FFCP PHASE1:Hg19::chr20:9495410..9495426,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:9495410..9495426,+
|short_description=p5@LAMP5
|description=CAGE_peak_5_at_LAMP5_5end
|association_with_transcript=139bp_to_ENST00000427562,uc002wni.1,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=139bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | |||
|cluster_id=chr20:9495410..9495426,+ | |||
|coexpression_cluster_id=C1485 | |||
|description=CAGE_peak_5_at_LAMP5_5end | |||
|id=chr20:9495410..9495426,+ | |||
|ontology_enrichment_celltype=CL:0002322!8.56e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.68e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.47e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.37e-14;82!UBERON:0006215;1.19e-08;3!UBERON:0010122;1.53e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;3.95e-48;32!UBERON:0003528;6.38e-48;34!UBERON:0002020;6.38e-48;34!UBERON:0002619;7.41e-46;22!UBERON:0002791;8.55e-45;32!UBERON:0001893;1.12e-44;34!UBERON:0001950;7.99e-41;20!UBERON:0000956;6.52e-40;25!UBERON:0000203;6.52e-40;25!UBERON:0000073;6.24e-35;53!UBERON:0002616;6.24e-35;53!UBERON:0002780;2.43e-34;41!UBERON:0001890;2.43e-34;41!UBERON:0000955;1.39e-25;68!UBERON:0001017;3.29e-25;75!UBERON:0001016;1.22e-19;83!UBERON:0004733;3.70e-17;12!UBERON:0002028;3.70e-17;12!UBERON:0000200;4.43e-17;6!UBERON:0002298;1.62e-16;6!UBERON:0002420;1.82e-16;9!UBERON:0007245;1.82e-16;9!UBERON:0010009;1.82e-16;9!UBERON:0010011;1.82e-16;9!UBERON:0000454;1.82e-16;9!UBERON:0000125;3.72e-16;9!UBERON:0002308;3.72e-16;9!UBERON:0004732;1.05e-15;13!UBERON:0000349;7.35e-15;5!UBERON:0001872;3.62e-14;5!UBERON:0000369;2.05e-13;4!UBERON:0002435;2.05e-13;4!UBERON:0000204;2.05e-13;4!UBERON:0009663;1.68e-11;7!UBERON:0007023;3.15e-11;114!UBERON:0002680;1.08e-10;9!UBERON:0001895;1.08e-10;9!UBERON:0005383;1.57e-10;3!UBERON:0005382;1.57e-10;3!UBERON:0001871;2.24e-10;6!UBERON:0002021;6.34e-10;5!UBERON:0000988;1.94e-09;3!UBERON:0001870;2.00e-09;3!UBERON:0001896;8.78e-09;3!UBERON:0005290;8.78e-09;3!UBERON:0011216;5.68e-08;132!UBERON:0001873;1.53e-07;2!UBERON:0001876;6.22e-07;2!UBERON:0002702;7.98e-07;2 | |||
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| ||
|short_description=p5@LAMP5 | |||
}} | }} |
Latest revision as of 17:36, 17 September 2015
Short description: | p5@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LAMP5_5end |
Coexpression cluster: | C1485_myeloma_putamen_caudate_nucleus_Dendritic_pons_Lymphatic |
Association with transcript: | 139bp_to_ENST00000427562, uc002wni.1, uc010zrc.1_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.47e-10 | 3 |