FFCP PHASE1:Hg19::chr17:57918463..57918513,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=406991 | |EntrezGene=406991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31586 | |HGNC=31586 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-113bp_to_NR_029493_5end | |association_with_transcript=-113bp_to_NR_029493_5end | ||
|cluster_id=chr17:57918463..57918513,+ | |||
|description=CAGE_peak_1_at_MIR21_5end | |description=CAGE_peak_1_at_MIR21_5end | ||
|id=chr17:57918463..57918513,+ | |id=chr17:57918463..57918513,+ | ||
|ontology_enrichment_celltype=CL:0000860;3.49e-15;33!CL:0002057;3.49e-15;33!CL:0000473;2.07e-14;39!CL:0000234;2.07e-14;39!CL:0000576;1.74e-07;48 | |ontology_enrichment_celltype=CL:0002194!1.39e-11!63;CL:0000576!1.39e-11!63;CL:0000040!1.39e-11!63;CL:0000559!1.39e-11!63;CL:0002009!3.36e-11!65;CL:0000557!4.79e-11!71;CL:0002057!1.29e-10!42;CL:0000839!3.72e-10!70;CL:0000860!2.54e-09!45;CL:0000766!2.81e-09!76 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.49e-15;33!CL:0002057;3.49e-15;33!CL:0000473;2.07e-14;39!CL:0000234;2.07e-14;39!CL:0000576;1.74e-07;48 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000473,6.99e-16,48;CL:0000234,6.99e-16,48;CL:0002194,1.12e-14,59;CL:0000576,1.12e-14,59;CL:0000040,1.12e-14,59;CL:0000559,1.12e-14,59;CL:0000860,1.15e-13,42;CL:0002057,1.15e-13,42;CL:0002009,1.37e-13,61;CL:0000557,1.38e-13,67;CL:0000839,1.56e-13,66;CL:0000766,3.81e-12,72 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;1.59e-10;42 | ||
|ontology_enrichment_disease=DOID:0050687!1.74e-08!143;DOID:14566!1.51e-07!239;DOID:162!2.69e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.57e-10!80;UBERON:0001474!2.65e-10!86;UBERON:0004765!5.61e-09!101;UBERON:0001434!5.61e-09!101;UBERON:0002204!5.50e-08!167;UBERON:0002405!1.64e-07!115;UBERON:0002390!1.79e-07!102;UBERON:0003061!1.79e-07!102;UBERON:0000926!4.65e-07!448;UBERON:0004120!4.65e-07!448;UBERON:0006603!4.65e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.98e-12,76;UBERON:0001474,1.31e-11,82;UBERON:0004765,5.65e-10,90;UBERON:0002405,9.89e-09,93;UBERON:0002390,2.39e-08,98;UBERON:0003061,2.39e-08,98;UBERON:0001434,4.19e-08,100;UBERON:0002193,3.49e-07,108 | |||
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| ||
|short_description=p1@MIR21 | |short_description=p1@MIR21 | ||
}} | }} |
Latest revision as of 13:46, 16 September 2015
Short description: | p1@MIR21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR21_5end |
Coexpression cluster: | NA |
Association with transcript: | -113bp_to_NR_029493_5end |
EntrezGene: | MIR21 |
HGNC: | 31586 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.99e-16 | 48 |
phagocyte | 6.99e-16 | 48 |
monopoietic cell | 1.12e-14 | 59 |
monocyte | 1.12e-14 | 59 |
monoblast | 1.12e-14 | 59 |
promonocyte | 1.12e-14 | 59 |
classical monocyte | 1.15e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-13 | 42 |
macrophage dendritic cell progenitor | 1.37e-13 | 61 |
granulocyte monocyte progenitor cell | 1.38e-13 | 67 |
myeloid lineage restricted progenitor cell | 1.56e-13 | 66 |
myeloid leukocyte | 3.81e-12 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.98e-12 | 76 |
bone element | 1.31e-11 | 82 |
skeletal element | 5.65e-10 | 90 |
immune system | 9.89e-09 | 93 |
hematopoietic system | 2.39e-08 | 98 |
blood island | 2.39e-08 | 98 |
skeletal system | 4.19e-08 | 100 |
hemolymphoid system | 3.49e-07 | 108 |