FFCP PHASE1:Hg19::chr1:39570480..39570491,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:39570480..39570491,+
|short_description=p@chr1:39570480..39570491,+
|description=CAGE_peak_at_chr1:39570480..39570491,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:39570480..39570491,+ | |||
|coexpression_cluster_id=C310 | |||
|description=CAGE_peak_at_chr1:39570480..39570491,+ | |||
|id=chr1:39570480..39570491,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.71e-22;2!UBERON:0006601;9.61e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.36e-59!57;UBERON:0005068!1.36e-59!57;UBERON:0006241!1.36e-59!57;UBERON:0007135!1.36e-59!57;UBERON:0005743!1.80e-53!86;UBERON:0002020!5.50e-53!34;UBERON:0003528!5.50e-53!34;UBERON:0001017!1.42e-52!82;UBERON:0001893!2.93e-52!34;UBERON:0002791!1.15e-50!33;UBERON:0000073!1.80e-50!94;UBERON:0001016!1.80e-50!94;UBERON:0001869!3.43e-49!32;UBERON:0002616!8.52e-49!59;UBERON:0000955!1.10e-47!69;UBERON:0006238!1.10e-47!69;UBERON:0002780!2.42e-47!41;UBERON:0001890!2.42e-47!41;UBERON:0006240!2.42e-47!41;UBERON:0003080!5.77e-46!42;UBERON:0003075!1.30e-43!86;UBERON:0007284!1.30e-43!86;UBERON:0002346!5.69e-41!90;UBERON:0000956!3.49e-37!25;UBERON:0000203!3.49e-37!25;UBERON:0003056!7.99e-36!61;UBERON:0002619!4.33e-32!22;UBERON:0001950!1.68e-28!20;UBERON:0000033!7.93e-28!123;UBERON:0007023!6.04e-26!115;UBERON:0004121!6.78e-26!169;UBERON:0000153!8.16e-26!129;UBERON:0007811!8.16e-26!129;UBERON:0000924!6.86e-25!173;UBERON:0006601!6.86e-25!173;UBERON:0000025!3.63e-18!194;UBERON:0002308!4.35e-17!9;UBERON:0002420!4.35e-17!9;UBERON:0000125!4.35e-17!9;UBERON:0007245!4.35e-17!9;UBERON:0010009!4.35e-17!9;UBERON:0010011!4.35e-17!9;UBERON:0000454!4.35e-17!9;UBERON:0004111!1.75e-15!241;UBERON:0003076!3.04e-14!15;UBERON:0003057!3.04e-14!15;UBERON:0009663!2.38e-13!7;UBERON:0002298!2.92e-12!8;UBERON:0000483!3.39e-12!309;UBERON:0000119!6.66e-12!312;UBERON:0000477!1.42e-11!286;UBERON:0000475!1.45e-11!365;UBERON:0000200!1.68e-11!6;UBERON:0000349!4.00e-10!5;UBERON:0004733!9.31e-10!12;UBERON:0002028!9.31e-10!12;UBERON:0007277!9.31e-10!12;UBERON:0002021!1.45e-09!5;UBERON:0001872!2.81e-09!5;UBERON:0004732!7.22e-09!13;UBERON:0000064!1.02e-08!219;UBERON:0001871!1.18e-08!7;UBERON:0000369!2.87e-08!4;UBERON:0002435!2.87e-08!4;UBERON:0000204!2.87e-08!4;UBERON:0010082!2.87e-08!4;UBERON:0001896!3.01e-07!3;UBERON:0005290!3.01e-07!3;UBERON:0010096!3.01e-07!3;UBERON:0000988!3.53e-07!3;UBERON:0005383!3.53e-07!3;UBERON:0005382!3.53e-07!3;UBERON:0006331!7.09e-07!3;UBERON:0002771!7.66e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.28e-50;34!UBERON:0002020;2.28e-50;34!UBERON:0002298;6.55e-44;6!UBERON:0000125;1.27e-41;9!UBERON:0002308;1.27e-41;9!UBERON:0002420;1.46e-41;9!UBERON:0007245;1.46e-41;9!UBERON:0010009;1.46e-41;9!UBERON:0010011;1.46e-41;9!UBERON:0000454;1.46e-41;9!UBERON:0002791;7.08e-40;32!UBERON:0001869;1.81e-38;32!UBERON:0001893;1.01e-35;34!UBERON:0001896;2.97e-32;3!UBERON:0005290;2.97e-32;3!UBERON:0005383;4.09e-32;3!UBERON:0005382;4.09e-32;3!UBERON:0000073;3.34e-29;53!UBERON:0002616;3.34e-29;53!UBERON:0002619;4.51e-28;22!UBERON:0000956;9.66e-25;25!UBERON:0000203;9.66e-25;25!UBERON:0000369;2.85e-24;4!UBERON:0002435;2.85e-24;4!UBERON:0000204;2.85e-24;4!UBERON:0001871;3.23e-24;6!UBERON:0009663;3.23e-24;7!UBERON:0001950;1.08e-23;20!UBERON:0000955;1.60e-23;68!UBERON:0002780;1.07e-22;41!UBERON:0001890;1.07e-22;41!UBERON:0002148;3.00e-22;2!UBERON:0006331;3.00e-22;2!UBERON:0009662;3.00e-22;2!UBERON:0001876;3.71e-22;2!UBERON:0001873;3.71e-22;2!UBERON:0004733;5.46e-22;12!UBERON:0002028;5.46e-22;12!UBERON:0002771;9.16e-22;2!UBERON:0001017;3.40e-21;75!UBERON:0004732;2.68e-20;13!UBERON:0000349;1.49e-19;5!UBERON:0000200;3.29e-16;6!UBERON:0000988;3.58e-15;3!UBERON:0001016;1.20e-12;83!UBERON:0001874;9.10e-12;1!UBERON:0002021;2.79e-09;5!UBERON:0007023;5.71e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.41e-57,56;UBERON:0005068,3.41e-57,56;UBERON:0006241,3.41e-57,56;UBERON:0007135,3.41e-57,56;UBERON:0003528,1.64e-56,34;UBERON:0002020,1.64e-56,34;UBERON:0000073,1.07e-53,53;UBERON:0002616,1.07e-53,53;UBERON:0002791,7.71e-44,32;UBERON:0001869,7.71e-44,32;UBERON:0002298,8.22e-44,6;UBERON:0002420,1.37e-41,9;UBERON:0000125,1.37e-41,9;UBERON:0007245,1.37e-41,9;UBERON:0002308,1.37e-41,9;UBERON:0010009,1.37e-41,9;UBERON:0010011,1.37e-41,9;UBERON:0000454,1.37e-41,9;UBERON:0001893,3.03e-41,34;UBERON:0000955,6.10e-41,68;UBERON:0006238,6.10e-41,68;UBERON:0001017,1.33e-38,81;UBERON:0003075,1.33e-38,82;UBERON:0007284,1.33e-38,82;UBERON:0002346,9.97e-37,86;UBERON:0001016,1.30e-34,89;UBERON:0002780,4.17e-34,41;UBERON:0001890,4.17e-34,41;UBERON:0003080,4.17e-34,41;UBERON:0006240,4.17e-34,41;UBERON:0001896,3.69e-32,3;UBERON:0005290,3.69e-32,3;UBERON:0010096,3.69e-32,3;UBERON:0005383,8.62e-32,3;UBERON:0005382,8.62e-32,3;UBERON:0010371,4.76e-30,104;UBERON:0002619,3.09e-28,22;UBERON:0007023,1.70e-27,114;UBERON:0003076,5.00e-25,15;UBERON:0003057,5.00e-25,15;UBERON:0000956,6.93e-25,25;UBERON:0000203,6.93e-25,25;UBERON:0009663,3.34e-24,7;UBERON:0001871,4.24e-24,6;UBERON:0000369,4.98e-24,4;UBERON:0002435,4.98e-24,4;UBERON:0000204,4.98e-24,4;UBERON:0010082,4.98e-24,4;UBERON:0001950,8.53e-24,20;UBERON:0010314,3.07e-23,132;UBERON:0003056,1.42e-22,61;UBERON:0001876,3.17e-22,2;UBERON:0002148,3.17e-22,2;UBERON:0006331,3.17e-22,2;UBERON:0009662,3.17e-22,2;UBERON:0004733,6.11e-22,12;UBERON:0002028,6.11e-22,12;UBERON:0007277,6.11e-22,12;UBERON:0001873,6.69e-22,2;UBERON:0010122,6.69e-22,2;UBERON:0002771,1.73e-21,2;UBERON:0004732,2.97e-20,13;UBERON:0000349,1.09e-19,5;UBERON:0004121,3.32e-17,171;UBERON:0000924,3.32e-17,171;UBERON:0006601,3.32e-17,171;UBERON:0000200,3.38e-16,6;UBERON:0000025,2.84e-15,192;UBERON:0000988,3.72e-15,3;UBERON:0011216,1.29e-12,223;UBERON:0004111,9.79e-12,240;UBERON:0001874,1.07e-11,1;UBERON:0002021,2.17e-09,5;UBERON:0000483,1.17e-08,306;UBERON:0000119,1.50e-08,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0.365921118388786,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.201057944823262,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.183138929636687,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.40669416410513,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0.173624994933292,2.65722415744152,1.20596438625408,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0.104602846312333,0,0,1.80126086612937,0.684526894459965,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,1.59045937961861,0.817220436669454,0,0.550157746388935,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87848869084652,1.3223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.612691153526923,0,0,1.77213635993397,1.22026264901963,0.3755727921195,4.0138643698305,1.22021956690538,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,1.04349012362347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0.303859956177382,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,1.41696576325585,1.75597244962866,0.205116364240755,0.252071696221718,0.276629009856872,0.484426936895553,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.620060389503552,0.19024743058172,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.883606528698812,0.197318320688547,0.118193840883968,0,0,1.25692471932802,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0.237840181555137,0,0,0,0,0,0,0,0,2.35570160537934,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0.437062287854782,0,0.203977659483963,0,0,0.250707539292375,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0.365921118388786,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.201057944823262,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.183138929636687,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.40669416410513,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0.173624994933292,2.65722415744152,1.20596438625408,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0.104602846312333,0,0,1.80126086612937,0.684526894459965,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,1.59045937961861,0.817220436669454,0,0.550157746388935,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87848869084652,1.3223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.612691153526923,0,0,1.77213635993397,1.22026264901963,0.3755727921195,4.0138643698305,1.22021956690538,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,1.04349012362347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0.303859956177382,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,1.41696576325585,1.75597244962866,0.205116364240755,0.252071696221718,0.276629009856872,0.484426936895553,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.620060389503552,0.19024743058172,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.883606528698812,0.197318320688547,0.118193840883968,0,0,1.25692471932802,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0.237840181555137,0,0,0,0,0,0,0,0,2.35570160537934,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0.437062287854782,0,0.203977659483963,0,0,0.250707539292375,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:39570480..39570491,+ | |||
}} | }} |
Latest revision as of 08:01, 28 July 2015
Short description: | p@chr1:39570480..39570491, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:39570480..39570491, + |
Coexpression cluster: | C310_caudate_medulla_spinal_thalamus_locus_globus_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data