FFCP PHASE1:Hg19::chr18:3448730..3448744,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:3448730..3448744,+ | |||
|coexpression_cluster_id=C3718 | |coexpression_cluster_id=C3718 | ||
|description=CAGE_peak_at_chr18:3448730..3448744,+ | |description=CAGE_peak_at_chr18:3448730..3448744,+ | ||
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|ontology_enrichment_celltype=CL:0000860!2.60e-27!45;CL:0002057!2.78e-26!42;CL:0000766!2.03e-21!76;CL:0000839!2.35e-19!70;CL:0000557!2.77e-19!71;CL:0000738!1.70e-18!140;CL:0002009!1.35e-17!65;CL:0002194!1.95e-17!63;CL:0000576!1.95e-17!63;CL:0000040!1.95e-17!63;CL:0000559!1.95e-17!63;CL:0000763!2.59e-17!112;CL:0000049!2.59e-17!112;CL:0000037!3.04e-16!172;CL:0000566!3.04e-16!172;CL:0000034!1.57e-15!444;CL:0002031!1.73e-15!124;CL:0000063!1.91e-15!578;CL:0000012!3.96e-15!682;CL:0002032!3.98e-15!165;CL:0000837!3.98e-15!165;CL:0000134!5.14e-15!358;CL:0000723!1.18e-14!436;CL:0000003!2.10e-14!722;CL:0000048!2.61e-14!430;CL:0002087!4.77e-14!119;CL:0002320!4.81e-14!365;CL:0000548!6.64e-14!679;CL:0000004!6.64e-14!679;CL:0000255!6.64e-14!679;CL:0000988!1.54e-13!182;CL:0000219!2.24e-12!390;CL:0000144!3.07e-12!625;CL:0002371!2.42e-11!591 | |ontology_enrichment_celltype=CL:0000860!2.60e-27!45;CL:0002057!2.78e-26!42;CL:0000766!2.03e-21!76;CL:0000839!2.35e-19!70;CL:0000557!2.77e-19!71;CL:0000738!1.70e-18!140;CL:0002009!1.35e-17!65;CL:0002194!1.95e-17!63;CL:0000576!1.95e-17!63;CL:0000040!1.95e-17!63;CL:0000559!1.95e-17!63;CL:0000763!2.59e-17!112;CL:0000049!2.59e-17!112;CL:0000037!3.04e-16!172;CL:0000566!3.04e-16!172;CL:0000034!1.57e-15!444;CL:0002031!1.73e-15!124;CL:0000063!1.91e-15!578;CL:0000012!3.96e-15!682;CL:0002032!3.98e-15!165;CL:0000837!3.98e-15!165;CL:0000134!5.14e-15!358;CL:0000723!1.18e-14!436;CL:0000003!2.10e-14!722;CL:0000048!2.61e-14!430;CL:0002087!4.77e-14!119;CL:0002320!4.81e-14!365;CL:0000548!6.64e-14!679;CL:0000004!6.64e-14!679;CL:0000255!6.64e-14!679;CL:0000988!1.54e-13!182;CL:0000219!2.24e-12!390;CL:0000144!3.07e-12!625;CL:0002371!2.42e-11!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.72e-32;33!CL:0002057;3.72e-32;33!CL:0000576;1.04e-22;48!CL:0000473;2.42e-21;39!CL:0000234;2.42e-21;39!CL:0000766;1.86e-16;69!CL:0002087;3.54e-09;104!CL:0000763;5.20e-09;100!CL:0002393;5.12e-08;6!CL:0002397;5.12e-08;6!CL:0000738;8.91e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;3.72e-32;33!CL:0002057;3.72e-32;33!CL:0000576;1.04e-22;48!CL:0000473;2.42e-21;39!CL:0000234;2.42e-21;39!CL:0000766;1.86e-16;69!CL:0002087;3.54e-09;104!CL:0000763;5.20e-09;100!CL:0002393;5.12e-08;6!CL:0002397;5.12e-08;6!CL:0000738;8.91e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.24e-44,42;CL:0002057,8.24e-44,42;CL:0000473,4.43e-36,48;CL:0000234,4.43e-36,48;CL:0000766,3.90e-32,72;CL:0000557,8.06e-29,67;CL:0000738,8.86e-29,136;CL:0000839,3.90e-28,66;CL:0002009,6.56e-27,61;CL:0002194,1.15e-26,59;CL:0000576,1.15e-26,59;CL:0000040,1.15e-26,59;CL:0000559,1.15e-26,59;CL:0000037,1.08e-24,168;CL:0002031,1.89e-24,120;CL:0000763,3.31e-24,108;CL:0000049,3.31e-24,108;CL:0002087,1.03e-23,115;CL:0002032,2.00e-23,161;CL:0000837,2.00e-23,161;CL:0000988,5.27e-22,177;CL:0000134,1.60e-17,354;CL:0002320,6.74e-17,361;CL:0000034,1.59e-15,441;CL:0000048,4.18e-15,427;CL:0000723,6.20e-15,433;CL:0000219,2.94e-14,386;CL:0002393,5.26e-10,9;CL:0002397,5.26e-10,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.96e-32;42!CL:0000049;1.34e-07;108 | |ontology_enrichment_development_v019=CL:0002057;8.96e-32;42!CL:0000049;1.34e-07;108 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.67e-17!80;UBERON:0001474!2.35e-16!86;UBERON:0002384!6.88e-13!375;UBERON:0004765!2.41e-12!101;UBERON:0001434!2.41e-12!101;UBERON:0002390!5.51e-11!102;UBERON:0003061!5.51e-11!102;UBERON:0002405!1.52e-10!115;UBERON:0002204!1.75e-08!167;UBERON:0003081!2.03e-08!216;UBERON:0002193!2.94e-08!112 | |ontology_enrichment_uberon=UBERON:0002371!2.67e-17!80;UBERON:0001474!2.35e-16!86;UBERON:0002384!6.88e-13!375;UBERON:0004765!2.41e-12!101;UBERON:0001434!2.41e-12!101;UBERON:0002390!5.51e-11!102;UBERON:0003061!5.51e-11!102;UBERON:0002405!1.52e-10!115;UBERON:0002204!1.75e-08!167;UBERON:0003081!2.03e-08!216;UBERON:0002193!2.94e-08!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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|phase1_expression=0.181678379270557,0.428201047781966,0.986680828671798,0,0,1.74467704820074,2.53299878168311,0,0,1.22866968250754,0.697801167972428,0,0.527533956456907,0.618831764800233,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0.286235987131057,0.273748850145768,0.502170558379211,0.229240217243854,0.0821005894499457,0,10.2274711980715,5.75744097145819,10.9919447554414,0.919421224478927,0.6024118375565,1.47901604066715,0,0,0.587200878669695,10.5259127621057,14.4392002178502,12.8036413722353,0,0.647787332037959,0,6.39752250630085,3.02300754951048,4.60909716256851,9.0647324393217,4.93401465626191,8.6717783850629,10.3569261235974,5.12321413058201,8.0403958162119,19.9952494827239,11.6187243045089,25.7310324529249,9.97684399575805,4.09359225086769,6.51698104890745,17.4467818651414,4.17207735198922,21.0981251513684,5.60747210317417,4.3882004676759,7.2458207590558,10.1573233520004,3.40431134814684,4.9825779919646,6.53246529667532,7.30076085788282,6.73285418585862,3.02699751316684,2.20966581592539,5.06339819905415,4.85887158517466,4.46469029926591,8.17668717482666,8.98629049171961,4.05477610672067,2.4108838004562,3.13514018115373,1.39241674039363,2.55729815270488,0,0.546138611262131,0,1.70692089026603,0.800791974072025,1.72425731986345,1.98313461835459,0.954053754535364,7.39976859842283,4.69789751496751,5.73409842187843,3.96513985737078,2.80254281490768,1.58030450865046,1.57367816091066,5.89516144123747,4.5232329779892,0,3.91106719960308,1.4203434172042,1.94826728407911,0.334231370655521,1.17842362989935,0.221533894583621,0.812411591295047,0,0.390178042679635,0.164437904603676,1.38175008892924,0.289803085735052,2.22429844743091,0.267540828089713,2.09071047609954,0.453237370790265,2.29932296161153,2.06176467289578,2.27717722817553,0.637130828648193,0.651083453856419,0,0.903450714466637,0.895906278080929,0,0.236777252044017,0,5.64498881029251,11.4999284186908,4.63438092424957,0,4.02420515822182,0.255725123687061,0,0.50133791063589,0.434539556882471,0,0.486634870302636,0.378139268656271,0.665188192387692,0.614843499851882,0.523916301990851,0,0.741568885568859,0.324547393654683,0.174129737299267,0.531831842075461,0.476981248610684,1.71598473234038,0.74291500265913,1.78886166630035,0,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,0.367663080345869,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0.949265659568129,0.366403487860815,5.27121669744253,15.511210565933,1.3082821564276,0,0.12663051166458,6.88527740228738,2.29469296599051,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0.808264032418128,0.490385709340376,0.151357427644931,0.576175924479999,0,0.936480230490962,0,0.597794722207204,0.23486899728753,0.161872944368132,0.421352420106746,0.204154171254893,0.122834317311768,0.309977343527296,0,0.989067717114227,0,0,0.505008341862199,0.500474079487857,0.277064115484183,0,0.30648779579902,0.150238058906597,0.226864366320042,0.89694817844431,0,0,2.70081986475962,0,4.3798891807757,0.558350568994769,1.35021065793013,0.389748020644795,2.01947019395292,0.276149695926898,0.323292113637624,3.19508633264953,0,0,0.193260853163297,0,0,0.243947412259191,0.265059536642971,0.464775771478074,0.518305275076852,0.252320850875628,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0.721879481669586,1.53798840051797,0.337169380156203,0.723033089650446,1.10293972732394,0,1.18635309555548,0.269662616320329,0.98110732562673,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0,0.614942192715568,0.857839051492628,0.329250856225877,5.62008766288098,0.502644862058154,0.555530670951178,0.977424915930974,1.03993478527958,0,0,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,1.58040879591855,3.43394464837949,0.246217006087397,0.234004265139238,0.148631162288728,0,0.335964256397719,0.141775097242386,0.806026704325635,1.16253575405585,1.91691339582606,0.492663237895943,0.352193736052904,3.31724984865235,13.2590357143605,10.4781219743895,0.825472625798197,1.14596527667483,0,3.4214489204541,0.411309970813294,0.901029173531752,0,0.112131084345361,0.43596006883328,0.1466765716419,0.775630294546667,3.57656445851882,0.845302752556,0,0,0,0,0.532844358032199,1.71573592389777,1.62786481617433,0,0,2.13235169245527,1.58390374586686,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0,0,0,4.53170748464433,12.075144192133,8.2139543219039,0.254094624222463,0,0,0.167516265334349,0,1.49801404789436,0,0.828831026872071,0,0,1.08506009479894,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0.195801157462741,0,1.44737618286021,7.11856862701436,1.60091336705167,1.21251028578504,1.66435439510497,0.907170879989041,0.496215615637554,3.06923946576125,0.280660094433074,0.640695746278505,0.511707249066704,0.482561763430822,1.48418066444991,0.154209693802656,1.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| ||
|short_description=p@chr18:3448730..3448744,+ | |short_description=p@chr18:3448730..3448744,+ | ||
}} | }} |
Latest revision as of 00:41, 26 July 2015
Short description: | p@chr18:3448730..3448744, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:3448730..3448744, + |
Coexpression cluster: | C3718_CD14_Mast_Natural_Eosinophils_Basophils_CD8_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.24e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.24e-44 | 42 |
defensive cell | 4.43e-36 | 48 |
phagocyte | 4.43e-36 | 48 |
myeloid leukocyte | 3.90e-32 | 72 |
granulocyte monocyte progenitor cell | 8.06e-29 | 67 |
leukocyte | 8.86e-29 | 136 |
myeloid lineage restricted progenitor cell | 3.90e-28 | 66 |
macrophage dendritic cell progenitor | 6.56e-27 | 61 |
monopoietic cell | 1.15e-26 | 59 |
monocyte | 1.15e-26 | 59 |
monoblast | 1.15e-26 | 59 |
promonocyte | 1.15e-26 | 59 |
hematopoietic stem cell | 1.08e-24 | 168 |
hematopoietic lineage restricted progenitor cell | 1.89e-24 | 120 |
myeloid cell | 3.31e-24 | 108 |
common myeloid progenitor | 3.31e-24 | 108 |
nongranular leukocyte | 1.03e-23 | 115 |
hematopoietic oligopotent progenitor cell | 2.00e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-23 | 161 |
hematopoietic cell | 5.27e-22 | 177 |
mesenchymal cell | 1.60e-17 | 354 |
connective tissue cell | 6.74e-17 | 361 |
stem cell | 1.59e-15 | 441 |
multi fate stem cell | 4.18e-15 | 427 |
somatic stem cell | 6.20e-15 | 433 |
motile cell | 2.94e-14 | 386 |
intermediate monocyte | 5.26e-10 | 9 |
CD14-positive, CD16-positive monocyte | 5.26e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.18e-26 | 76 |
bone element | 9.41e-26 | 82 |
skeletal element | 1.32e-22 | 90 |
hematopoietic system | 2.19e-20 | 98 |
blood island | 2.19e-20 | 98 |
immune system | 1.99e-19 | 93 |
skeletal system | 1.85e-18 | 100 |
hemolymphoid system | 9.26e-17 | 108 |
connective tissue | 2.75e-16 | 371 |
lateral plate mesoderm | 9.49e-13 | 203 |
musculoskeletal system | 1.21e-11 | 167 |