FFCP PHASE1:Hg19::chr1:170632325..170632339,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:170632325..170632339,+
|short_description=p24@PRRX1
|description=CAGE_peak_24_at_PRRX1_5end
|association_with_transcript=50bp_to_ENST00000367760_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=50bp_to_ENST00000367760_5end | |||
|cluster_id=chr1:170632325..170632339,+ | |||
|coexpression_cluster_id=C929 | |||
|description=CAGE_peak_24_at_PRRX1_5end | |||
|id=chr1:170632325..170632339,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.00e-22!75;CL:0000055!2.77e-18!180;CL:0002620!7.95e-13!23;CL:0002556!2.42e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002556;1.23e-12;6!CL:0002552;6.43e-11;5!CL:0002334;1.84e-08;12!CL:0000197;6.75e-08;6!CL:0000098;6.75e-08;6!CL:0002167;6.75e-08;6!CL:0000057;2.65e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.11e-17,76;CL:0002556,3.96e-13,6;CL:0002552,7.40e-11,5;CL:0002334,2.24e-08,12;CL:0000197,5.67e-08,6;CL:0000098,5.67e-08,6;CL:0002167,5.67e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.09e-13!95;UBERON:0002199!8.82e-11!45;UBERON:0002416!8.82e-11!45;UBERON:0000475!6.59e-10!365;UBERON:0002097!1.11e-09!40;UBERON:0007023!8.61e-08!115;UBERON:0000914!1.28e-07!83;UBERON:0002329!1.28e-07!83;UBERON:0003077!1.28e-07!83;UBERON:0003059!1.28e-07!83;UBERON:0007282!1.28e-07!83;UBERON:0009618!1.28e-07!83;UBERON:0007285!1.28e-07!83;UBERON:0001758!2.42e-07!6;UBERON:0003672!2.42e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.23e-12;6!UBERON:0003672;1.23e-12;6!UBERON:0000165;4.16e-11;28!UBERON:0003129;8.88e-11;7!UBERON:0011137;1.22e-09;11!UBERON:0010323;1.22e-09;11!UBERON:0001828;8.66e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,3.63e-13,29;UBERON:0000930,3.63e-13,29;UBERON:0001758,3.96e-13,6;UBERON:0003672,3.96e-13,6;UBERON:0003102,1.04e-12,99;UBERON:0003129,3.40e-11,7;UBERON:0010323,5.95e-10,11;UBERON:0001444,7.82e-08,49;UBERON:0011137,1.20e-07,14;UBERON:0001828,9.42e-07,8 | |||
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| ||
|short_description=p24@PRRX1 | |||
}} | }} |
Latest revision as of 14:10, 18 September 2015
Short description: | p24@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_PRRX1_5end |
Coexpression cluster: | C929_myxofibrosarcoma_Fibroblast_normal_Olfactory_mesenchymal_dura_Preadipocyte |
Association with transcript: | 50bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.11e-17 | 76 |
fibroblast of periodontium | 3.96e-13 | 6 |
fibroblast of gingiva | 7.40e-11 | 5 |
preadipocyte | 2.24e-08 | 12 |
receptor cell | 5.67e-08 | 6 |
sensory epithelial cell | 5.67e-08 | 6 |
olfactory epithelial cell | 5.67e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mouth | 3.63e-13 | 29 |
stomodeum | 3.63e-13 | 29 |
periodontium | 3.96e-13 | 6 |
dentition | 3.96e-13 | 6 |
surface structure | 1.04e-12 | 99 |
skull | 3.40e-11 | 7 |
cranial skeletal system | 5.95e-10 | 11 |
subdivision of head | 7.82e-08 | 49 |
axial skeletal system | 1.20e-07 | 14 |
gingiva | 9.42e-07 | 8 |