FFCP PHASE1:Hg19::chr10:99159502..99159507,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:99159502..99159507,- | |||
|description=CAGE_peak_at_chr10:99159502..99159507,- | |description=CAGE_peak_at_chr10:99159502..99159507,- | ||
|id=chr10:99159502..99159507,- | |id=chr10:99159502..99159507,- | ||
|ontology_enrichment_celltype=CL:0002087!8.07e-14!119;CL:0000738!3.17e-12!140;CL:0002031!1.41e-11!124;CL:0000037!3.70e-11!172;CL:0000566!3.70e-11!172;CL:0002032!9.47e-10!165;CL:0000837!9.47e-10!165;CL:0000988!1.07e-09!182;CL:0002393!3.10e-09!9;CL:0002397!3.10e-09!9;CL:0000838!6.75e-09!52;CL:0000542!1.57e-08!53;CL:0000051!1.57e-08!53;CL:0000860!4.08e-07!45 | |ontology_enrichment_celltype=CL:0002087!8.07e-14!119;CL:0000738!3.17e-12!140;CL:0002031!1.41e-11!124;CL:0000037!3.70e-11!172;CL:0000566!3.70e-11!172;CL:0002032!9.47e-10!165;CL:0000837!9.47e-10!165;CL:0000988!1.07e-09!182;CL:0002393!3.10e-09!9;CL:0002397!3.10e-09!9;CL:0000838!6.75e-09!52;CL:0000542!1.57e-08!53;CL:0000051!1.57e-08!53;CL:0000860!4.08e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0002393;6.03e-19;6!CL:0002397;6.03e-19;6!CL:0000623;5.39e-15;3!CL:0000875;8.48e-14;3!CL:0002396;8.48e-14;3!CL:0000624;7.69e-13;6!CL:0000791;4.20e-12;18!CL:0000789;4.20e-12;18!CL:0002419;4.20e-12;18!CL:0000084;7.68e-11;25!CL:0002087;2.69e-09;104!CL:0000576;2.17e-08;48!CL:0000542;8.18e-08;53 | |ontology_enrichment_celltype_v019=CL:0002393;6.03e-19;6!CL:0002397;6.03e-19;6!CL:0000623;5.39e-15;3!CL:0000875;8.48e-14;3!CL:0002396;8.48e-14;3!CL:0000624;7.69e-13;6!CL:0000791;4.20e-12;18!CL:0000789;4.20e-12;18!CL:0002419;4.20e-12;18!CL:0000084;7.68e-11;25!CL:0002087;2.69e-09;104!CL:0000576;2.17e-08;48!CL:0000542;8.18e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.09e-30,9;CL:0002397,2.09e-30,9;CL:0002087,2.38e-24,115;CL:0000738,4.59e-23,136;CL:0002031,5.31e-23,120;CL:0000037,2.13e-17,168;CL:0002032,6.78e-17,161;CL:0000837,6.78e-17,161;CL:0000988,3.58e-16,177;CL:0000623,4.96e-15,3;CL:0000825,4.96e-15,3;CL:0000838,1.52e-14,52;CL:0000542,3.28e-14,53;CL:0000051,3.28e-14,53;CL:0000875,8.35e-14,3;CL:0002396,8.35e-14,3;CL:0000624,1.05e-12,6;CL:0000860,1.41e-12,42;CL:0002057,1.41e-12,42;CL:0000791,5.01e-12,18;CL:0000789,5.01e-12,18;CL:0002420,5.01e-12,18;CL:0002419,5.01e-12,18;CL:0000790,5.01e-12,18;CL:0000084,8.91e-11,25;CL:0000827,8.91e-11,25;CL:0000473,1.06e-10,48;CL:0000234,1.06e-10,48;CL:0000766,3.30e-10,72;CL:0000839,7.59e-10,66;CL:0000557,1.17e-09,67;CL:0002194,1.28e-09,59;CL:0000576,1.28e-09,59;CL:0000040,1.28e-09,59;CL:0000559,1.28e-09,59;CL:0002009,3.17e-09,61 | |||
|ontology_enrichment_development_v019=CL:0000790;4.20e-12;18!CL:0002057;1.76e-09;42!CL:0000051;8.18e-08;53 | |ontology_enrichment_development_v019=CL:0000790;4.20e-12;18!CL:0002057;1.76e-09;42!CL:0000051;8.18e-08;53 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.48e-13,98;UBERON:0003061,3.48e-13,98;UBERON:0002193,1.46e-11,108;UBERON:0002371,4.84e-11,76;UBERON:0001474,5.40e-10,82;UBERON:0004765,8.12e-09,90;UBERON:0002405,1.99e-08,93;UBERON:0001434,1.29e-07,100 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.157421562627358,0.393364276848904,0,1.08371286321253,0,0,0,0.154934401160603,0,0.293600439334847,1.10799081706375,3.81034450193269,3.03815219002193,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0,0,0.645484683583826,1.35426486594342,0.376484679085209,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,1.00499466102697,0,0,1.21079900526674,0,0,0.633765858935825,1.27562579979026,1.04829322754188,1.57260083605093,0.750884464207532,0.964353520182481,1.42506371870624,1.59133341759272,1.0959849225878,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,2.84606484554724,1.76171156811282,0.382273228125229,0,0,0.526768169550154,2.16380747125216,3.14408610199332,5.14003747498773,0.167186495390678,0,0.473447805734733,1.94826728407911,0.222820913770347,1.17842362989935,0.443067789167242,0.270803863765016,0.25618263945135,0,0,0.276350017785848,0,0.593146252648242,1.33770414044857,2.09071047609954,0.226618685395132,0,2.40539211837841,0.759059076058509,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0,3.42731463482045,3.7441627409691,3.04131248153878,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0,0,0,0.710019185033229,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,1.8735593944205,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,3.45004119775228,2.43851768931522,0,1.30139853857622,0,0,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0,0,0,0.620304078368662,6.25571182373989,0.533637789017222,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,1.70894156152249,0,0.822724546172388,1.29694662238543,0,0,0.213648142254946,0,0.245040215981032,0,0.144269212976445,0,0.478278818186467,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0.307240764308458,0,1.50164227540718,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0,0,0.16480387422676,1.26675244876796,0,0,0.251932747854276,0.102268682502155,0.246169610922139,0,0.0898683511473268,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0.709163045303809,1.03423011972439,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0.153900517007594,0,0.23056390438806,0,0.217294743844016,0,0,0,0,0.31396051279005,0,0.225595660617181,0,0,0,0.317873157960757,0.632994193584081,0,0.282706142867882,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0.19566461893209,0.971121518136371,0,0,0,0.568679216656392,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0.293977192243133,0.34823682632161,0,0.171986032471617,0.0967563312890851,0.146178634172371,0.164230914106418,0,0.0882561266915003,0,0.137041924646751,0.596143835108969,0,0,0.160317640503067,0,0,0.144090417154106,0.343609788497747,0.343189995723929,0,0.124252535565433,0.471388069233591,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,1.31443677139657,0,0,0.717873024576814,0.399358000997982,0,0,0.0671834724867263,0.360299883542404,0,0,0.164831716762333,0.13480708770837,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0.482259445395058,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0.13223260174269,0.342173675768659,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.553394539744923,0.249960815924213,0.909894705249887,0.570930667089935,0,0,0,0.298509605773748,0.701139929541673,0,0.189403005275089,1.25783950876288,1.77962244319307,0.457680136793847,0.907385542579434,0,0,0.63718706865481,0,0.310525913752519,0.829412415681711,0.53168342911599,0,0.601030435988874,0,0.813741466409323,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0.256241518587947,0,0,0.276516872303462,0,0,0.163565394255844,0,0.245772908753719,0,0.19998739585493,0.320075189082423,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.327628914576042,0,0,1.61116493536703,0,0.636008701306837,0.157723490002507,0,0,0,0,0,0.638535436228605,0,0,0,0,0,0.392590874004102,0.11796972334774,0.733714394086716,0.231051332300676,0,0,0,0,0.20170506870352,0,0.261906694481422,0.327543835020193,0.591424344868181,0,0,0.206686796501184,0,0,0,0,1.93458368795583,0.127762427639595,0,0,0,0,0,0.460935950223117,0.171488009437418,0,0.131545547125698,0.236387681767936,0.222462803784138,0,0,0,0,0,0.47775168788705,0,0.47404083519818,0.348724276104376,0,0,0,0.17071847709395,0,0,0.118332000730565,0.170426809518315,0,0,0,0.955538938977433,0.894843454382338,0.098150233615243,0.365753774946808,0,0,0,0,0,0.198950775161368,0.951360726220549,0.11294608203896,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0.352894871715692,0.641930933513346,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0,0.760191006068622,0.101988829741982,0,0.275684698604535,0.250707539292375,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0.33639558774184,0,0,0,0,0,0,0,0,0.213454691755431,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.157421562627358,0.393364276848904,0,1.08371286321253,0,0,0,0.154934401160603,0,0.293600439334847,1.10799081706375,3.81034450193269,3.03815219002193,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0,0,0.645484683583826,1.35426486594342,0.376484679085209,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,1.00499466102697,0,0,1.21079900526674,0,0,0.633765858935825,1.27562579979026,1.04829322754188,1.57260083605093,0.750884464207532,0.964353520182481,1.42506371870624,1.59133341759272,1.0959849225878,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,2.84606484554724,1.76171156811282,0.382273228125229,0,0,0.526768169550154,2.16380747125216,3.14408610199332,5.14003747498773,0.167186495390678,0,0.473447805734733,1.94826728407911,0.222820913770347,1.17842362989935,0.443067789167242,0.270803863765016,0.25618263945135,0,0,0.276350017785848,0,0.593146252648242,1.33770414044857,2.09071047609954,0.226618685395132,0,2.40539211837841,0.759059076058509,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0,3.42731463482045,3.7441627409691,3.04131248153878,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0,0,0,0.710019185033229,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,1.8735593944205,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,3.45004119775228,2.43851768931522,0,1.30139853857622,0,0,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0,0,0,0.620304078368662,6.25571182373989,0.533637789017222,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,1.70894156152249,0,0.822724546172388,1.29694662238543,0,0,0.213648142254946,0,0.245040215981032,0,0.144269212976445,0,0.478278818186467,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0.307240764308458,0,1.50164227540718,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0,0,0.16480387422676,1.26675244876796,0,0,0.251932747854276,0.102268682502155,0.246169610922139,0,0.0898683511473268,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0.709163045303809,1.03423011972439,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0.153900517007594,0,0.23056390438806,0,0.217294743844016,0,0,0,0,0.31396051279005,0,0.225595660617181,0,0,0,0.317873157960757,0.632994193584081,0,0.282706142867882,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0.19566461893209,0.971121518136371,0,0,0,0.568679216656392,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0.293977192243133,0.34823682632161,0,0.171986032471617,0.0967563312890851,0.146178634172371,0.164230914106418,0,0.0882561266915003,0,0.137041924646751,0.596143835108969,0,0,0.160317640503067,0,0,0.144090417154106,0.343609788497747,0.343189995723929,0,0.124252535565433,0.471388069233591,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,1.31443677139657,0,0,0.717873024576814,0.399358000997982,0,0,0.0671834724867263,0.360299883542404,0,0,0.164831716762333,0.13480708770837,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0.482259445395058,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0.13223260174269,0.342173675768659,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.553394539744923,0.249960815924213,0.909894705249887,0.570930667089935,0,0,0,0.298509605773748,0.701139929541673,0,0.189403005275089,1.25783950876288,1.77962244319307,0.457680136793847,0.907385542579434,0,0,0.63718706865481,0,0.310525913752519,0.829412415681711,0.53168342911599,0,0.601030435988874,0,0.813741466409323,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0.256241518587947,0,0,0.276516872303462,0,0,0.163565394255844,0,0.245772908753719,0,0.19998739585493,0.320075189082423,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.327628914576042,0,0,1.61116493536703,0,0.636008701306837,0.157723490002507,0,0,0,0,0,0.638535436228605,0,0,0,0,0,0.392590874004102,0.11796972334774,0.733714394086716,0.231051332300676,0,0,0,0,0.20170506870352,0,0.261906694481422,0.327543835020193,0.591424344868181,0,0,0.206686796501184,0,0,0,0,1.93458368795583,0.127762427639595,0,0,0,0,0,0.460935950223117,0.171488009437418,0,0.131545547125698,0.236387681767936,0.222462803784138,0,0,0,0,0,0.47775168788705,0,0.47404083519818,0.348724276104376,0,0,0,0.17071847709395,0,0,0.118332000730565,0.170426809518315,0,0,0,0.955538938977433,0.894843454382338,0.098150233615243,0.365753774946808,0,0,0,0,0,0.198950775161368,0.951360726220549,0.11294608203896,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0.352894871715692,0.641930933513346,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0,0.760191006068622,0.101988829741982,0,0.275684698604535,0.250707539292375,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0.33639558774184,0,0,0,0,0,0,0,0,0.213454691755431,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr10:99159502..99159507,- | |short_description=p@chr10:99159502..99159507,- | ||
}} | }} |
Latest revision as of 17:14, 23 July 2015
Short description: | p@chr10:99159502..99159507, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:99159502..99159507, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.48e-13 | 98 |
blood island | 3.48e-13 | 98 |
hemolymphoid system | 1.46e-11 | 108 |
bone marrow | 4.84e-11 | 76 |
bone element | 5.40e-10 | 82 |
skeletal element | 8.12e-09 | 90 |
immune system | 1.99e-08 | 93 |
skeletal system | 1.29e-07 | 100 |