FF:12176-128I7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023 | |DRA_sample_Accession=CAGE@SAMD00005983 | ||
|HumanCAGEScanFiles=NCig10019;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Whole%2520blood%2520%28ribopure%29%252c%2520donor090325%252c%2520donation1.NCig10019.12176-128I7.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Whole%2520blood%2520%28ribopure%29%252c%2520donor090325%252c%2520donation1.NCig10019.12176-128I7.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Whole%2520blood%2520%28ribopure%29%252c%2520donor090325%252c%2520donation1.NCig10019.12176-128I7.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Whole%2520blood%2520%28ribopure%29%252c%2520donor090325%252c%2520donation1.NCig10019.12176-128I7.hg19.GCTATA.pairs.bed.gz | |||
|accession_numbers=CAGE;DRX008532;DRR009404;DRZ000829;DRZ002214;DRZ012179;DRZ013564 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000178,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0010053,FF:0000004,FF:0000281 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chrX:131623044..131623089,-!p1@MBNL3!2.73!2090.96!MBNL3;;chr11:47400078..47400106,-!p1@SPI1!2.48!301.60!SPI1;;chr12:54694653..54694672,-!p2@NFE2!2.29!193.44!NFE2;;chrX:131623026..131623039,-!p5@MBNL3!2.26!180.58!MBNL3;;chr2:68592406..68592424,+!p1@PLEK!2.25!177.01!PLEK;;chrX:131622958..131622978,-!p3@MBNL3!2.17!184.39!MBNL3;;chrX:131622988..131623006,-!p8@MBNL3!2.14!137.94!MBNL3;;chr12:54694758..54694805,-!p1@NFE2!2.13!159.14!NFE2;;chrX:70315688..70315709,+!p1@FOXO4!1.96!200.83!FOXO4;;chr7:28220506..28220552,-!p3@JAZF1!1.86!71.23!JAZF1;;chr12:54694807..54694832,-!p3@NFE2!1.85!69.33!NFE2;;chr2:70142232..70142251,+!p1@MXD1!1.84!368.54!MXD1;;chr7:28220354..28220441,-!p1@JAZF1!1.83!967.70!JAZF1;;chr16:85932760..85932775,+!p1@IRF8!1.76!56.22!IRF8;;chr5:133451294..133451310,+!p2@TCF7!1.76!55.98!TCF7;;chr10:51572408..51572454,+!p3@NCOA4!1.74!298.98!NCOA4;;chr7:50343634..50343717,+!p2@IKZF1!1.72!50.98!IKZF1;;chr3:128212033..128212051,-!p1@GATA2!1.71!50.51!GATA2;;chr10:51572339..51572376,+!p4@NCOA4!1.70!106.97!NCOA4;;chr17:45810594..45810608,+!p1@TBX21!1.69!48.36!TBX21;;chr4:109087445..109087463,-!p1@LEF1!1.67!45.98!LEF1;;chr7:50344289..50344323,+!p1@IKZF1!1.66!45.03!IKZF1;;chr9:117150254..117150271,-!p1@AKNA!1.65!114.35!AKNA;;chr10:51585449..51585487,+!p6@NCOA4!1.63!41.45!NCOA4;;chr2:231090433..231090469,+!p1@SP140!1.61!39.31!SP140;;chr1:25256756..25256774,-!p1@RUNX3!1.54!61.94!RUNX3;;chr3:141748010..141748030,-!p8@TFDP2!1.54!33.35!TFDP2;;chr3:63953435..63953499,+!p1@ATXN7!1.53!32.64!ATXN7;;chr17:37934365..37934387,-!p2@IKZF3!1.53!32.64!IKZF3;;chr2:148778973..148779035,+!p3@MBD5!1.51!78.62!MBD5;;chr19:50922187..50922204,+!p1@SPIB!1.51!31.21!SPIB;;chr2:100759010..100759035,-!p1@AFF3!1.50!30.49!AFF3;;chr6:391743..391759,+!p1@IRF4!1.49!29.78!IRF4;;chr20:56195474..56195506,-!p1@ZBP1!1.47!28.35!ZBP1;;chr5:133450365..133450444,+!p1@TCF7!1.46!121.74!TCF7;;chr11:111249993..111250006,-!p1@POU2AF1!1.46!28.11!POU2AF1;;chrY:21906594..21906622,-!p1@KDM5D!1.46!27.87!KDM5D;;chr3:27763807..27763822,-!p1@EOMES!1.45!26.92!EOMES;;chr2:192015701..192015743,-!p1@STAT4!1.43!35.50!STAT4;;chr11:47400062..47400077,-!p2@SPI1!1.43!25.73!SPI1;;chr19:13213511..13213545,-!p2@LYL1!1.41!26.92!LYL1;;chr21:34442439..34442455,+!p1@OLIG1!1.41!24.78!OLIG1;;chr12:54778471..54778528,-!p1@ZNF385A!1.40!24.06!ZNF385A;;chr20:50159198..50159299,-!p1@NFATC2!1.38!33.11!NFATC2;;chr2:68592394..68592405,+!p2@PLEK!1.37!22.63!PLEK;;chr7:28725715..28725727,+!p3@CREB5!1.36!25.97!CREB5;;chr11:47399996..47400014,-!p4@SPI1!1.36!22.16!SPI1;;chr2:231090471..231090504,+!p2@SP140!1.35!21.20!SP140;;chr19:12998003..12998021,-!p1@KLF1!1.34!20.96!KLF1;;chr3:187463179..187463201,-!p2@BCL6!1.33!82.90!BCL6;;chr2:192015750..192015793,-!p2@STAT4!1.33!27.16!STAT4;;chr4:185395633..185395651,-!p2@IRF2!1.30!30.49!IRF2;;chr6:144385698..144385742,-!p2@PLAGL1!1.30!23.11!PLAGL1;;chr19:16435625..16435682,+!p1@KLF2!1.29!573.19!KLF2;;chr10:111985713..111985774,+!p2@MXI1!1.29!171.77!MXI1;;chr10:51585430..51585448,+!p7@NCOA4!1.28!18.11!NCOA4;;chr7:50344251..50344288,+!p3@IKZF1!1.28!17.87!IKZF1;;chr3:71355163..71355209,-!p5@FOXP1!1.27!24.30!FOXP1;;chrX:48644984..48645005,+!p1@GATA1!1.25!16.68!GATA1;;chr12:54689552..54689574,-!p6@NFE2!1.25!16.68!NFE2;;chr11:47400045..47400060,-!p6@SPI1!1.24!16.44!SPI1;;chr2:100759037..100759058,-!p2@AFF3!1.24!16.20!AFF3;;chrX:106960285..106960299,-!p1@TSC22D3!1.23!422.15!TSC22D3;;chr11:128563948..128564003,+!p1@FLI1!1.23!190.35!FLI1;;chr13:41593425..41593480,-!p1@ELF1!1.23!100.53!ELF1;;chr11:47400032..47400043,-!p5@SPI1!1.22!15.72!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.22!15.49!SPI1;;chr3:71542615..71542644,-!p12@FOXP1!1.22!15.49!FOXP1;;chr6:106546808..106546833,+!p3@PRDM1!1.21!19.06!PRDM1;;chr7:28725740..28725778,+!p1@CREB5!1.19!127.69!CREB5;;chr2:70167296..70167306,+!p3@MXD1!1.19!22.16!MXD1;;chr14:75988771..75988826,+!p1@BATF!1.19!19.30!BATF;;chr7:50343895..50343936,+!p5@IKZF1!1.19!14.53!IKZF1;;chr5:88178983..88179012,-!p1@MEF2C!1.18!107.20!MEF2C;;chr3:18486354..18486377,-!p2@SATB1!1.18!17.63!SATB1;;chr17:38020392..38020477,-!p1@IKZF3!1.18!14.06!IKZF3;;chr2:208031943..208031978,-!p5@KLF7!1.17!18.34!KLF7;;chr6:91006518..91006570,-!p1@BACH2!1.16!30.73!BACH2;;chr5:176735063..176735088,-!p2@MXD3!1.16!13.34!MXD3;;chr16:3313791..3313834,+!p2@ZNF263!1.14!28.35!ZNF263;;chr4:106068026..106068084,+!p1@TET2!1.13!113.16!TET2;;chr15:60884706..60884743,-!p1@RORA!1.13!64.08!RORA;;chr11:128392273..128392308,-!p2@ETS1!1.13!52.65!ETS1;;chr4:185395191..185395226,-!p4@IRF2!1.13!17.63!IRF2;;chr5:133451347..133451358,+!p3@TCF7!1.13!12.39!TCF7;;chr1:47697965..47697991,-!p7@TAL1!1.13!12.39!TAL1;;chr21:36421535..36421610,-!p2@RUNX1!1.12!43.83!RUNX1;;chr16:88752889..88752921,-!p1@SNAI3!1.12!14.29!SNAI3;;chr4:109090075..109090095,-!p2@LEF1!1.12!12.15!LEF1;;chrX:131574281..131574293,-!p18@MBNL3!1.12!12.15!MBNL3;;chr10:111967345..111967422,+!p1@MXI1!1.11!191.54!MXI1;;chr5:142782823..142782854,-!p3@NR3C1!1.11!17.15!NR3C1;;chr5:131826457..131826514,-!p1@IRF1!1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| |expression_enrichment_score=chrX:131623044..131623089,-!p1@MBNL3!2.73!2090.96!MBNL3;;chr11:47400078..47400106,-!p1@SPI1!2.48!301.60!SPI1;;chr12:54694653..54694672,-!p2@NFE2!2.29!193.44!NFE2;;chrX:131623026..131623039,-!p5@MBNL3!2.26!180.58!MBNL3;;chr2:68592406..68592424,+!p1@PLEK!2.25!177.01!PLEK;;chrX:131622958..131622978,-!p3@MBNL3!2.17!184.39!MBNL3;;chrX:131622988..131623006,-!p8@MBNL3!2.14!137.94!MBNL3;;chr12:54694758..54694805,-!p1@NFE2!2.13!159.14!NFE2;;chrX:70315688..70315709,+!p1@FOXO4!1.96!200.83!FOXO4;;chr7:28220506..28220552,-!p3@JAZF1!1.86!71.23!JAZF1;;chr12:54694807..54694832,-!p3@NFE2!1.85!69.33!NFE2;;chr2:70142232..70142251,+!p1@MXD1!1.84!368.54!MXD1;;chr7:28220354..28220441,-!p1@JAZF1!1.83!967.70!JAZF1;;chr16:85932760..85932775,+!p1@IRF8!1.76!56.22!IRF8;;chr5:133451294..133451310,+!p2@TCF7!1.76!55.98!TCF7;;chr10:51572408..51572454,+!p3@NCOA4!1.74!298.98!NCOA4;;chr7:50343634..50343717,+!p2@IKZF1!1.72!50.98!IKZF1;;chr3:128212033..128212051,-!p1@GATA2!1.71!50.51!GATA2;;chr10:51572339..51572376,+!p4@NCOA4!1.70!106.97!NCOA4;;chr17:45810594..45810608,+!p1@TBX21!1.69!48.36!TBX21;;chr4:109087445..109087463,-!p1@LEF1!1.67!45.98!LEF1;;chr7:50344289..50344323,+!p1@IKZF1!1.66!45.03!IKZF1;;chr9:117150254..117150271,-!p1@AKNA!1.65!114.35!AKNA;;chr10:51585449..51585487,+!p6@NCOA4!1.63!41.45!NCOA4;;chr2:231090433..231090469,+!p1@SP140!1.61!39.31!SP140;;chr1:25256756..25256774,-!p1@RUNX3!1.54!61.94!RUNX3;;chr3:141748010..141748030,-!p8@TFDP2!1.54!33.35!TFDP2;;chr3:63953435..63953499,+!p1@ATXN7!1.53!32.64!ATXN7;;chr17:37934365..37934387,-!p2@IKZF3!1.53!32.64!IKZF3;;chr2:148778973..148779035,+!p3@MBD5!1.51!78.62!MBD5;;chr19:50922187..50922204,+!p1@SPIB!1.51!31.21!SPIB;;chr2:100759010..100759035,-!p1@AFF3!1.50!30.49!AFF3;;chr6:391743..391759,+!p1@IRF4!1.49!29.78!IRF4;;chr20:56195474..56195506,-!p1@ZBP1!1.47!28.35!ZBP1;;chr5:133450365..133450444,+!p1@TCF7!1.46!121.74!TCF7;;chr11:111249993..111250006,-!p1@POU2AF1!1.46!28.11!POU2AF1;;chrY:21906594..21906622,-!p1@KDM5D!1.46!27.87!KDM5D;;chr3:27763807..27763822,-!p1@EOMES!1.45!26.92!EOMES;;chr2:192015701..192015743,-!p1@STAT4!1.43!35.50!STAT4;;chr11:47400062..47400077,-!p2@SPI1!1.43!25.73!SPI1;;chr19:13213511..13213545,-!p2@LYL1!1.41!26.92!LYL1;;chr21:34442439..34442455,+!p1@OLIG1!1.41!24.78!OLIG1;;chr12:54778471..54778528,-!p1@ZNF385A!1.40!24.06!ZNF385A;;chr20:50159198..50159299,-!p1@NFATC2!1.38!33.11!NFATC2;;chr2:68592394..68592405,+!p2@PLEK!1.37!22.63!PLEK;;chr7:28725715..28725727,+!p3@CREB5!1.36!25.97!CREB5;;chr11:47399996..47400014,-!p4@SPI1!1.36!22.16!SPI1;;chr2:231090471..231090504,+!p2@SP140!1.35!21.20!SP140;;chr19:12998003..12998021,-!p1@KLF1!1.34!20.96!KLF1;;chr3:187463179..187463201,-!p2@BCL6!1.33!82.90!BCL6;;chr2:192015750..192015793,-!p2@STAT4!1.33!27.16!STAT4;;chr4:185395633..185395651,-!p2@IRF2!1.30!30.49!IRF2;;chr6:144385698..144385742,-!p2@PLAGL1!1.30!23.11!PLAGL1;;chr19:16435625..16435682,+!p1@KLF2!1.29!573.19!KLF2;;chr10:111985713..111985774,+!p2@MXI1!1.29!171.77!MXI1;;chr10:51585430..51585448,+!p7@NCOA4!1.28!18.11!NCOA4;;chr7:50344251..50344288,+!p3@IKZF1!1.28!17.87!IKZF1;;chr3:71355163..71355209,-!p5@FOXP1!1.27!24.30!FOXP1;;chrX:48644984..48645005,+!p1@GATA1!1.25!16.68!GATA1;;chr12:54689552..54689574,-!p6@NFE2!1.25!16.68!NFE2;;chr11:47400045..47400060,-!p6@SPI1!1.24!16.44!SPI1;;chr2:100759037..100759058,-!p2@AFF3!1.24!16.20!AFF3;;chrX:106960285..106960299,-!p1@TSC22D3!1.23!422.15!TSC22D3;;chr11:128563948..128564003,+!p1@FLI1!1.23!190.35!FLI1;;chr13:41593425..41593480,-!p1@ELF1!1.23!100.53!ELF1;;chr11:47400032..47400043,-!p5@SPI1!1.22!15.72!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.22!15.49!SPI1;;chr3:71542615..71542644,-!p12@FOXP1!1.22!15.49!FOXP1;;chr6:106546808..106546833,+!p3@PRDM1!1.21!19.06!PRDM1;;chr7:28725740..28725778,+!p1@CREB5!1.19!127.69!CREB5;;chr2:70167296..70167306,+!p3@MXD1!1.19!22.16!MXD1;;chr14:75988771..75988826,+!p1@BATF!1.19!19.30!BATF;;chr7:50343895..50343936,+!p5@IKZF1!1.19!14.53!IKZF1;;chr5:88178983..88179012,-!p1@MEF2C!1.18!107.20!MEF2C;;chr3:18486354..18486377,-!p2@SATB1!1.18!17.63!SATB1;;chr17:38020392..38020477,-!p1@IKZF3!1.18!14.06!IKZF3;;chr2:208031943..208031978,-!p5@KLF7!1.17!18.34!KLF7;;chr6:91006518..91006570,-!p1@BACH2!1.16!30.73!BACH2;;chr5:176735063..176735088,-!p2@MXD3!1.16!13.34!MXD3;;chr16:3313791..3313834,+!p2@ZNF263!1.14!28.35!ZNF263;;chr4:106068026..106068084,+!p1@TET2!1.13!113.16!TET2;;chr15:60884706..60884743,-!p1@RORA!1.13!64.08!RORA;;chr11:128392273..128392308,-!p2@ETS1!1.13!52.65!ETS1;;chr4:185395191..185395226,-!p4@IRF2!1.13!17.63!IRF2;;chr5:133451347..133451358,+!p3@TCF7!1.13!12.39!TCF7;;chr1:47697965..47697991,-!p7@TAL1!1.13!12.39!TAL1;;chr21:36421535..36421610,-!p2@RUNX1!1.12!43.83!RUNX1;;chr16:88752889..88752921,-!p1@SNAI3!1.12!14.29!SNAI3;;chr4:109090075..109090095,-!p2@LEF1!1.12!12.15!LEF1;;chrX:131574281..131574293,-!p18@MBNL3!1.12!12.15!MBNL3;;chr10:111967345..111967422,+!p1@MXI1!1.11!191.54!MXI1;;chr5:142782823..142782854,-!p3@NR3C1!1.11!17.15!NR3C1;;chr5:131826457..131826514,-!p1@IRF1!1.09!446.21!IRF1;;chr12:54689532..54689551,-!p4@NFE2!1.09!11.20!NFE2;;chr1:8484007..8484061,-!p13@RERE!1.08!14.06!RERE;;chr17:38020557..38020572,-!p4@IKZF3!1.08!10.96!IKZF3;;chr19:13213662..13213686,-!p1@LYL1!1.07!15.96!LYL1;;chr9:135854091..135854159,+!p1@GFI1B!1.07!10.72!GFI1B;;chr20:56195525..56195556,-!p2@ZBP1!1.06!10.48!ZBP1;;chr7:115670804..115670825,-!p1@TFEC!1.06!10.48!TFEC;;chr7:50348268..50348366,+!p4@IKZF1!1.06!10.48!IKZF1;;chr10:51565239..51565263,+!p2@NCOA4!1.05!242.52!NCOA4;;chr2:145277640..145277771,-!p1@ZEB2!1.05!138.89!ZEB2;;chr2:70142189..70142223,+!p2@MXD1!1.05!74.09!MXD1;;chr17:17721569..17721574,-!p9@SREBF1!1.05!10.24!SREBF1;;chr12:53835425..53835437,+!p4@PRR13,p5@PCBP2!1.04!16.44!PCBP2;;chr1:43148855..43148908,+!p4@YBX1!1.04!15.72!YBX1;;chr4:185395590..185395627,-!p3@IRF2!1.04!12.39!IRF2;;chr17:38497662..38497713,+!p4@RARA!1.04!11.67!RARA;;chr12:54694738..54694749,-!p5@NFE2!1.04!10.01!NFE2;;chr7:149470641..149470694,-!p1@ZNF467!1.03!44.55!ZNF467;;chr10:8096631..8096660,+!p1@GATA3!1.03!11.67!GATA3;;chr6:106546731..106546755,+!p5@PRDM1!1.03!9.77!PRDM1;;chr1:23857325..23857416,-!p2@E2F2!1.02!11.20!E2F2;;chr19:19779619..19779670,+!p1@ZNF101!1.01!26.68!ZNF101;;chr17:38020516..38020544,-!p5@IKZF3!1.01!9.29!IKZF3;;chr12:10875831..10876025,-!p1@CSDA!1.00!759.01!CSDA;;chr3:18480217..18480239,-!p3@SATB1!1.00!9.05!SATB1;;chr10:8096772..8096787,+!p2@GATA3!0.99!10.48!GATA3;;chr2:231084659..231084721,-!p1@SP110!0.98!206.55!SP110;;chr1:26697243..26697258,-!p1@ZNF683!0.98!8.58!ZNF683;;chr2:60780607..60780624,-!p2@BCL11A!0.97!25.97!BCL11A;;chr9:37034186..37034216,-!p2@PAX5!0.97!8.34!PAX5;;chr12:54691711..54691725,-!p7@NFE2!0.96!8.10!NFE2;;chr3:71179699..71179744,-!p2@FOXP1!0.95!60.75!FOXP1;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!0.95!53.60!ZNF580;;chr3:141820622..141820635,-!p5@TFDP2!0.95!14.53!TFDP2;;chrY:2803415..2803468,+!p1@ZFY!0.95!7.86!ZFY;;chr9:137217986..137218049,+!p3@RXRA!0.94!22.63!RXRA;;chrX:106960180..106960197,-!p2@TSC22D3!0.92!29.30!TSC22D3;;chr19:42636586..42636607,-!p1@POU2F2!0.92!20.96!POU2F2;;chr9:32550965..32551031,-!p4@TOPORS!0.92!11.67!TOPORS;;chrX:107019163..107019179,-!p7@TSC22D3!0.92!8.58!TSC22D3;;chr1:47697881..47697910,-!p4@TAL1!0.92!7.39!TAL1;;chr21:34442540..34442560,+!p2@OLIG1!0.92!7.39!OLIG1;;chr7:137620650..137620677,-!p3@CREB3L2!0.92!7.39!CREB3L2;;chr9:117160738..117160782,-!p2@AKNA!0.91!30.73!AKNA;;chr5:88179017..88179046,-!p2@MEF2C!0.90!28.83!MEF2C;;chr7:149470540..149470596,-!p2@ZNF467!0.90!9.29!ZNF467;;chr4:109089573..109089585,-!p8@LEF1!0.90!6.91!LEF1;;chr1:47695003..47695042,-!p2@TAL1!0.90!6.91!TAL1;;chr1:92951607..92951661,-!p1@GFI1!0.90!6.91!GFI1;;chr9:117150303..117150312,-!p3@AKNA!0.89!8.81!AKNA;;chr11:128392085..128392232,-!p1@ETS1!0.87!228.94!ETS1;;chr2:28618532..28618610,+!p4@FOSL2!0.87!11.44!FOSL2;;chr3:71542651..71542683,-!p22@FOXP1!0.87!6.43!FOXP1;;chr4:109089901..109089930,-!p3@LEF1!0.87!6.43!LEF1;;chr16:89787937..89787971,+!p1@ZNF276!0.86!17.15!ZNF276;;chr17:37934204..37934241,-!p3@IKZF3!0.86!6.19!IKZF3;;chrY:21906761..21906810,-!p2@KDM5D!0.86!6.19!KDM5D;;chr20:52226313..52226350,-!p3@ZNF217!0.86!6.19!ZNF217;;chr2:100758991..100759009,-!p3@AFF3!0.86!6.19!AFF3;;chr9:88969339..88969422,-!p2@ZCCHC6!0.85!49.79!ZCCHC6;;chr16:79634624..79634642,-!p1@MAF!0.85!25.49!MAF;;chr17:38498402..38498445,+!p3@RARA!0.85!22.87!RARA;;chr4:57522166..57522260,-!p2@HOPX!0.85!7.15!HOPX;;chr4:38665769..38665801,+!p2@KLF3!0.84!57.65!KLF3;;chrX:101186981..101187030,-!p1@ZMAT1!0.84!20.49!ZMAT1;;chrX:49121165..49121179,-!p1@FOXP3!0.84!5.96!FOXP3;;chr5:158526756..158526797,-!p3@EBF1!0.84!5.96!EBF1;;chr6:108881012..108881034,+!p3@FOXO3!0.83!21.92!FOXO3;;chr17:38498594..38498661,+!p2@RARA!0.83!20.49!RARA;;chr6:135516877..135516900,+!p5@MYB!0.83!5.72!MYB;;chr6:15246200..15246214,+!p2@JARID2!0.82!16.44!JARID2;;chr8:60031619..60031676,-!p1@TOX!0.82!12.63!TOX;;chr14:64970670..64970712,-!p3@ZBTB25!0.82!12.63!ZBTB25;;chr10:31288398..31288455,-!p2@ZNF438!0.82!6.67!ZNF438;;chr9:3525727..3525828,-!p2@RFX3!0.81!14.77!RFX3;;chrX:107018836..107018862,-!p8@TSC22D3!0.81!5.48!TSC22D3;;chr14:65568389..65568408,-!p4@MAX!0.81!5.48!MAX;;chr19:13213555..13213568,-!p5@LYL1!0.81!5.48!LYL1;;chr21:36421147..36421193,-!p10@RUNX1!0.81!5.48!RUNX1;;chr1:61548225..61548299,+!p1@NFIA!0.80!75.76!NFIA;;chr16:68119324..68119364,+!p1@NFATC3!0.80!25.49!NFATC3;;chr1:10754477..10754517,-!p1@CASZ1!0.80!9.29!CASZ1;;chr2:113057415..113057477,+!p3@ZC3H6!0.80!7.15!ZC3H6;;chr2:60781201..60781258,-!p3@BCL11A!0.80!5.24!BCL11A;;chr19:45251395..45251432,+!p8@BCL3!0.80!5.24!BCL3;;chr12:6782377..6782382,-!p15@ZNF384!0.80!5.24!ZNF384;;chr8:71316021..71316068,-!p1@NCOA2!0.79!52.17!NCOA2;;chr2:208031542..208031595,-!p2@KLF7!0.79!39.31!KLF7;;chr3:18466787..18466839,-!p1@SATB1!0.79!24.78!SATB1;;chr14:65569101..65569119,-!p3@MAX!0.79!17.39!MAX;;chr19:19729477..19729542,-!p1@PBX4!0.79!11.67!PBX4;;chr6:45390300..45390335,+!p4@RUNX2!0.79!8.34!RUNX2;;chr19:38085768..38085821,+!p1@ZNF540!0.79!8.10!ZNF540;;chr19:53073532..53073551,+!p1@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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000178;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090325%252c%2520donation1.CNhs11075.12176-128I7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090325%252c%2520donation1.CNhs11075.12176-128I7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090325%252c%2520donation1.CNhs11075.12176-128I7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090325%252c%2520donation1.CNhs11075.12176-128I7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090325%252c%2520donation1.CNhs11075.12176-128I7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12176-128I7 | |id=FF:12176-128I7 | ||
|is_a=EFO:0002091;;FF:0000002;;FF:0000281 | |is_a=EFO:0002091;;FF:0000002;;FF:0000281 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11075 | |||
|library_id_phase_based=2:CNhs11075 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12176 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12176 | |||
|name=Whole blood (ribopure), donor090325, donation1 | |name=Whole blood (ribopure), donor090325, donation1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 43: | Line 61: | ||
|profile_cagescan=NCig10019,,, | |profile_cagescan=NCig10019,,, | ||
|profile_hcage=CNhs11075,LSID723,release008,COMPLETED | |profile_hcage=CNhs11075,LSID723,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=128 | |rna_box=128 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 58: | Line 79: | ||
|rna_weight_ug=5.9004 | |rna_weight_ug=5.9004 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 79: | Line 101: | ||
|top_motifs=GATA6:3.01579400363;ETS1,2:2.43030851762;FOXO1,3,4:2.3183075348;DMAP1_NCOR{1,2}_SMARC:2.31037050691;ELF1,2,4:2.22645511389;SPI1:2.19899136762;SPIB:2.19663025218;T:2.14189196974;FOXD3:2.1385831428;RUNX1..3:1.91380888239;FOX{D1,D2}:1.81604272595;NKX2-2,8:1.59081332413;FOX{F1,F2,J1}:1.53753921115;STAT5{A,B}:1.51532153876;CDX1,2,4:1.47139778774;FOXP3:1.44564720115;IKZF2:1.44428453183;FOXA2:1.36834265813;IRF7:1.36523705343;NANOG{mouse}:1.35300812099;IRF1,2:1.34138415539;TOPORS:1.3097026067;POU5F1:1.25997017138;STAT1,3:1.22951955022;TLX2:1.2171863635;SPZ1:1.17207817876;BPTF:1.11049549036;TGIF1:0.974032674346;FOXP1:0.942483655044;CEBPA,B_DDIT3:0.936684308839;FOX{I1,J2}:0.929775868789;ALX1:0.91071332144;TFAP4:0.879700836537;PITX1..3:0.812348452172;FOXN1:0.799849722649;HOXA9_MEIS1:0.779271433855;POU2F1..3:0.773454644288;EP300:0.772516038376;PDX1:0.750785436077;OCT4_SOX2{dimer}:0.67965359779;SREBF1,2:0.659750915607;NKX3-1:0.656557661281;HBP1_HMGB_SSRP1_UBTF:0.604096439056;SMAD1..7,9:0.559473149029;NFE2L2:0.558797325298;PAX3,7:0.549013613696;NFATC1..3:0.458025286903;ZNF148:0.450898814024;EVI1:0.445373293194;MYFfamily:0.435501787379;ZEB1:0.416079427177;RXRA_VDR{dimer}:0.397709811782;HMX1:0.393672611932;STAT2,4,6:0.350850721575;NKX2-1,4:0.347574517425;CRX:0.347556668151;FOXQ1:0.347457369928;PAX2:0.331519012994;HMGA1,2:0.298111481565;DBP:0.249672767222;MYOD1:0.246388196584;ZNF423:0.221388434293;RBPJ:0.220730730851;RREB1:0.201152905966;RFX2..5_RFXANK_RFXAP:0.201048518635;SNAI1..3:0.194808768744;NKX6-1,2:0.15637632306;NFIL3:0.138703177061;MZF1:0.134925396503;ZBTB16:0.116586531842;TFCP2:0.114127289225;RORA:0.104660869584;BREu{core}:0.0981422852319;CUX2:0.077537327292;LMO2:0.0712847264938;NFKB1_REL_RELA:0.0278379354809;AIRE:0.00838623091158;ATF5_CREB3:-0.018079867727;NR1H4:-0.032207663101;TAL1_TCF{3,4,12}:-0.0969414948274;POU1F1:-0.111047361611;GATA4:-0.116830549402;HLF:-0.119445236898;MYB:-0.132408208316;ELK1,4_GABP{A,B1}:-0.139624284367;MAZ:-0.154556125929;NKX3-2:-0.172301187585;XCPE1{core}:-0.175818970089;ZNF238:-0.184102835968;VSX1,2:-0.208405598875;CREB1:-0.214920110062;GLI1..3:-0.24273903861;NFIX:-0.286412718068;ADNP_IRX_SIX_ZHX:-0.300811954882;PPARG:-0.312691100996;ZNF143:-0.344829741287;NR6A1:-0.360499057457;NFE2L1:-0.395979728959;NFE2:-0.40797953547;ATF2:-0.408787470346;PRRX1,2:-0.437714131621;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.438976649719;SOX5:-0.441321043004;POU6F1:-0.450039487732;HNF4A_NR2F1,2:-0.463670929339;NHLH1,2:-0.473673927573;YY1:-0.480834033528;SRF:-0.484481897323;ZFP161:-0.492968761256;SP1:-0.50661276305;NRF1:-0.506617993828;PRDM1:-0.508724302098;LEF1_TCF7_TCF7L1,2:-0.523939212126;HES1:-0.534735805083;NR3C1:-0.555113404488;AR:-0.56530241787;BACH2:-0.579250504767;HNF1A:-0.601350136133;PAX6:-0.621185139533;REST:-0.626573511928;FOSL2:-0.627308904638;KLF4:-0.641606936092;ALX4:-0.651060920723;PATZ1:-0.690905243206;MAFB:-0.717147621256;FOS_FOS{B,L1}_JUN{B,D}:-0.71751225376;EGR1..3:-0.719138001281;TBX4,5:-0.736670877965;MTF1:-0.7394082686;NFY{A,B,C}:-0.783367425972;RFX1:-0.802491063908;ZNF384:-0.813183164637;LHX3,4:-0.817269152587;GCM1,2:-0.830535564119;FOXL1:-0.841278951483;NKX2-3_NKX2-5:-0.85390343493;ATF4:-0.854829072752;GTF2I:-0.858071941889;MTE{core}:-0.859925410343;NANOG:-0.888141427678;NR5A1,2:-0.889451650795;ARID5B:-0.897761734418;HOX{A6,A7,B6,B7}:-0.921301059441;MEF2{A,B,C,D}:-0.92331461509;PBX1:-0.927341834782;HIF1A:-0.928442544676;TFAP2B:-0.930035525943;MED-1{core}:-0.942698513825;E2F1..5:-0.945983390551;JUN:-0.962833544386;SOX2:-1.01817473187;HIC1:-1.0269433731;AHR_ARNT_ARNT2:-1.04833148032;ESR1:-1.08839970206;PAX5:-1.1363562353;MYBL2:-1.14968421436;SOX{8,9,10}:-1.15372626732;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.18402947474;TFAP2{A,C}:-1.2023109144;PAX4:-1.21756440338;GZF1:-1.28541576838;TLX1..3_NFIC{dimer}:-1.29436817751;GFI1:-1.30166663653;EN1,2:-1.3104033434;EBF1:-1.31301467142;RXR{A,B,G}:-1.36256178749;HAND1,2:-1.36720041014;ZBTB6:-1.39682726631;GTF2A1,2:-1.40128417595;UFEwm:-1.40271645127;TBP:-1.4283732085;GFI1B:-1.47627571875;ONECUT1,2:-1.48734557428;FOXM1:-1.50832079286;POU3F1..4:-1.51597621855;CDC5L:-1.56546335106;HSF1,2:-1.57433288868;TP53:-1.62271870626;XBP1:-1.65967688306;ATF6:-1.66156663685;TEAD1:-1.68920619387;bHLH_family:-1.81316813811;TEF:-1.86326707664;TFDP1:-1.89560227981;ZIC1..3:-1.8980620076;PAX1,9:-1.94898776303;PAX8:-2.00735223685;HOX{A5,B5}:-2.05871221459;HOX{A4,D4}:-2.08102656786;SOX17:-2.13121940999;ESRRA:-2.47828909443;IKZF1:-2.92520229591 | |top_motifs=GATA6:3.01579400363;ETS1,2:2.43030851762;FOXO1,3,4:2.3183075348;DMAP1_NCOR{1,2}_SMARC:2.31037050691;ELF1,2,4:2.22645511389;SPI1:2.19899136762;SPIB:2.19663025218;T:2.14189196974;FOXD3:2.1385831428;RUNX1..3:1.91380888239;FOX{D1,D2}:1.81604272595;NKX2-2,8:1.59081332413;FOX{F1,F2,J1}:1.53753921115;STAT5{A,B}:1.51532153876;CDX1,2,4:1.47139778774;FOXP3:1.44564720115;IKZF2:1.44428453183;FOXA2:1.36834265813;IRF7:1.36523705343;NANOG{mouse}:1.35300812099;IRF1,2:1.34138415539;TOPORS:1.3097026067;POU5F1:1.25997017138;STAT1,3:1.22951955022;TLX2:1.2171863635;SPZ1:1.17207817876;BPTF:1.11049549036;TGIF1:0.974032674346;FOXP1:0.942483655044;CEBPA,B_DDIT3:0.936684308839;FOX{I1,J2}:0.929775868789;ALX1:0.91071332144;TFAP4:0.879700836537;PITX1..3:0.812348452172;FOXN1:0.799849722649;HOXA9_MEIS1:0.779271433855;POU2F1..3:0.773454644288;EP300:0.772516038376;PDX1:0.750785436077;OCT4_SOX2{dimer}:0.67965359779;SREBF1,2:0.659750915607;NKX3-1:0.656557661281;HBP1_HMGB_SSRP1_UBTF:0.604096439056;SMAD1..7,9:0.559473149029;NFE2L2:0.558797325298;PAX3,7:0.549013613696;NFATC1..3:0.458025286903;ZNF148:0.450898814024;EVI1:0.445373293194;MYFfamily:0.435501787379;ZEB1:0.416079427177;RXRA_VDR{dimer}:0.397709811782;HMX1:0.393672611932;STAT2,4,6:0.350850721575;NKX2-1,4:0.347574517425;CRX:0.347556668151;FOXQ1:0.347457369928;PAX2:0.331519012994;HMGA1,2:0.298111481565;DBP:0.249672767222;MYOD1:0.246388196584;ZNF423:0.221388434293;RBPJ:0.220730730851;RREB1:0.201152905966;RFX2..5_RFXANK_RFXAP:0.201048518635;SNAI1..3:0.194808768744;NKX6-1,2:0.15637632306;NFIL3:0.138703177061;MZF1:0.134925396503;ZBTB16:0.116586531842;TFCP2:0.114127289225;RORA:0.104660869584;BREu{core}:0.0981422852319;CUX2:0.077537327292;LMO2:0.0712847264938;NFKB1_REL_RELA:0.0278379354809;AIRE:0.00838623091158;ATF5_CREB3:-0.018079867727;NR1H4:-0.032207663101;TAL1_TCF{3,4,12}:-0.0969414948274;POU1F1:-0.111047361611;GATA4:-0.116830549402;HLF:-0.119445236898;MYB:-0.132408208316;ELK1,4_GABP{A,B1}:-0.139624284367;MAZ:-0.154556125929;NKX3-2:-0.172301187585;XCPE1{core}:-0.175818970089;ZNF238:-0.184102835968;VSX1,2:-0.208405598875;CREB1:-0.214920110062;GLI1..3:-0.24273903861;NFIX:-0.286412718068;ADNP_IRX_SIX_ZHX:-0.300811954882;PPARG:-0.312691100996;ZNF143:-0.344829741287;NR6A1:-0.360499057457;NFE2L1:-0.395979728959;NFE2:-0.40797953547;ATF2:-0.408787470346;PRRX1,2:-0.437714131621;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.438976649719;SOX5:-0.441321043004;POU6F1:-0.450039487732;HNF4A_NR2F1,2:-0.463670929339;NHLH1,2:-0.473673927573;YY1:-0.480834033528;SRF:-0.484481897323;ZFP161:-0.492968761256;SP1:-0.50661276305;NRF1:-0.506617993828;PRDM1:-0.508724302098;LEF1_TCF7_TCF7L1,2:-0.523939212126;HES1:-0.534735805083;NR3C1:-0.555113404488;AR:-0.56530241787;BACH2:-0.579250504767;HNF1A:-0.601350136133;PAX6:-0.621185139533;REST:-0.626573511928;FOSL2:-0.627308904638;KLF4:-0.641606936092;ALX4:-0.651060920723;PATZ1:-0.690905243206;MAFB:-0.717147621256;FOS_FOS{B,L1}_JUN{B,D}:-0.71751225376;EGR1..3:-0.719138001281;TBX4,5:-0.736670877965;MTF1:-0.7394082686;NFY{A,B,C}:-0.783367425972;RFX1:-0.802491063908;ZNF384:-0.813183164637;LHX3,4:-0.817269152587;GCM1,2:-0.830535564119;FOXL1:-0.841278951483;NKX2-3_NKX2-5:-0.85390343493;ATF4:-0.854829072752;GTF2I:-0.858071941889;MTE{core}:-0.859925410343;NANOG:-0.888141427678;NR5A1,2:-0.889451650795;ARID5B:-0.897761734418;HOX{A6,A7,B6,B7}:-0.921301059441;MEF2{A,B,C,D}:-0.92331461509;PBX1:-0.927341834782;HIF1A:-0.928442544676;TFAP2B:-0.930035525943;MED-1{core}:-0.942698513825;E2F1..5:-0.945983390551;JUN:-0.962833544386;SOX2:-1.01817473187;HIC1:-1.0269433731;AHR_ARNT_ARNT2:-1.04833148032;ESR1:-1.08839970206;PAX5:-1.1363562353;MYBL2:-1.14968421436;SOX{8,9,10}:-1.15372626732;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.18402947474;TFAP2{A,C}:-1.2023109144;PAX4:-1.21756440338;GZF1:-1.28541576838;TLX1..3_NFIC{dimer}:-1.29436817751;GFI1:-1.30166663653;EN1,2:-1.3104033434;EBF1:-1.31301467142;RXR{A,B,G}:-1.36256178749;HAND1,2:-1.36720041014;ZBTB6:-1.39682726631;GTF2A1,2:-1.40128417595;UFEwm:-1.40271645127;TBP:-1.4283732085;GFI1B:-1.47627571875;ONECUT1,2:-1.48734557428;FOXM1:-1.50832079286;POU3F1..4:-1.51597621855;CDC5L:-1.56546335106;HSF1,2:-1.57433288868;TP53:-1.62271870626;XBP1:-1.65967688306;ATF6:-1.66156663685;TEAD1:-1.68920619387;bHLH_family:-1.81316813811;TEF:-1.86326707664;TFDP1:-1.89560227981;ZIC1..3:-1.8980620076;PAX1,9:-1.94898776303;PAX8:-2.00735223685;HOX{A5,B5}:-2.05871221459;HOX{A4,D4}:-2.08102656786;SOX17:-2.13121940999;ESRRA:-2.47828909443;IKZF1:-2.92520229591 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12176-128I7;search_select_hide=table117:FF:12176-128I7 | |||
}} | }} | ||
Latest revision as of 18:32, 4 June 2020
| Name: | Whole blood (ribopure), donor090325, donation1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11075 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| HumanCAGEScan Download raw sequence, BAM & CTSS | ||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11075
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11075
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.162 |
| 10 | 10 | 0.0355 |
| 100 | 100 | 0.72 |
| 101 | 101 | 0.203 |
| 102 | 102 | 0.84 |
| 103 | 103 | 0.263 |
| 104 | 104 | 0.64 |
| 105 | 105 | 0.21 |
| 106 | 106 | 0.0809 |
| 107 | 107 | 0.737 |
| 108 | 108 | 0.81 |
| 109 | 109 | 0.138 |
| 11 | 11 | 0.105 |
| 110 | 110 | 0.386 |
| 111 | 111 | 0.26 |
| 112 | 112 | 0.185 |
| 113 | 113 | 0.142 |
| 114 | 114 | 0.0952 |
| 115 | 115 | 0.276 |
| 116 | 116 | 0.806 |
| 117 | 117 | 0.016 |
| 118 | 118 | 0.472 |
| 119 | 119 | 0.392 |
| 12 | 12 | 0.63 |
| 120 | 120 | 0.576 |
| 121 | 121 | 0.817 |
| 122 | 122 | 0.421 |
| 123 | 123 | 0.00626 |
| 124 | 124 | 0.115 |
| 125 | 125 | 0.172 |
| 126 | 126 | 0.329 |
| 127 | 127 | 0.409 |
| 128 | 128 | 0.0724 |
| 129 | 129 | 0.561 |
| 13 | 13 | 0.802 |
| 130 | 130 | 0.544 |
| 131 | 131 | 0.783 |
| 132 | 132 | 0.589 |
| 133 | 133 | 0.686 |
| 134 | 134 | 0.93 |
| 135 | 135 | 0.436 |
| 136 | 136 | 0.919 |
| 137 | 137 | 0.0105 |
| 138 | 138 | 0.0883 |
| 139 | 139 | 0.0326 |
| 14 | 14 | 0.15 |
| 140 | 140 | 0.939 |
| 141 | 141 | 0.41 |
| 142 | 142 | 0.652 |
| 143 | 143 | 0.00311 |
| 144 | 144 | 0.65 |
| 145 | 145 | 0.195 |
| 146 | 146 | 0.705 |
| 147 | 147 | 0.0672 |
| 148 | 148 | 0.164 |
| 149 | 149 | 0.436 |
| 15 | 15 | 0.0807 |
| 150 | 150 | 0.97 |
| 151 | 151 | 0.21 |
| 152 | 152 | 0.621 |
| 153 | 153 | 0.595 |
| 154 | 154 | 0.78 |
| 155 | 155 | 0.178 |
| 156 | 156 | 0.695 |
| 157 | 157 | 0.14 |
| 158 | 158 | 0.271 |
| 159 | 159 | 0.152 |
| 16 | 16 | 0.545 |
| 160 | 160 | 0.617 |
| 161 | 161 | 0.242 |
| 162 | 162 | 0.69 |
| 163 | 163 | 0.378 |
| 164 | 164 | 0.235 |
| 165 | 165 | 0.0704 |
| 166 | 166 | 0.845 |
| 167 | 167 | 0.809 |
| 168 | 168 | 0.104 |
| 169 | 169 | 0.0271 |
| 17 | 17 | 0.512 |
| 18 | 18 | 0.615 |
| 19 | 19 | 0.468 |
| 2 | 2 | 0.304 |
| 20 | 20 | 0.698 |
| 21 | 21 | 0.34 |
| 22 | 22 | 0.348 |
| 23 | 23 | 0.22 |
| 24 | 24 | 0.103 |
| 25 | 25 | 0.224 |
| 26 | 26 | 0.238 |
| 27 | 27 | 0.0801 |
| 28 | 28 | 0.453 |
| 29 | 29 | 0.374 |
| 3 | 3 | 0.0573 |
| 30 | 30 | 0.667 |
| 31 | 31 | 0.614 |
| 32 | 32 | 0.411 |
| 33 | 33 | 0.726 |
| 34 | 34 | 0.297 |
| 35 | 35 | 0.168 |
| 36 | 36 | 0.251 |
| 37 | 37 | 0.178 |
| 38 | 38 | 0.405 |
| 39 | 39 | 0.986 |
| 4 | 4 | 0.765 |
| 40 | 40 | 0.444 |
| 41 | 41 | 0.193 |
| 42 | 42 | 0.17 |
| 43 | 43 | 0.193 |
| 44 | 44 | 0.362 |
| 45 | 45 | 0.636 |
| 46 | 46 | 0.139 |
| 47 | 47 | 0.16 |
| 48 | 48 | 0.257 |
| 49 | 49 | 0.113 |
| 5 | 5 | 0.23 |
| 50 | 50 | 0.994 |
| 51 | 51 | 0.489 |
| 52 | 52 | 0.637 |
| 53 | 53 | 0.0502 |
| 54 | 54 | 0.357 |
| 55 | 55 | 0.0568 |
| 56 | 56 | 0.261 |
| 57 | 57 | 0.504 |
| 58 | 58 | 0.0579 |
| 59 | 59 | 0.121 |
| 6 | 6 | 0.769 |
| 60 | 60 | 0.12 |
| 61 | 61 | 0.223 |
| 62 | 62 | 0.0225 |
| 63 | 63 | 0.528 |
| 64 | 64 | 0.38 |
| 65 | 65 | 0.253 |
| 66 | 66 | 0.533 |
| 67 | 67 | 0.395 |
| 68 | 68 | 0.448 |
| 69 | 69 | 0.512 |
| 7 | 7 | 0.196 |
| 70 | 70 | 0.0612 |
| 71 | 71 | 0.093 |
| 72 | 72 | 0.195 |
| 73 | 73 | 0.413 |
| 74 | 74 | 0.609 |
| 75 | 75 | 0.0774 |
| 76 | 76 | 0.252 |
| 77 | 77 | 0.705 |
| 78 | 78 | 0.302 |
| 79 | 79 | 0.934 |
| 8 | 8 | 0.454 |
| 80 | 80 | 0.0225 |
| 81 | 81 | 0.263 |
| 82 | 82 | 0.0186 |
| 83 | 83 | 0.846 |
| 84 | 84 | 0.215 |
| 85 | 85 | 0.341 |
| 86 | 86 | 0.125 |
| 87 | 87 | 0.673 |
| 88 | 88 | 0.56 |
| 89 | 89 | 0.619 |
| 9 | 9 | 0.3 |
| 90 | 90 | 0.0154 |
| 91 | 91 | 0.334 |
| 92 | 92 | 0.0962 |
| 93 | 93 | 0.366 |
| 94 | 94 | 0.114 |
| 95 | 95 | 0.36 |
| 96 | 96 | 0.133 |
| 97 | 97 | 0.656 |
| 98 | 98 | 0.083 |
| 99 | 99 | 0.369 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11075
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000281 human whole blood sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000178 (blood)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0010053 (human blood - adult sample)
0000004 (tissue sample)
0000281 (human whole blood sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
