FFCP PHASE1:Hg19::chr3:170150547..170150552,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:170150547..170150552,+ | |||
|coexpression_cluster_id=C635 | |coexpression_cluster_id=C635 | ||
|description=CAGE_peak_at_chr3:170150547..170150552,+ | |description=CAGE_peak_at_chr3:170150547..170150552,+ | ||
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|ontology_enrichment_celltype=CL:0000222!5.80e-08!119;CL:0000055!7.64e-08!180;CL:0002570!3.82e-07!8 | |ontology_enrichment_celltype=CL:0000222!5.80e-08!119;CL:0000055!7.64e-08!180;CL:0002570!3.82e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002622;1.64e-20;3!CL:0002583;1.11e-14;2!CL:0002575;2.87e-14;2!CL:0002564;3.81e-10;3!CL:0002582;4.36e-10;3!CL:0000135;8.18e-10;3!CL:0000388;8.18e-10;3!CL:0002334;2.63e-09;12!CL:0002570;3.35e-08;8!CL:0000669;1.43e-07;4 | |ontology_enrichment_celltype_v019=CL:0002622;1.64e-20;3!CL:0002583;1.11e-14;2!CL:0002575;2.87e-14;2!CL:0002564;3.81e-10;3!CL:0002582;4.36e-10;3!CL:0000135;8.18e-10;3!CL:0000388;8.18e-10;3!CL:0002334;2.63e-09;12!CL:0002570;3.35e-08;8!CL:0000669;1.43e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002622,3.12e-20,3;CL:0002583,7.93e-15,2;CL:0002575,1.57e-14,2;CL:0002564,2.31e-10,3;CL:0000135,4.18e-10,3;CL:0000388,4.18e-10,3;CL:0002582,6.28e-10,3;CL:0002334,2.82e-09,12;CL:0002570,3.85e-08,8;CL:0000669,1.07e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.58e-08;1 | |ontology_enrichment_development_v019=UBERON:0005425;5.58e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;7.80e-13;5!UBERON:0002216;7.80e-13;5!UBERON:0011134;7.80e-13;5!UBERON:0002209;7.80e-13;5!UBERON:0002213;7.80e-13;5!UBERON:0007844;7.80e-13;5!UBERON:0011138;7.80e-13;5!UBERON:0001130;7.80e-13;5!UBERON:0001066;7.80e-13;5!UBERON:0001468;7.80e-13;5!UBERON:0002242;3.81e-10;3!UBERON:0002367;7.44e-10;11!UBERON:0010147;7.44e-10;11!UBERON:0007846;8.18e-10;3!UBERON:0000043;8.18e-10;3!UBERON:0007845;8.18e-10;3!UBERON:0003937;4.81e-09;12!UBERON:0005399;4.81e-09;12!UBERON:0004905;3.35e-08;8!UBERON:0000982;3.35e-08;8!UBERON:0004770;3.35e-08;8!UBERON:0000941;5.58e-08;1!UBERON:0001785;5.58e-08;1!UBERON:0002464;5.58e-08;1!UBERON:0004904;5.58e-08;1!UBERON:0001021;5.58e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0011135;7.80e-13;5!UBERON:0002216;7.80e-13;5!UBERON:0011134;7.80e-13;5!UBERON:0002209;7.80e-13;5!UBERON:0002213;7.80e-13;5!UBERON:0007844;7.80e-13;5!UBERON:0011138;7.80e-13;5!UBERON:0001130;7.80e-13;5!UBERON:0001066;7.80e-13;5!UBERON:0001468;7.80e-13;5!UBERON:0002242;3.81e-10;3!UBERON:0002367;7.44e-10;11!UBERON:0010147;7.44e-10;11!UBERON:0007846;8.18e-10;3!UBERON:0000043;8.18e-10;3!UBERON:0007845;8.18e-10;3!UBERON:0003937;4.81e-09;12!UBERON:0005399;4.81e-09;12!UBERON:0004905;3.35e-08;8!UBERON:0000982;3.35e-08;8!UBERON:0004770;3.35e-08;8!UBERON:0000941;5.58e-08;1!UBERON:0001785;5.58e-08;1!UBERON:0002464;5.58e-08;1!UBERON:0004904;5.58e-08;1!UBERON:0001021;5.58e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,5.34e-13,5;UBERON:0002216,5.34e-13,5;UBERON:0011134,5.34e-13,5;UBERON:0002209,5.34e-13,5;UBERON:0002213,5.34e-13,5;UBERON:0005856,5.34e-13,5;UBERON:0005866,5.34e-13,5;UBERON:0005863,5.34e-13,5;UBERON:0007844,5.34e-13,5;UBERON:0011138,5.34e-13,5;UBERON:0001130,5.34e-13,5;UBERON:0001066,5.34e-13,5;UBERON:0001468,5.34e-13,5;UBERON:0002242,2.31e-10,3;UBERON:0003068,2.31e-10,3;UBERON:0002328,2.31e-10,3;UBERON:0004880,2.31e-10,3;UBERON:0007846,4.18e-10,3;UBERON:0000043,4.18e-10,3;UBERON:0007845,4.18e-10,3;UBERON:0002367,7.82e-10,11;UBERON:0010147,7.82e-10,11;UBERON:0009846,7.82e-10,11;UBERON:0003353,7.82e-10,11;UBERON:0004902,7.82e-10,11;UBERON:0003820,7.82e-10,11;UBERON:0009847,7.82e-10,11;UBERON:0003937,5.03e-09,12;UBERON:0005399,5.03e-09,12;UBERON:0004905,2.66e-08,8;UBERON:0000982,2.66e-08,8;UBERON:0004770,2.66e-08,8;UBERON:0003064,5.39e-08,28;UBERON:0000941,5.40e-08,1;UBERON:0001785,5.40e-08,1;UBERON:0002464,5.40e-08,1;UBERON:0004904,5.40e-08,1;UBERON:0001021,5.40e-08,1;UBERON:0003902,5.40e-08,1;UBERON:0005425,5.40e-08,1;UBERON:0000162,9.44e-08,14;UBERON:0001353,9.44e-08,14;UBERON:0000163,9.44e-08,14;UBERON:0006866,9.44e-08,14;UBERON:0000164,9.44e-08,14;UBERON:0000931,9.44e-08,14;UBERON:0004122,3.06e-07,15 | |||
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| ||
|short_description=p@chr3:170150547..170150552,+ | |short_description=p@chr3:170150547..170150552,+ | ||
}} | }} |
Latest revision as of 18:10, 29 July 2015
Short description: | p@chr3:170150547..170150552, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170150547..170150552, + |
Coexpression cluster: | C635_Fibroblast_Pericytes_Nucleus_Preadipocyte_Smooth_mesothelioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 3.12e-20 | 3 |
subcutaneous preadipocyte | 7.93e-15 | 2 |
central nervous system pericyte | 1.57e-14 | 2 |
nucleus pulposus cell of intervertebral disc | 2.31e-10 | 3 |
fibrocyte | 4.18e-10 | 3 |
tendon cell | 4.18e-10 | 3 |
visceral preadipocyte | 6.28e-10 | 3 |
preadipocyte | 2.82e-09 | 12 |
mesenchymal stem cell of adipose | 3.85e-08 | 8 |
pericyte cell | 1.07e-07 | 4 |