FFCP PHASE1:Hg19::chr13:99964907..99964918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=337867 | |EntrezGene=337867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20486 | |HGNC=20486 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-118bp_to_ENST00000460562_5end | |association_with_transcript=-118bp_to_ENST00000460562_5end | ||
|cluster_id=chr13:99964907..99964918,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_11_at_UBAC2_5end | |description=CAGE_peak_11_at_UBAC2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!2.59e-72!42;CL:0000860!8.78e-67!45;CL:0002009!1.03e-53!65;CL:0002194!2.16e-49!63;CL:0000576!2.16e-49!63;CL:0000040!2.16e-49!63;CL:0000559!2.16e-49!63;CL:0000557!2.81e-48!71;CL:0000766!4.48e-44!76;CL:0000839!1.92e-43!70;CL:0000763!1.92e-37!112;CL:0000049!1.92e-37!112;CL:0000738!7.54e-37!140;CL:0002031!3.41e-32!124;CL:0002087!5.28e-32!119;CL:0002032!2.55e-29!165;CL:0000837!2.55e-29!165;CL:0000037!5.95e-29!172;CL:0000566!5.95e-29!172;CL:0000988!1.30e-26!182;CL:0000453!1.65e-13!5;CL:0000134!4.63e-12!358;CL:0002320!1.49e-11!365;CL:0000990!3.40e-10!8;CL:0000219!9.00e-10!390;CL:0000451!3.38e-08!10;CL:0000048!1.13e-07!430;CL:0000723!2.22e-07!436;CL:0000034!5.31e-07!444;CL:0002393!6.06e-07!9;CL:0002397!6.06e-07!9;CL:0001014!8.56e-07!2;CL:0001016!8.56e-07!2 | |ontology_enrichment_celltype=CL:0002057!2.59e-72!42;CL:0000860!8.78e-67!45;CL:0002009!1.03e-53!65;CL:0002194!2.16e-49!63;CL:0000576!2.16e-49!63;CL:0000040!2.16e-49!63;CL:0000559!2.16e-49!63;CL:0000557!2.81e-48!71;CL:0000766!4.48e-44!76;CL:0000839!1.92e-43!70;CL:0000763!1.92e-37!112;CL:0000049!1.92e-37!112;CL:0000738!7.54e-37!140;CL:0002031!3.41e-32!124;CL:0002087!5.28e-32!119;CL:0002032!2.55e-29!165;CL:0000837!2.55e-29!165;CL:0000037!5.95e-29!172;CL:0000566!5.95e-29!172;CL:0000988!1.30e-26!182;CL:0000453!1.65e-13!5;CL:0000134!4.63e-12!358;CL:0002320!1.49e-11!365;CL:0000990!3.40e-10!8;CL:0000219!9.00e-10!390;CL:0000451!3.38e-08!10;CL:0000048!1.13e-07!430;CL:0000723!2.22e-07!436;CL:0000034!5.31e-07!444;CL:0002393!6.06e-07!9;CL:0002397!6.06e-07!9;CL:0001014!8.56e-07!2;CL:0001016!8.56e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.81e-107;33!CL:0002057;2.81e-107;33!CL:0000473;2.23e-74;39!CL:0000234;2.23e-74;39!CL:0000576;4.85e-54;48!CL:0000766;6.78e-32;69!CL:0000763;3.28e-15;100!CL:0002087;8.92e-15;104!CL:0001014;9.21e-14;2!CL:0001016;9.21e-14;2!CL:0000738;1.77e-09;136 | |ontology_enrichment_celltype_v019=CL:0000860;2.81e-107;33!CL:0002057;2.81e-107;33!CL:0000473;2.23e-74;39!CL:0000234;2.23e-74;39!CL:0000576;4.85e-54;48!CL:0000766;6.78e-32;69!CL:0000763;3.28e-15;100!CL:0002087;8.92e-15;104!CL:0001014;9.21e-14;2!CL:0001016;9.21e-14;2!CL:0000738;1.77e-09;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.94e-96,42;CL:0002057,2.94e-96,42;CL:0000473,1.23e-83,48;CL:0000234,1.23e-83,48;CL:0002009,1.63e-74,61;CL:0000557,1.67e-67,67;CL:0002194,5.90e-66,59;CL:0000576,5.90e-66,59;CL:0000040,5.90e-66,59;CL:0000559,5.90e-66,59;CL:0000839,1.46e-58,66;CL:0000766,2.36e-53,72;CL:0000763,2.19e-43,108;CL:0000049,2.19e-43,108;CL:0002031,1.25e-38,120;CL:0002087,1.55e-34,115;CL:0000738,1.62e-33,136;CL:0002032,9.64e-30,161;CL:0000837,9.64e-30,161;CL:0000037,2.71e-28,168;CL:0000988,1.35e-26,177;CL:0001014,9.23e-14,2;CL:0001016,9.23e-14,2;CL:0000134,1.17e-11,354;CL:0002320,2.51e-11,361;CL:0000219,3.77e-10,386;CL:0000048,1.04e-08,427;CL:0000723,1.65e-08,433;CL:0000034,2.98e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.76e-75;42!CL:0000049;4.83e-11;108 | |ontology_enrichment_development_v019=CL:0002057;8.76e-75;42!CL:0000049;4.83e-11;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.20e-44!80;UBERON:0001474!2.20e-42!86;UBERON:0002390!4.66e-38!102;UBERON:0003061!4.66e-38!102;UBERON:0004765!2.63e-36!101;UBERON:0001434!2.63e-36!101;UBERON:0002405!3.43e-34!115;UBERON:0002193!1.31e-33!112;UBERON:0002204!1.82e-17!167;UBERON:0003081!1.22e-13!216;UBERON:0002384!1.69e-11!375 | |ontology_enrichment_uberon=UBERON:0002371!4.20e-44!80;UBERON:0001474!2.20e-42!86;UBERON:0002390!4.66e-38!102;UBERON:0003061!4.66e-38!102;UBERON:0004765!2.63e-36!101;UBERON:0001434!2.63e-36!101;UBERON:0002405!3.43e-34!115;UBERON:0002193!1.31e-33!112;UBERON:0002204!1.82e-17!167;UBERON:0003081!1.22e-13!216;UBERON:0002384!1.69e-11!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.92e-59,76;UBERON:0001474,2.09e-54,82;UBERON:0002405,2.61e-51,93;UBERON:0004765,3.48e-49,90;UBERON:0002390,1.84e-48,98;UBERON:0003061,1.84e-48,98;UBERON:0001434,8.12e-44,100;UBERON:0002193,1.50e-43,108;UBERON:0002204,2.65e-24,167;UBERON:0003081,7.59e-21,203;UBERON:0000926,1.49e-11,315;UBERON:0004120,1.49e-11,315;UBERON:0006603,1.49e-11,315;UBERON:0002384,7.17e-11,371 | |||
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| ||
|short_description=p11@UBAC2 | |short_description=p11@UBAC2 | ||
}} | }} |
Latest revision as of 08:44, 18 September 2015
Short description: | p11@UBAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_UBAC2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -118bp_to_ENST00000460562_5end |
EntrezGene: | UBAC2 |
HGNC: | 20486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.94e-96 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.94e-96 | 42 |
defensive cell | 1.23e-83 | 48 |
phagocyte | 1.23e-83 | 48 |
macrophage dendritic cell progenitor | 1.63e-74 | 61 |
granulocyte monocyte progenitor cell | 1.67e-67 | 67 |
monopoietic cell | 5.90e-66 | 59 |
monocyte | 5.90e-66 | 59 |
monoblast | 5.90e-66 | 59 |
promonocyte | 5.90e-66 | 59 |
myeloid lineage restricted progenitor cell | 1.46e-58 | 66 |
myeloid leukocyte | 2.36e-53 | 72 |
myeloid cell | 2.19e-43 | 108 |
common myeloid progenitor | 2.19e-43 | 108 |
hematopoietic lineage restricted progenitor cell | 1.25e-38 | 120 |
nongranular leukocyte | 1.55e-34 | 115 |
leukocyte | 1.62e-33 | 136 |
hematopoietic oligopotent progenitor cell | 9.64e-30 | 161 |
hematopoietic multipotent progenitor cell | 9.64e-30 | 161 |
hematopoietic stem cell | 2.71e-28 | 168 |
hematopoietic cell | 1.35e-26 | 177 |
CD1a-positive Langerhans cell | 9.23e-14 | 2 |
immature CD1a-positive Langerhans cell | 9.23e-14 | 2 |
mesenchymal cell | 1.17e-11 | 354 |
connective tissue cell | 2.51e-11 | 361 |
motile cell | 3.77e-10 | 386 |
multi fate stem cell | 1.04e-08 | 427 |
somatic stem cell | 1.65e-08 | 433 |
stem cell | 2.98e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.92e-59 | 76 |
bone element | 2.09e-54 | 82 |
immune system | 2.61e-51 | 93 |
skeletal element | 3.48e-49 | 90 |
hematopoietic system | 1.84e-48 | 98 |
blood island | 1.84e-48 | 98 |
skeletal system | 8.12e-44 | 100 |
hemolymphoid system | 1.50e-43 | 108 |
musculoskeletal system | 2.65e-24 | 167 |
lateral plate mesoderm | 7.59e-21 | 203 |
mesoderm | 1.49e-11 | 315 |
mesoderm-derived structure | 1.49e-11 | 315 |
presumptive mesoderm | 1.49e-11 | 315 |
connective tissue | 7.17e-11 | 371 |