FFCP PHASE1:Hg19::chr13:46742630..46742701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TBN3 | |UniProt=Q5TBN3 | ||
|association_with_transcript=0bp_to_ENST00000416500,uc001vaz.3_5end | |association_with_transcript=0bp_to_ENST00000416500,uc001vaz.3_5end | ||
|cluster_id=chr13:46742630..46742701,- | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_3_at_LCP1_5end | |description=CAGE_peak_3_at_LCP1_5end | ||
|id=chr13:46742630..46742701,- | |id=chr13:46742630..46742701,- | ||
|ontology_enrichment_celltype=CL:0000576;3.30e-28;48!CL:0000860;2.66e-27;33!CL:0002057;2.66e-27;33!CL:0000473;3.95e-27;39!CL:0000234;3.95e-27;39!CL:0000766;4.59e-26;69!CL:0000738;8.52e-15;136!CL:0000763;1.08e-14;100!CL:0002087;2.67e-14;104!CL:0000451;1.44e-11;10!CL:0000988;2.37e-11;177!CL:0000990;1.09e-10;8!CL:0000094;3.29e-09;8!CL:0000219;3.33e-09;193!CL:0002393;3.99e-08;6!CL:0002397;3.99e-08;6!CL:0000081;6.50e-08;11!CL:0000453;2.28e-07;5!CL:0000840;3.47e-07;5 | |ontology_enrichment_celltype=CL:0000738!3.23e-51!140;CL:0000037!3.97e-45!172;CL:0000566!3.97e-45!172;CL:0000988!8.75e-44!182;CL:0000766!8.60e-43!76;CL:0002032!1.26e-42!165;CL:0000837!1.26e-42!165;CL:0002087!4.18e-39!119;CL:0002031!4.22e-39!124;CL:0000557!1.34e-37!71;CL:0000763!9.68e-37!112;CL:0000049!9.68e-37!112;CL:0002009!1.08e-36!65;CL:0002194!4.45e-35!63;CL:0000576!4.45e-35!63;CL:0000040!4.45e-35!63;CL:0000559!4.45e-35!63;CL:0000839!5.51e-35!70;CL:0002057!3.53e-28!42;CL:0000860!1.78e-25!45;CL:0000134!2.33e-14!358;CL:0002320!5.62e-13!365;CL:0000219!5.14e-11!390;CL:0000048!3.80e-10!430;CL:0000034!8.90e-10!444;CL:0000723!1.76e-09!436;CL:0000451!1.71e-08!10;CL:0002393!2.88e-08!9;CL:0002397!2.88e-08!9;CL:0000990!6.72e-08!8;CL:0000094!6.98e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000576;3.30e-28;48!CL:0000860;2.66e-27;33!CL:0002057;2.66e-27;33!CL:0000473;3.95e-27;39!CL:0000234;3.95e-27;39!CL:0000766;4.59e-26;69!CL:0000738;8.52e-15;136!CL:0000763;1.08e-14;100!CL:0002087;2.67e-14;104!CL:0000451;1.44e-11;10!CL:0000988;2.37e-11;177!CL:0000990;1.09e-10;8!CL:0000094;3.29e-09;8!CL:0000219;3.33e-09;193!CL:0002393;3.99e-08;6!CL:0002397;3.99e-08;6!CL:0000081;6.50e-08;11!CL:0000453;2.28e-07;5!CL:0000840;3.47e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.46e-69,136;CL:0000766,1.62e-63,72;CL:0000037,7.06e-63,168;CL:0000988,1.95e-62,177;CL:0002032,5.05e-59,161;CL:0000837,5.05e-59,161;CL:0000763,1.92e-56,108;CL:0000049,1.92e-56,108;CL:0000557,2.92e-56,67;CL:0002009,3.70e-56,61;CL:0002194,8.72e-54,59;CL:0000576,8.72e-54,59;CL:0000040,8.72e-54,59;CL:0000559,8.72e-54,59;CL:0000839,1.04e-52,66;CL:0002087,2.46e-52,115;CL:0002031,6.35e-52,120;CL:0000473,4.22e-45,48;CL:0000234,4.22e-45,48;CL:0000860,7.64e-40,42;CL:0002057,7.64e-40,42;CL:0000134,3.92e-20,354;CL:0002320,5.92e-19,361;CL:0000219,7.21e-17,386;CL:0000048,7.41e-13,427;CL:0000723,3.81e-12,433;CL:0000034,4.17e-12,441;CL:0000451,1.63e-11,10;CL:0002393,3.43e-11,9;CL:0002397,3.43e-11,9;CL:0000990,1.15e-10,8;CL:0000094,3.28e-09,8;CL:0000081,6.49e-08,11;CL:0000453,2.28e-07,5;CL:0000840,3.67e-07,5;CL:0001029,3.67e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-28;42!CL:0000049;3.51e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;2.37e-12;15!UBERON:0000179;2.37e-12;15!UBERON:0000463;2.37e-12;15!UBERON:0002390;5.36e-09;32 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.13e-43!102;UBERON:0003061!8.13e-43!102;UBERON:0002193!1.82e-37!112;UBERON:0002371!2.23e-31!80;UBERON:0001474!8.29e-27!86;UBERON:0002405!3.45e-23!115;UBERON:0004765!8.35e-20!101;UBERON:0001434!8.35e-20!101;UBERON:0002384!1.42e-12!375;UBERON:0003081!1.71e-12!216;UBERON:0002204!1.49e-11!167;UBERON:0000178!4.50e-09!15;UBERON:0000179!4.50e-09!15;UBERON:0000463!4.50e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.37e-12;15!UBERON:0000179;2.37e-12;15!UBERON:0000463;2.37e-12;15!UBERON:0002390;5.36e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.04e-63,98;UBERON:0003061,7.04e-63,98;UBERON:0002193,3.01e-57,108;UBERON:0002371,5.53e-48,76;UBERON:0002405,2.99e-45,93;UBERON:0001474,1.28e-42,82;UBERON:0004765,1.29e-36,90;UBERON:0001434,1.60e-30,100;UBERON:0003081,1.06e-24,203;UBERON:0002384,1.85e-18,371;UBERON:0002204,3.76e-14,167;UBERON:0000926,4.30e-14,315;UBERON:0004120,4.30e-14,315;UBERON:0006603,4.30e-14,315;UBERON:0000178,2.40e-12,15;UBERON:0000179,2.40e-12,15;UBERON:0000463,2.40e-12,15;UBERON:0000479,3.80e-07,773 | |||
|phase1_expression=0.181678379270557,0,0.704772020479856,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,2.01697543935533,0.602694528023977,1.46062018077475,0.487932798790507,0,0,0,0,0,0,38.1302894682277,45.8942295025197,31.9565772133538,36.1895134700992,28.4033754591937,29.1054311834223,0,0,0,0.0774672005803016,29.2868618924088,1.46800219667424,124.094971511141,160.034469081173,127.168370239489,8.50878802111712,12.9557466407592,6.18181362322048,6.54292074508041,7.55751887377619,6.30718559088322,21.1510423584173,23.0254017292222,30.6609307186153,12.9461576544968,9.73410684810582,17.0267205519781,79.9809979308955,49.0568359523708,83.9644216884919,10.7298133539285,10.0975275521403,25.3937537422946,52.0342617030534,66.1113795776753,65.2123868315022,5.60747210317417,5.78444607102732,7.6720455095885,158.164035052578,112.909659713537,145.117584015969,4.01997864410789,8.86520961314342,10.8594422352558,113.815106495073,199.238201069272,284.816148696796,73.3055843502438,124.160911179585,72.3322327003897,10.2219054343311,19.2226422837128,14.1438516293431,50.7322683859422,108.807422427902,71.9696765832658,0,0,0,1.28019066769952,0.400395987036012,0,0.661044872784862,0,1.1384259382189,2.93618594685469,2.29363936875137,1.32171328579026,28.0254281490768,0.526768169550154,3.34406609193516,1.96505381374582,1.43921049299656,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.506039384039006,1.27426165729639,0,0,2.25862678616659,0.76791966692651,2.49861453104692,0.947109008176067,0,2.62088766192152,2.40696176205157,0.724122019413995,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.189069634328136,0,0.43917392846563,1.57174890597255,0,0.370784442784429,45.7611825053104,45.9702506470065,26.0597602616976,5.24679373471752,4.57595928624102,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.9367961949497,209.401342640096,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0.122988438543114,0,0,0,0,0.277765335475589,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,7.87894419479671,55.4590108379993,11.5932306585208,0.93733833986777,0,0.141775097242386,0.179117045405697,0,0,1.47798971368783,0.616339038092582,7.04915592838625,9.51191692551945,6.81709140502452,0.317489471460845,0,0,0,0,0,0.285826432630578,0,0,0,1.80980402060889,0,0,6.11657668145202,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,2.41151501647669,0,0.699810938274399,23.1085183218262,16.5744840172602,18.9750545534728,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0.112085143993527,5.51686128565396,7.33133754522359,11.9359023740166,0,0,0,0.335032530668698,0,32.956309053676,17.9496875522415,37.7118117226792,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,4.25729710893606,0,0,10.7519373583901,22.0028484834989,23.9069729479715,0,0,0,0,0.153461973288062,0,0,0,0,0,0.462629081407967,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0.200506470303285,0,0,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28550171051106,0,0,0,0.650060246036521,0,1.35339005608971,0,0,0.137836572484531,0.644521469209642,0.435050081742686,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0.532306030317022,0,1.8532421910392,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.539617372749944,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,2.63783490051515,2.78841148289775,0,0,0.294747123039363,3.21003946333125,0,0,0,0,0,0,0.670302275535787,0,7.249072659812,0,0,0,0,8.62660935694688,9.1756464857085,4.5571774973933,4.04994018278241,8.22724546172388,3.8908398671563,4.86028293514303,2.37937552888281,0,0,0,2.04383492638291,0,0.142283686696828,0,0.199579371432817,0,1.48171507906718,22.0742919386698,0,1.36940807419915,6.58055562246698,2.50634477090067,0,1.2847046008296,1.41259795033733,2.12923118845163,7.55711758462682,154.849345211463,171.783250861375,173.689956522097,28.7220500240999,0,0,0,0,0,0,3.80921266106924,0,0.891547074219827,0,0.23874448473769,0.593929361665277,0,0.994147647766298,0,0,0,0,0.996239941255349,5.8019622261541,0,0,11.5699717133405,0,0,0,16.8818882174868,0.690503839458535,2.3948309234694,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,3.05163472634166,4.42317039724898,5.31985714116385,0.219385397153973,0,0.139423744278603,0.846452843541768,0.113942055847001,0.922255617552241,2.69272933229316,0.108647371922008,14.9930545074002,28.0288635809699,4.79731298416771,1.02193298195737,0.31396051279005,0,0,0.19606253431774,0,0,0,0,0,0.282706142867882,0.865554558968364,0,1.68069372556344,0.611030144933625,120.6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| ||
|short_description=p3@LCP1 | |short_description=p3@LCP1 | ||
}} | }} |
Latest revision as of 13:39, 17 September 2015
Short description: | p3@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LCP1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 0bp_to_ENST00000416500, uc001vaz.3_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | Q5TBN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.04e-63 | 98 |
blood island | 7.04e-63 | 98 |
hemolymphoid system | 3.01e-57 | 108 |
bone marrow | 5.53e-48 | 76 |
immune system | 2.99e-45 | 93 |
bone element | 1.28e-42 | 82 |
skeletal element | 1.29e-36 | 90 |
skeletal system | 1.60e-30 | 100 |
lateral plate mesoderm | 1.06e-24 | 203 |
connective tissue | 1.85e-18 | 371 |
musculoskeletal system | 3.76e-14 | 167 |
mesoderm | 4.30e-14 | 315 |
mesoderm-derived structure | 4.30e-14 | 315 |
presumptive mesoderm | 4.30e-14 | 315 |
blood | 2.40e-12 | 15 |
haemolymphatic fluid | 2.40e-12 | 15 |
organism substance | 2.40e-12 | 15 |
tissue | 3.80e-07 | 773 |