |
| 25 | 25 | 0.743 |
| 26 | 26 | 0.296 |
| 27 | 27 | 0.0967 |
| 28 | 28 | 0.823 |
| 29 | 29 | 0.969 |
| 3 | 3 | 0.0916 |
| 30 | 30 | 0.792 |
| 31 | 31 | 0.208 |
| 32 | 32 | 0.2 |
| 33 | 33 | 0.754 |
| 34 | 34 | 0.502 |
| 35 | 35 | 0.418 |
| 36 | 36 | 0.0896 |
| 37 | 37 | 0.119 |
| 38 | 38 | 0.501 |
| 39 | 39 | 0.713 |
| 4 | 4 | 0.0552 |
| 40 | 40 | 0.754 |
| 41 | 41 | 0.263 |
| 42 | 42 | 0.329 |
| 43 | 43 | 0.19 |
| 44 | 44 | 0.354 |
| 45 | 45 | 0.631 |
| 46 | 46 | 0.114 |
| 47 | 47 | 0.469 |
| 48 | 48 | 0.379 |
| 49 | 49 | 0.865 |
| 5 | 5 | 0.218 |
| 50 | 50 | 0.978 |
| 51 | 51 | 0.191 |
| 52 | 52 | 0.118 |
| 53 | 53 | 0.279 |
| 54 | 54 | 0.216 |
| 55 | 55 | 0.147 |
| 56 | 56 | 0.238 |
| 57 | 57 | 0.167 |
| 58 | 58 | 0.511 |
| 59 | 59 | 0.0469 |
| 6 | 6 | 0.747 |
| 60 | 60 | 0.0272 |
| 61 | 61 | 0.752 |
| 62 | 62 | 0.258 |
| 63 | 63 | 0.204 |
| 64 | 64 | 0.55 |
| 65 | 65 | 0.119 |
| 66 | 66 | 3.61844e-8 |
| 67 | 67 | 0.516 |
| 68 | 68 | 0.262 |
| 69 | 69 | 0.792 |
| 7 | 7 | 0.7 |
| 70 | 70 | 0.23 |
| 71 | 71 | 0.128 |
| 72 | 72 | 0.495 |
| 73 | 73 | 0.137 |
| 74 | 74 | 0.273 |
| 75 | 75 | 0.312 |
| 76 | 76 | 0.725 |
| 77 | 77 | 0.0759 |
| 78 | 78 | 0.0652 |
| 79 | 79 | 0.594 |
| 8 | 8 | 0.433 |
| 80 | 80 | 0.34 |
| 81 | 81 | 0.299 |
| 82 | 82 | 0.15 |
| 83 | 83 | 0.37 |
| 84 | 84 | 0.515 |
| 85 | 85 | 0.0273 |
| 86 | 86 | 0.362 |
| 87 | 87 | 0.385 |
| 88 | 88 | 0.699 |
| 89 | 89 | 0.118 |
| 9 | 9 | 0.335 |
| 90 | 90 | 0.101 |
| 91 | 91 | 0.182 |
| 92 | 92 | 0.0717 |
| 93 | 93 | 0.324 |
| 94 | 94 | 0.0133 |
| 95 | 95 | 0.854 |
| 96 | 96 | 0.42 |
| 97 | 97 | 0.866 |
| 98 | 98 | 0.681 |
| 99 | 99 | 0.271 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12998
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010026 human testis - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000473 (testis)
0000991 (gonad)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003135 (male reproductive organ)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0003101 (male organism)
0000079 (male reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010026 (human testis - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0009117 (indifferent gonad)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)
