FFCP PHASE1:Hg19::chr14:51955719..51955733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-84bp_to_ENST00000556137_5end | |association_with_transcript=-84bp_to_ENST00000556137_5end | ||
|cluster_id=chr14:51955719..51955733,+ | |||
|coexpression_cluster_id=C362 | |coexpression_cluster_id=C362 | ||
|description=CAGE_peak_15_at_FRMD6_5end | |description=CAGE_peak_15_at_FRMD6_5end | ||
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|ontology_enrichment_celltype=CL:0002076!1.34e-29!43;CL:0000223!9.41e-22!59;CL:0002251!1.64e-17!21;CL:0000066!4.23e-17!254;CL:0002368!3.23e-16!13;CL:0000076!1.98e-13!62;CL:0000244!1.14e-12!4;CL:0000731!1.14e-12!4;CL:0002621!2.75e-10!3;CL:0002159!5.58e-10!13;CL:0000068!3.99e-09!3;CL:0000069!3.99e-09!3;CL:0000307!3.99e-09!3;CL:0000377!3.99e-09!3;CL:0000622!8.05e-09!5;CL:0002202!1.73e-07!9;CL:0002632!1.73e-07!9;CL:0000154!2.35e-07!6;CL:0002327!5.25e-07!4 | |ontology_enrichment_celltype=CL:0002076!1.34e-29!43;CL:0000223!9.41e-22!59;CL:0002251!1.64e-17!21;CL:0000066!4.23e-17!254;CL:0002368!3.23e-16!13;CL:0000076!1.98e-13!62;CL:0000244!1.14e-12!4;CL:0000731!1.14e-12!4;CL:0002621!2.75e-10!3;CL:0002159!5.58e-10!13;CL:0000068!3.99e-09!3;CL:0000069!3.99e-09!3;CL:0000307!3.99e-09!3;CL:0000377!3.99e-09!3;CL:0000622!8.05e-09!5;CL:0002202!1.73e-07!9;CL:0002632!1.73e-07!9;CL:0000154!2.35e-07!6;CL:0002327!5.25e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.76e-22;42!CL:0000244;9.76e-21;4!CL:0000731;9.76e-21;4!CL:0002621;9.80e-17;3!CL:0002251;1.55e-15;20!CL:0002368;2.04e-13;13!CL:0002166;4.99e-08;3!CL:0002231;2.05e-07;3!CL:0000307;2.05e-07;3!CL:0002336;9.29e-07;1!CL:0002261;9.29e-07;1!CL:0002170;9.29e-07;1 | |ontology_enrichment_celltype_v019=CL:0002076;1.76e-22;42!CL:0000244;9.76e-21;4!CL:0000731;9.76e-21;4!CL:0002621;9.80e-17;3!CL:0002251;1.55e-15;20!CL:0002368;2.04e-13;13!CL:0002166;4.99e-08;3!CL:0002231;2.05e-07;3!CL:0000307;2.05e-07;3!CL:0002336;9.29e-07;1!CL:0002261;9.29e-07;1!CL:0002170;9.29e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.20e-27,42;CL:0000244,7.03e-21,4;CL:0000731,7.03e-21,4;CL:0000223,7.63e-19,58;CL:0000066,1.14e-17,253;CL:0002621,9.83e-17,3;CL:0002251,1.70e-15,20;CL:0002368,2.89e-13,13;CL:0000076,6.72e-11,63;CL:0002166,4.82e-08,3;CL:0002231,1.53e-07,3;CL:0000068,2.27e-07,3;CL:0000069,2.27e-07,3;CL:0000307,2.27e-07,3;CL:0000377,2.27e-07,3;CL:0002336,8.81e-07,1;CL:0002261,8.81e-07,1;CL:0002170,8.81e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000223;1.42e-10;58!CL:0000377;2.05e-07;3 | |ontology_enrichment_development_v019=CL:0000223;1.42e-10;58!CL:0000377;2.05e-07;3 | ||
|ontology_enrichment_disease=DOID:1749!3.46e-28!14 | |ontology_enrichment_disease=DOID:1749!3.46e-28!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-34;14 | |ontology_enrichment_disease_v019=DOID:1749;1.86e-34;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,2.01e-34,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!2.50e-24!35;UBERON:0000166!4.29e-20!21;UBERON:0001004!1.60e-19!72;UBERON:0004119!2.03e-17!169;UBERON:0000925!2.03e-17!169;UBERON:0006595!2.03e-17!169;UBERON:0000165!6.91e-17!28;UBERON:0000930!6.91e-17!28;UBERON:0000365!1.98e-15!5;UBERON:0003729!2.10e-15!5;UBERON:0003102!1.57e-14!95;UBERON:0000974!5.82e-13!10;UBERON:0005910!8.73e-13!6;UBERON:0003343!1.67e-12!4;UBERON:0004785!1.67e-12!4;UBERON:0000344!1.73e-11!12;UBERON:0006562!4.63e-11!11;UBERON:0000065!6.19e-11!53;UBERON:0001007!7.25e-11!155;UBERON:0001555!7.25e-11!155;UBERON:0007026!7.25e-11!155;UBERON:0001949!2.75e-10!3;UBERON:0001444!9.14e-10!48;UBERON:0001042!4.52e-09!10;UBERON:0009145!4.52e-09!10;UBERON:0001723!5.27e-09!3;UBERON:0001033!5.27e-09!3;UBERON:0010056!5.27e-09!3;UBERON:0004921!1.74e-07!129;UBERON:0004185!1.74e-07!129;UBERON:0000072!3.95e-07!46;UBERON:0001911!5.25e-07!4;UBERON:0005333!5.25e-07!4;UBERON:0008425!5.25e-07!4;UBERON:0005311!5.25e-07!4;UBERON:0000077!9.89e-07!130 | |ontology_enrichment_uberon=UBERON:0000161!2.50e-24!35;UBERON:0000166!4.29e-20!21;UBERON:0001004!1.60e-19!72;UBERON:0004119!2.03e-17!169;UBERON:0000925!2.03e-17!169;UBERON:0006595!2.03e-17!169;UBERON:0000165!6.91e-17!28;UBERON:0000930!6.91e-17!28;UBERON:0000365!1.98e-15!5;UBERON:0003729!2.10e-15!5;UBERON:0003102!1.57e-14!95;UBERON:0000974!5.82e-13!10;UBERON:0005910!8.73e-13!6;UBERON:0003343!1.67e-12!4;UBERON:0004785!1.67e-12!4;UBERON:0000344!1.73e-11!12;UBERON:0006562!4.63e-11!11;UBERON:0000065!6.19e-11!53;UBERON:0001007!7.25e-11!155;UBERON:0001555!7.25e-11!155;UBERON:0007026!7.25e-11!155;UBERON:0001949!2.75e-10!3;UBERON:0001444!9.14e-10!48;UBERON:0001042!4.52e-09!10;UBERON:0009145!4.52e-09!10;UBERON:0001723!5.27e-09!3;UBERON:0001033!5.27e-09!3;UBERON:0010056!5.27e-09!3;UBERON:0004921!1.74e-07!129;UBERON:0004185!1.74e-07!129;UBERON:0000072!3.95e-07!46;UBERON:0001911!5.25e-07!4;UBERON:0005333!5.25e-07!4;UBERON:0008425!5.25e-07!4;UBERON:0005311!5.25e-07!4;UBERON:0000077!9.89e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.41e-26;12!UBERON:0000365;1.65e-25;5!UBERON:0003729;1.38e-24;13!UBERON:0005910;3.13e-21;6!UBERON:0003343;1.03e-20;4!UBERON:0004785;1.03e-20;4!UBERON:0000344;1.29e-19;20!UBERON:0001949;9.80e-17;3!UBERON:0000974;7.28e-14;6!UBERON:0000161;1.47e-12;19!UBERON:0000166;1.47e-12;19!UBERON:0003350;8.25e-11;8!UBERON:0000165;9.87e-11;28!UBERON:0005911;3.32e-10;36!UBERON:0003929;2.02e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000486;1.41e-26;12!UBERON:0000365;1.65e-25;5!UBERON:0003729;1.38e-24;13!UBERON:0005910;3.13e-21;6!UBERON:0003343;1.03e-20;4!UBERON:0004785;1.03e-20;4!UBERON:0000344;1.29e-19;20!UBERON:0001949;9.80e-17;3!UBERON:0000974;7.28e-14;6!UBERON:0000161;1.47e-12;19!UBERON:0000166;1.47e-12;19!UBERON:0003350;8.25e-11;8!UBERON:0000165;9.87e-11;28!UBERON:0005911;3.32e-10;36!UBERON:0003929;2.02e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.07e-25,5;UBERON:0003729,1.60e-24,13;UBERON:0005910,2.19e-21,6;UBERON:0003343,1.36e-20,4;UBERON:0004785,1.36e-20,4;UBERON:0000344,1.36e-19,20;UBERON:0001949,9.83e-17,3;UBERON:0000161,2.07e-12,36;UBERON:0004119,1.36e-11,160;UBERON:0000925,1.36e-11,160;UBERON:0006595,1.36e-11,160;UBERON:0003350,7.85e-11,8;UBERON:0000166,1.11e-10,22;UBERON:0001004,1.73e-10,74;UBERON:0000165,2.72e-10,29;UBERON:0000930,2.72e-10,29;UBERON:0003102,9.57e-10,99;UBERON:0000974,2.62e-08,10;UBERON:0000033,1.76e-07,56 | |||
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| ||
|short_description=p15@FRMD6 | |short_description=p15@FRMD6 | ||
}} | }} |
Latest revision as of 04:45, 20 September 2015
Short description: | p15@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_FRMD6_5end |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | -84bp_to_ENST00000556137_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.20e-27 | 42 |
transitional epithelial cell | 7.03e-21 | 4 |
urothelial cell | 7.03e-21 | 4 |
endodermal cell | 7.63e-19 | 58 |
epithelial cell | 1.14e-17 | 253 |
gingival epithelial cell | 9.83e-17 | 3 |
epithelial cell of alimentary canal | 1.70e-15 | 20 |
respiratory epithelial cell | 2.89e-13 | 13 |
squamous epithelial cell | 6.72e-11 | 63 |
epithelial cell of Malassez | 4.82e-08 | 3 |
epithelial cell of prostate | 1.53e-07 | 3 |
duct epithelial cell | 2.27e-07 | 3 |
branched duct epithelial cell | 2.27e-07 | 3 |
tracheal epithelial cell | 2.27e-07 | 3 |
tracheoblast | 2.27e-07 | 3 |
buccal mucosa cell | 8.81e-07 | 1 |
endothelial cell of viscerocranial mucosa | 8.81e-07 | 1 |
keratinized cell of the oral mucosa | 8.81e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.07e-25 | 5 |
mouth mucosa | 1.60e-24 | 13 |
transitional epithelium | 2.19e-21 | 6 |
mucosa of oral region | 1.36e-20 | 4 |
respiratory system mucosa | 1.36e-20 | 4 |
mucosa | 1.36e-19 | 20 |
gingival epithelium | 9.83e-17 | 3 |
orifice | 2.07e-12 | 36 |
endoderm-derived structure | 1.36e-11 | 160 |
endoderm | 1.36e-11 | 160 |
presumptive endoderm | 1.36e-11 | 160 |
epithelium of mucosa | 7.85e-11 | 8 |
oral opening | 1.11e-10 | 22 |
respiratory system | 1.73e-10 | 74 |
mouth | 2.72e-10 | 29 |
stomodeum | 2.72e-10 | 29 |
surface structure | 9.57e-10 | 99 |
neck | 2.62e-08 | 10 |
head | 1.76e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.01e-34 | 14 |