FFCP PHASE1:Hg19::chr20:52185447..52185462,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:52185447..52185462,-
|short_description=p2@ZNF217
|description=CAGE_peak_2_at_ZNF217_5end
|association_with_transcript=-96bp_to_BC039055_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7764 | |EntrezGene=7764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=13009 | |HGNC=13009 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-96bp_to_BC039055_5end | |||
|cluster_id=chr20:52185447..52185462,- | |||
|description=CAGE_peak_2_at_ZNF217_5end | |||
|id=chr20:52185447..52185462,- | |||
|ontology_enrichment_celltype=CL:0002087!1.76e-21!119;CL:0002031!1.05e-20!124;CL:0000738!5.97e-19!140;CL:0002032!1.63e-16!165;CL:0000837!1.63e-16!165;CL:0002009!4.35e-16!65;CL:0002194!2.08e-15!63;CL:0000576!2.08e-15!63;CL:0000040!2.08e-15!63;CL:0000559!2.08e-15!63;CL:0000037!3.39e-15!172;CL:0000566!3.39e-15!172;CL:0002057!1.05e-14!42;CL:0000860!1.09e-13!45;CL:0000557!2.72e-13!71;CL:0000988!2.96e-13!182;CL:0000839!4.17e-13!70;CL:0000766!1.02e-11!76;CL:0000763!3.59e-09!112;CL:0000049!3.59e-09!112;CL:0000542!5.95e-08!53;CL:0000051!5.95e-08!53;CL:0000838!1.64e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.40e-18;33!CL:0002057;4.40e-18;33!CL:0000473;9.00e-16;39!CL:0000234;9.00e-16;39!CL:0000576;5.90e-10;48!CL:0000766;1.51e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,7.35e-24,115;CL:0002031,2.41e-22,120;CL:0000738,1.27e-21,136;CL:0002009,4.03e-20,61;CL:0002194,3.71e-19,59;CL:0000576,3.71e-19,59;CL:0000040,3.71e-19,59;CL:0000559,3.71e-19,59;CL:0000473,3.85e-19,48;CL:0000234,3.85e-19,48;CL:0002032,3.86e-18,161;CL:0000837,3.86e-18,161;CL:0000860,4.01e-18,42;CL:0002057,4.01e-18,42;CL:0000037,7.04e-17,168;CL:0000557,9.42e-17,67;CL:0000839,2.32e-15,66;CL:0000988,5.03e-15,177;CL:0000766,7.25e-15,72;CL:0000763,6.29e-11,108;CL:0000049,6.29e-11,108;CL:0000542,1.55e-07,53;CL:0000051,1.55e-07,53;CL:0000838,5.35e-07,52;CL:0000134,8.16e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;8.99e-13;42 | |||
|ontology_enrichment_disease=DOID:162!9.69e-09!235;DOID:14566!1.88e-08!239;DOID:0050687!2.80e-07!143;DOID:7!5.27e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:7;3.26e-07;39!DOID:299;9.25e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.30e-07,39;DOID:162,3.03e-07,235;DOID:0050687,3.36e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.15e-10!102;UBERON:0003061!9.15e-10!102;UBERON:0002371!9.52e-10!80;UBERON:0001474!1.23e-08!86;UBERON:0002193!5.05e-08!112;UBERON:0004765!3.36e-07!101;UBERON:0001434!3.36e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.32e-14,76;UBERON:0002390,1.84e-13,98;UBERON:0003061,1.84e-13,98;UBERON:0001474,3.07e-12,82;UBERON:0002193,3.64e-11,108;UBERON:0002405,8.88e-11,93;UBERON:0004765,9.19e-10,90;UBERON:0001434,7.96e-08,100 | |||
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| ||
|short_description=p2@ZNF217 | |||
}} | }} |
Latest revision as of 01:08, 17 September 2015
Short description: | p2@ZNF217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZNF217_5end |
Coexpression cluster: | NA |
Association with transcript: | -96bp_to_BC039055_5end |
EntrezGene: | ZNF217 |
HGNC: | 13009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 7.35e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 2.41e-22 | 120 |
leukocyte | 1.27e-21 | 136 |
macrophage dendritic cell progenitor | 4.03e-20 | 61 |
monopoietic cell | 3.71e-19 | 59 |
monocyte | 3.71e-19 | 59 |
monoblast | 3.71e-19 | 59 |
promonocyte | 3.71e-19 | 59 |
defensive cell | 3.85e-19 | 48 |
phagocyte | 3.85e-19 | 48 |
hematopoietic oligopotent progenitor cell | 3.86e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.86e-18 | 161 |
classical monocyte | 4.01e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.01e-18 | 42 |
hematopoietic stem cell | 7.04e-17 | 168 |
granulocyte monocyte progenitor cell | 9.42e-17 | 67 |
myeloid lineage restricted progenitor cell | 2.32e-15 | 66 |
hematopoietic cell | 5.03e-15 | 177 |
myeloid leukocyte | 7.25e-15 | 72 |
myeloid cell | 6.29e-11 | 108 |
common myeloid progenitor | 6.29e-11 | 108 |
lymphocyte | 1.55e-07 | 53 |
common lymphoid progenitor | 1.55e-07 | 53 |
lymphoid lineage restricted progenitor cell | 5.35e-07 | 52 |
mesenchymal cell | 8.16e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.32e-14 | 76 |
hematopoietic system | 1.84e-13 | 98 |
blood island | 1.84e-13 | 98 |
bone element | 3.07e-12 | 82 |
hemolymphoid system | 3.64e-11 | 108 |
immune system | 8.88e-11 | 93 |
skeletal element | 9.19e-10 | 90 |
skeletal system | 7.96e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.30e-07 | 39 |
cancer | 3.03e-07 | 235 |
cell type cancer | 3.36e-07 | 143 |