FFCP PHASE1:Hg19::chr2:218771621..218771632,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:218771621..218771632,- | |||
|coexpression_cluster_id=C2667 | |coexpression_cluster_id=C2667 | ||
|description=CAGE_peak_at_chr2:218771621..218771632,- | |description=CAGE_peak_at_chr2:218771621..218771632,- | ||
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|ontology_enrichment_celltype=CL:0000766!3.59e-43!76;CL:0000839!3.26e-42!70;CL:0000557!1.76e-41!71;CL:0002194!4.24e-40!63;CL:0000576!4.24e-40!63;CL:0000040!4.24e-40!63;CL:0000559!4.24e-40!63;CL:0002057!1.31e-39!42;CL:0002009!1.38e-38!65;CL:0000860!1.91e-36!45;CL:0000763!6.07e-26!112;CL:0000049!6.07e-26!112;CL:0002031!8.05e-21!124;CL:0000738!6.92e-20!140;CL:0002087!3.62e-18!119;CL:0002032!2.62e-15!165;CL:0000837!2.62e-15!165;CL:0000037!2.84e-14!172;CL:0000566!2.84e-14!172;CL:0000988!6.16e-13!182;CL:0002619!7.81e-10!3 | |ontology_enrichment_celltype=CL:0000766!3.59e-43!76;CL:0000839!3.26e-42!70;CL:0000557!1.76e-41!71;CL:0002194!4.24e-40!63;CL:0000576!4.24e-40!63;CL:0000040!4.24e-40!63;CL:0000559!4.24e-40!63;CL:0002057!1.31e-39!42;CL:0002009!1.38e-38!65;CL:0000860!1.91e-36!45;CL:0000763!6.07e-26!112;CL:0000049!6.07e-26!112;CL:0002031!8.05e-21!124;CL:0000738!6.92e-20!140;CL:0002087!3.62e-18!119;CL:0002032!2.62e-15!165;CL:0000837!2.62e-15!165;CL:0000037!2.84e-14!172;CL:0000566!2.84e-14!172;CL:0000988!6.16e-13!182;CL:0002619!7.81e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.72e-66;33!CL:0002057;2.72e-66;33!CL:0000473;1.11e-49;39!CL:0000234;1.11e-49;39!CL:0000576;2.03e-48;48!CL:0002619;2.05e-32;3!CL:0000766;1.82e-29;69!CL:0002087;2.96e-13;104!CL:0000763;1.23e-12;100!CL:0000738;2.88e-10;136 | |ontology_enrichment_celltype_v019=CL:0000860;2.72e-66;33!CL:0002057;2.72e-66;33!CL:0000473;1.11e-49;39!CL:0000234;1.11e-49;39!CL:0000576;2.03e-48;48!CL:0002619;2.05e-32;3!CL:0000766;1.82e-29;69!CL:0002087;2.96e-13;104!CL:0000763;1.23e-12;100!CL:0000738;2.88e-10;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.65e-60,59;CL:0000576,1.65e-60,59;CL:0000040,1.65e-60,59;CL:0000559,1.65e-60,59;CL:0002009,1.73e-58,61;CL:0000839,5.76e-54,66;CL:0000860,8.32e-54,42;CL:0002057,8.32e-54,42;CL:0000473,2.45e-53,48;CL:0000234,2.45e-53,48;CL:0000557,3.85e-53,67;CL:0000766,2.35e-49,72;CL:0002619,1.41e-32,3;CL:0000763,2.52e-32,108;CL:0000049,2.52e-32,108;CL:0002087,3.08e-30,115;CL:0002031,6.78e-29,120;CL:0000738,2.99e-25,136;CL:0002032,5.42e-21,161;CL:0000837,5.42e-21,161;CL:0000037,5.03e-20,168;CL:0000988,6.84e-19,177;CL:0000134,3.33e-08,354;CL:0002320,5.41e-08,361;CL:0000219,2.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.43e-36;42!CL:0000049;3.17e-13;108 | |ontology_enrichment_development_v019=CL:0002057;3.43e-36;42!CL:0000049;3.17e-13;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.06e-35!80;UBERON:0001474!1.61e-32!86;UBERON:0004765!6.96e-28!101;UBERON:0001434!6.96e-28!101;UBERON:0002390!1.95e-27!102;UBERON:0003061!1.95e-27!102;UBERON:0002193!4.38e-24!112;UBERON:0002405!3.41e-23!115;UBERON:0002204!6.72e-15!167;UBERON:0003081!2.63e-12!216;UBERON:0007023!1.12e-09!115;UBERON:0003978!1.24e-08!3;UBERON:0009751!1.24e-08!3;UBERON:0000946!1.24e-08!3;UBERON:0002523!1.24e-08!3;UBERON:0005983!1.24e-08!3;UBERON:0002165!1.24e-08!3;UBERON:0002062!1.24e-08!3;UBERON:0007280!1.24e-08!3;UBERON:0000062!8.98e-07!511;UBERON:0000926!9.49e-07!448;UBERON:0004120!9.49e-07!448;UBERON:0006603!9.49e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!1.06e-35!80;UBERON:0001474!1.61e-32!86;UBERON:0004765!6.96e-28!101;UBERON:0001434!6.96e-28!101;UBERON:0002390!1.95e-27!102;UBERON:0003061!1.95e-27!102;UBERON:0002193!4.38e-24!112;UBERON:0002405!3.41e-23!115;UBERON:0002204!6.72e-15!167;UBERON:0003081!2.63e-12!216;UBERON:0007023!1.12e-09!115;UBERON:0003978!1.24e-08!3;UBERON:0009751!1.24e-08!3;UBERON:0000946!1.24e-08!3;UBERON:0002523!1.24e-08!3;UBERON:0005983!1.24e-08!3;UBERON:0002165!1.24e-08!3;UBERON:0002062!1.24e-08!3;UBERON:0007280!1.24e-08!3;UBERON:0000062!8.98e-07!511;UBERON:0000926!9.49e-07!448;UBERON:0004120!9.49e-07!448;UBERON:0006603!9.49e-07!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-46,76;UBERON:0001474,3.79e-43,82;UBERON:0004765,3.67e-39,90;UBERON:0002405,7.68e-38,93;UBERON:0002390,8.11e-36,98;UBERON:0003061,8.11e-36,98;UBERON:0001434,4.60e-35,100;UBERON:0002193,2.52e-32,108;UBERON:0002204,3.70e-20,167;UBERON:0003081,3.56e-16,203;UBERON:0000926,1.52e-09,315;UBERON:0004120,1.52e-09,315;UBERON:0006603,1.52e-09,315;UBERON:0002384,1.05e-07,371 | |||
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| ||
|short_description=p@chr2:218771621..218771632,- | |short_description=p@chr2:218771621..218771632,- | ||
}} | }} |
Latest revision as of 06:32, 29 July 2015
Short description: | p@chr2:218771621..218771632, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:218771621..218771632, - |
Coexpression cluster: | C2667_CD14_acute_Macrophage_immature_Monocytederived_Mast_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.65e-60 | 59 |
monocyte | 1.65e-60 | 59 |
monoblast | 1.65e-60 | 59 |
promonocyte | 1.65e-60 | 59 |
macrophage dendritic cell progenitor | 1.73e-58 | 61 |
myeloid lineage restricted progenitor cell | 5.76e-54 | 66 |
classical monocyte | 8.32e-54 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.32e-54 | 42 |
defensive cell | 2.45e-53 | 48 |
phagocyte | 2.45e-53 | 48 |
granulocyte monocyte progenitor cell | 3.85e-53 | 67 |
myeloid leukocyte | 2.35e-49 | 72 |
adult endothelial progenitor cell | 1.41e-32 | 3 |
myeloid cell | 2.52e-32 | 108 |
common myeloid progenitor | 2.52e-32 | 108 |
nongranular leukocyte | 3.08e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 6.78e-29 | 120 |
leukocyte | 2.99e-25 | 136 |
hematopoietic oligopotent progenitor cell | 5.42e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.42e-21 | 161 |
hematopoietic stem cell | 5.03e-20 | 168 |
hematopoietic cell | 6.84e-19 | 177 |
mesenchymal cell | 3.33e-08 | 354 |
connective tissue cell | 5.41e-08 | 361 |
motile cell | 2.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-46 | 76 |
bone element | 3.79e-43 | 82 |
skeletal element | 3.67e-39 | 90 |
immune system | 7.68e-38 | 93 |
hematopoietic system | 8.11e-36 | 98 |
blood island | 8.11e-36 | 98 |
skeletal system | 4.60e-35 | 100 |
hemolymphoid system | 2.52e-32 | 108 |
musculoskeletal system | 3.70e-20 | 167 |
lateral plate mesoderm | 3.56e-16 | 203 |
mesoderm | 1.52e-09 | 315 |
mesoderm-derived structure | 1.52e-09 | 315 |
presumptive mesoderm | 1.52e-09 | 315 |
connective tissue | 1.05e-07 | 371 |