FFCP PHASE1:Hg19::chr7:139876770..139876799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80853 | |EntrezGene=80853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22224 | |HGNC=22224 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMT4 | |UniProt=Q6ZMT4 | ||
|association_with_transcript=-29bp_to_ENST00000006967,NM_030647,uc003vvm.2_5end | |association_with_transcript=-29bp_to_ENST00000006967,NM_030647,uc003vvm.2_5end | ||
|cluster_id=chr7:139876770..139876799,- | |||
|coexpression_cluster_id=C4658 | |coexpression_cluster_id=C4658 | ||
|description=CAGE_peak_1_at_JHDM1D_5end | |description=CAGE_peak_1_at_JHDM1D_5end | ||
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|ontology_enrichment_celltype=CL:0000738!1.31e-34!140;CL:0002031!2.70e-28!124;CL:0002087!7.83e-28!119;CL:0000766!8.40e-24!76;CL:0002057!2.37e-23!42;CL:0002009!9.59e-21!65;CL:0000037!1.38e-20!172;CL:0000566!1.38e-20!172;CL:0000839!3.98e-20!70;CL:0000860!5.68e-20!45;CL:0002194!1.08e-19!63;CL:0000576!1.08e-19!63;CL:0000040!1.08e-19!63;CL:0000559!1.08e-19!63;CL:0002032!2.93e-19!165;CL:0000837!2.93e-19!165;CL:0000557!3.51e-19!71;CL:0000988!9.91e-19!182;CL:0000763!8.49e-12!112;CL:0000049!8.49e-12!112;CL:0000791!7.95e-10!18;CL:0000789!7.95e-10!18;CL:0002420!7.95e-10!18;CL:0002419!7.95e-10!18;CL:0000790!7.95e-10!18;CL:0000838!6.29e-08!52;CL:0000084!9.47e-08!25;CL:0000827!9.47e-08!25;CL:0000542!1.16e-07!53;CL:0000051!1.16e-07!53 | |ontology_enrichment_celltype=CL:0000738!1.31e-34!140;CL:0002031!2.70e-28!124;CL:0002087!7.83e-28!119;CL:0000766!8.40e-24!76;CL:0002057!2.37e-23!42;CL:0002009!9.59e-21!65;CL:0000037!1.38e-20!172;CL:0000566!1.38e-20!172;CL:0000839!3.98e-20!70;CL:0000860!5.68e-20!45;CL:0002194!1.08e-19!63;CL:0000576!1.08e-19!63;CL:0000040!1.08e-19!63;CL:0000559!1.08e-19!63;CL:0002032!2.93e-19!165;CL:0000837!2.93e-19!165;CL:0000557!3.51e-19!71;CL:0000988!9.91e-19!182;CL:0000763!8.49e-12!112;CL:0000049!8.49e-12!112;CL:0000791!7.95e-10!18;CL:0000789!7.95e-10!18;CL:0002420!7.95e-10!18;CL:0002419!7.95e-10!18;CL:0000790!7.95e-10!18;CL:0000838!6.29e-08!52;CL:0000084!9.47e-08!25;CL:0000827!9.47e-08!25;CL:0000542!1.16e-07!53;CL:0000051!1.16e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.19e-18;33!CL:0002057;2.19e-18;33!CL:0000473;4.35e-17;39!CL:0000234;4.35e-17;39!CL:0000576;4.23e-14;48!CL:0000766;4.12e-12;69!CL:0000791;5.29e-10;18!CL:0000789;5.29e-10;18!CL:0002419;5.29e-10;18!CL:0002087;1.43e-09;104!CL:0000738;1.05e-08;136!CL:0000084;4.62e-08;25 | |ontology_enrichment_celltype_v019=CL:0000860;2.19e-18;33!CL:0002057;2.19e-18;33!CL:0000473;4.35e-17;39!CL:0000234;4.35e-17;39!CL:0000576;4.23e-14;48!CL:0000766;4.12e-12;69!CL:0000791;5.29e-10;18!CL:0000789;5.29e-10;18!CL:0002419;5.29e-10;18!CL:0002087;1.43e-09;104!CL:0000738;1.05e-08;136!CL:0000084;4.62e-08;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.09e-38,136;CL:0002031,4.57e-32,120;CL:0002087,7.70e-32,115;CL:0000766,1.05e-27,72;CL:0000473,1.16e-25,48;CL:0000234,1.16e-25,48;CL:0002009,7.26e-25,61;CL:0000037,3.05e-24,168;CL:0000860,8.75e-24,42;CL:0002057,8.75e-24,42;CL:0000839,9.31e-24,66;CL:0002194,9.71e-24,59;CL:0000576,9.71e-24,59;CL:0000040,9.71e-24,59;CL:0000559,9.71e-24,59;CL:0000557,7.62e-23,67;CL:0002032,7.94e-23,161;CL:0000837,7.94e-23,161;CL:0000988,1.13e-22,177;CL:0000763,1.20e-14,108;CL:0000049,1.20e-14,108;CL:0000791,5.45e-10,18;CL:0000789,5.45e-10,18;CL:0002420,5.45e-10,18;CL:0002419,5.45e-10,18;CL:0000790,5.45e-10,18;CL:0000838,2.23e-08,52;CL:0000542,4.27e-08,53;CL:0000051,4.27e-08,53;CL:0000084,7.13e-08,25;CL:0000827,7.13e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002057;2.62e-17;42!CL:0000790;5.29e-10;18 | |ontology_enrichment_development_v019=CL:0002057;2.62e-17;42!CL:0000790;5.29e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.82e-24!102;UBERON:0003061!1.82e-24!102;UBERON:0002193!2.63e-21!112;UBERON:0002371!5.70e-17!80;UBERON:0007023!4.01e-15!115;UBERON:0001474!5.23e-15!86;UBERON:0002405!2.63e-14!115;UBERON:0004765!3.52e-11!101;UBERON:0001434!3.52e-11!101;UBERON:0000178!3.07e-08!15;UBERON:0000179!3.07e-08!15;UBERON:0000463!3.07e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!1.82e-24!102;UBERON:0003061!1.82e-24!102;UBERON:0002193!2.63e-21!112;UBERON:0002371!5.70e-17!80;UBERON:0007023!4.01e-15!115;UBERON:0001474!5.23e-15!86;UBERON:0002405!2.63e-14!115;UBERON:0004765!3.52e-11!101;UBERON:0001434!3.52e-11!101;UBERON:0000178!3.07e-08!15;UBERON:0000179!3.07e-08!15;UBERON:0000463!3.07e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.28e-08;15!UBERON:0000179;2.28e-08;15!UBERON:0000463;2.28e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.28e-08;15!UBERON:0000179;2.28e-08;15!UBERON:0000463;2.28e-08;15 | ||
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| ||
|short_description=p1@JHDM1D | |short_description=p1@JHDM1D | ||
}} | }} |
Latest revision as of 17:26, 16 September 2015
Short description: | p1@JHDM1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JHDM1D_5end |
Coexpression cluster: | C4658_Neutrophils_small_Eosinophils_CD14_neuroectodermal_Whole_Peripheral |
Association with transcript: | -29bp_to_ENST00000006967, NM_030647, uc003vvm.2_5end |
EntrezGene: | JHDM1D |
HGNC: | 22224 |
UniProt: | Q6ZMT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.45e-28 | 98 |
blood island | 2.45e-28 | 98 |
hemolymphoid system | 1.42e-24 | 108 |
bone marrow | 2.55e-20 | 76 |
immune system | 6.08e-18 | 93 |
bone element | 8.89e-18 | 82 |
adult organism | 2.58e-15 | 114 |
skeletal element | 4.55e-15 | 90 |
skeletal system | 3.64e-12 | 100 |
blood | 2.26e-08 | 15 |
haemolymphatic fluid | 2.26e-08 | 15 |
organism substance | 2.26e-08 | 15 |