FFCP PHASE1:Hg19::chr11:60146052..60146068,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58475 | |EntrezGene=58475 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13378 | |HGNC=13378 | ||
|TSSclassifier=strong | |||
|UniProt=E9PL98 | |UniProt=E9PL98 | ||
|association_with_transcript=15bp_to_ENST00000528215_5end | |association_with_transcript=15bp_to_ENST00000528215_5end | ||
|cluster_id=chr11:60146052..60146068,+ | |||
|coexpression_cluster_id=C883 | |coexpression_cluster_id=C883 | ||
|description=CAGE_peak_4_at_MS4A7_5end | |description=CAGE_peak_4_at_MS4A7_5end | ||
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|ontology_enrichment_celltype=CL:0002009!3.58e-51!65;CL:0002194!6.56e-50!63;CL:0000576!6.56e-50!63;CL:0000040!6.56e-50!63;CL:0000559!6.56e-50!63;CL:0000557!1.11e-48!71;CL:0000839!2.41e-46!70;CL:0000766!3.39e-46!76;CL:0002057!2.95e-43!42;CL:0000763!1.39e-41!112;CL:0000049!1.39e-41!112;CL:0000860!4.86e-39!45;CL:0002087!7.34e-35!119;CL:0000037!1.07e-34!172;CL:0000566!1.07e-34!172;CL:0000738!1.15e-34!140;CL:0002031!3.12e-33!124;CL:0002032!3.97e-33!165;CL:0000837!3.97e-33!165;CL:0000988!9.32e-31!182;CL:0002393!1.32e-10!9;CL:0002397!1.32e-10!9 | |ontology_enrichment_celltype=CL:0002009!3.58e-51!65;CL:0002194!6.56e-50!63;CL:0000576!6.56e-50!63;CL:0000040!6.56e-50!63;CL:0000559!6.56e-50!63;CL:0000557!1.11e-48!71;CL:0000839!2.41e-46!70;CL:0000766!3.39e-46!76;CL:0002057!2.95e-43!42;CL:0000763!1.39e-41!112;CL:0000049!1.39e-41!112;CL:0000860!4.86e-39!45;CL:0002087!7.34e-35!119;CL:0000037!1.07e-34!172;CL:0000566!1.07e-34!172;CL:0000738!1.15e-34!140;CL:0002031!3.12e-33!124;CL:0002032!3.97e-33!165;CL:0000837!3.97e-33!165;CL:0000988!9.32e-31!182;CL:0002393!1.32e-10!9;CL:0002397!1.32e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.77e-44;48!CL:0000860;1.90e-44;33!CL:0002057;1.90e-44;33!CL:0000473;5.50e-44;39!CL:0000234;5.50e-44;39!CL:0000766;2.06e-30;69!CL:0000763;1.78e-16;100!CL:0002087;3.28e-12;104!CL:0000738;1.92e-10;136!CL:0002393;4.08e-10;6!CL:0002397;4.08e-10;6!CL:0000235;1.42e-09;6!CL:0000988;3.45e-07;177 | |ontology_enrichment_celltype_v019=CL:0000576;1.77e-44;48!CL:0000860;1.90e-44;33!CL:0002057;1.90e-44;33!CL:0000473;5.50e-44;39!CL:0000234;5.50e-44;39!CL:0000766;2.06e-30;69!CL:0000763;1.78e-16;100!CL:0002087;3.28e-12;104!CL:0000738;1.92e-10;136!CL:0002393;4.08e-10;6!CL:0002397;4.08e-10;6!CL:0000235;1.42e-09;6!CL:0000988;3.45e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.06e-80,59;CL:0000576,1.06e-80,59;CL:0000040,1.06e-80,59;CL:0000559,1.06e-80,59;CL:0002009,3.04e-80,61;CL:0000557,3.13e-71,67;CL:0000473,3.47e-71,48;CL:0000234,3.47e-71,48;CL:0000766,2.52e-70,72;CL:0000839,5.16e-70,66;CL:0000860,1.01e-62,42;CL:0002057,1.01e-62,42;CL:0000763,1.18e-52,108;CL:0000049,1.18e-52,108;CL:0002087,1.66e-44,115;CL:0000738,5.58e-40,136;CL:0002031,1.74e-38,120;CL:0000037,7.72e-37,168;CL:0002032,2.75e-34,161;CL:0000837,2.75e-34,161;CL:0000988,1.06e-33,177;CL:0002393,8.72e-15,9;CL:0002397,8.72e-15,9;CL:0000235,1.53e-09,6;CL:0000134,3.65e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-44;42!CL:0000049;6.32e-16;108 | |ontology_enrichment_development_v019=CL:0002057;1.08e-44;42!CL:0000049;6.32e-16;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.90e-52!102;UBERON:0003061!1.90e-52!102;UBERON:0002193!2.09e-47!112;UBERON:0002371!2.33e-43!80;UBERON:0007023!6.57e-41!115;UBERON:0001474!1.96e-38!86;UBERON:0002405!9.22e-34!115;UBERON:0004765!1.06e-29!101;UBERON:0001434!1.06e-29!101;UBERON:0003081!6.14e-17!216;UBERON:0001049!3.31e-14!57;UBERON:0005068!3.31e-14!57;UBERON:0006241!3.31e-14!57;UBERON:0007135!3.31e-14!57;UBERON:0003080!8.53e-12!42;UBERON:0002204!8.89e-12!167;UBERON:0002780!2.14e-11!41;UBERON:0001890!2.14e-11!41;UBERON:0006240!2.14e-11!41;UBERON:0002616!2.41e-11!59;UBERON:0001893!3.99e-09!34;UBERON:0002020!5.70e-09!34;UBERON:0003528!5.70e-09!34;UBERON:0002791!1.01e-08!33;UBERON:0000955!1.65e-08!69;UBERON:0006238!1.65e-08!69;UBERON:0003075!2.18e-08!86;UBERON:0007284!2.18e-08!86;UBERON:0001017!2.33e-08!82;UBERON:0005743!4.65e-08!86;UBERON:0001869!5.30e-08!32;UBERON:0000062!7.14e-08!511;UBERON:0000178!7.21e-08!15;UBERON:0000179!7.21e-08!15;UBERON:0000463!7.21e-08!15;UBERON:0002346!1.72e-07!90;UBERON:0001950!3.30e-07!20;UBERON:0002619!3.44e-07!22;UBERON:0000479!6.21e-07!787 | |ontology_enrichment_uberon=UBERON:0002390!1.90e-52!102;UBERON:0003061!1.90e-52!102;UBERON:0002193!2.09e-47!112;UBERON:0002371!2.33e-43!80;UBERON:0007023!6.57e-41!115;UBERON:0001474!1.96e-38!86;UBERON:0002405!9.22e-34!115;UBERON:0004765!1.06e-29!101;UBERON:0001434!1.06e-29!101;UBERON:0003081!6.14e-17!216;UBERON:0001049!3.31e-14!57;UBERON:0005068!3.31e-14!57;UBERON:0006241!3.31e-14!57;UBERON:0007135!3.31e-14!57;UBERON:0003080!8.53e-12!42;UBERON:0002204!8.89e-12!167;UBERON:0002780!2.14e-11!41;UBERON:0001890!2.14e-11!41;UBERON:0006240!2.14e-11!41;UBERON:0002616!2.41e-11!59;UBERON:0001893!3.99e-09!34;UBERON:0002020!5.70e-09!34;UBERON:0003528!5.70e-09!34;UBERON:0002791!1.01e-08!33;UBERON:0000955!1.65e-08!69;UBERON:0006238!1.65e-08!69;UBERON:0003075!2.18e-08!86;UBERON:0007284!2.18e-08!86;UBERON:0001017!2.33e-08!82;UBERON:0005743!4.65e-08!86;UBERON:0001869!5.30e-08!32;UBERON:0000062!7.14e-08!511;UBERON:0000178!7.21e-08!15;UBERON:0000179!7.21e-08!15;UBERON:0000463!7.21e-08!15;UBERON:0002346!1.72e-07!90;UBERON:0001950!3.30e-07!20;UBERON:0002619!3.44e-07!22;UBERON:0000479!6.21e-07!787 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.02e-11;15!UBERON:0000179;2.02e-11;15!UBERON:0000463;2.02e-11;15!UBERON:0002390;6.43e-09;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.02e-11;15!UBERON:0000179;2.02e-11;15!UBERON:0000463;2.02e-11;15!UBERON:0002390;6.43e-09;32 | ||
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| ||
|short_description=p4@MS4A7 | |short_description=p4@MS4A7 | ||
}} | }} |
Latest revision as of 13:31, 18 September 2015
Short description: | p4@MS4A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MS4A7_5end |
Coexpression cluster: | C883_CD14_CD14CD16_Monocytederived_spleen_Macrophage_Basophils_Peripheral |
Association with transcript: | 15bp_to_ENST00000528215_5end |
EntrezGene: | MS4A7 |
HGNC: | 13378 |
UniProt: | E9PL98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.06e-80 | 59 |
monocyte | 1.06e-80 | 59 |
monoblast | 1.06e-80 | 59 |
promonocyte | 1.06e-80 | 59 |
macrophage dendritic cell progenitor | 3.04e-80 | 61 |
granulocyte monocyte progenitor cell | 3.13e-71 | 67 |
defensive cell | 3.47e-71 | 48 |
phagocyte | 3.47e-71 | 48 |
myeloid leukocyte | 2.52e-70 | 72 |
myeloid lineage restricted progenitor cell | 5.16e-70 | 66 |
classical monocyte | 1.01e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-62 | 42 |
myeloid cell | 1.18e-52 | 108 |
common myeloid progenitor | 1.18e-52 | 108 |
nongranular leukocyte | 1.66e-44 | 115 |
leukocyte | 5.58e-40 | 136 |
hematopoietic lineage restricted progenitor cell | 1.74e-38 | 120 |
hematopoietic stem cell | 7.72e-37 | 168 |
hematopoietic oligopotent progenitor cell | 2.75e-34 | 161 |
hematopoietic multipotent progenitor cell | 2.75e-34 | 161 |
hematopoietic cell | 1.06e-33 | 177 |
intermediate monocyte | 8.72e-15 | 9 |
CD14-positive, CD16-positive monocyte | 8.72e-15 | 9 |
macrophage | 1.53e-09 | 6 |
mesenchymal cell | 3.65e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.73e-77 | 98 |
blood island | 1.73e-77 | 98 |
hemolymphoid system | 4.93e-70 | 108 |
bone marrow | 1.02e-64 | 76 |
bone element | 1.92e-58 | 82 |
immune system | 2.52e-58 | 93 |
skeletal element | 2.20e-51 | 90 |
skeletal system | 3.68e-44 | 100 |
lateral plate mesoderm | 3.79e-31 | 203 |
musculoskeletal system | 4.18e-20 | 167 |
adult organism | 1.56e-15 | 114 |
mesoderm | 1.08e-13 | 315 |
mesoderm-derived structure | 1.08e-13 | 315 |
presumptive mesoderm | 1.08e-13 | 315 |
blood | 1.89e-11 | 15 |
haemolymphatic fluid | 1.89e-11 | 15 |
organism substance | 1.89e-11 | 15 |
germ layer | 2.82e-09 | 560 |
germ layer / neural crest | 2.82e-09 | 560 |
embryonic tissue | 2.82e-09 | 560 |
presumptive structure | 2.82e-09 | 560 |
germ layer / neural crest derived structure | 2.82e-09 | 560 |
epiblast (generic) | 2.82e-09 | 560 |
embryonic structure | 5.39e-09 | 564 |
developing anatomical structure | 7.44e-08 | 581 |
embryo | 3.67e-07 | 592 |