FFCP PHASE1:Hg19::chr20:1448681..1448685,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:1448681..1448685,+
|short_description=p@chr20:1448681..1448685,+
|description=CAGE_peak_at_chr20:1448681..1448685,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:1448681..1448685,+ | |||
|coexpression_cluster_id=C1557 | |||
|description=CAGE_peak_at_chr20:1448681..1448685,+ | |||
|id=chr20:1448681..1448685,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.47e-77!112;CL:0000049!2.47e-77!112;CL:0000766!6.02e-60!76;CL:0000037!6.76e-59!172;CL:0000566!6.76e-59!172;CL:0000557!5.73e-57!71;CL:0002032!1.99e-54!165;CL:0000837!1.99e-54!165;CL:0002057!2.66e-54!42;CL:0000988!5.76e-54!182;CL:0002009!2.15e-53!65;CL:0000839!2.21e-53!70;CL:0002194!5.31e-51!63;CL:0000576!5.31e-51!63;CL:0000040!5.31e-51!63;CL:0000559!5.31e-51!63;CL:0000860!1.25e-49!45;CL:0000738!4.67e-41!140;CL:0002031!1.76e-33!124;CL:0002087!3.19e-31!119;CL:0000134!1.35e-18!358;CL:0002320!1.14e-17!365;CL:0000219!5.86e-15!390;CL:0002393!7.49e-12!9;CL:0002397!7.49e-12!9;CL:0000034!1.25e-11!444;CL:0000048!1.07e-10!430;CL:0000723!1.35e-10!436;CL:0000094!1.79e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.70e-57;33!CL:0002057;9.70e-57;33!CL:0000473;9.31e-44;39!CL:0000234;9.31e-44;39!CL:0000576;2.21e-37;48!CL:0000766;9.13e-32;69!CL:0000763;1.02e-23;100!CL:0000094;4.79e-15;8!CL:0000767;2.05e-11;3!CL:0000081;1.00e-10;11!CL:0000738;2.80e-10;136!CL:0002087;5.57e-10;104!CL:0000226;1.07e-09;3!CL:0000842;1.07e-09;3!CL:0002393;3.78e-09;6!CL:0002397;3.78e-09;6!CL:0000988;1.70e-08;177!CL:0000097;5.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.12e-67,72;CL:0000763,8.36e-65,108;CL:0000049,8.36e-65,108;CL:0000860,3.07e-64,42;CL:0002057,3.07e-64,42;CL:0000473,6.95e-59,48;CL:0000234,6.95e-59,48;CL:0000557,6.58e-58,67;CL:0000839,2.05e-52,66;CL:0002009,5.36e-50,61;CL:0002194,1.23e-48,59;CL:0000576,1.23e-48,59;CL:0000040,1.23e-48,59;CL:0000559,1.23e-48,59;CL:0000037,7.20e-47,168;CL:0000988,7.45e-44,177;CL:0002032,1.97e-41,161;CL:0000837,1.97e-41,161;CL:0000738,2.85e-40,136;CL:0002031,3.59e-28,120;CL:0002087,2.39e-27,115;CL:0000134,2.09e-17,354;CL:0002320,8.10e-17,361;CL:0000094,4.42e-15,8;CL:0000219,9.59e-15,386;CL:0000034,6.38e-14,441;CL:0000048,3.27e-12,427;CL:0000723,7.31e-12,433;CL:0000767,2.06e-11,3;CL:0000081,9.49e-11,11;CL:0000226,2.37e-09,3;CL:0000842,2.37e-09,3;CL:0000097,5.80e-07,5;CL:0002028,5.80e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-46;42!CL:0000049;2.71e-16;108 | |||
|ontology_enrichment_disease=DOID:8692!1.26e-16!31;DOID:1240!7.94e-12!39;DOID:2531!2.35e-08!51;DOID:0060083!2.35e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.49e-51!102;UBERON:0003061!3.49e-51!102;UBERON:0002371!1.43e-50!80;UBERON:0002193!6.68e-46!112;UBERON:0001474!1.25e-45!86;UBERON:0002405!3.93e-36!115;UBERON:0004765!7.03e-36!101;UBERON:0001434!7.03e-36!101;UBERON:0002384!5.71e-17!375;UBERON:0003081!1.29e-15!216;UBERON:0002204!4.77e-15!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.99e-53,76;UBERON:0001474,1.52e-48,82;UBERON:0002390,5.33e-46,98;UBERON:0003061,5.33e-46,98;UBERON:0004765,2.22e-43,90;UBERON:0002405,1.14e-41,93;UBERON:0002193,8.56e-41,108;UBERON:0001434,4.46e-38,100;UBERON:0002204,6.59e-19,167;UBERON:0003081,5.53e-18,203;UBERON:0002384,5.14e-16,371;UBERON:0000926,5.15e-08,315;UBERON:0004120,5.15e-08,315;UBERON:0006603,5.15e-08,315 | |||
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| ||
|short_description=p@chr20:1448681..1448685,+ | |||
}} | }} |
Latest revision as of 12:00, 28 July 2015
Short description: | p@chr20:1448681..1448685, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:1448681..1448685, + |
Coexpression cluster: | C1557_Basophils_Mast_CD34_CD14_CD133_immature_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.99e-53 | 76 |
bone element | 1.52e-48 | 82 |
hematopoietic system | 5.33e-46 | 98 |
blood island | 5.33e-46 | 98 |
skeletal element | 2.22e-43 | 90 |
immune system | 1.14e-41 | 93 |
hemolymphoid system | 8.56e-41 | 108 |
skeletal system | 4.46e-38 | 100 |
musculoskeletal system | 6.59e-19 | 167 |
lateral plate mesoderm | 5.53e-18 | 203 |
connective tissue | 5.14e-16 | 371 |
mesoderm | 5.15e-08 | 315 |
mesoderm-derived structure | 5.15e-08 | 315 |
presumptive mesoderm | 5.15e-08 | 315 |