FFCP PHASE1:Hg19::chr19:56111680..56111716,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:56111680..56111716,+
|short_description=p1@ZNF524
|description=CAGE_peak_1_at_ZNF524_5end
|association_with_transcript=-13bp_to_ENST00000301073,NM_153219,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147807 | |EntrezGene=147807 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28322 | |HGNC=28322 | ||
|TSSclassifier=strong | |||
|UniProt=Q96C55 | |UniProt=Q96C55 | ||
|association_with_transcript=-13bp_to_ENST00000301073,NM_153219,uc002qlk.1_5end | |||
|cluster_id=chr19:56111680..56111716,+ | |||
|description=CAGE_peak_1_at_ZNF524_5end | |||
|id=chr19:56111680..56111716,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.13e-13!42;CL:0002194!1.04e-11!63;CL:0000576!1.04e-11!63;CL:0000040!1.04e-11!63;CL:0000559!1.04e-11!63;CL:0000839!1.21e-11!70;CL:0002009!2.68e-11!65;CL:0000766!3.58e-11!76;CL:0000860!7.80e-11!45;CL:0000557!1.00e-10!71;CL:0002031!6.07e-08!124;CL:0002087!1.06e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.03e-08;48!CL:0000473;3.20e-08;39!CL:0000234;3.20e-08;39!CL:0000860;5.49e-08;33!CL:0002057;5.49e-08;33!CL:0000766;4.70e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.64e-14,48;CL:0000234,2.64e-14,48;CL:0002194,6.88e-14,59;CL:0000576,6.88e-14,59;CL:0000040,6.88e-14,59;CL:0000559,6.88e-14,59;CL:0000839,9.66e-14,66;CL:0002009,2.24e-13,61;CL:0000766,3.02e-13,72;CL:0000860,4.88e-13,42;CL:0002057,4.88e-13,42;CL:0000557,9.30e-13,67;CL:0002031,3.99e-09,120;CL:0002087,7.73e-09,115;CL:0000738,2.20e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.40e-12!216;UBERON:0002371!2.12e-09!80;UBERON:0000926!4.36e-08!448;UBERON:0004120!4.36e-08!448;UBERON:0006603!4.36e-08!448;UBERON:0002193!6.16e-08!112;UBERON:0002405!6.47e-08!115;UBERON:0002390!9.69e-08!102;UBERON:0003061!9.69e-08!102;UBERON:0001474!2.83e-07!86;UBERON:0002204!4.49e-07!167;UBERON:0004765!8.16e-07!101;UBERON:0001434!8.16e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.75e-13,203;UBERON:0002371,3.52e-11,76;UBERON:0002405,5.78e-11,93;UBERON:0000926,5.71e-10,315;UBERON:0004120,5.71e-10,315;UBERON:0006603,5.71e-10,315;UBERON:0004765,2.36e-09,90;UBERON:0002193,3.48e-09,108;UBERON:0002390,4.90e-09,98;UBERON:0003061,4.90e-09,98;UBERON:0002204,5.92e-09,167;UBERON:0001434,7.90e-09,100;UBERON:0001474,1.09e-08,82 | |||
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| ||
|short_description=p1@ZNF524 | |||
}} | }} |
Latest revision as of 02:45, 20 September 2015
Short description: | p1@ZNF524 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF524_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000301073, NM_153219, uc002qlk.1_5end |
EntrezGene: | ZNF524 |
HGNC: | 28322 |
UniProt: | Q96C55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.64e-14 | 48 |
phagocyte | 2.64e-14 | 48 |
monopoietic cell | 6.88e-14 | 59 |
monocyte | 6.88e-14 | 59 |
monoblast | 6.88e-14 | 59 |
promonocyte | 6.88e-14 | 59 |
myeloid lineage restricted progenitor cell | 9.66e-14 | 66 |
macrophage dendritic cell progenitor | 2.24e-13 | 61 |
myeloid leukocyte | 3.02e-13 | 72 |
classical monocyte | 4.88e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.88e-13 | 42 |
granulocyte monocyte progenitor cell | 9.30e-13 | 67 |
hematopoietic lineage restricted progenitor cell | 3.99e-09 | 120 |
nongranular leukocyte | 7.73e-09 | 115 |
leukocyte | 2.20e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.75e-13 | 203 |
bone marrow | 3.52e-11 | 76 |
immune system | 5.78e-11 | 93 |
mesoderm | 5.71e-10 | 315 |
mesoderm-derived structure | 5.71e-10 | 315 |
presumptive mesoderm | 5.71e-10 | 315 |
skeletal element | 2.36e-09 | 90 |
hemolymphoid system | 3.48e-09 | 108 |
hematopoietic system | 4.90e-09 | 98 |
blood island | 4.90e-09 | 98 |
musculoskeletal system | 5.92e-09 | 167 |
skeletal system | 7.90e-09 | 100 |
bone element | 1.09e-08 | 82 |