FFCP PHASE1:Hg19::chr12:93399816..93399825,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:93399816..93399825,+ | |||
|coexpression_cluster_id=C228 | |coexpression_cluster_id=C228 | ||
|description=CAGE_peak_at_chr12:93399816..93399825,+ | |description=CAGE_peak_at_chr12:93399816..93399825,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!1.26e-24!12;CL:0000417!1.26e-24!12;CL:0000668!1.26e-24!12;CL:0000414!1.26e-24!12;CL:0000412!1.26e-24!12;CL:0000182!1.26e-24!12;CL:0002563!3.57e-19!4;CL:0002322!3.61e-15!5;CL:0000223!8.30e-15!59;CL:0002253!1.43e-10!2;CL:0000148!4.66e-08!10;CL:0000541!4.66e-08!10;CL:0002231!2.47e-07!3 | |ontology_enrichment_celltype=CL:0000181!1.26e-24!12;CL:0000417!1.26e-24!12;CL:0000668!1.26e-24!12;CL:0000414!1.26e-24!12;CL:0000412!1.26e-24!12;CL:0000182!1.26e-24!12;CL:0002563!3.57e-19!4;CL:0002322!3.61e-15!5;CL:0000223!8.30e-15!59;CL:0002253!1.43e-10!2;CL:0000148!4.66e-08!10;CL:0000541!4.66e-08!10;CL:0002231!2.47e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.55e-44;12!CL:0002253;5.48e-18;2!CL:0002231;2.89e-12;3!CL:0002563;1.12e-09;4 | |ontology_enrichment_celltype_v019=CL:0000182;3.55e-44;12!CL:0002253;5.48e-18;2!CL:0002231;2.89e-12;3!CL:0002563;1.12e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.17e-44,12;CL:0000223,7.29e-21,58;CL:0002253,5.48e-18,2;CL:0002231,3.24e-12,3;CL:0002563,1.12e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.13e-48;11!UBERON:0009497;7.59e-41;13!UBERON:0003104;6.50e-27;31!UBERON:0001041;3.91e-18;30!CL:0000223;2.14e-12;58 | |ontology_enrichment_development_v019=UBERON:0004161;4.13e-48;11!UBERON:0009497;7.59e-41;13!UBERON:0003104;6.50e-27;31!UBERON:0001041;3.91e-18;30!CL:0000223;2.14e-12;58 | ||
|ontology_enrichment_disease=DOID:0050619!3.25e-19!1;DOID:1357!3.25e-19!1;DOID:7!8.06e-08!39 | |ontology_enrichment_disease=DOID:0050619!3.25e-19!1;DOID:1357!3.25e-19!1;DOID:7!8.06e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:7;4.10e-13;39 | |ontology_enrichment_disease_v019=DOID:7;4.10e-13;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,4.09e-14,39;DOID:305,3.00e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001764!3.25e-19!1;UBERON:0001825!3.25e-19!1;UBERON:0001242!3.57e-19!4;UBERON:0001262!3.57e-19!4;UBERON:0004786!3.57e-19!4;UBERON:0004808!3.57e-19!4;UBERON:0001277!3.57e-19!4;UBERON:0003929!3.33e-16!54;UBERON:0002107!1.02e-15!19;UBERON:0006925!1.02e-15!19;UBERON:0008836!1.02e-15!19;UBERON:0003350!1.51e-15!5;UBERON:0008835!1.26e-13!22;UBERON:0003894!1.26e-13!22;UBERON:0009854!4.76e-13!23;UBERON:0007499!4.94e-12!25;UBERON:0009497!4.94e-12!25;UBERON:0000015!4.94e-12!25;UBERON:0002423!4.94e-12!25;UBERON:0006235!4.94e-12!25;UBERON:0004161!4.94e-12!25;UBERON:0005057!1.39e-11!26;UBERON:0009856!1.39e-11!26;UBERON:0005911!1.45e-10!82;UBERON:0002365!9.12e-10!31;UBERON:0002330!9.12e-10!31;UBERON:0000485!4.61e-09!9;UBERON:0002368!1.10e-08!35;UBERON:0002530!8.60e-08!59;UBERON:0000344!5.15e-07!12;UBERON:0000060!5.15e-07!12;UBERON:0000949!8.25e-07!45 | |ontology_enrichment_uberon=UBERON:0001764!3.25e-19!1;UBERON:0001825!3.25e-19!1;UBERON:0001242!3.57e-19!4;UBERON:0001262!3.57e-19!4;UBERON:0004786!3.57e-19!4;UBERON:0004808!3.57e-19!4;UBERON:0001277!3.57e-19!4;UBERON:0003929!3.33e-16!54;UBERON:0002107!1.02e-15!19;UBERON:0006925!1.02e-15!19;UBERON:0008836!1.02e-15!19;UBERON:0003350!1.51e-15!5;UBERON:0008835!1.26e-13!22;UBERON:0003894!1.26e-13!22;UBERON:0009854!4.76e-13!23;UBERON:0007499!4.94e-12!25;UBERON:0009497!4.94e-12!25;UBERON:0000015!4.94e-12!25;UBERON:0002423!4.94e-12!25;UBERON:0006235!4.94e-12!25;UBERON:0004161!4.94e-12!25;UBERON:0005057!1.39e-11!26;UBERON:0009856!1.39e-11!26;UBERON:0005911!1.45e-10!82;UBERON:0002365!9.12e-10!31;UBERON:0002330!9.12e-10!31;UBERON:0000485!4.61e-09!9;UBERON:0002368!1.10e-08!35;UBERON:0002530!8.60e-08!59;UBERON:0000344!5.15e-07!12;UBERON:0000060!5.15e-07!12;UBERON:0000949!8.25e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.30e-28;19!UBERON:0006925;3.30e-28;19!UBERON:0002423;1.28e-21;25!UBERON:0002365;1.21e-16;31!UBERON:0002330;1.21e-16;31!UBERON:0002368;3.86e-15;33!UBERON:0000949;1.61e-11;43!UBERON:0002530;1.06e-09;57!UBERON:0001052;1.12e-09;4!UBERON:0001242;1.12e-09;4!UBERON:0001262;1.12e-09;4!UBERON:0004786;1.12e-09;4!UBERON:0004808;1.12e-09;4!UBERON:0001277;1.12e-09;4!UBERON:0004907;5.35e-08;5!UBERON:0002417;1.13e-07;58!UBERON:0000916;1.13e-07;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;3.30e-28;19!UBERON:0006925;3.30e-28;19!UBERON:0002423;1.28e-21;25!UBERON:0002365;1.21e-16;31!UBERON:0002330;1.21e-16;31!UBERON:0002368;3.86e-15;33!UBERON:0000949;1.61e-11;43!UBERON:0002530;1.06e-09;57!UBERON:0001052;1.12e-09;4!UBERON:0001242;1.12e-09;4!UBERON:0001262;1.12e-09;4!UBERON:0004786;1.12e-09;4!UBERON:0004808;1.12e-09;4!UBERON:0001277;1.12e-09;4!UBERON:0004907;5.35e-08;5!UBERON:0002417;1.13e-07;58!UBERON:0000916;1.13e-07;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.07e-28,19;UBERON:0006925,3.07e-28,19;UBERON:0008836,3.07e-28,19;UBERON:0008835,1.71e-24,22;UBERON:0003894,1.71e-24,22;UBERON:0009854,1.84e-23,23;UBERON:0003929,2.29e-22,54;UBERON:0007499,1.21e-21,25;UBERON:0009497,1.21e-21,25;UBERON:0000015,1.21e-21,25;UBERON:0002423,1.21e-21,25;UBERON:0006235,1.21e-21,25;UBERON:0004161,1.21e-21,25;UBERON:0009856,7.73e-21,26;UBERON:0002365,1.37e-17,31;UBERON:0002330,1.37e-17,31;UBERON:0002368,1.18e-15,35;UBERON:0005911,6.57e-15,82;UBERON:0002530,2.06e-14,59;UBERON:0000949,2.58e-12,45;UBERON:0004921,2.09e-10,118;UBERON:0005172,2.34e-10,54;UBERON:0005173,2.34e-10,54;UBERON:0001052,1.12e-09,4;UBERON:0001242,1.12e-09,4;UBERON:0001262,1.12e-09,4;UBERON:0004786,1.12e-09,4;UBERON:0004808,1.12e-09,4;UBERON:0001277,1.12e-09,4;UBERON:0002417,2.25e-09,60;UBERON:0000916,2.25e-09,60;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0000490,1.95e-08,148;UBERON:0004907,5.35e-08,5;UBERON:0001046,5.94e-08,19;UBERON:0003104,7.94e-08,160;UBERON:0009142,7.94e-08,160;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160;UBERON:0005256,3.50e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66465135732005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,2.12714592229504,1.7307330260045,1.88729922791718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66465135732005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,2.12714592229504,1.7307330260045,1.88729922791718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:93399816..93399825,+ | |short_description=p@chr12:93399816..93399825,+ | ||
}} | }} |
Latest revision as of 13:39, 24 July 2015
Short description: | p@chr12:93399816..93399825, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:93399816..93399825, + |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.17e-44 | 12 |
endodermal cell | 7.29e-21 | 58 |
epithelial cell of large intestine | 5.48e-18 | 2 |
epithelial cell of prostate | 3.24e-12 | 3 |
intestinal epithelial cell | 1.12e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.09e-14 | 39 |
carcinoma | 3.00e-08 | 106 |