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FFCP PHASE1:Hg19::chr20:49347538..49347547,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr20:49347538..49347547,-
|coexpression_cluster_id=C194
|coexpression_cluster_id=C194
|description=CAGE_peak_at_chr20:49347538..49347547,-
|description=CAGE_peak_at_chr20:49347538..49347547,-
Line 9: Line 14:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0000239;4.09e-23;3!CL:1000615;4.09e-23;3!CL:0002306;4.09e-23;3!CL:1000507;6.56e-08;10!CL:1000494;6.56e-08;10!CL:0002681;8.38e-07;12!CL:0002584;8.38e-07;12
|ontology_enrichment_celltype_v019=CL:0000239;4.09e-23;3!CL:1000615;4.09e-23;3!CL:0002306;4.09e-23;3!CL:1000507;6.56e-08;10!CL:1000494;6.56e-08;10!CL:0002681;8.38e-07;12!CL:0002584;8.38e-07;12
|ontology_enrichment_celltype_v019_2=CL:0000239,4.09e-23,3;CL:1000615,4.09e-23,3;CL:0002306,4.09e-23,3;CL:1000507,6.56e-08,10;CL:1000494,6.56e-08,10;CL:0002681,8.38e-07,12;CL:0002584,8.38e-07,12
|ontology_enrichment_development_v019=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:5093!1.50e-08!4;DOID:1612!1.50e-08!4
|ontology_enrichment_disease=DOID:5093!1.50e-08!4;DOID:1612!1.50e-08!4
|ontology_enrichment_disease_v019=DOID:5093;2.40e-66;4!DOID:1612;2.40e-66;4!DOID:299;1.03e-11;25!DOID:7;2.44e-07;39
|ontology_enrichment_disease_v019=DOID:5093;2.40e-66;4!DOID:1612;2.40e-66;4!DOID:299;1.03e-11;25!DOID:7;2.44e-07;39
|ontology_enrichment_disease_v019_2=DOID:5093,2.40e-66,4;DOID:1612,2.40e-66,4;DOID:299,1.03e-11,25;DOID:7,6.60e-08,39
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=UBERON:0000310;2.08e-27;10!UBERON:0001443;4.86e-25;11!UBERON:0006853;4.09e-23;3!UBERON:0007685;4.09e-23;3!UBERON:0004134;4.09e-23;3!UBERON:0004211;6.56e-08;10!UBERON:0009773;6.56e-08;10!UBERON:0001231;6.56e-08;10!UBERON:0004810;6.56e-08;10!UBERON:0000915;4.34e-07;52!UBERON:0001225;8.38e-07;12!UBERON:0008987;8.38e-07;12
|ontology_enrichment_uberon_v019=UBERON:0000310;2.08e-27;10!UBERON:0001443;4.86e-25;11!UBERON:0006853;4.09e-23;3!UBERON:0007685;4.09e-23;3!UBERON:0004134;4.09e-23;3!UBERON:0004211;6.56e-08;10!UBERON:0009773;6.56e-08;10!UBERON:0001231;6.56e-08;10!UBERON:0004810;6.56e-08;10!UBERON:0000915;4.34e-07;52!UBERON:0001225;8.38e-07;12!UBERON:0008987;8.38e-07;12
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.08e-27,10;UBERON:0001443,4.86e-25,11;UBERON:0006853,4.09e-23,3;UBERON:0007685,4.09e-23,3;UBERON:0004134,4.09e-23,3;UBERON:0004810,6.56e-08,10;UBERON:0001225,8.38e-07,12;UBERON:0008987,8.38e-07,12
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,19.7551099489819,20.6036678902769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0.0967563312890851,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.164831716762333,0,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0.126166424835079,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233
|short_description=p@chr20:49347538..49347547,-
|short_description=p@chr20:49347538..49347547,-
}}
}}

Latest revision as of 15:16, 28 July 2015

Short description:p@chr20:49347538..49347547, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr20:49347538..49347547, -
Coexpression cluster:C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data