FFCP PHASE1:Hg19::chr16:68679565..68679584,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:68679565..68679584,+ | |||
|description=CAGE_peak_at_chr16:68679565..68679584,+ | |description=CAGE_peak_at_chr16:68679565..68679584,+ | ||
|id=chr16:68679565..68679584,+ | |id=chr16:68679565..68679584,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.58e-40!254;CL:0002076!1.16e-19!43;CL:0002077!6.36e-18!33;CL:0000075!6.64e-14!27;CL:0000150!6.75e-14!9;CL:0000223!7.25e-14!59;CL:0002251!1.81e-13!21;CL:0000148!4.81e-13!10;CL:0000541!4.81e-13!10;CL:0000622!3.64e-11!5;CL:0002159!4.52e-11!13;CL:0000076!5.72e-11!62;CL:0000154!3.38e-09!6;CL:0000710!8.14e-09!20;CL:0000147!8.45e-09!14;CL:0000220!4.81e-08!246;CL:0002321!7.02e-08!248;CL:0002567!9.78e-08!3;CL:0002623!3.61e-07!3;CL:0002621!4.24e-07!3;CL:1000507!5.84e-07!12;CL:1000494!5.84e-07!12;CL:0000325!9.40e-07!39;CL:0000239!9.75e-07!3;CL:1000615!9.75e-07!3;CL:0002306!9.75e-07!3 | |ontology_enrichment_celltype=CL:0000066!8.58e-40!254;CL:0002076!1.16e-19!43;CL:0002077!6.36e-18!33;CL:0000075!6.64e-14!27;CL:0000150!6.75e-14!9;CL:0000223!7.25e-14!59;CL:0002251!1.81e-13!21;CL:0000148!4.81e-13!10;CL:0000541!4.81e-13!10;CL:0000622!3.64e-11!5;CL:0002159!4.52e-11!13;CL:0000076!5.72e-11!62;CL:0000154!3.38e-09!6;CL:0000710!8.14e-09!20;CL:0000147!8.45e-09!14;CL:0000220!4.81e-08!246;CL:0002321!7.02e-08!248;CL:0002567!9.78e-08!3;CL:0002623!3.61e-07!3;CL:0002621!4.24e-07!3;CL:1000507!5.84e-07!12;CL:1000494!5.84e-07!12;CL:0000325!9.40e-07!39;CL:0000239!9.75e-07!3;CL:1000615!9.75e-07!3;CL:0002306!9.75e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.44e-29;10!CL:0002567;2.36e-25;3!CL:0000147;7.66e-21;14!CL:0002077;1.69e-19;34!CL:0000317;3.81e-17;2!CL:1000448;3.81e-17;2!CL:0002308;3.81e-17;2!CL:0002140;3.81e-17;2!CL:0000575;8.91e-17;2!CL:0000622;3.01e-15;5!CL:0000150;8.57e-15;9!CL:0000710;1.88e-14;20!CL:0000075;3.74e-14;27!CL:0002251;5.72e-14;20!CL:0000154;8.44e-13;6!CL:0002621;1.68e-11;3!CL:0002076;2.50e-10;42!CL:0002566;9.82e-10;1!CL:0002159;2.45e-09;14!CL:0002252;3.00e-09;1 | |ontology_enrichment_celltype_v019=CL:0000148;2.44e-29;10!CL:0002567;2.36e-25;3!CL:0000147;7.66e-21;14!CL:0002077;1.69e-19;34!CL:0000317;3.81e-17;2!CL:1000448;3.81e-17;2!CL:0002308;3.81e-17;2!CL:0002140;3.81e-17;2!CL:0000575;8.91e-17;2!CL:0000622;3.01e-15;5!CL:0000150;8.57e-15;9!CL:0000710;1.88e-14;20!CL:0000075;3.74e-14;27!CL:0002251;5.72e-14;20!CL:0000154;8.44e-13;6!CL:0002621;1.68e-11;3!CL:0002076;2.50e-10;42!CL:0002566;9.82e-10;1!CL:0002159;2.45e-09;14!CL:0002252;3.00e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.62e-29,10;CL:0000541,1.62e-29,10;CL:0002567,1.33e-25,3;CL:0002077,1.67e-22,34;CL:0000147,5.74e-21,14;CL:0000317,1.91e-17,2;CL:1000448,1.91e-17,2;CL:0002308,1.91e-17,2;CL:0002140,1.91e-17,2;CL:0000575,9.68e-17,2;CL:0000622,2.05e-15,5;CL:0000150,6.58e-15,9;CL:0000710,1.54e-14,20;CL:0000075,3.35e-14,27;CL:0002251,6.90e-14,20;CL:0000154,6.13e-13,6;CL:0000066,9.69e-12,253;CL:0002621,1.97e-11,3;CL:0002076,4.98e-11,42;CL:0002566,9.44e-10,1;CL:0000223,9.62e-10,58;CL:0000221,1.80e-09,72;CL:0002252,1.99e-09,1;CL:0002159,2.08e-09,14;CL:0002321,3.52e-08,250 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!3.80e-14!14;DOID:305!1.58e-12!106;DOID:0050687!1.01e-09!143 | |ontology_enrichment_disease=DOID:1749!3.80e-14!14;DOID:305!1.58e-12!106;DOID:0050687!1.01e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.00e-09;1!DOID:3149;3.00e-09;1 | |ontology_enrichment_disease_v019=DOID:3151;3.00e-09;1!DOID:3149;3.00e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,3.00e-09,1;DOID:3149,3.00e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000161!3.90e-13!35;UBERON:0001004!5.22e-12!72;UBERON:0000166!4.41e-11!21;UBERON:0003729!1.32e-09!5;UBERON:0003102!3.82e-09!95;UBERON:0000165!7.04e-09!28;UBERON:0000930!7.04e-09!28;UBERON:0003064!9.10e-09!37;UBERON:0001444!9.70e-09!48;UBERON:0000344!2.12e-08!12;UBERON:0003343!2.66e-08!4;UBERON:0004785!2.66e-08!4;UBERON:0004119!3.81e-08!169;UBERON:0000925!3.81e-08!169;UBERON:0006595!3.81e-08!169;UBERON:0001737!1.62e-07!9;UBERON:0001949!4.24e-07!3;UBERON:0009773!5.84e-07!12;UBERON:0001231!5.84e-07!12;UBERON:0004810!5.84e-07!12;UBERON:0006554!8.57e-07!44;UBERON:0000065!8.63e-07!53;UBERON:0006853!9.75e-07!3;UBERON:0007685!9.75e-07!3;UBERON:0004134!9.75e-07!3 | |ontology_enrichment_uberon=UBERON:0000161!3.90e-13!35;UBERON:0001004!5.22e-12!72;UBERON:0000166!4.41e-11!21;UBERON:0003729!1.32e-09!5;UBERON:0003102!3.82e-09!95;UBERON:0000165!7.04e-09!28;UBERON:0000930!7.04e-09!28;UBERON:0003064!9.10e-09!37;UBERON:0001444!9.70e-09!48;UBERON:0000344!2.12e-08!12;UBERON:0003343!2.66e-08!4;UBERON:0004785!2.66e-08!4;UBERON:0004119!3.81e-08!169;UBERON:0000925!3.81e-08!169;UBERON:0006595!3.81e-08!169;UBERON:0001737!1.62e-07!9;UBERON:0001949!4.24e-07!3;UBERON:0009773!5.84e-07!12;UBERON:0001231!5.84e-07!12;UBERON:0004810!5.84e-07!12;UBERON:0006554!8.57e-07!44;UBERON:0000065!8.63e-07!53;UBERON:0006853!9.75e-07!3;UBERON:0007685!9.75e-07!3;UBERON:0004134!9.75e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;3.81e-17;2!UBERON:0007771;3.81e-17;2!UBERON:0003297;3.81e-17;2!UBERON:0001821;3.81e-17;2!UBERON:0003487;3.81e-17;2!UBERON:0001820;3.81e-17;2!UBERON:0001949;1.68e-11;3!UBERON:0000161;1.90e-10;19!UBERON:0000166;1.90e-10;19!UBERON:0003729;4.81e-10;13!UBERON:0003343;4.98e-09;4!UBERON:0004785;4.98e-09;4!UBERON:0000964;7.57e-09;4!UBERON:0010409;7.57e-09;4!UBERON:0000165;5.01e-07;28!UBERON:0001444;9.36e-07;48 | |ontology_enrichment_uberon_v019=UBERON:0002419;3.81e-17;2!UBERON:0007771;3.81e-17;2!UBERON:0003297;3.81e-17;2!UBERON:0001821;3.81e-17;2!UBERON:0003487;3.81e-17;2!UBERON:0001820;3.81e-17;2!UBERON:0001949;1.68e-11;3!UBERON:0000161;1.90e-10;19!UBERON:0000166;1.90e-10;19!UBERON:0003729;4.81e-10;13!UBERON:0003343;4.98e-09;4!UBERON:0004785;4.98e-09;4!UBERON:0000964;7.57e-09;4!UBERON:0010409;7.57e-09;4!UBERON:0000165;5.01e-07;28!UBERON:0001444;9.36e-07;48 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.91e-17,2;UBERON:0007771,1.91e-17,2;UBERON:0003297,1.91e-17,2;UBERON:0001821,1.91e-17,2;UBERON:0003487,1.91e-17,2;UBERON:0001820,1.91e-17,2;UBERON:0005089,1.91e-17,2;UBERON:0005088,1.91e-17,2;UBERON:0001949,1.97e-11,3;UBERON:0003729,6.48e-10,13;UBERON:0003102,1.86e-09,99;UBERON:0001444,2.84e-09,49;UBERON:0000166,6.70e-09,22;UBERON:0003343,7.29e-09,4;UBERON:0004785,7.29e-09,4;UBERON:0000964,7.89e-09,4;UBERON:0010409,7.89e-09,4;UBERON:0004348,7.89e-09,4;UBERON:0005427,7.89e-09,4;UBERON:0000033,5.54e-08,56;UBERON:0000161,1.82e-07,36;UBERON:0000153,4.14e-07,62;UBERON:0007811,4.14e-07,62 | |||
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| ||
|short_description=p@chr16:68679565..68679584,+ | |short_description=p@chr16:68679565..68679584,+ | ||
}} | }} |
Latest revision as of 11:46, 25 July 2015
Short description: | p@chr16:68679565..68679584, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:68679565..68679584, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.62e-29 | 10 |
melanoblast | 1.62e-29 | 10 |
light melanocyte | 1.33e-25 | 3 |
ecto-epithelial cell | 1.67e-22 | 34 |
pigment cell | 5.74e-21 | 14 |
sebum secreting cell | 1.91e-17 | 2 |
epithelial cell of sweat gland | 1.91e-17 | 2 |
epithelial cell of skin gland | 1.91e-17 | 2 |
acinar cell of sebaceous gland | 1.91e-17 | 2 |
corneal epithelial cell | 9.68e-17 | 2 |
acinar cell | 2.05e-15 | 5 |
glandular epithelial cell | 6.58e-15 | 9 |
neurecto-epithelial cell | 1.54e-14 | 20 |
columnar/cuboidal epithelial cell | 3.35e-14 | 27 |
epithelial cell of alimentary canal | 6.90e-14 | 20 |
protein secreting cell | 6.13e-13 | 6 |
epithelial cell | 9.69e-12 | 253 |
gingival epithelial cell | 1.97e-11 | 3 |
endo-epithelial cell | 4.98e-11 | 42 |
dark melanocyte | 9.44e-10 | 1 |
endodermal cell | 9.62e-10 | 58 |
ectodermal cell | 1.80e-09 | 72 |
epithelial cell of esophagus | 1.99e-09 | 1 |
general ecto-epithelial cell | 2.08e-09 | 14 |
embryonic cell | 3.52e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.91e-17 | 2 |
epidermis gland | 1.91e-17 | 2 |
gland of integumental system | 1.91e-17 | 2 |
sebaceous gland | 1.91e-17 | 2 |
skin sebaceous gland | 1.91e-17 | 2 |
sweat gland | 1.91e-17 | 2 |
sweat gland placode | 1.91e-17 | 2 |
sebaceous gland placode | 1.91e-17 | 2 |
gingival epithelium | 1.97e-11 | 3 |
mouth mucosa | 6.48e-10 | 13 |
surface structure | 1.86e-09 | 99 |
subdivision of head | 2.84e-09 | 49 |
oral opening | 6.70e-09 | 22 |
mucosa of oral region | 7.29e-09 | 4 |
respiratory system mucosa | 7.29e-09 | 4 |
cornea | 7.89e-09 | 4 |
eye surface | 7.89e-09 | 4 |
optic eminence | 7.89e-09 | 4 |
corneal primordium | 7.89e-09 | 4 |
head | 5.54e-08 | 56 |
orifice | 1.82e-07 | 36 |
anterior region of body | 4.14e-07 | 62 |
craniocervical region | 4.14e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.00e-09 | 1 |
keratoacanthoma | 3.00e-09 | 1 |