FFCP PHASE1:Hg19::chr10:80908760..80908810,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:80908760..80908810,+ | |||
|description=CAGE_peak_at_chr10:80908760..80908810,+ | |description=CAGE_peak_at_chr10:80908760..80908810,+ | ||
|id=chr10:80908760..80908810,+ | |id=chr10:80908760..80908810,+ | ||
|ontology_enrichment_celltype=CL:0000766!7.12e-25!76;CL:0000839!1.36e-23!70;CL:0000557!9.67e-23!71;CL:0002194!2.31e-22!63;CL:0000576!2.31e-22!63;CL:0000040!2.31e-22!63;CL:0000559!2.31e-22!63;CL:0000860!1.25e-21!45;CL:0002057!2.62e-21!42;CL:0002009!1.22e-20!65;CL:0000063!3.58e-18!578;CL:0002371!4.52e-17!591;CL:0000012!7.68e-17!682;CL:0000548!9.34e-17!679;CL:0000004!9.34e-17!679;CL:0000255!9.34e-17!679;CL:0000144!3.45e-16!625;CL:0000763!1.53e-14!112;CL:0000049!1.53e-14!112;CL:0000003!7.80e-12!722;CL:0000076!2.05e-10!62 | |ontology_enrichment_celltype=CL:0000766!7.12e-25!76;CL:0000839!1.36e-23!70;CL:0000557!9.67e-23!71;CL:0002194!2.31e-22!63;CL:0000576!2.31e-22!63;CL:0000040!2.31e-22!63;CL:0000559!2.31e-22!63;CL:0000860!1.25e-21!45;CL:0002057!2.62e-21!42;CL:0002009!1.22e-20!65;CL:0000063!3.58e-18!578;CL:0002371!4.52e-17!591;CL:0000012!7.68e-17!682;CL:0000548!9.34e-17!679;CL:0000004!9.34e-17!679;CL:0000255!9.34e-17!679;CL:0000144!3.45e-16!625;CL:0000763!1.53e-14!112;CL:0000049!1.53e-14!112;CL:0000003!7.80e-12!722;CL:0000076!2.05e-10!62 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.81e-22;33!CL:0002057;1.81e-22;33!CL:0000473;1.96e-21;39!CL:0000234;1.96e-21;39!CL:0000576;8.87e-17;48!CL:0000766;6.43e-15;69!CL:0000763;6.27e-08;100 | |ontology_enrichment_celltype_v019=CL:0000860;1.81e-22;33!CL:0002057;1.81e-22;33!CL:0000473;1.96e-21;39!CL:0000234;1.96e-21;39!CL:0000576;8.87e-17;48!CL:0000766;6.43e-15;69!CL:0000763;6.27e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.64e-31,72;CL:0000839,1.29e-30,66;CL:0000473,1.34e-30,48;CL:0000234,1.34e-30,48;CL:0000557,8.54e-30,67;CL:0002194,2.66e-28,59;CL:0000576,2.66e-28,59;CL:0000040,2.66e-28,59;CL:0000559,2.66e-28,59;CL:0000860,9.92e-28,42;CL:0002057,9.92e-28,42;CL:0002009,1.17e-26,61;CL:0000763,1.30e-20,108;CL:0000049,1.30e-20,108;CL:0000076,2.56e-09,63;CL:0000738,5.12e-09,136;CL:0002031,1.05e-08,120;CL:0002087,5.29e-08,115;CL:0000037,1.25e-07,168;CL:0002032,2.10e-07,161;CL:0000837,2.10e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.90e-20;42 | |ontology_enrichment_development_v019=CL:0002057;3.90e-20;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.94e-20!80;UBERON:0003081!1.93e-19!216;UBERON:0001474!2.49e-17!86;UBERON:0002390!1.03e-15!102;UBERON:0003061!1.03e-15!102;UBERON:0004765!3.71e-15!101;UBERON:0001434!3.71e-15!101;UBERON:0002193!3.83e-15!112;UBERON:0002204!4.37e-13!167;UBERON:0002405!5.57e-11!115;UBERON:0000926!5.32e-10!448;UBERON:0004120!5.32e-10!448;UBERON:0006603!5.32e-10!448;UBERON:0000467!5.00e-08!625;UBERON:0000480!7.52e-08!626 | |ontology_enrichment_uberon=UBERON:0002371!8.94e-20!80;UBERON:0003081!1.93e-19!216;UBERON:0001474!2.49e-17!86;UBERON:0002390!1.03e-15!102;UBERON:0003061!1.03e-15!102;UBERON:0004765!3.71e-15!101;UBERON:0001434!3.71e-15!101;UBERON:0002193!3.83e-15!112;UBERON:0002204!4.37e-13!167;UBERON:0002405!5.57e-11!115;UBERON:0000926!5.32e-10!448;UBERON:0004120!5.32e-10!448;UBERON:0006603!5.32e-10!448;UBERON:0000467!5.00e-08!625;UBERON:0000480!7.52e-08!626 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.80e-25,76;UBERON:0001474,1.69e-21,82;UBERON:0004765,1.32e-19,90;UBERON:0003081,2.54e-19,203;UBERON:0002390,1.69e-18,98;UBERON:0003061,1.69e-18,98;UBERON:0002405,2.13e-18,93;UBERON:0002193,1.67e-16,108;UBERON:0001434,5.29e-16,100;UBERON:0002204,3.13e-10,167;UBERON:0000926,1.07e-09,315;UBERON:0004120,1.07e-09,315;UBERON:0006603,1.07e-09,315 | |||
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|phase1_expression=0.908391896352783,0.856402095563933,1.83240725324762,2.00146596706261,0.893922188854576,0,0,0.631719873426831,1.04474251279935,0,1.39560233594486,2.83973783769224,5.80287352102598,0.123766352960047,0,0,0,0,0.487932798790507,0.61560529038394,0.816002764977012,0.313454721478088,0,0.136874425072884,0,0,0,0,5.90046415273356,2.68680578668049,5.88301268601089,8.27479102031034,11.4458249135735,15.5296684270051,0,0,0,4.43196326825502,3.81034450193269,3.47217393145363,2.46307021663917,1.94336199611388,1.80302897343931,11.6318591023652,12.4699061417307,12.3717871205786,9.99444858694444,7.81218987241469,6.19412741790207,9.78154133895312,7.17249978281482,7.33094912654614,4.13694816883942,2.5819387343353,1.35426486594342,15.8123565215788,6.00393530127261,6.06753408001728,10.1007684482398,3.20929027076094,6.39337125799041,12.8642007072819,7.38015533200038,9.80316926225197,7.2552309657146,3.40431134814684,3.73693349397345,11.0549412712967,7.82224377630302,11.2938199246661,6.65939452896706,1.10483290796269,2.53169909952708,3.80259515361495,2.33864729961548,1.67726916406701,7.30136102452218,3.00353785683013,4.33959084082116,1.99508920618874,1.79025009479181,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0.128091319725675,0.520237390239513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,1.44575660953827,3.00802746381534,1.59331170856906,0.795285947051099,0,0.189069634328136,0.665188192387692,0.527008714158756,0.458426764241994,7.65020105414339,1.85392221392215,0.324547393654683,2.78607579678828,1.46253756570752,0.238490624305342,1.14398982156026,0.371457501329565,1.98762407366705,1.72046919021225,3.47140501607594,1.13061588384802,2.09749718104953,2.47606237746061,3.9709043641994,0.258416759169329,0,0.33472061276467,2.81980521976403,2.28081631715554,0.976248230192678,2.20597848207521,0.81014194788176,0.714397826272638,1.12264686313085,2.13961812918312,4.5994991239765,1.89853131913626,0.916008719652036,1.31780417436063,0,5.23312862571041,2.48485975847659,1.01304409331664,2.25095607382472,2.58152958673932,0.709336764396714,0.560677600142307,0,2.22000793575444,0.311211035399766,0.808264032418128,0.490385709340376,0.151357427644931,0,0,1.24864030732128,1.71141546463335,1.34503812496621,0.822041490506354,0.161872944368132,0.280901613404497,1.22492502752936,0.245668634623536,0.413303124703062,0,0.247266929278557,2.73048408581408,1.43723628363248,0,0.250237039743928,1.38532057742091,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,3.22901344239952,0.85422955527427,2.96704661623387,5.10154863343484,1.23663035086127,5.15281080091258,2.60563598864226,5.73839529620305,3.31285817548075,5.55354303337052,1.28869858099219,1.13152239773168,1.77504796258307,0.403008392910561,2.37384829234683,3.86521706326594,6.00041465299836,4.30206893083506,0,0,0,0,0,0,0,0.643240938192885,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,1.96565443335525,0,0,0.245976877086227,0.343135620597051,9.21902397432455,11.240175325762,5.62962245505133,2.87024179991442,0,6.23960871167747,0,0,0.469634776943287,1.01056513432752,0,0.761016608938393,1.58040879591855,1.71697232418975,2.46217006087397,4.44608103764552,5.94524649154913,0,6.88726725615324,3.96970272278682,6.26909658919938,7.26584846284905,8.81780162079986,2.95597942737566,9.06898870336228,14.512968087854,24.7886319877174,16.1590314785766,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0,0.2933531432838,1.29271715757778,7.15312891703765,2.535908257668,1.32969058292435,0,1.28603687131071,0,0.532844358032199,0.428933980974443,0.542621605391443,1.64648067356154,0.977208552881205,0,0,0.301439377059586,0,0.399891964728228,2.43247561282381,2.00902836572851,2.10833939483032,1.19812427745791,0,0,2.31650090668127,1.2328579353023,1.43248770591916,0,0.394061520403854,0.431255149719035,0.385029108839245,0,0,0,0,0.637938751653163,0.749007023947182,0,0.414415513436035,0,0,0,1.24782516918484,1.42743191037729,2.05013139544115,1.40569697991256,0.300946099727719,0,0,0,0.737476674166813,0.781952530212746,0.195801157462741,0,1.6541442089831,1.94142780736755,1.921096040462,1.5156378572313,3.32870879020994,2.72151263996712,0.992431231275107,3.99001130548962,1.40330047216537,0.768834895534206,1.53512174720011,1.44768529029247,0,1.69630663182921,1.42049380250502,1.72467027628999,1.03850885836724,2.32420756919918,0,3.80962293576241,1.47329582297434,0.574072240823034,0.910455840033585,0,0.902399225814824,0.0770153371044148,0.784349769176855,0,0.527758144464379,0,1.87103075804167,0,1.54227252690289,0,0.501689773854853,0.764628819135115,3.3243040357149,0.671624264166535,0,0,1.28225062558195,0.984043937099117,1.62689197332152,0.206082023295445,0.27470839445503,0.247528499761764,6.89118645595407,2.60024098414608,0,0.48335359146061,1.23238893691716,0.460511024178389,0.137836572484531,0.322260734604821,0,0.767039646744908,0.0890320356467374,4.132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| ||
|short_description=p@chr10:80908760..80908810,+ | |short_description=p@chr10:80908760..80908810,+ | ||
}} | }} |
Latest revision as of 15:53, 23 July 2015
Short description: | p@chr10:80908760..80908810, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:80908760..80908810, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.64e-31 | 72 |
myeloid lineage restricted progenitor cell | 1.29e-30 | 66 |
defensive cell | 1.34e-30 | 48 |
phagocyte | 1.34e-30 | 48 |
granulocyte monocyte progenitor cell | 8.54e-30 | 67 |
monopoietic cell | 2.66e-28 | 59 |
monocyte | 2.66e-28 | 59 |
monoblast | 2.66e-28 | 59 |
promonocyte | 2.66e-28 | 59 |
classical monocyte | 9.92e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.92e-28 | 42 |
macrophage dendritic cell progenitor | 1.17e-26 | 61 |
myeloid cell | 1.30e-20 | 108 |
common myeloid progenitor | 1.30e-20 | 108 |
squamous epithelial cell | 2.56e-09 | 63 |
leukocyte | 5.12e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 1.05e-08 | 120 |
nongranular leukocyte | 5.29e-08 | 115 |
hematopoietic stem cell | 1.25e-07 | 168 |
hematopoietic oligopotent progenitor cell | 2.10e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.10e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.80e-25 | 76 |
bone element | 1.69e-21 | 82 |
skeletal element | 1.32e-19 | 90 |
lateral plate mesoderm | 2.54e-19 | 203 |
hematopoietic system | 1.69e-18 | 98 |
blood island | 1.69e-18 | 98 |
immune system | 2.13e-18 | 93 |
hemolymphoid system | 1.67e-16 | 108 |
skeletal system | 5.29e-16 | 100 |
musculoskeletal system | 3.13e-10 | 167 |
mesoderm | 1.07e-09 | 315 |
mesoderm-derived structure | 1.07e-09 | 315 |
presumptive mesoderm | 1.07e-09 | 315 |