FFCP PHASE1:Hg19::chr17:65418360..65418377,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:65418360..65418377,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr17:65418360..65418377,+ | |description=CAGE_peak_at_chr17:65418360..65418377,+ | ||
|id=chr17:65418360..65418377,+ | |id=chr17:65418360..65418377,+ | ||
|ontology_enrichment_celltype=CL:0000860;8.51e-46;33!CL:0002057;8.51e-46;33!CL:0000473;6.38e-33;39!CL:0000234;6.38e-33;39!CL:0000576;5.87e-27;48!CL:0000766;3.72e-15;69!CL:0000228;1.07e-11;1!CL:0002372;1.07e-11;1!CL:0000763;3.10e-08;100!CL:0002087;6.39e-08;104 | |ontology_enrichment_celltype=CL:0002057!7.89e-30!42;CL:0000860!2.52e-29!45;CL:0000766!4.23e-19!76;CL:0002194!4.05e-18!63;CL:0000576!4.05e-18!63;CL:0000040!4.05e-18!63;CL:0000559!4.05e-18!63;CL:0002009!2.53e-17!65;CL:0000839!8.01e-17!70;CL:0000557!1.79e-16!71;CL:0000738!7.10e-11!140;CL:0002087!1.05e-10!119;CL:0000763!3.30e-10!112;CL:0000049!3.30e-10!112;CL:0002031!4.51e-09!124;CL:0000767!2.81e-07!3;CL:0000037!3.80e-07!172;CL:0000566!3.80e-07!172 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;8.51e-46;33!CL:0002057;8.51e-46;33!CL:0000473;6.38e-33;39!CL:0000234;6.38e-33;39!CL:0000576;5.87e-27;48!CL:0000766;3.72e-15;69!CL:0000228;1.07e-11;1!CL:0002372;1.07e-11;1!CL:0000763;3.10e-08;100!CL:0002087;6.39e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.26e-47,42;CL:0002057,4.26e-47,42;CL:0000473,5.61e-41,48;CL:0000234,5.61e-41,48;CL:0002194,2.11e-32,59;CL:0000576,2.11e-32,59;CL:0000040,2.11e-32,59;CL:0000559,2.11e-32,59;CL:0002009,2.70e-31,61;CL:0000839,8.16e-29,66;CL:0000557,2.31e-28,67;CL:0000766,2.76e-26,72;CL:0000763,6.13e-17,108;CL:0000049,6.13e-17,108;CL:0002087,8.59e-16,115;CL:0002031,4.70e-15,120;CL:0000738,4.73e-13,136;CL:0000228,8.64e-12,1;CL:0002372,8.64e-12,1;CL:0002032,1.04e-10,161;CL:0000837,1.04e-10,161;CL:0000037,3.54e-10,168;CL:0000988,1.49e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.60e-35;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.35e-16!102;UBERON:0003061!4.35e-16!102;UBERON:0002371!5.69e-15!80;UBERON:0002193!8.68e-14!112;UBERON:0001474!2.30e-13!86;UBERON:0002405!4.69e-12!115;UBERON:0004765!4.41e-11!101;UBERON:0001434!4.41e-11!101;UBERON:0002204!1.62e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.11e-25,76;UBERON:0001474,7.02e-23,82;UBERON:0004765,1.08e-20,90;UBERON:0002405,5.74e-20,93;UBERON:0002390,7.41e-19,98;UBERON:0003061,7.41e-19,98;UBERON:0001434,1.92e-18,100;UBERON:0002193,6.13e-17,108;UBERON:0002204,6.00e-12,167;UBERON:0003081,2.04e-09,203;UBERON:0000926,3.36e-07,315;UBERON:0004120,3.36e-07,315;UBERON:0006603,3.36e-07,315 | |||
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| ||
|short_description=p@chr17:65418360..65418377,+ | |short_description=p@chr17:65418360..65418377,+ | ||
}} | }} |
Latest revision as of 20:06, 25 July 2015
Short description: | p@chr17:65418360..65418377, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:65418360..65418377, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.26e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.26e-47 | 42 |
defensive cell | 5.61e-41 | 48 |
phagocyte | 5.61e-41 | 48 |
monopoietic cell | 2.11e-32 | 59 |
monocyte | 2.11e-32 | 59 |
monoblast | 2.11e-32 | 59 |
promonocyte | 2.11e-32 | 59 |
macrophage dendritic cell progenitor | 2.70e-31 | 61 |
myeloid lineage restricted progenitor cell | 8.16e-29 | 66 |
granulocyte monocyte progenitor cell | 2.31e-28 | 67 |
myeloid leukocyte | 2.76e-26 | 72 |
myeloid cell | 6.13e-17 | 108 |
common myeloid progenitor | 6.13e-17 | 108 |
nongranular leukocyte | 8.59e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.70e-15 | 120 |
leukocyte | 4.73e-13 | 136 |
multinucleate cell | 8.64e-12 | 1 |
myotube | 8.64e-12 | 1 |
hematopoietic oligopotent progenitor cell | 1.04e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.04e-10 | 161 |
hematopoietic stem cell | 3.54e-10 | 168 |
hematopoietic cell | 1.49e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.11e-25 | 76 |
bone element | 7.02e-23 | 82 |
skeletal element | 1.08e-20 | 90 |
immune system | 5.74e-20 | 93 |
hematopoietic system | 7.41e-19 | 98 |
blood island | 7.41e-19 | 98 |
skeletal system | 1.92e-18 | 100 |
hemolymphoid system | 6.13e-17 | 108 |
musculoskeletal system | 6.00e-12 | 167 |
lateral plate mesoderm | 2.04e-09 | 203 |
mesoderm | 3.36e-07 | 315 |
mesoderm-derived structure | 3.36e-07 | 315 |
presumptive mesoderm | 3.36e-07 | 315 |